@jbrowse/plugin-data-management 1.7.0 → 1.7.4

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (97) hide show
  1. package/dist/AddConnectionWidget/components/AddConnectionWidget.d.ts +9 -9
  2. package/dist/AddConnectionWidget/components/AddConnectionWidget.js +17 -17
  3. package/dist/AddConnectionWidget/components/AddConnectionWidget.test.js +7 -7
  4. package/dist/AddConnectionWidget/components/ConfigureConnection.d.ts +2 -2
  5. package/dist/AddConnectionWidget/components/ConfigureConnection.js +6 -6
  6. package/dist/AddConnectionWidget/components/ConnectionTypeSelect.d.ts +8 -8
  7. package/dist/AddConnectionWidget/components/ConnectionTypeSelect.js +8 -8
  8. package/dist/AddConnectionWidget/index.d.ts +2 -2
  9. package/dist/AddConnectionWidget/index.js +1 -1
  10. package/dist/AddConnectionWidget/model.d.ts +5 -5
  11. package/dist/AddConnectionWidget/model.js +2 -2
  12. package/dist/AddTrackWidget/components/AddTrackWidget.d.ts +7 -7
  13. package/dist/AddTrackWidget/components/AddTrackWidget.js +20 -20
  14. package/dist/AddTrackWidget/components/AddTrackWidget.test.js +7 -7
  15. package/dist/AddTrackWidget/components/ConfirmTrack.d.ts +7 -7
  16. package/dist/AddTrackWidget/components/ConfirmTrack.js +28 -28
  17. package/dist/AddTrackWidget/components/TrackSourceSelect.d.ts +7 -7
  18. package/dist/AddTrackWidget/components/TrackSourceSelect.js +6 -6
  19. package/dist/AddTrackWidget/index.d.ts +2 -2
  20. package/dist/AddTrackWidget/index.js +1 -1
  21. package/dist/AddTrackWidget/index.test.js +13 -13
  22. package/dist/AddTrackWidget/model.d.ts +42 -42
  23. package/dist/AddTrackWidget/model.js +2 -2
  24. package/dist/AssemblyManager/AssemblyAddForm.d.ts +6 -6
  25. package/dist/AssemblyManager/AssemblyAddForm.js +36 -36
  26. package/dist/AssemblyManager/AssemblyEditor.d.ts +5 -5
  27. package/dist/AssemblyManager/AssemblyEditor.js +3 -3
  28. package/dist/AssemblyManager/AssemblyManager.d.ts +6 -6
  29. package/dist/AssemblyManager/AssemblyManager.js +18 -18
  30. package/dist/AssemblyManager/AssemblyManager.test.js +6 -6
  31. package/dist/AssemblyManager/AssemblyTable.d.ts +13 -13
  32. package/dist/AssemblyManager/AssemblyTable.js +15 -15
  33. package/dist/AssemblyManager/index.d.ts +1 -1
  34. package/dist/AssemblyManager/index.js +1 -1
  35. package/dist/HierarchicalTrackSelectorWidget/components/CloseConnectionDialog.d.ts +7 -7
  36. package/dist/HierarchicalTrackSelectorWidget/components/CloseConnectionDialog.js +8 -8
  37. package/dist/HierarchicalTrackSelectorWidget/components/DeleteConnectionDialog.d.ts +13 -13
  38. package/dist/HierarchicalTrackSelectorWidget/components/DeleteConnectionDialog.js +5 -5
  39. package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.d.ts +6 -6
  40. package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +58 -58
  41. package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.test.js +10 -10
  42. package/dist/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.d.ts +9 -9
  43. package/dist/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.js +11 -11
  44. package/dist/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.d.ts +10 -10
  45. package/dist/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.js +9 -9
  46. package/dist/HierarchicalTrackSelectorWidget/index.d.ts +2 -2
  47. package/dist/HierarchicalTrackSelectorWidget/index.js +1 -1
  48. package/dist/HierarchicalTrackSelectorWidget/model.d.ts +37 -37
  49. package/dist/HierarchicalTrackSelectorWidget/model.js +8 -8
  50. package/dist/PluginStoreWidget/components/CustomPluginForm.d.ts +9 -9
  51. package/dist/PluginStoreWidget/components/CustomPluginForm.js +24 -24
  52. package/dist/PluginStoreWidget/components/InstalledPlugin.d.ts +11 -11
  53. package/dist/PluginStoreWidget/components/InstalledPlugin.js +14 -14
  54. package/dist/PluginStoreWidget/components/InstalledPluginsList.d.ts +9 -9
  55. package/dist/PluginStoreWidget/components/InstalledPluginsList.js +5 -5
  56. package/dist/PluginStoreWidget/components/PluginCard.d.ts +10 -10
  57. package/dist/PluginStoreWidget/components/PluginCard.js +13 -13
  58. package/dist/PluginStoreWidget/components/PluginStoreWidget.d.ts +7 -7
  59. package/dist/PluginStoreWidget/components/PluginStoreWidget.js +31 -31
  60. package/dist/PluginStoreWidget/components/PluginStoreWidget.test.js +13 -13
  61. package/dist/PluginStoreWidget/index.d.ts +3 -3
  62. package/dist/PluginStoreWidget/index.js +2 -2
  63. package/dist/PluginStoreWidget/model.d.ts +13 -13
  64. package/dist/PluginStoreWidget/model.js +1 -1
  65. package/dist/SetDefaultSession/SetDefaultSession.d.ts +6 -6
  66. package/dist/SetDefaultSession/SetDefaultSession.js +7 -7
  67. package/dist/SetDefaultSession/SetDefaultSession.test.js +3 -3
  68. package/dist/SetDefaultSession/index.d.ts +1 -1
  69. package/dist/SetDefaultSession/index.js +1 -1
  70. package/dist/index.d.ts +27 -27
  71. package/dist/index.js +15 -15
  72. package/dist/index.test.js +2 -2
  73. package/dist/ucsc-trackhub/configSchema.d.ts +2 -2
  74. package/dist/ucsc-trackhub/configSchema.js +2 -2
  75. package/dist/ucsc-trackhub/index.d.ts +2 -2
  76. package/dist/ucsc-trackhub/index.js +2 -2
  77. package/dist/ucsc-trackhub/model.d.ts +15 -4
  78. package/dist/ucsc-trackhub/model.js +7 -7
  79. package/dist/ucsc-trackhub/ucscAssemblies.d.ts +2 -2
  80. package/dist/ucsc-trackhub/ucscAssemblies.js +2 -2
  81. package/dist/ucsc-trackhub/ucscTrackHub.d.ts +6 -6
  82. package/dist/ucsc-trackhub/ucscTrackHub.js +9 -9
  83. package/package.json +5 -4
  84. package/dist/AddConnectionWidget/components/AddConnectionWidget.test.d.ts +0 -1
  85. package/dist/AddTrackWidget/components/AddTrackWidget.test.d.ts +0 -1
  86. package/dist/AddTrackWidget/index.test.d.ts +0 -1
  87. package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.test.d.ts +0 -1
  88. package/dist/HierarchicalTrackSelectorWidget/model.test.d.ts +0 -1
  89. package/dist/PluginStoreWidget/components/PluginStoreWidget.test.d.ts +0 -1
  90. package/dist/PluginStoreWidget/model.test.d.ts +0 -1
  91. package/dist/index.test.d.ts +0 -1
  92. package/dist/plugin-data-management.cjs.development.js +0 -4856
  93. package/dist/plugin-data-management.cjs.development.js.map +0 -1
  94. package/dist/plugin-data-management.cjs.production.min.js +0 -2
  95. package/dist/plugin-data-management.cjs.production.min.js.map +0 -1
  96. package/dist/plugin-data-management.esm.js +0 -4829
  97. package/dist/plugin-data-management.esm.js.map +0 -1
@@ -1,9 +1,9 @@
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- declare function _default({ model }: {
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- model: any;
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- }): JSX.Element;
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- declare namespace _default {
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- export namespace propTypes {
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- export const model: import("prop-types").Validator<any>;
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- }
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- }
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- export default _default;
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+ declare function _default({ model }: {
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+ model: any;
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+ }): JSX.Element;
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+ declare namespace _default {
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+ namespace propTypes {
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+ const model: import("prop-types").Validator<any>;
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+ }
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+ }
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+ export default _default;
@@ -7,7 +7,7 @@ var _typeof = require("@babel/runtime/helpers/typeof");
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  Object.defineProperty(exports, "__esModule", {
