@jbrowse/core 1.5.8 → 1.5.9

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Files changed (125) hide show
  1. package/BaseFeatureWidget/BaseFeatureDetail.js +6 -6
  2. package/BaseFeatureWidget/SequenceFeatureDetails.js +11 -11
  3. package/BaseFeatureWidget/SequenceFeatureDetails.test.js +1 -1
  4. package/BaseFeatureWidget/index.test.js +1 -1
  5. package/BaseFeatureWidget/util.js +3 -3
  6. package/CorePlugin.js +7 -7
  7. package/Plugin.js +3 -3
  8. package/PluginLoader.js +20 -20
  9. package/PluginManager.js +6 -6
  10. package/ReExports/index.js +1 -1
  11. package/ReExports/material-ui-colors.js +1 -1
  12. package/ReExports/modules.js +2 -2
  13. package/TextSearch/BaseResults.js +5 -5
  14. package/TextSearch/BaseResults.test.js +1 -1
  15. package/TextSearch/TextSearchManager.js +8 -8
  16. package/assemblyManager/assembly.js +23 -23
  17. package/assemblyManager/assemblyManager.js +11 -11
  18. package/assemblyManager/index.js +1 -1
  19. package/configuration/configurationSchema.js +5 -5
  20. package/configuration/configurationSlot.js +2 -2
  21. package/configuration/configurationSlot.test.js +1 -1
  22. package/configuration/util.js +3 -3
  23. package/data_adapters/BaseAdapter.js +22 -22
  24. package/data_adapters/BaseAdapter.test.js +15 -15
  25. package/data_adapters/CytobandAdapter.js +10 -10
  26. package/data_adapters/dataAdapterCache.js +6 -6
  27. package/package.json +2 -2
  28. package/pluggableElementTypes/AdapterType.js +9 -9
  29. package/pluggableElementTypes/ConnectionType.js +5 -5
  30. package/pluggableElementTypes/DisplayType.js +5 -5
  31. package/pluggableElementTypes/InternetAccountType.js +5 -5
  32. package/pluggableElementTypes/PluggableElementBase.js +3 -3
  33. package/pluggableElementTypes/RpcMethodType.js +23 -23
  34. package/pluggableElementTypes/RpcMethodType.test.js +11 -11
  35. package/pluggableElementTypes/TextSearchAdapterType.js +5 -5
  36. package/pluggableElementTypes/TrackType.js +5 -5
  37. package/pluggableElementTypes/ViewType.js +5 -5
  38. package/pluggableElementTypes/WidgetType.js +5 -5
  39. package/pluggableElementTypes/index.js +1 -1
  40. package/pluggableElementTypes/models/BaseConnectionModelFactory.js +2 -2
  41. package/pluggableElementTypes/models/BaseDisplayModel.js +2 -2
  42. package/pluggableElementTypes/models/BaseTrackModel.js +3 -3
  43. package/pluggableElementTypes/models/InternetAccountModel.js +5 -5
  44. package/pluggableElementTypes/models/baseTrackConfig.js +2 -2
  45. package/pluggableElementTypes/models/index.js +1 -1
  46. package/pluggableElementTypes/renderers/BoxRendererType.js +15 -15
  47. package/pluggableElementTypes/renderers/CircularChordRendererType.js +5 -5
  48. package/pluggableElementTypes/renderers/ComparativeServerSideRendererType.js +14 -14
  49. package/pluggableElementTypes/renderers/FeatureRendererType.js +14 -14
  50. package/pluggableElementTypes/renderers/RendererType.js +9 -9
  51. package/pluggableElementTypes/renderers/ServerSideRenderedContent.js +3 -3
  52. package/pluggableElementTypes/renderers/ServerSideRendererType.js +15 -15
  53. package/pluggableElementTypes/renderers/index.js +1 -1
  54. package/pluggableElementTypes/renderers/util/serializableFilterChain.js +3 -3
  55. package/pluggableElementTypes/renderers/util/serializableFilterChain.test.js +1 -1
  56. package/rpc/BaseRpcDriver.js +15 -15
  57. package/rpc/BaseRpcDriver.test.js +24 -24
  58. package/rpc/MainThreadRpcDriver.js +11 -11
  59. package/rpc/RpcManager.js +9 -9
  60. package/rpc/WebWorkerRpcDriver.js +12 -12
  61. package/rpc/coreRpcMethods.js +30 -30
  62. package/rpc/remoteAbortSignals.js +2 -2
  63. package/ui/AboutDialog.js +7 -7
  64. package/ui/App.js +3 -3
  65. package/ui/AssemblySelector.js +1 -1
  66. package/ui/Drawer.js +1 -1
  67. package/ui/DrawerWidget.js +3 -3
  68. package/ui/DropDownMenu.js +3 -3
  69. package/ui/EditableTypography.js +5 -5
  70. package/ui/ErrorMessage.js +1 -1
  71. package/ui/FactoryResetDialog.js +1 -1
  72. package/ui/FatalErrorDialog.js +3 -3
  73. package/ui/FatalErrorDialog.test.js +7 -7
  74. package/ui/FileSelector/FileSelector.js +6 -6
  75. package/ui/FileSelector/LocalFileChooser.js +1 -1
  76. package/ui/FileSelector/UrlChooser.js +1 -1
  77. package/ui/FileSelector/index.js +1 -1
  78. package/ui/Icons.js +1 -1
  79. package/ui/Logo.js +1 -1
  80. package/ui/Menu.js +5 -5
  81. package/ui/NewSessionCards.js +4 -4
  82. package/ui/PrerenderedCanvas.js +4 -4
  83. package/ui/ResizeHandle.js +4 -4
  84. package/ui/SanitizedHTML.js +1 -1
  85. package/ui/SanitizedHTML.test.js +1 -1
  86. package/ui/Snackbar.js +3 -3
  87. package/ui/Tooltip.js +3 -3
  88. package/ui/ViewContainer.js +4 -4
  89. package/ui/index.js +2 -2
  90. package/ui/theme.js +2 -2
  91. package/util/Base1DViewModel.js +2 -2
  92. package/util/Base1DViewModel.test.js +1 -1
  93. package/util/QuickLRU.js +12 -12
  94. package/util/aborting.js +10 -10
  95. package/util/analytics.js +7 -7
  96. package/util/blockTypes.js +6 -6
  97. package/util/calculateDynamicBlocks.js +2 -2
  98. package/util/calculateDynamicBlocks.test.js +2 -2
  99. package/util/calculateStaticBlocks.test.js +1 -1
  100. package/util/compositeMap.js +13 -13
  101. package/util/idMaker.js +2 -2
  102. package/util/index.js +19 -19
  103. package/util/index.test.js +3 -3
  104. package/util/io/RemoteFileWithRangeCache.js +16 -16
  105. package/util/io/index.js +5 -5
  106. package/util/jexl.js +1 -1
  107. package/util/jexlStrings.js +1 -1
  108. package/util/jexlStrings.test.js +1 -1
  109. package/util/layouts/GranularRectLayout.js +5 -5
  110. package/util/layouts/GranularRectLayout.test.js +2 -2
  111. package/util/layouts/MultiLayout.js +5 -5
  112. package/util/layouts/PrecomputedLayout.js +4 -4
  113. package/util/layouts/PrecomputedMultiLayout.js +6 -6
  114. package/util/layouts/SceneGraph.js +4 -4
  115. package/util/layouts/index.js +1 -1
  116. package/util/offscreenCanvasPonyfill.js +10 -10
  117. package/util/offscreenCanvasUtils.js +5 -5
  118. package/util/range.test.js +2 -2
  119. package/util/simpleFeature.js +5 -5
  120. package/util/simpleFeature.test.js +1 -1
  121. package/util/stats.js +6 -6
  122. package/util/stats.test.js +5 -5
  123. package/util/types/index.js +8 -8
  124. package/util/types/mst.js +3 -3
  125. package/util/when.js +5 -5
package/ui/Tooltip.js CHANGED
@@ -1,15 +1,15 @@
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  "use strict";
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- var _interopRequireWildcard = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireWildcard.js")["default"];
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+ var _interopRequireWildcard = require("@babel/runtime/helpers/interopRequireWildcard")["default"];
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- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
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+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
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  Object.defineProperty(exports, "__esModule", {
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  value: true
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  });
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  exports["default"] = void 0;
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- var _slicedToArray2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/slicedToArray.js"));
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+ var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/slicedToArray"));
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  var _react = _interopRequireWildcard(require("react"));
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package/ui/ViewContainer.js CHANGED
@@ -1,17 +1,17 @@
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  "use strict";
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- var _interopRequireWildcard = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireWildcard.js")["default"];
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+ var _interopRequireWildcard = require("@babel/runtime/helpers/interopRequireWildcard")["default"];
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- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
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+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
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  Object.defineProperty(exports, "__esModule", {
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  value: true
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  });
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  exports["default"] = void 0;
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- var _objectSpread2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/objectSpread2.js"));
