@jbrowse/plugin-alignments 2.1.7 → 2.2.1

package/esm/LinearSNPCoverageDisplay/models/model.js

@@ -8,173 +8,254 @@ import Tooltip from '../components/Tooltip';
 import { getUniqueModificationValues } from '../../shared';
 // using a map because it preserves order
 const rendererTypes = new Map([['snpcoverage', 'SNPCoverageRenderer']]);
-const stateModelFactory = (pluginManager, configSchema) => types
-    .compose('LinearSNPCoverageDisplay', linearWiggleDisplayModelFactory(pluginManager, configSchema), types.model({
-    type: types.literal('LinearSNPCoverageDisplay'),
-    drawInterbaseCounts: types.maybe(types.boolean),
-    drawIndicators: types.maybe(types.boolean),
-    drawArcs: types.maybe(types.boolean),
-    filterBy: types.optional(types.model({
-        flagInclude: types.optional(types.number, 0),
-        flagExclude: types.optional(types.number, 1540),
-        readName: types.maybe(types.string),
-        tagFilter: types.maybe(types.model({ tag: types.string, value: types.string })),
-    }), {}),
-    colorBy: types.maybe(types.model({
-        type: types.string,
-        tag: types.maybe(types.string),
-    })),
-}))
-    .volatile(() => ({
-    modificationTagMap: observable.map({}),
-}))
-    .actions(self => ({
-    setConfig(configuration) {
-        self.configuration = configuration;
-    },
-    setFilterBy(filter) {
-        self.filterBy = cast(filter);
-    },
-    setColorBy(colorBy) {
-        self.colorBy = cast(colorBy);
-    },
-    updateModificationColorMap(uniqueModifications) {
-        const colorPalette = ['red', 'blue', 'green', 'orange', 'purple'];
-        let i = 0;
-        uniqueModifications.forEach(value => {
-            if (!self.modificationTagMap.has(value)) {
-                const newColor = colorPalette[i++];
-                self.modificationTagMap.set(value, newColor);
-            }
-        });
-    },
-}))
-    .views(self => {
-    const { renderProps: superRenderProps } = self;
-    return {
-        get rendererConfig() {
-            var _a, _b, _c;
-            const configBlob = getConf(self, ['renderers', self.rendererTypeName]) || {};
-            return self.rendererType.configSchema.create({
-                ...configBlob,
-                drawInterbaseCounts: (_a = self.drawInterbaseCounts) !== null && _a !== void 0 ? _a : configBlob.drawInterbaseCounts,
-                drawIndicators: (_b = self.drawIndicators) !== null && _b !== void 0 ? _b : configBlob.drawIndicators,
-                drawArcs: (_c = self.drawArcs) !== null && _c !== void 0 ? _c : configBlob.drawArcs,
-            }, getEnv(self));
+/**
+ * #stateModel LinearSNPCoverageDisplay
+ * extends `LinearWiggleDisplay`
+ */
+function stateModelFactory(pluginManager, configSchema) {
+    return types
+        .compose('LinearSNPCoverageDisplay', linearWiggleDisplayModelFactory(pluginManager, configSchema), types.model({
+        /**
+         * #property
+         */
+        type: types.literal('LinearSNPCoverageDisplay'),
+        /**
+         * #property
+         */
+        drawInterbaseCounts: types.maybe(types.boolean),
+        /**
+         * #property
+         */
+        drawIndicators: types.maybe(types.boolean),
+        /**
+         * #property
+         */
+        drawArcs: types.maybe(types.boolean),
+        /**
+         * #property
+         */
+        filterBy: types.optional(types.model({
+            flagInclude: types.optional(types.number, 0),
+            flagExclude: types.optional(types.number, 1540),
+            readName: types.maybe(types.string),
+            tagFilter: types.maybe(types.model({ tag: types.string, value: types.string })),
+        }), {}),
+        /**
+         * #property
+         */
+        colorBy: types.maybe(types.model({
+            type: types.string,
+            tag: types.maybe(types.string),
+        })),
+    }))
+        .volatile(() => ({
+        modificationTagMap: observable.map({}),
+    }))
+        .actions(self => ({
+        /**
+         * #action
+         */
+        setConfig(configuration) {
+            self.configuration = configuration;
         },
-        get drawArcsSetting() {
-            var _a;
-            return ((_a = self.drawArcs) !== null && _a !== void 0 ? _a : readConfObject(this.rendererConfig, 'drawArcs'));
+        /**
+         * #action
+         */
+        setFilterBy(filter) {
+            self.filterBy = cast(filter);
         },
-        get drawInterbaseCountsSetting() {
-            var _a;
-            return ((_a = self.drawInterbaseCounts) !== null && _a !== void 0 ? _a : readConfObject(this.rendererConfig, 'drawInterbaseCounts'));
+        /**
+         * #action
+         */
+        setColorBy(colorBy) {
+            self.colorBy = cast(colorBy);