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  value: true
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  });
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- exports["default"] = void 0;
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+ exports.default = void 0;
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  var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/slicedToArray"));
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@@ -39,7 +39,7 @@ var _ConnectionTypeSelect = _interopRequireDefault(require("./ConnectionTypeSele
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40
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  function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
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- function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
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+ function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
43
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44
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  var useStyles = (0, _styles.makeStyles)(function (theme) {
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  return {
@@ -47,7 +47,7 @@ var useStyles = (0, _styles.makeStyles)(function (theme) {
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  marginTop: theme.spacing(1)
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  },
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  stepper: {
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- backgroundColor: theme.palette.background["default"]
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+ backgroundColor: theme.palette.background.default
51
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  },
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  button: {
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  marginTop: theme.spacing(1),
@@ -64,22 +64,22 @@ function AddConnectionWidget(_ref) {
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  var model = _ref.model;
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  var _useState = (0, _react.useState)({}),
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- _useState2 = (0, _slicedToArray2["default"])(_useState, 2),
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+ _useState2 = (0, _slicedToArray2.default)(_useState, 2),
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  connectionType = _useState2[0],
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  setConnectionType = _useState2[1];
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  var _useState3 = (0, _react.useState)({}),
72
- _useState4 = (0, _slicedToArray2["default"])(_useState3, 2),
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+ _useState4 = (0, _slicedToArray2.default)(_useState3, 2),
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  configModel = _useState4[0],
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  setConfigModel = _useState4[1];
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76
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  var _useState5 = (0, _react.useState)(true),
77
- _useState6 = (0, _slicedToArray2["default"])(_useState5, 2),
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+ _useState6 = (0, _slicedToArray2.default)(_useState5, 2),
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  configModelReady = _useState6[0],
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  setConfigModelReady = _useState6[1];
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81
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  var _useState7 = (0, _react.useState)(0),
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- _useState8 = (0, _slicedToArray2["default"])(_useState7, 2),
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+ _useState8 = (0, _slicedToArray2.default)(_useState7, 2),
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  activeStep = _useState8[0],
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  setActiveStep = _useState8[1];
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@@ -99,21 +99,21 @@ function AddConnectionWidget(_ref) {
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  function stepContent() {
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  switch (activeStep) {
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  case 0:
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- return /*#__PURE__*/_react["default"].createElement(_ConnectionTypeSelect["default"], {
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+ return /*#__PURE__*/_react.default.createElement(_ConnectionTypeSelect.default, {
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  connectionTypeChoices: pluginManager.getElementTypesInGroup('connection'),
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  connectionType: connectionType,
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  setConnectionType: handleSetConnectionType
106
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  });
107
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108
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  case 1:
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- return /*#__PURE__*/_react["default"].createElement(_ConfigureConnection["default"], {
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+ return /*#__PURE__*/_react.default.createElement(_ConfigureConnection.default, {
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  connectionType: connectionType,
111
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  model: configModel,
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  setModelReady: setConfigModelReady
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  });
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  default:
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- return /*#__PURE__*/_react["default"].createElement(_Typography["default"], null, "Unknown step");
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+ return /*#__PURE__*/_react.default.createElement(_Typography.default, null, "Unknown step");
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  }
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  }
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@@ -143,22 +143,22 @@ function AddConnectionWidget(_ref) {
143
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  return false;
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  }
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146
- return /*#__PURE__*/_react["default"].createElement("div", {
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+ return /*#__PURE__*/_react.default.createElement("div", {
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  className: classes.root
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- }, /*#__PURE__*/_react["default"].createElement(_Stepper["default"], {
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+ }, /*#__PURE__*/_react.default.createElement(_Stepper.default, {
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  className: classes.stepper,
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  activeStep: activeStep,
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  orientation: "vertical"
152
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  }, steps.map(function (label) {
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- return /*#__PURE__*/_react["default"].createElement(_Step["default"], {
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+ return /*#__PURE__*/_react.default.createElement(_Step.default, {
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  key: label
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- }, /*#__PURE__*/_react["default"].createElement(_StepLabel["default"], null, label), /*#__PURE__*/_react["default"].createElement(_StepContent["default"], null, stepContent(), /*#__PURE__*/_react["default"].createElement("div", {
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+ }, /*#__PURE__*/_react.default.createElement(_StepLabel.default, null, label), /*#__PURE__*/_react.default.createElement(_StepContent.default, null, stepContent(), /*#__PURE__*/_react.default.createElement("div", {