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+ var _objectSpread2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/objectSpread2"));
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- var _slicedToArray2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/slicedToArray.js"));
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+ var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/slicedToArray"));
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  var _core = require("@material-ui/core");
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package/ui/index.js CHANGED
@@ -1,8 +1,8 @@
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  "use strict";
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- var _interopRequireWildcard = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireWildcard.js")["default"];
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+ var _interopRequireWildcard = require("@babel/runtime/helpers/interopRequireWildcard")["default"];
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- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
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+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
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  value: true
package/ui/theme.js CHANGED
@@ -1,6 +1,6 @@
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  "use strict";
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- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
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+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
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  Object.defineProperty(exports, "__esModule", {
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  value: true
@@ -10,7 +10,7 @@ exports.createJBrowseDefaultProps = createJBrowseDefaultProps;
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  exports.createJBrowseTheme = createJBrowseTheme;
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  exports.jbrowseDefaultPalette = exports.jbrowseBaseTheme = void 0;
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- var _objectSpread2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/objectSpread2.js"));
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+ var _objectSpread2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/objectSpread2"));
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  var _colors = require("@material-ui/core/colors");
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package/util/Base1DViewModel.js CHANGED
@@ -1,13 +1,13 @@
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  "use strict";
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- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
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+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
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  Object.defineProperty(exports, "__esModule", {
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  value: true
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  });
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  exports["default"] = void 0;
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- var _objectSpread2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/objectSpread2.js"));
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+ var _objectSpread2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/objectSpread2"));
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  var _mobxStateTree = require("mobx-state-tree");
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package/util/Base1DViewModel.test.js CHANGED
@@ -1,6 +1,6 @@
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  "use strict";
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- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
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+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
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  var _Base1DViewModel = _interopRequireDefault(require("./Base1DViewModel"));
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package/util/QuickLRU.js CHANGED
@@ -1,21 +1,21 @@
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- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
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+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
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  value: true
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  exports["default"] = void 0;
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- var _index = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/regenerator/index.js"));
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+ var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
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- var _slicedToArray2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/slicedToArray.js"));
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+ var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/slicedToArray"));
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- var _createForOfIteratorHelper2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/createForOfIteratorHelper.js"));
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+ var _createForOfIteratorHelper2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createForOfIteratorHelper"));
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- var _classCallCheck2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/classCallCheck.js"));
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+ var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/classCallCheck"));
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- var _createClass2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/createClass.js"));
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+ var _createClass2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createClass"));
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@@ -118,10 +118,10 @@ var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
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- value: /*#__PURE__*/_index["default"].mark(function keys() {
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+ value: /*#__PURE__*/_regenerator["default"].mark(function keys() {
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+ return _regenerator["default"].wrap(function keys$(_context) {
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package/util/aborting.js CHANGED
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+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
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@@ -11,19 +11,19 @@ exports.isAbortException = isAbortException;
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+ var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
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+ var _asyncToGenerator2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/asyncToGenerator"));
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+ var _createClass2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createClass"));
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+ var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/classCallCheck"));
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+ var _inherits2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/inherits"));
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+ var _createSuper2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createSuper"));
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+ var _wrapNativeSuper2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/wrapNativeSuper"));
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package/util/analytics.js CHANGED
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@@ -8,9 +8,9 @@ Object.defineProperty(exports, "__esModule", {
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- _writeAWSAnalytics = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee(rootModel, initialTimeStamp, sessionQuery) {
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+ _writeAWSAnalytics = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee(rootModel, initialTimeStamp, sessionQuery) {
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  var url, multiAssemblyTracks, savedSessionCount, config, session, ver, tracks, assemblies, plugins, stats, qs;
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+ return _regenerator["default"].wrap(function _callee$(_context) {
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+ _writeGAAnalytics = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2(rootModel, initialTimestamp) {
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  switch (_context2.prev = _context2.next) {
114
114
  case 0:
package/util/blockTypes.js CHANGED
@@ -1,21 +1,21 @@
1
1
  "use strict";
2
2
 