         },
-        get drawIndicatorsSetting() {
-            var _a;
-            return ((_a = self.drawIndicators) !== null && _a !== void 0 ? _a : readConfObject(this.rendererConfig, 'drawIndicators'));
-        },
-        get modificationsReady() {
-            var _a;
-            return ((_a = self.colorBy) === null || _a === void 0 ? void 0 : _a.type) === 'modifications'
-                ? Object.keys(JSON.parse(JSON.stringify(self.modificationTagMap)))
-                    .length > 0
-                : true;
-        },
-        renderProps() {
-            const superProps = superRenderProps();
-            const { colorBy, filterBy, modificationTagMap } = self;
-            return {
-                ...superProps,
-                notReady: superProps.notReady || !this.modificationsReady,
-                modificationTagMap: Object.fromEntries(modificationTagMap.toJSON()),
-                // must use getSnapshot because otherwise changes to e.g. just the
-                // colorBy.type are not read
-                colorBy: colorBy ? getSnapshot(colorBy) : undefined,
-                filterBy: filterBy ? getSnapshot(filterBy) : undefined,
-            };
-        },
-    };
-})
-    .actions(self => ({
-    toggleDrawIndicators() {
-        self.drawIndicators = !self.drawIndicatorsSetting;
-    },
-    toggleDrawInterbaseCounts() {
-        self.drawInterbaseCounts = !self.drawInterbaseCountsSetting;
-    },
-    toggleDrawArcs() {
-        self.drawArcs = !self.drawArcsSetting;
-    },
-    afterAttach() {
-        addDisposer(self, autorun(async () => {
-            try {
-                const { colorBy } = self;
-                const view = getContainingView(self);
-                if (!view.initialized ||
-                    !self.estimatedStatsReady ||
-                    self.regionTooLarge) {
-                    return;
-                }
-                const { staticBlocks } = view;
-                if ((colorBy === null || colorBy === void 0 ? void 0 : colorBy.type) === 'modifications') {
-                    const adapter = getConf(self.parentTrack, 'adapter');
-                    self.updateModificationColorMap(await getUniqueModificationValues(self, adapter, colorBy, staticBlocks));
+        /**
+         * #action
+         */
+        updateModificationColorMap(uniqueModifications) {
+            const colorPalette = ['red', 'blue', 'green', 'orange', 'purple'];
+            let i = 0;
+            uniqueModifications.forEach(value => {
+                if (!self.modificationTagMap.has(value)) {
+                    const newColor = colorPalette[i++];
+                    self.modificationTagMap.set(value, newColor);
                 }
-            }
-            catch (error) {
-                console.error(error);
-                self.setError(error);
-            }
-        }, { delay: 1000 }));
-    },
-}))
-    .views(self => {
-    const { trackMenuItems: superTrackMenuItems } = self;
-    return {
-        get TooltipComponent() {
-            return Tooltip;
+            });
         },
-        get adapterConfig() {
-            const subadapter = getConf(self.parentTrack, 'adapter');
-            return {
-                type: 'SNPCoverageAdapter',
-                subadapter,
-            };
+    }))
+        .views(self => {
+        const { renderProps: superRenderProps } = self;
+        return {
+            /**
+             * #getter
+             */
+            get rendererConfig() {
+                var _a, _b, _c;
+                const configBlob = getConf(self, ['renderers', self.rendererTypeName]) || {};
+                return self.rendererType.configSchema.create({
+                    ...configBlob,
+                    drawInterbaseCounts: (_a = self.drawInterbaseCounts) !== null && _a !== void 0 ? _a : configBlob.drawInterbaseCounts,
+                    drawIndicators: (_b = self.drawIndicators) !== null && _b !== void 0 ? _b : configBlob.drawIndicators,
+                    drawArcs: (_c = self.drawArcs) !== null && _c !== void 0 ? _c : configBlob.drawArcs,
+                }, getEnv(self));
+            },
+            /**
+             * #getter
+             */
+            get drawArcsSetting() {
+                var _a;
+                return ((_a = self.drawArcs) !== null && _a !== void 0 ? _a : readConfObject(this.rendererConfig, 'drawArcs'));
+            },
+            /**
+             * #getter
+             */
+            get drawInterbaseCountsSetting() {
+                var _a;
+                return ((_a = self.drawInterbaseCounts) !== null && _a !== void 0 ? _a : readConfObject(this.rendererConfig, 'drawInterbaseCounts'));
+            },
+            /**
+             * #getter
+             */