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  className: classes.actionsContainer
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- }, /*#__PURE__*/_react["default"].createElement(_Button["default"], {
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+ }, /*#__PURE__*/_react.default.createElement(_Button.default, {
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  disabled: activeStep === 0,
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  onClick: handleBack,
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  className: classes.button
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- }, "Back"), /*#__PURE__*/_react["default"].createElement(_Button["default"], {
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+ }, "Back"), /*#__PURE__*/_react.default.createElement(_Button.default, {
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  disabled: !checkNextEnabled(),
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  variant: "contained",
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  color: "primary",
@@ -175,4 +175,4 @@ AddConnectionWidget.propTypes = {
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176
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  var _default = (0, _mobxReact.observer)(AddConnectionWidget);
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178
- exports["default"] = _default;
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+ exports.default = _default;
@@ -48,17 +48,17 @@ describe('<AddConnectionWidget />', function () {
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  });
49
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  afterEach(_react.cleanup);
50
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  it('renders', function () {
51
- var _render = (0, _react.render)( /*#__PURE__*/_react2["default"].createElement(_AddConnectionWidget["default"], {
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+ var _render = (0, _react.render)( /*#__PURE__*/_react2.default.createElement(_AddConnectionWidget.default, {
52
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  model: model
53
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  })),
54
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  container = _render.container;
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56
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  expect(container.firstChild).toMatchSnapshot();
57
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  });
58
- it('can handle a custom UCSC trackHub URL', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
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+ it('can handle a custom UCSC trackHub URL', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
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  var mockFetch, _render2, findByTestId, getAllByRole, findAllByText, findByDisplayValue, ucscTrackHubSelection;
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61
- return _regenerator["default"].wrap(function _callee$(_context) {
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+ return _regenerator.default.wrap(function _callee$(_context) {
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  while (1) {
63
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  switch (_context.prev = _context.next) {
64
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  case 0:
@@ -80,7 +80,7 @@ describe('<AddConnectionWidget />', function () {
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  };
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82
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  jest.spyOn(global, 'fetch').mockImplementation(mockFetch);
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- _render2 = (0, _react.render)( /*#__PURE__*/_react2["default"].createElement(_AddConnectionWidget["default"], {
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+ _render2 = (0, _react.render)( /*#__PURE__*/_react2.default.createElement(_AddConnectionWidget.default, {
84
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  model: model
85
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  })), findByTestId = _render2.findByTestId, getAllByRole = _render2.getAllByRole, findAllByText = _render2.findAllByText, findByDisplayValue = _render2.findByDisplayValue;
86
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  expect(session.connections.length).toBe(0);
@@ -150,10 +150,10 @@ describe('<AddConnectionWidget />', function () {
150
150
  }
151
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  }, _callee);
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  })));
153
- it('can handle a custom JBrowse 1 data directory URL', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2() {
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+ it('can handle a custom JBrowse 1 data directory URL', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
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  var mockFetch, _render3, findByTestId, getAllByRole, findByPlaceholderText, findByText, findByDisplayValue;
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156
- return _regenerator["default"].wrap(function _callee2$(_context2) {
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+ return _regenerator.default.wrap(function _callee2$(_context2) {
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  while (1) {
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  switch (_context2.prev = _context2.next) {
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  case 0:
@@ -173,7 +173,7 @@ describe('<AddConnectionWidget />', function () {
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  };
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175
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  jest.spyOn(global, 'fetch').mockImplementation(mockFetch);
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- _render3 = (0, _react.render)( /*#__PURE__*/_react2["default"].createElement(_AddConnectionWidget["default"], {
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+ _render3 = (0, _react.render)( /*#__PURE__*/_react2.default.createElement(_AddConnectionWidget.default, {
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  model: model
178
178
  })), findByTestId = _render3.findByTestId, getAllByRole = _render3.getAllByRole, findByPlaceholderText = _render3.findByPlaceholderText, findByText = _render3.findByText, findByDisplayValue = _render3.findByDisplayValue;
179
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  expect(session.connections.length).toBe(0);
@@ -1,2 +1,2 @@
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- export default ConfigureConnection;
2
- declare function ConfigureConnection(props: any): JSX.Element;
1
+ export default ConfigureConnection;
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+ declare function ConfigureConnection(props: any): JSX.Element;
@@ -5,7 +5,7 @@ var _typeof = require("@babel/runtime/helpers/typeof");
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  Object.defineProperty(exports, "__esModule", {
6
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  value: true
7
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  });
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- exports["default"] = void 0;
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+ exports.default = void 0;
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10
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  var _react = _interopRequireWildcard(require("react"));
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@@ -15,16 +15,16 @@ var _mobxReact = require("mobx-react");
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16
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  function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
17
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18
- function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
18
+ function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
19
19
 
20
20
  var ConfigureConnection = (0, _mobxReact.observer)(function (props) {
21
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  var connectionType = props.connectionType,
22
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  model = props.model,
23
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  setModelReady = props.setModelReady;
24
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  var ConfigEditorComponent = connectionType.configEditorComponent || _pluginConfig.ConfigurationEditor;
25
- return /*#__PURE__*/_react["default"].createElement(_react.Suspense, {
26
- fallback: /*#__PURE__*/_react["default"].createElement("div", null, "Loading...")
27
- }, /*#__PURE__*/_react["default"].createElement(ConfigEditorComponent, {
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+ return /*#__PURE__*/_react.default.createElement(_react.Suspense, {
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+ fallback: /*#__PURE__*/_react.default.createElement("div", null, "Loading...")
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+ }, /*#__PURE__*/_react.default.createElement(ConfigEditorComponent, {
28
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  model: {
29
29
  target: model
30
30
  },
@@ -32,4 +32,4 @@ var ConfigureConnection = (0, _mobxReact.observer)(function (props) {
32
32
  }));
33
33
  });
34
34
  var _default = ConfigureConnection;
35
- exports["default"] = _default;
35
+ exports.default = _default;
@@ -1,8 +1,8 @@
1
- /// <reference types="react" />
2
- import ConnectionType from '@jbrowse/core/pluggableElementTypes/ConnectionType';
3
- declare function ConnectionTypeSelect(props: {
4
- connectionTypeChoices: ConnectionType[];
5
- connectionType: ConnectionType;
6
- setConnectionType: Function;
7
- }): JSX.Element | null;
8
- export default ConnectionTypeSelect;
1
+ /// <reference types="react" />
2
+ import ConnectionType from '@jbrowse/core/pluggableElementTypes/ConnectionType';
3
+ declare function ConnectionTypeSelect(props: {
4
+ connectionTypeChoices: ConnectionType[];
5
+ connectionType: ConnectionType;
6
+ setConnectionType: Function;
7
+ }): JSX.Element | null;
8
+ export default ConnectionTypeSelect;
@@ -7,7 +7,7 @@ var _typeof = require("@babel/runtime/helpers/typeof");
7
7
  Object.defineProperty(exports, "__esModule", {
8
8
  value: true
9
9
  });
10
- exports["default"] = void 0;
10
+ exports.default = void 0;
11
11
 