+            get drawIndicatorsSetting() {
+                var _a;
+                return ((_a = self.drawIndicators) !== null && _a !== void 0 ? _a : readConfObject(this.rendererConfig, 'drawIndicators'));
+            },
+            /**
+             * #getter
+             */
+            get modificationsReady() {
+                var _a;
+                return ((_a = self.colorBy) === null || _a === void 0 ? void 0 : _a.type) === 'modifications'
+                    ? Object.keys(JSON.parse(JSON.stringify(self.modificationTagMap)))
+                        .length > 0
+                    : true;
+            },
+            /**
+             * #method
+             */
+            renderProps() {
+                const superProps = superRenderProps();
+                const { colorBy, filterBy, modificationTagMap } = self;
+                return {
+                    ...superProps,
+                    notReady: superProps.notReady || !this.modificationsReady,
+                    modificationTagMap: Object.fromEntries(modificationTagMap.toJSON()),
+                    // must use getSnapshot because otherwise changes to e.g. just the
+                    // colorBy.type are not read
+                    colorBy: colorBy ? getSnapshot(colorBy) : undefined,
+                    filterBy: filterBy ? getSnapshot(filterBy) : undefined,
+                };
+            },
+        };
+    })
+        .actions(self => ({
+        /**
+         * #action
+         */
+        toggleDrawIndicators() {
+            self.drawIndicators = !self.drawIndicatorsSetting;
         },
-        get rendererTypeName() {
-            return rendererTypes.get('snpcoverage');
+        /**
+         * #action
+         */
+        toggleDrawInterbaseCounts() {
+            self.drawInterbaseCounts = !self.drawInterbaseCountsSetting;
         },
-        get needsScalebar() {
-            return true;
+        /**
+         * #action
+         */
+        toggleDrawArcs() {
+            self.drawArcs = !self.drawArcsSetting;
         },
-        contextMenuItems() {
-            return [];
-        },
-        trackMenuItems() {
-            return [
-                ...superTrackMenuItems(),
-                {
-                    label: 'Draw insertion/clipping indicators',
-                    type: 'checkbox',
-                    checked: self.drawIndicatorsSetting,
-                    onClick: () => self.toggleDrawIndicators(),
-                },
-                {
-                    label: 'Draw insertion/clipping counts',
-                    type: 'checkbox',
-                    checked: self.drawInterbaseCountsSetting,
-                    onClick: () => self.toggleDrawInterbaseCounts(),
-                },
-                {
-                    label: 'Draw arcs',
-                    type: 'checkbox',
-                    checked: self.drawArcsSetting,
-                    onClick: () => self.toggleDrawArcs(),
-                },
-            ];
+        afterAttach() {
+            addDisposer(self, autorun(async () => {
+                try {
+                    const { colorBy } = self;
+                    const view = getContainingView(self);
+                    if (!view.initialized ||
+                        !self.estimatedStatsReady ||
+                        self.regionTooLarge) {
+                        return;
+                    }
+                    const { staticBlocks } = view;
+                    if ((colorBy === null || colorBy === void 0 ? void 0 : colorBy.type) === 'modifications') {
+                        const adapter = getConf(self.parentTrack, 'adapter');
+                        self.updateModificationColorMap(await getUniqueModificationValues(self, adapter, colorBy, staticBlocks));
+                    }
+                }
+                catch (error) {
+                    console.error(error);
+                    self.setError(error);
+                }
+            }, { delay: 1000 }));
         },
-    };
-});
+    }))
+        .views(self => {
+        const { trackMenuItems: superTrackMenuItems } = self;
+        return {
+            /**
+             * #getter
+             */
+            get TooltipComponent() {
+                return Tooltip;
+            },
+            /**
+             * #getter
+             */
+            get adapterConfig() {
+                const subadapter = getConf(self.parentTrack, 'adapter');
+                return {
+                    type: 'SNPCoverageAdapter',
+                    subadapter,
+                };
+            },
+            /**
+             * #getter
+             */
+            get rendererTypeName() {
+                return rendererTypes.get('snpcoverage');
+            },
+            /**