12
12
  var _IconButton = _interopRequireDefault(require("@material-ui/core/IconButton"));
13
13
 
@@ -21,7 +21,7 @@ var _OpenInNew = _interopRequireDefault(require("@material-ui/icons/OpenInNew"))
21
21
 
22
22
  function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
23
23
 
24
- function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
24
+ function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
25
25
 
26
26
  function ConnectionTypeSelect(props) {
27
27
  var connectionTypeChoices = props.connectionTypeChoices,
@@ -43,23 +43,23 @@ function ConnectionTypeSelect(props) {
43
43
  return null;
44
44
  }
45
45
 
46
- return /*#__PURE__*/_react["default"].createElement("form", {
46
+ return /*#__PURE__*/_react.default.createElement("form", {
47
47
  autoComplete: "off"
48
- }, /*#__PURE__*/_react["default"].createElement(_TextField["default"], {
48
+ }, /*#__PURE__*/_react.default.createElement(_TextField.default, {
49
49
  value: connectionType.name,
50
50
  label: "connectionType",
51
- helperText: connectionType.description ? /*#__PURE__*/_react["default"].createElement(_react["default"].Fragment, null, connectionType.description, connectionType.url ? /*#__PURE__*/_react["default"].createElement(_IconButton["default"], {
51
+ helperText: connectionType.description ? /*#__PURE__*/_react.default.createElement(_react.default.Fragment, null, connectionType.description, connectionType.url ? /*#__PURE__*/_react.default.createElement(_IconButton.default, {
52
52
  href: connectionType.url,
53
53
  rel: "noopener noreferrer",
54
54
  target: "_blank",
55
55
  color: "secondary"
56
- }, /*#__PURE__*/_react["default"].createElement(_OpenInNew["default"], null)) : null) : null,
56
+ }, /*#__PURE__*/_react.default.createElement(_OpenInNew.default, null)) : null) : null,
57
57
  select: true,
58
58
  fullWidth: true,
59
59
  onChange: handleChange,
60
60
  variant: "outlined"
61
61
  }, connectionTypeChoices.map(function (connectionTypeChoice) {
62
- return /*#__PURE__*/_react["default"].createElement(_MenuItem["default"], {
62
+ return /*#__PURE__*/_react.default.createElement(_MenuItem.default, {
63
63
  key: connectionTypeChoice.name,
64
64
  value: connectionTypeChoice.name
65
65
  }, connectionTypeChoice.displayName || connectionTypeChoice.name);
@@ -67,4 +67,4 @@ function ConnectionTypeSelect(props) {
67
67
  }
68
68
 