+             * #getter
+             */
+            get needsScalebar() {
+                return true;
+            },
+            /**
+             * #method
+             */
+            contextMenuItems() {
+                return [];
+            },
+            /**
+             * #method
+             */
+            trackMenuItems() {
+                return [
+                    ...superTrackMenuItems(),
+                    {
+                        label: 'Draw insertion/clipping indicators',
+                        type: 'checkbox',
+                        checked: self.drawIndicatorsSetting,
+                        onClick: () => self.toggleDrawIndicators(),
+                    },
+                    {
+                        label: 'Draw insertion/clipping counts',
+                        type: 'checkbox',
+                        checked: self.drawInterbaseCountsSetting,
+                        onClick: () => self.toggleDrawInterbaseCounts(),
+                    },
+                    {
+                        label: 'Draw arcs',
+                        type: 'checkbox',
+                        checked: self.drawArcsSetting,
+                        onClick: () => self.toggleDrawArcs(),
+                    },
+                ];
+            },
+        };
+    });
+}
 export default stateModelFactory;
 //# sourceMappingURL=model.js.map

package/esm/LinearSNPCoverageDisplay/models/model.js.map

@@ -1 +1 @@
-{"version":3,"file":"model.js","sourceRoot":"","sources":["../../../src/LinearSNPCoverageDisplay/models/model.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,WAAW,EAAE,KAAK,EAAE,IAAI,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,iBAAiB,CAAA;AAC/E,OAAO,EAAE,UAAU,EAAE,OAAO,EAAE,MAAM,MAAM,CAAA;AAC1C,OAAO,EACL,OAAO,EACP,cAAc,GAGf,MAAM,6BAA6B,CAAA;AACpC,OAAO,EAAE,+BAA+B,EAAE,MAAM,wBAAwB,CAAA;AAIxE,OAAO,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAA;AAEtD,SAAS;AACT,OAAO,OAAO,MAAM,uBAAuB,CAAA;AAC3C,OAAO,EAAE,2BAA2B,EAAE,MAAM,cAAc,CAAA;AAE1D,yCAAyC;AACzC,MAAM,aAAa,GAAG,IAAI,GAAG,CAAC,CAAC,CAAC,aAAa,EAAE,qBAAqB,CAAC,CAAC,CAAC,CAAA;AAIvE,MAAM,iBAAiB,GAAG,CACxB,aAA4B,EAC5B,YAAwC,EACxC,EAAE,CACF,KAAK;KACF,OAAO,CACN,0BAA0B,EAC1B,+BAA+B,CAAC,aAAa,EAAE,YAAY,CAAC,EAC5D,KAAK,CAAC,KAAK,CAAC;IACV,IAAI,EAAE,KAAK,CAAC,OAAO,CAAC,0BAA0B,CAAC;IAC/C,mBAAmB,EAAE,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,OAAO,CAAC;IAC/C,cAAc,EAAE,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,OAAO,CAAC;IAC1C,QAAQ,EAAE,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,OAAO,CAAC;IACpC,QAAQ,EAAE,KAAK,CAAC,QAAQ,CACtB,KAAK,CAAC,KAAK,CAAC;QACV,WAAW,EAAE,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,MAAM,EAAE,CAAC,CAAC;QAC5C,WAAW,EAAE,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,MAAM,EAAE,IAAI,CAAC;QAC/C,QAAQ,EAAE,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,MAAM,CAAC;QACnC,SAAS,EAAE,KAAK,CAAC,KAAK,CACpB,KAAK,CAAC,KAAK,CAAC,EAAE,GAAG,EAAE,KAAK,CAAC,MAAM,EAAE,KAAK,EAAE,KAAK,CAAC,MAAM,EAAE,CAAC,CACxD;KACF,CAAC,EACF,EAAE,CACH;IACD,OAAO,EAAE,KAAK,CAAC,KAAK,CAClB,KAAK,CAAC,KAAK,CAAC;QACV,IAAI,EAAE,KAAK,CAAC,MAAM;QAClB,GAAG,EAAE,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,MAAM,CAAC;KAC/B,CAAC,CACH;CACF,CAAC,CACH;KACA,QAAQ,CAAC,GAAG,EAAE,CAAC,CAAC;IACf,kBAAkB,EAAE,UAAU,CAAC,GAAG,CAAC,EAAE,CAAC;CACvC,CAAC,CAAC;KACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,SAAS,CAAC,aAAoC;QAC5C,IAAI,CAAC,aAAa,GAAG,aAAa,CAAA;IACpC,CAAC;IACD,WAAW,CAAC,MAKX;QACC,IAAI,CAAC,QAAQ,GAAG,IAAI,CAAC,MAAM,CAAC,CAAA;IAC9B,CAAC;IACD,UAAU,CAAC,OAAwC;QACjD,IAAI,CAAC,OAAO,GAAG,IAAI,CAAC,OAAO,CAAC,CAAA;IAC9B,CAAC;IAED,0BAA0B,CAAC,mBAA6B;QACtD,MAAM,YAAY,GAAG,CAAC,KAAK,EAAE,MAAM,EAAE,OAAO,EAAE,QAAQ,EAAE,QAAQ,CAAC,CAAA;QACjE,IAAI,CAAC,GAAG,CAAC,CAAA;QAET,mBAAmB,CAAC,OAAO,CAAC,KAAK,CAAC,EAAE;YAClC,IAAI,CAAC,IAAI,CAAC,kBAAkB,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE;gBACvC,MAAM,QAAQ,GAAG,YAAY,CAAC,CAAC,EAAE,CAAC,CAAA;gBAClC,IAAI,CAAC,kBAAkB,CAAC,GAAG,CAAC,KAAK,EAAE,QAAQ,CAAC,CAAA;aAC7C;QACH,CAAC,CAAC,CAAA;IACJ,CAAC;CACF,CAAC,CAAC;KACF,KAAK,CAAC,IAAI,CAAC,EAAE;IACZ,MAAM,EAAE,WAAW,EAAE,gBAAgB,EAAE,GAAG,IAAI,CAAA;IAC9C,OAAO;QACL,IAAI,cAAc;;YAChB,MAAM,UAAU,GACd,OAAO,CAAC,IAAI,EAAE,CAAC,WAAW,EAAE,IAAI,CAAC,gBAAgB,CAAC,CAAC,IAAI,EAAE,CAAA;YAE3D,OAAO,IAAI,CAAC,YAAY,CAAC,YAAY,CAAC,MAAM,CAC1C;gBACE,GAAG,UAAU;gBACb,mBAAmB,EACjB,MAAA,IAAI,CAAC,mBAAmB,mCAAI,UAAU,CAAC,mBAAmB;gBAC5D,cAAc,EAAE,MAAA,IAAI,CAAC,cAAc,mCAAI,UAAU,CAAC,cAAc;gBAChE,QAAQ,EAAE,MAAA,IAAI,CAAC,QAAQ,mCAAI,UAAU,CAAC,QAAQ;aAC/C,EACD,MAAM,CAAC,IAAI,CAAC,CACb,CAAA;QACH,CAAC;QACD,IAAI,eAAe;;YACjB,OAAO,CACL,MAAA,IAAI,CAAC,QAAQ,mCAAI,cAAc,CAAC,IAAI,CAAC,cAAc,EAAE,UAAU,CAAC,CACjE,CAAA;QACH,CAAC;QACD,IAAI,0BAA0B;;YAC5B,OAAO,CACL,MAAA,IAAI,CAAC,mBAAmB,mCACxB,cAAc,CAAC,IAAI,CAAC,cAAc,EAAE,qBAAqB,CAAC,CAC3D,CAAA;QACH,CAAC;QACD,IAAI,qBAAqB;;YACvB,OAAO,CACL,MAAA,IAAI,CAAC,cAAc,mCACnB,cAAc,CAAC,IAAI,CAAC,cAAc,EAAE,gBAAgB,CAAC,CACtD,CAAA;QACH,CAAC;QAED,IAAI,kBAAkB;;YACpB,OAAO,CAAA,MAAA,IAAI,CAAC,OAAO,0CAAE,IAAI,MAAK,eAAe;gBAC3C,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,kBAAkB,CAAC,CAAC,CAAC;qBAC7D,MAAM,GAAG,CAAC;gBACf,CAAC,CAAC,IAAI,CAAA;QACV,CAAC;QAED,WAAW;YACT,MAAM,UAAU,GAAG,gBAAgB,EAAE,CAAA;YACrC,MAAM,EAAE,OAAO,EAAE,QAAQ,EAAE,kBAAkB,EAAE,GAAG,IAAI,CAAA;YACtD,OAAO;gBACL,GAAG,UAAU;gBACb,QAAQ,EAAE,UAAU,CAAC,QAAQ,IAAI,CAAC,IAAI,CAAC,kBAAkB;gBACzD,kBAAkB,EAAE,MAAM,CAAC,WAAW,CAAC,kBAAkB,CAAC,MAAM,EAAE,CAAC;gBAEnE,kEAAkE;gBAClE,4BAA4B;gBAC5B,OAAO,EAAE,OAAO,CAAC,CAAC,CAAC,WAAW,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,SAAS;gBACnD,QAAQ,EAAE,QAAQ,CAAC,CAAC,CAAC,WAAW,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,SAAS;aACvD,CAAA;QACH,CAAC;KACF,CAAA;AACH,CAAC,CAAC;KACD,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,oBAAoB;QAClB,IAAI,CAAC,cAAc,GAAG,CAAC,IAAI,CAAC,qBAAqB,CAAA;IACnD,CAAC;IACD,yBAAyB;QACvB,IAAI,CAAC,mBAAmB,GAAG,CAAC,IAAI,CAAC,0BAA0B,CAAA;IAC7D,CAAC;IACD,cAAc;QACZ,IAAI,CAAC,QAAQ,GAAG,CAAC,IAAI,CAAC,eAAe,CAAA;IACvC,CAAC;IACD,WAAW;QACT,WAAW,CACT,IAAI,EACJ,OAAO,CACL,KAAK,IAAI,EAAE;YACT,IAAI;gBACF,MAAM,EAAE,OAAO,EAAE,GAAG,IAAI,CAAA;gBACxB,MAAM,IAAI,GAAG,iBAAiB,CAAC,IAAI,CAAQ,CAAA;gBAE3C,IACE,CAAC,IAAI,CAAC,WAAW;oBACjB,CAAC,IAAI,CAAC,mBAAmB;oBACzB,IAAI,CAAC,cAAc,EACnB;oBACA,OAAM;iBACP;gBACD,MAAM,EAAE,YAAY,EAAE,GAAG,IAAI,CAAA;gBAC7B,IAAI,CAAA,OAAO,aAAP,OAAO,uBAAP,OAAO,CAAE,IAAI,MAAK,eAAe,EAAE;oBACrC,MAAM,OAAO,GAAG,OAAO,CAAC,IAAI,CAAC,WAAW,EAAE,SAAS,CAAC,CAAA;oBACpD,IAAI,CAAC,0BAA0B,CAC7B,MAAM,2BAA2B,CAC/B,IAAI,EACJ,OAAO,EACP,OAAO,EACP,YAAY,CACb,CACF,CAAA;iBACF;aACF;YAAC,OAAO,KAAK,EAAE;gBACd,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAA;gBACpB,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAA;aACrB;QACH,CAAC,EACD,EAAE,KAAK,EAAE,IAAI,EAAE,CAChB,CACF,CAAA;IACH,CAAC;CACF,CAAC,CAAC;KAEF,KAAK,CAAC,IAAI,CAAC,EAAE;IACZ,MAAM,EAAE,cAAc,EAAE,mBAAmB,EAAE,GAAG,IAAI,CAAA;IACpD,OAAO;QACL,IAAI,gBAAgB;YAClB,OAAO,OAAO,CAAA;QAChB,CAAC;QAED,IAAI,aAAa;YACf,MAAM,UAAU,GAAG,OAAO,CAAC,IAAI,CAAC,WAAW,EAAE,SAAS,CAAC,CAAA;YACvD,OAAO;gBACL,IAAI,EAAE,oBAAoB;gBAC1B,UAAU;aACX,CAAA;QACH,CAAC;QAED,IAAI,gBAAgB;YAClB,OAAO,aAAa,CAAC,GAAG,CAAC,aAAa,CAAC,CAAA;QACzC,CAAC;QAED,IAAI,aAAa;YACf,OAAO,IAAI,CAAA;QACb,CAAC;QAED,gBAAgB;YACd,OAAO,EAAE,CAAA;QACX,CAAC;QAED,cAAc;YACZ,OAAO;gBACL,GAAG,mBAAmB,EAAE;gBACxB;oBACE,KAAK,EAAE,oCAAoC;oBAC3C,IAAI,EAAE,UAAU;oBAChB,OAAO,EAAE,IAAI,CAAC,qBAAqB;oBACnC,OAAO,EAAE,GAAG,EAAE,CAAC,IAAI,CAAC,oBAAoB,EAAE;iBAC3C;gBACD;oBACE,KAAK,EAAE,gCAAgC;oBACvC,IAAI,EAAE,UAAU;oBAChB,OAAO,EAAE,IAAI,CAAC,0BAA0B;oBACxC,OAAO,EAAE,GAAG,EAAE,CAAC,IAAI,CAAC,yBAAyB,EAAE;iBAChD;gBACD;oBACE,KAAK,EAAE,WAAW;oBAClB,IAAI,EAAE,UAAU;oBAChB,OAAO,EAAE,IAAI,CAAC,eAAe;oBAC7B,OAAO,EAAE,GAAG,EAAE,CAAC,IAAI,CAAC,cAAc,EAAE;iBACrC;aACF,CAAA;QACH,CAAC;KACF,CAAA;AACH,CAAC,CAAC,CAAA;AAIN,eAAe,iBAAiB,CAAA"}
+{"version":3,"file":"model.js","sourceRoot":"","sources":["../../../src/LinearSNPCoverageDisplay/models/model.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,WAAW,EAAE,KAAK,EAAE,IAAI,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,iBAAiB,CAAA;AAC/E,OAAO,EAAE,UAAU,EAAE,OAAO,EAAE,MAAM,MAAM,CAAA;AAC1C,OAAO,EACL,OAAO,EACP,cAAc,GAGf,MAAM,6BAA6B,CAAA;AACpC,OAAO,EAAE,+BAA+B,EAAE,MAAM,wBAAwB,CAAA;AAGxE,OAAO,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAA;AAEtD,SAAS;AACT,OAAO,OAAO,MAAM,uBAAuB,CAAA;AAC3C,OAAO,EAAE,2BAA2B,EAAE,MAAM,cAAc,CAAA;AAE1D,yCAAyC;AACzC,MAAM,aAAa,GAAG,IAAI,GAAG,CAAC,CAAC,CAAC,aAAa,EAAE,qBAAqB,CAAC,CAAC,CAAC,CAAA;AAIvE;;;GAGG;AACH,SAAS,iBAAiB,CACxB,aAA4B,EAC5B,YAAwC;IAExC,OAAO,KAAK;SACT,OAAO,CACN,0BAA0B,EAC1B,+BAA+B,CAAC,aAAa,EAAE,YAAY,CAAC,EAC5D,KAAK,CAAC,KAAK,CAAC;QACV;;WAEG;QACH,IAAI,EAAE,KAAK,CAAC,OAAO,CAAC,0BAA0B,CAAC;QAC/C;;WAEG;QACH,mBAAmB,EAAE,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,OAAO,CAAC;QAC/C;;WAEG;QACH,cAAc,EAAE,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,OAAO,CAAC;QAC1C;;WAEG;QACH,QAAQ,EAAE,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,OAAO,CAAC;QACpC;;WAEG;QACH,QAAQ,EAAE,KAAK,CAAC,QAAQ,CACtB,KAAK,CAAC,KAAK,CAAC;YACV,WAAW,EAAE,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,MAAM,EAAE,CAAC,CAAC;YAC5C,WAAW,EAAE,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,MAAM,EAAE,IAAI,CAAC;YAC/C,QAAQ,EAAE,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,MAAM,CAAC;YACnC,SAAS,EAAE,KAAK,CAAC,KAAK,CACpB,KAAK,CAAC,KAAK,CAAC,EAAE,GAAG,EAAE,KAAK,CAAC,MAAM,EAAE,KAAK,EAAE,KAAK,CAAC,MAAM,EAAE,CAAC,CACxD;SACF,CAAC,EACF,EAAE,CACH;QACD;;WAEG;QACH,OAAO,EAAE,KAAK,CAAC,KAAK,CAClB,KAAK,CAAC,KAAK,CAAC;YACV,IAAI,EAAE,KAAK,CAAC,MAAM;YAClB,GAAG,EAAE,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,MAAM,CAAC;SAC/B,CAAC,CACH;KACF,CAAC,CACH;SACA,QAAQ,CAAC,GAAG,EAAE,CAAC,CAAC;QACf,kBAAkB,EAAE,UAAU,CAAC,GAAG,CAAC,EAAE,CAAC;KACvC,CAAC,CAAC;SACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB;;WAEG;QACH,SAAS,CAAC,aAAoC;YAC5C,IAAI,CAAC,aAAa,GAAG,aAAa,CAAA;QACpC,CAAC;QACD;;WAEG;QACH,WAAW,CAAC,MAKX;YACC,IAAI,CAAC,QAAQ,GAAG,IAAI,CAAC,MAAM,CAAC,CAAA;QAC9B,CAAC;QACD;;WAEG;QACH,UAAU,CAAC,OAAwC;YACjD,IAAI,CAAC,OAAO,GAAG,IAAI,CAAC,OAAO,CAAC,CAAA;QAC9B,CAAC;QAED;;WAEG;QACH,0BAA0B,CAAC,mBAA6B;YACtD,MAAM,YAAY,GAAG,CAAC,KAAK,EAAE,MAAM,EAAE,OAAO,EAAE,QAAQ,EAAE,QAAQ,CAAC,CAAA;YACjE,IAAI,CAAC,GAAG,CAAC,CAAA;YAET,mBAAmB,CAAC,OAAO,CAAC,KAAK,CAAC,EAAE;gBAClC,IAAI,CAAC,IAAI,CAAC,kBAAkB,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE;oBACvC,MAAM,QAAQ,GAAG,YAAY,CAAC,CAAC,EAAE,CAAC,CAAA;oBAClC,IAAI,CAAC,kBAAkB,CAAC,GAAG,CAAC,KAAK,EAAE,QAAQ,CAAC,CAAA;iBAC7C;YACH,CAAC,CAAC,CAAA;QACJ,CAAC;KACF,CAAC,CAAC;SACF,KAAK,CAAC,IAAI,CAAC,EAAE;QACZ,MAAM,EAAE,WAAW,EAAE,gBAAgB,EAAE,GAAG,IAAI,CAAA;QAC9C,OAAO;YACL;;eAEG;YACH,IAAI,cAAc;;gBAChB,MAAM,UAAU,GACd,OAAO,CAAC,IAAI,EAAE,CAAC,WAAW,EAAE,IAAI,CAAC,gBAAgB,CAAC,CAAC,IAAI,EAAE,CAAA;gBAE3D,OAAO,IAAI,CAAC,YAAY,CAAC,YAAY,CAAC,MAAM,CAC1C;oBACE,GAAG,UAAU;oBACb,mBAAmB,EACjB,MAAA,IAAI,CAAC,mBAAmB,mCAAI,UAAU,CAAC,mBAAmB;oBAC5D,cAAc,EAAE,MAAA,IAAI,CAAC,cAAc,mCAAI,UAAU,CAAC,cAAc;oBAChE,QAAQ,EAAE,MAAA,IAAI,CAAC,QAAQ,mCAAI,UAAU,CAAC,QAAQ;iBAC/C,EACD,MAAM,CAAC,IAAI,CAAC,CACb,CAAA;YACH,CAAC;YACD;;eAEG;YACH,IAAI,eAAe;;gBACjB,OAAO,CACL,MAAA,IAAI,CAAC,QAAQ,mCAAI,cAAc,CAAC,IAAI,CAAC,cAAc,EAAE,UAAU,CAAC,CACjE,CAAA;YACH,CAAC;YACD;;eAEG;YACH,IAAI,0BAA0B;;gBAC5B,OAAO,CACL,MAAA,IAAI,CAAC,mBAAmB,mCACxB,cAAc,CAAC,IAAI,CAAC,cAAc,EAAE,qBAAqB,CAAC,CAC3D,CAAA;YACH,CAAC;YACD;;eAEG;YACH,IAAI,qBAAqB;;gBACvB,OAAO,CACL,MAAA,IAAI,CAAC,cAAc,mCACnB,cAAc,CAAC,IAAI,CAAC,cAAc,EAAE,gBAAgB,CAAC,CACtD,CAAA;YACH,CAAC;YAED;;eAEG;YACH,IAAI,kBAAkB;;gBACpB,OAAO,CAAA,MAAA,IAAI,CAAC,OAAO,0CAAE,IAAI,MAAK,eAAe;oBAC3C,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,kBAAkB,CAAC,CAAC,CAAC;yBAC7D,MAAM,GAAG,CAAC;oBACf,CAAC,CAAC,IAAI,CAAA;YACV,CAAC;YAED;;eAEG;YACH,WAAW;gBACT,MAAM,UAAU,GAAG,gBAAgB,EAAE,CAAA;gBACrC,MAAM,EAAE,OAAO,EAAE,QAAQ,EAAE,kBAAkB,EAAE,GAAG,IAAI,CAAA;gBACtD,OAAO;oBACL,GAAG,UAAU;oBACb,QAAQ,EAAE,UAAU,CAAC,QAAQ,IAAI,CAAC,IAAI,CAAC,kBAAkB;oBACzD,kBAAkB,EAAE,MAAM,CAAC,WAAW,CAAC,kBAAkB,CAAC,MAAM,EAAE,CAAC;oBAEnE,kEAAkE;oBAClE,4BAA4B;oBAC5B,OAAO,EAAE,OAAO,CAAC,CAAC,CAAC,WAAW,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,SAAS;oBACnD,QAAQ,EAAE,QAAQ,CAAC,CAAC,CAAC,WAAW,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,SAAS;iBACvD,CAAA;YACH,CAAC;SACF,CAAA;IACH,CAAC,CAAC;SACD,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB;;WAEG;QACH,oBAAoB;YAClB,IAAI,CAAC,cAAc,GAAG,CAAC,IAAI,CAAC,qBAAqB,CAAA;QACnD,CAAC;QACD;;WAEG;QACH,yBAAyB;YACvB,IAAI,CAAC,mBAAmB,GAAG,CAAC,IAAI,CAAC,0BAA0B,CAAA;QAC7D,CAAC;QACD;;WAEG;QACH,cAAc;YACZ,IAAI,CAAC,QAAQ,GAAG,CAAC,IAAI,CAAC,eAAe,CAAA;QACvC,CAAC;QACD,WAAW;YACT,WAAW,CACT,IAAI,EACJ,OAAO,CACL,KAAK,IAAI,EAAE;gBACT,IAAI;oBACF,MAAM,EAAE,OAAO,EAAE,GAAG,IAAI,CAAA;oBACxB,MAAM,IAAI,GAAG,iBAAiB,CAAC,IAAI,CAAQ,CAAA;oBAE3C,IACE,CAAC,IAAI,CAAC,WAAW;wBACjB,CAAC,IAAI,CAAC,mBAAmB;wBACzB,IAAI,CAAC,cAAc,EACnB;wBACA,OAAM;qBACP;oBACD,MAAM,EAAE,YAAY,EAAE,GAAG,IAAI,CAAA;oBAC7B,IAAI,CAAA,OAAO,aAAP,OAAO,uBAAP,OAAO,CAAE,IAAI,MAAK,eAAe,EAAE;wBACrC,MAAM,OAAO,GAAG,OAAO,CAAC,IAAI,CAAC,WAAW,EAAE,SAAS,CAAC,CAAA;wBACpD,IAAI,CAAC,0BAA0B,CAC7B,MAAM,2BAA2B,CAC/B,IAAI,EACJ,OAAO,EACP,OAAO,EACP,YAAY,CACb,CACF,CAAA;qBACF;iBACF;gBAAC,OAAO,KAAK,EAAE;oBACd,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAA;oBACpB,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAA;iBACrB;YACH,CAAC,EACD,EAAE,KAAK,EAAE,IAAI,EAAE,CAChB,CACF,CAAA;QACH,CAAC;KACF,CAAC,CAAC;SAEF,KAAK,CAAC,IAAI,CAAC,EAAE;QACZ,MAAM,EAAE,cAAc,EAAE,mBAAmB,EAAE,GAAG,IAAI,CAAA;QACpD,OAAO;YACL;;eAEG;YACH,IAAI,gBAAgB;gBAClB,OAAO,OAAO,CAAA;YAChB,CAAC;YAED;;eAEG;YACH,IAAI,aAAa;gBACf,MAAM,UAAU,GAAG,OAAO,CAAC,IAAI,CAAC,WAAW,EAAE,SAAS,CAAC,CAAA;gBACvD,OAAO;oBACL,IAAI,EAAE,oBAAoB;oBAC1B,UAAU;iBACX,CAAA;YACH,CAAC;YAED;;eAEG;YACH,IAAI,gBAAgB;gBAClB,OAAO,aAAa,CAAC,GAAG,CAAC,aAAa,CAAC,CAAA;YACzC,CAAC;YAED;;eAEG;YACH,IAAI,aAAa;gBACf,OAAO,IAAI,CAAA;YACb,CAAC;YAED;;eAEG;YACH,gBAAgB;gBACd,OAAO,EAAE,CAAA;YACX,CAAC;YAED;;eAEG;YACH,cAAc;gBACZ,OAAO;oBACL,GAAG,mBAAmB,EAAE;oBACxB;wBACE,KAAK,EAAE,oCAAoC;wBAC3C,IAAI,EAAE,UAAU;wBAChB,OAAO,EAAE,IAAI,CAAC,qBAAqB;wBACnC,OAAO,EAAE,GAAG,EAAE,CAAC,IAAI,CAAC,oBAAoB,EAAE;qBAC3C;oBACD;wBACE,KAAK,EAAE,gCAAgC;wBACvC,IAAI,EAAE,UAAU;wBAChB,OAAO,EAAE,IAAI,CAAC,0BAA0B;wBACxC,OAAO,EAAE,GAAG,EAAE,CAAC,IAAI,CAAC,yBAAyB,EAAE;qBAChD;oBACD;wBACE,KAAK,EAAE,WAAW;wBAClB,IAAI,EAAE,UAAU;wBAChB,OAAO,EAAE,IAAI,CAAC,eAAe;wBAC7B,OAAO,EAAE,GAAG,EAAE,CAAC,IAAI,CAAC,cAAc,EAAE;qBACrC;iBACF,CAAA;YACH,CAAC;SACF,CAAA;IACH,CAAC,CAAC,CAAA;AACN,CAAC;AAID,eAAe,iBAAiB,CAAA"}

package/esm/PileupRPC/rpcMethods.d.ts