69
69
  var _default = ConnectionTypeSelect;
70
- exports["default"] = _default;
70
+ exports.default = _default;
@@ -1,2 +1,2 @@
1
- export { default as stateModel } from "./model";
2
- export const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
1
+ export { default as stateModel } from "./model";
2
+ export const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
@@ -9,7 +9,7 @@ exports.configSchema = void 0;
9
9
  Object.defineProperty(exports, "stateModel", {
10
10
  enumerable: true,
11
11
  get: function get() {
12
- return _model["default"];
12
+ return _model.default;
13
13
  }
14
14
  });
15
15
 
@@ -1,5 +1,5 @@
1
- declare var _default: import("mobx-state-tree").IModelType<{
2
- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
3
- type: import("mobx-state-tree").ISimpleType<"AddConnectionWidget">;
4
- }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
5
- export default _default;
1
+ declare var _default: import("mobx-state-tree").IModelType<{
2
+ id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
3
+ type: import("mobx-state-tree").ISimpleType<"AddConnectionWidget">;
4
+ }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
5
+ export default _default;
@@ -3,7 +3,7 @@
3
3
  Object.defineProperty(exports, "__esModule", {
4
4
  value: true
5
5
  });
6
- exports["default"] = void 0;
6
+ exports.default = void 0;
7
7
 
8
8
  var _mobxStateTree = require("mobx-state-tree");
9
9
 
@@ -14,4 +14,4 @@ var _default = _mobxStateTree.types.model('AddConnectionModel', {
14
14
  type: _mobxStateTree.types.literal('AddConnectionWidget')
15
15
  });
16
16
 
17
- exports["default"] = _default;
17
+ exports.default = _default;
@@ -1,7 +1,7 @@
1
- /// <reference types="react" />
2
- import { AddTrackModel } from '../model';
3
- declare function AddTrackWidget({ model }: {
4
- model: AddTrackModel;
5
- }): JSX.Element;
6
- declare const _default: typeof AddTrackWidget;
7
- export default _default;
1
+ /// <reference types="react" />
2
+ import { AddTrackModel } from '../model';
3
+ declare function AddTrackWidget({ model }: {
4
+ model: AddTrackModel;
5
+ }): JSX.Element;
6
+ declare const _default: typeof AddTrackWidget;
7
+ export default _default;
@@ -7,7 +7,7 @@ var _typeof = require("@babel/runtime/helpers/typeof");
7
7
  Object.defineProperty(exports, "__esModule", {
8
8
  value: true
9
9
  });
10
- exports["default"] = void 0;
10
+ exports.default = void 0;
11
11
 
12
12
  var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
13
13
 
@@ -35,11 +35,11 @@ var _TrackSourceSelect = _interopRequireDefault(require("./TrackSourceSelect"));
35
35
 
36
36
  function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
37
37
 
38
- function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
38
+ function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
39
39
 
40
40
  function ownKeys(object, enumerableOnly) { var keys = Object.keys(object); if (Object.getOwnPropertySymbols) { var symbols = Object.getOwnPropertySymbols(object); enumerableOnly && (symbols = symbols.filter(function (sym) { return Object.getOwnPropertyDescriptor(object, sym).enumerable; })), keys.push.apply(keys, symbols); } return keys; }
41
41
 
42
- function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2["default"])(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
42
+ function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
43
43
 
44
44
  var useStyles = (0, _core.makeStyles)(function (theme) {
45
45
  return {
@@ -47,7 +47,7 @@ var useStyles = (0, _core.makeStyles)(function (theme) {
47
47
  marginTop: theme.spacing(1)
48
48
  },
49
49
  stepper: {
50
- backgroundColor: theme.palette.background["default"]
50
+ backgroundColor: theme.palette.background.default
51
51
  },
52
52
  button: {
53
53
  marginTop: theme.spacing(1),
@@ -70,7 +70,7 @@ function AddTrackWidget(_ref) {
70
70
  var model = _ref.model;
71
71
 
72
72
  var _useState = (0, _react.useState)(0),
73
- _useState2 = (0, _slicedToArray2["default"])(_useState, 2),
73
+ _useState2 = (0, _slicedToArray2.default)(_useState, 2),
74
74
  activeStep = _useState2[0],
75
75
  setActiveStep = _useState2[1];
76
76
 
@@ -83,24 +83,24 @@ function AddTrackWidget(_ref) {
83
83
  trackType = model.trackType;
84
84
 
85
85
  var _useState3 = (0, _react.useState)(),
86
- _useState4 = (0, _slicedToArray2["default"])(_useState3, 2),
86
+ _useState4 = (0, _slicedToArray2.default)(_useState3, 2),
87
87
  trackErrorMessage = _useState4[0],
88
88
  setTrackErrorMessage = _useState4[1];
89
89
 
90
90
  function getStepContent(step) {
91
91
  switch (step) {
92
92
  case 0:
93
- return /*#__PURE__*/_react["default"].createElement(_TrackSourceSelect["default"], {
93
+ return /*#__PURE__*/_react.default.createElement(_TrackSourceSelect.default, {
94
94
  model: model
95
95
  });
96
96
 
97
97
  case 1:
98
- return /*#__PURE__*/_react["default"].createElement(_ConfirmTrack["default"], {
98
+ return /*#__PURE__*/_react.default.createElement(_ConfirmTrack.default, {
99
99
  model: model
100
100
  });
101
101
 
102
102
  default:
103
- return /*#__PURE__*/_react["default"].createElement(_core.Typography, null, "Unknown step");
103
+ return /*#__PURE__*/_react.default.createElement(_core.Typography, null, "Unknown step");
104
104
  }
105
105
  }
106
106
 
@@ -109,9 +109,9 @@ function AddTrackWidget(_ref) {
109
109
  }
110
110
 
111
111
  function _handleNext() {
112
- _handleNext = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
112
+ _handleNext = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
113
113
  var trackId, assemblyInstance;
114
- return _regenerator["default"].wrap(function _callee$(_context) {
114
+ return _regenerator.default.wrap(function _callee$(_context) {
115
115
  while (1) {
116
116
  switch (_context.prev = _context.next) {
117
117
  case 0:
@@ -180,31 +180,31 @@ function AddTrackWidget(_ref) {
180
180
  }
181
181
  }
182
182
 
183
- return /*#__PURE__*/_react["default"].createElement("div", {
183
+ return /*#__PURE__*/_react.default.createElement("div", {
184
184
  className: classes.root
185
- }, /*#__PURE__*/_react["default"].createElement(_core.Stepper, {
185
+ }, /*#__PURE__*/_react.default.createElement(_core.Stepper, {
186
186
  className: classes.stepper,
187
187
  activeStep: activeStep,
188
188
  orientation: "vertical"
189
189
  }, steps.map(function (label, idx) {
190
- return /*#__PURE__*/_react["default"].createElement(_core.Step, {
190
+ return /*#__PURE__*/_react.default.createElement(_core.Step, {
191
191
  key: label
192
- }, /*#__PURE__*/_react["default"].createElement(_core.StepLabel, null, label), /*#__PURE__*/_react["default"].createElement(_core.StepContent, null, getStepContent(idx), /*#__PURE__*/_react["default"].createElement("div", {
192
+ }, /*#__PURE__*/_react.default.createElement(_core.StepLabel, null, label), /*#__PURE__*/_react.default.createElement(_core.StepContent, null, getStepContent(idx), /*#__PURE__*/_react.default.createElement("div", {
193
193
  className: classes.actionsContainer
194
- }, /*#__PURE__*/_react["default"].createElement(_core.Button, {
194
+ }, /*#__PURE__*/_react.default.createElement(_core.Button, {
195
195
  disabled: activeStep === 0,
196
196
  onClick: handleBack,
197
197
  className: classes.button
198
- }, "Back"), /*#__PURE__*/_react["default"].createElement(_core.Button, {
198
+ }, "Back"), /*#__PURE__*/_react.default.createElement(_core.Button, {
199
199
  disabled: isNextDisabled(),
200
200
  variant: "contained",
201
201
  color: "primary",
202
202
  onClick: handleNext,
203
203
  className: classes.button,
204
204
  "data-testid": "addTrackNextButton"
205
- }, activeStep === steps.length - 1 ? 'Add' : 'Next')), trackErrorMessage ? /*#__PURE__*/_react["default"].createElement("div", {
205
+ }, activeStep === steps.length - 1 ? 'Add' : 'Next')), trackErrorMessage ? /*#__PURE__*/_react.default.createElement("div", {
206
206
  className: classes.alertContainer
207
- }, /*#__PURE__*/_react["default"].createElement(_lab.Alert, {
207
+ }, /*#__PURE__*/_react.default.createElement(_lab.Alert, {
208
208
  severity: "error"
209
209
  }, trackErrorMessage)) : null));
210
210
  })));
@@ -212,4 +212,4 @@ function AddTrackWidget(_ref) {
212
212
 