@@ -1,6 +1,6 @@
 import RpcMethodType from '@jbrowse/core/pluggableElementTypes/RpcMethodType';
+import { Region } from '@jbrowse/core/util';
 import { RenderArgs } from '@jbrowse/core/rpc/coreRpcMethods';
-import { Region } from '@jbrowse/core/util/types';
 import { RemoteAbortSignal } from '@jbrowse/core/rpc/remoteAbortSignals';
 export declare class PileupGetGlobalValueForTag extends RpcMethodType {
     name: string;

package/esm/PileupRPC/rpcMethods.js

@@ -1,7 +1,8 @@
-import { getAdapter } from '@jbrowse/core/data_adapters/dataAdapterCache';
 import RpcMethodType from '@jbrowse/core/pluggableElementTypes/RpcMethodType';
+import { getAdapter } from '@jbrowse/core/data_adapters/dataAdapterCache';
 import { renameRegionsIfNeeded } from '@jbrowse/core/util';
 import { toArray } from 'rxjs/operators';
+// locals
 import { getTagAlt } from '../util';
 import { getModificationTypes } from '../BamAdapter/MismatchParser';
 export class PileupGetGlobalValueForTag extends RpcMethodType {
@@ -20,9 +21,11 @@ export class PileupGetGlobalValueForTag extends RpcMethodType {
         return super.serializeArguments(renamedArgs, rpcDriverClassName);
     }
     async execute(args, rpcDriverClassName) {
-        const deserializedArgs = await this.deserializeArguments(args, rpcDriverClassName);
-        const { adapterConfig, sessionId, regions, tag } = deserializedArgs;
-        const dataAdapter = (await getAdapter(this.pluginManager, sessionId, adapterConfig)).dataAdapter;
+        const pm = this.pluginManager;
+        const deArgs = await this.deserializeArguments(args, rpcDriverClassName);
+        const { adapterConfig, sessionId, regions, tag } = deArgs;
+        const dataAdapter = (await getAdapter(pm, sessionId, adapterConfig))
+            .dataAdapter;
         const features = dataAdapter.getFeaturesInMultipleRegions(regions);
         const featuresArray = await features.pipe(toArray()).toPromise();
         const uniqueValues = new Set();
@@ -52,9 +55,11 @@ export class PileupGetVisibleModifications extends RpcMethodType {
         return super.serializeArguments(renamedArgs, rpcDriverClassName);
     }
     async execute(args, rpcDriverClassName) {
-        const deserializedArgs = await this.deserializeArguments(args, rpcDriverClassName);
-        const { adapterConfig, sessionId, regions } = deserializedArgs;
-        const dataAdapter = (await getAdapter(this.pluginManager, sessionId, adapterConfig)).dataAdapter;
+        const pm = this.pluginManager;
+        const deArgs = await this.deserializeArguments(args, rpcDriverClassName);
+        const { adapterConfig, sessionId, regions } = deArgs;
+        const dataAdapter = (await getAdapter(pm, sessionId, adapterConfig))
+            .dataAdapter;
         const features = dataAdapter.getFeaturesInMultipleRegions(regions);
         const featuresArray = await features.pipe(toArray()).toPromise();
         const uniqueValues = new Set();

package/esm/PileupRPC/rpcMethods.js.map

@@ -1 +1 @@
-{"version":3,"file":"rpcMethods.js","sourceRoot":"","sources":["../../src/PileupRPC/rpcMethods.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,8CAA8C,CAAA;AACzE,OAAO,aAAa,MAAM,mDAAmD,CAAA;AAE7E,OAAO,EAAE,qBAAqB,EAAE,MAAM,oBAAoB,CAAA;AAG1D,OAAO,EAAE,OAAO,EAAE,MAAM,gBAAgB,CAAA;AAExC,OAAO,EAAE,SAAS,EAAE,MAAM,SAAS,CAAA;AACnC,OAAO,EAAE,oBAAoB,EAAE,MAAM,8BAA8B,CAAA;AAEnE,MAAM,OAAO,0BAA2B,SAAQ,aAAa;IAA7D;;QACE,SAAI,GAAG,4BAA4B,CAAA;IAoDrC,CAAC;IAlDC,KAAK,CAAC,kBAAkB,CACtB,IAGC,EACD,kBAA0B;;QAE1B,MAAM,EAAE,SAAS,EAAE,GAAG,IAAI,CAAC,aAAa,CAAA;QACxC,MAAM,eAAe,GAAG,MAAA,SAAS,aAAT,SAAS,uBAAT,SAAS,CAAE,OAAO,0CAAE,eAAe,CAAA;QAC3D,IAAI,CAAC,eAAe,EAAE;YACpB,MAAM,IAAI,KAAK,CAAC,+BAA+B,CAAC,CAAA;SACjD;QAED,MAAM,WAAW,GAAG,MAAM,qBAAqB,CAAC,eAAe,EAAE,IAAI,CAAC,CAAA;QAEtE,OAAO,KAAK,CAAC,kBAAkB,CAAC,WAAW,EAAE,kBAAkB,CAAC,CAAA;IAClE,CAAC;IAED,KAAK,CAAC,OAAO,CACX,IAOC,EACD,kBAA0B;QAE1B,MAAM,gBAAgB,GAAG,MAAM,IAAI,CAAC,oBAAoB,CACtD,IAAI,EACJ,kBAAkB,CACnB,CAAA;QACD,MAAM,EAAE,aAAa,EAAE,SAAS,EAAE,OAAO,EAAE,GAAG,EAAE,GAAG,gBAAgB,CAAA;QACnE,MAAM,WAAW,GAAG,CAClB,MAAM,UAAU,CAAC,IAAI,CAAC,aAAa,EAAE,SAAS,EAAE,aAAa,CAAC,CAC/D,CAAC,WAAqC,CAAA;QAEvC,MAAM,QAAQ,GAAG,WAAW,CAAC,4BAA4B,CAAC,OAAO,CAAC,CAAA;QAClE,MAAM,aAAa,GAAG,MAAM,QAAQ,CAAC,IAAI,CAAC,OAAO,EAAE,CAAC,CAAC,SAAS,EAAE,CAAA;QAChE,MAAM,YAAY,GAAG,IAAI,GAAG,EAAU,CAAA;QACtC,aAAa,CAAC,OAAO,CAAC,OAAO,CAAC,EAAE;YAC9B,MAAM,IAAI,GAAG,OAAO,CAAC,GAAG,CAAC,MAAM,CAAC,CAAA;YAChC,MAAM,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,CAAA;YAC/C,IAAI,GAAG,KAAK,SAAS,EAAE;gBACrB,YAAY,CAAC,GAAG,CAAC,GAAG,GAAG,EAAE,CAAC,CAAA;aAC3B;QACH,CAAC,CAAC,CAAA;QACF,OAAO,CAAC,GAAG,YAAY,CAAC,CAAA;IAC1B,CAAC;CACF;AAED,MAAM,OAAO,6BAA8B,SAAQ,aAAa;IAAhE;;QACE,SAAI,GAAG,+BAA+B,CAAA;IAmDxC,CAAC;IAjDC,KAAK,CAAC,kBAAkB,CACtB,IAGC,EACD,kBAA0B;;QAE1B,MAAM,EAAE,SAAS,EAAE,GAAG,IAAI,CAAC,aAAa,CAAA;QACxC,MAAM,eAAe,GAAG,MAAA,SAAS,aAAT,SAAS,uBAAT,SAAS,CAAE,OAAO,0CAAE,eAAe,CAAA;QAC3D,IAAI,CAAC,eAAe,EAAE;YACpB,MAAM,IAAI,KAAK,CAAC,+BAA+B,CAAC,CAAA;SACjD;QAED,MAAM,WAAW,GAAG,MAAM,qBAAqB,CAAC,eAAe,EAAE,IAAI,CAAC,CAAA;QAEtE,OAAO,KAAK,CAAC,kBAAkB,CAAC,WAAW,EAAE,kBAAkB,CAAC,CAAA;IAClE,CAAC;IAED,KAAK,CAAC,OAAO,CACX,IAOC,EACD,kBAA0B;QAE1B,MAAM,gBAAgB,GAAG,MAAM,IAAI,CAAC,oBAAoB,CACtD,IAAI,EACJ,kBAAkB,CACnB,CAAA;QACD,MAAM,EAAE,aAAa,EAAE,SAAS,EAAE,OAAO,EAAE,GAAG,gBAAgB,CAAA;QAC9D,MAAM,WAAW,GAAG,CAClB,MAAM,UAAU,CAAC,IAAI,CAAC,aAAa,EAAE,SAAS,EAAE,aAAa,CAAC,CAC/D,CAAC,WAAqC,CAAA;QAEvC,MAAM,QAAQ,GAAG,WAAW,CAAC,4BAA4B,CAAC,OAAO,CAAC,CAAA;QAClE,MAAM,aAAa,GAAG,MAAM,QAAQ,CAAC,IAAI,CAAC,OAAO,EAAE,CAAC,CAAC,SAAS,EAAE,CAAA;QAChE,MAAM,YAAY,GAAG,IAAI,GAAG,EAAU,CAAA;QACtC,aAAa,CAAC,OAAO,CAAC,OAAO,CAAC,EAAE;YAC9B,MAAM,GAAG,GAAI,SAAS,CAAC,OAAO,EAAE,IAAI,EAAE,IAAI,CAAY,IAAI,EAAE,CAAA;YAC5D,IAAI,GAAG,KAAK,SAAS,EAAE;gBACrB,oBAAoB,CAAC,GAAG,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAA;aAC5D;QACH,CAAC,CAAC,CAAA;QACF,OAAO,CAAC,GAAG,YAAY,CAAC,CAAA;IAC1B,CAAC;CACF"}
+{"version":3,"file":"rpcMethods.js","sourceRoot":"","sources":["../../src/PileupRPC/rpcMethods.ts"],"names":[],"mappings":"AAAA,OAAO,aAAa,MAAM,mDAAmD,CAAA;AAC7E,OAAO,EAAE,UAAU,EAAE,MAAM,8CAA8C,CAAA;AACzE,OAAO,EAAE,qBAAqB,EAAU,MAAM,oBAAoB,CAAA;AAIlE,OAAO,EAAE,OAAO,EAAE,MAAM,gBAAgB,CAAA;AAExC,SAAS;AACT,OAAO,EAAE,SAAS,EAAE,MAAM,SAAS,CAAA;AACnC,OAAO,EAAE,oBAAoB,EAAE,MAAM,8BAA8B,CAAA;AAEnE,MAAM,OAAO,0BAA2B,SAAQ,aAAa;IAA7D;;QACE,SAAI,GAAG,4BAA4B,CAAA;IAiDrC,CAAC;IA/CC,KAAK,CAAC,kBAAkB,CACtB,IAGC,EACD,kBAA0B;;QAE1B,MAAM,EAAE,SAAS,EAAE,GAAG,IAAI,CAAC,aAAa,CAAA;QACxC,MAAM,eAAe,GAAG,MAAA,SAAS,aAAT,SAAS,uBAAT,SAAS,CAAE,OAAO,0CAAE,eAAe,CAAA;QAC3D,IAAI,CAAC,eAAe,EAAE;YACpB,MAAM,IAAI,KAAK,CAAC,+BAA+B,CAAC,CAAA;SACjD;QAED,MAAM,WAAW,GAAG,MAAM,qBAAqB,CAAC,eAAe,EAAE,IAAI,CAAC,CAAA;QAEtE,OAAO,KAAK,CAAC,kBAAkB,CAAC,WAAW,EAAE,kBAAkB,CAAC,CAAA;IAClE,CAAC;IAED,KAAK,CAAC,OAAO,CACX,IAOC,EACD,kBAA0B;QAE1B,MAAM,EAAE,GAAG,IAAI,CAAC,aAAa,CAAA;QAC7B,MAAM,MAAM,GAAG,MAAM,IAAI,CAAC,oBAAoB,CAAC,IAAI,EAAE,kBAAkB,CAAC,CAAA;QACxE,MAAM,EAAE,aAAa,EAAE,SAAS,EAAE,OAAO,EAAE,GAAG,EAAE,GAAG,MAAM,CAAA;QACzD,MAAM,WAAW,GAAG,CAAC,MAAM,UAAU,CAAC,EAAE,EAAE,SAAS,EAAE,aAAa,CAAC,CAAC;aACjE,WAAqC,CAAA;QAExC,MAAM,QAAQ,GAAG,WAAW,CAAC,4BAA4B,CAAC,OAAO,CAAC,CAAA;QAClE,MAAM,aAAa,GAAG,MAAM,QAAQ,CAAC,IAAI,CAAC,OAAO,EAAE,CAAC,CAAC,SAAS,EAAE,CAAA;QAChE,MAAM,YAAY,GAAG,IAAI,GAAG,EAAU,CAAA;QACtC,aAAa,CAAC,OAAO,CAAC,OAAO,CAAC,EAAE;YAC9B,MAAM,IAAI,GAAG,OAAO,CAAC,GAAG,CAAC,MAAM,CAAC,CAAA;YAChC,MAAM,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,CAAA;YAC/C,IAAI,GAAG,KAAK,SAAS,EAAE;gBACrB,YAAY,CAAC,GAAG,CAAC,GAAG,GAAG,EAAE,CAAC,CAAA;aAC3B;QACH,CAAC,CAAC,CAAA;QACF,OAAO,CAAC,GAAG,YAAY,CAAC,CAAA;IAC1B,CAAC;CACF;AAED,MAAM,OAAO,6BAA8B,SAAQ,aAAa;IAAhE;;QACE,SAAI,GAAG,+BAA+B,CAAA;IAgDxC,CAAC;IA9CC,KAAK,CAAC,kBAAkB,CACtB,IAGC,EACD,kBAA0B;;QAE1B,MAAM,EAAE,SAAS,EAAE,GAAG,IAAI,CAAC,aAAa,CAAA;QACxC,MAAM,eAAe,GAAG,MAAA,SAAS,aAAT,SAAS,uBAAT,SAAS,CAAE,OAAO,0CAAE,eAAe,CAAA;QAC3D,IAAI,CAAC,eAAe,EAAE;YACpB,MAAM,IAAI,KAAK,CAAC,+BAA+B,CAAC,CAAA;SACjD;QAED,MAAM,WAAW,GAAG,MAAM,qBAAqB,CAAC,eAAe,EAAE,IAAI,CAAC,CAAA;QAEtE,OAAO,KAAK,CAAC,kBAAkB,CAAC,WAAW,EAAE,kBAAkB,CAAC,CAAA;IAClE,CAAC;IAED,KAAK,CAAC,OAAO,CACX,IAOC,EACD,kBAA0B;QAE1B,MAAM,EAAE,GAAG,IAAI,CAAC,aAAa,CAAA;QAC7B,MAAM,MAAM,GAAG,MAAM,IAAI,CAAC,oBAAoB,CAAC,IAAI,EAAE,kBAAkB,CAAC,CAAA;QACxE,MAAM,EAAE,aAAa,EAAE,SAAS,EAAE,OAAO,EAAE,GAAG,MAAM,CAAA;QACpD,MAAM,WAAW,GAAG,CAAC,MAAM,UAAU,CAAC,EAAE,EAAE,SAAS,EAAE,aAAa,CAAC,CAAC;aACjE,WAAqC,CAAA;QAExC,MAAM,QAAQ,GAAG,WAAW,CAAC,4BAA4B,CAAC,OAAO,CAAC,CAAA;QAClE,MAAM,aAAa,GAAG,MAAM,QAAQ,CAAC,IAAI,CAAC,OAAO,EAAE,CAAC,CAAC,SAAS,EAAE,CAAA;QAChE,MAAM,YAAY,GAAG,IAAI,GAAG,EAAU,CAAA;QACtC,aAAa,CAAC,OAAO,CAAC,OAAO,CAAC,EAAE;YAC9B,MAAM,GAAG,GAAI,SAAS,CAAC,OAAO,EAAE,IAAI,EAAE,IAAI,CAAY,IAAI,EAAE,CAAA;YAC5D,IAAI,GAAG,KAAK,SAAS,EAAE;gBACrB,oBAAoB,CAAC,GAAG,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAA;aAC5D;QACH,CAAC,CAAC,CAAA;QACF,OAAO,CAAC,GAAG,YAAY,CAAC,CAAA;IAC1B,CAAC;CACF"}

package/esm/PileupRenderer/PileupLayoutSession.d.ts

@@ -11,7 +11,7 @@ export interface PileupLayoutSessionProps {
     sortedBy: unknown;
     showSoftClip: unknown;
 }
-declare type MyMultiLayout = MultiLayout<GranularRectLayout<unknown>, unknown>;
+type MyMultiLayout = MultiLayout<GranularRectLayout<unknown>, unknown>;
 interface CachedPileupLayout {
     layout: MyMultiLayout;
     config: AnyConfigurationModel;

package/esm/PileupRenderer/PileupRenderer.d.ts

@@ -41,7 +41,7 @@ interface LayoutFeature {
 }
 export default class PileupRenderer extends BoxRendererType {
     supportsSVG: boolean;
-    getCharWidthHeight(ctx: CanvasRenderingContext2D): {
+    getCharWidthHeight(): {
         charWidth: number;
         charHeight: number;
     };