213
213
  var _default = (0, _mobxReact.observer)(AddTrackWidget);
214
214
 
215
- exports["default"] = _default;
215
+ exports.default = _default;
@@ -96,21 +96,21 @@ describe('<AddTrackWidget />', function () {
96
96
  });
97
97
  afterEach(_react2.cleanup);
98
98
  it('renders', function () {
99
- var _render = (0, _react2.render)( /*#__PURE__*/_react["default"].createElement(_AddTrackWidget["default"], {
99
+ var _render = (0, _react2.render)( /*#__PURE__*/_react.default.createElement(_AddTrackWidget.default, {
100
100
  model: model
101
101
  })),
102
102
  container = _render.container;
103
103
 
104
104
  expect(container.firstChild).toMatchSnapshot();
105
105
  });
106
- it('adds a track', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
106
+ it('adds a track', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
107
107
  var _render2, getByTestId, getAllByTestId, findByText, findAllByText, bamAdapter, trackTypeSelect, featureTrack, assemblyNameSelect, volMyt1;
108
108
 
109
- return _regenerator["default"].wrap(function _callee$(_context) {
109
+ return _regenerator.default.wrap(function _callee$(_context) {
110
110
  while (1) {
111
111
  switch (_context.prev = _context.next) {
112
112
  case 0:
113
- _render2 = (0, _react2.render)( /*#__PURE__*/_react["default"].createElement(_AddTrackWidget["default"], {
113
+ _render2 = (0, _react2.render)( /*#__PURE__*/_react.default.createElement(_AddTrackWidget.default, {
114
114
  model: model
115
115
  })), getByTestId = _render2.getByTestId, getAllByTestId = _render2.getAllByTestId, findByText = _render2.findByText, findAllByText = _render2.findAllByText;
116
116
  expect(session.sessionTracks.length).toBe(1);
@@ -174,14 +174,14 @@ describe('<AddTrackWidget />', function () {
174
174
  }
175
175
  }, _callee);
176
176
  })));
177
- xit('fails to add a track', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2() {
177
+ xit('fails to add a track', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
178
178
  var _render3, getByTestId, getAllByTestId, findByText, chrom;
179
179
 
180
- return _regenerator["default"].wrap(function _callee2$(_context2) {
180
+ return _regenerator.default.wrap(function _callee2$(_context2) {
181
181
  while (1) {
182
182
  switch (_context2.prev = _context2.next) {
183
183
  case 0:
184
- _render3 = (0, _react2.render)( /*#__PURE__*/_react["default"].createElement(_AddTrackWidget["default"], {
184
+ _render3 = (0, _react2.render)( /*#__PURE__*/_react.default.createElement(_AddTrackWidget.default, {
185
185
  model: model
186
186
  })), getByTestId = _render3.getByTestId, getAllByTestId = _render3.getAllByTestId, findByText = _render3.findByText;
187
187
  expect(session.sessionTracks.length).toBe(2);
@@ -1,7 +1,7 @@
1
- /// <reference types="react" />
2
- import { AddTrackModel } from '../model';
3
- declare function ConfirmTrack({ model }: {
4
- model: AddTrackModel;
5
- }): JSX.Element;
6
- declare const _default: typeof ConfirmTrack;
7
- export default _default;
1
+ /// <reference types="react" />
2
+ import { AddTrackModel } from '../model';
3
+ declare function ConfirmTrack({ model }: {
4
+ model: AddTrackModel;
5
+ }): JSX.Element;
6
+ declare const _default: typeof ConfirmTrack;
7
+ export default _default;