3
- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
3
+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
4
4
 
5
5
  Object.defineProperty(exports, "__esModule", {
6
6
  value: true
7
7
  });
8
8
  exports.InterRegionPaddingBlock = exports.ElidedBlock = exports.ContentBlock = exports.BlockSet = exports.BaseBlock = void 0;
9
9
 
10
- var _inherits2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/inherits.js"));
10
+ var _inherits2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/inherits"));
11
11
 
12
- var _createSuper2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/createSuper.js"));
12
+ var _createSuper2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createSuper"));
13
13
 
14
- var _objectSpread2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/objectSpread2.js"));
14
+ var _objectSpread2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/objectSpread2"));
15
15
 
16
- var _classCallCheck2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/classCallCheck.js"));
16
+ var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/classCallCheck"));
17
17
 
18
- var _createClass2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/createClass.js"));
18
+ var _createClass2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createClass"));
19
19
 
20
20
  var BlockSet = /*#__PURE__*/function () {
21
21
  function BlockSet() {
package/util/calculateDynamicBlocks.js CHANGED
@@ -1,13 +1,13 @@
1
1
  "use strict";
2
2
 
3
- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
3
+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
4
4
 
5
5
  Object.defineProperty(exports, "__esModule", {
6
6
  value: true
7
7
  });
8
8
  exports["default"] = calculateDynamicBlocks;
9
9
 
10
- var _slicedToArray2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/slicedToArray.js"));
10
+ var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/slicedToArray"));
11
11
 
12
12
  var _range = require("./range");
13
13
 
package/util/calculateDynamicBlocks.test.js CHANGED
@@ -1,8 +1,8 @@
1
1
  "use strict";
2
2
 
3
- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
3
+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
4
4
 
5
- var _objectSpread2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/objectSpread2.js"));
5
+ var _objectSpread2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/objectSpread2"));
6
6
 
7
7
  var _calculateDynamicBlocks = _interopRequireDefault(require("./calculateDynamicBlocks"));
8
8
 
package/util/calculateStaticBlocks.test.js CHANGED
@@ -1,6 +1,6 @@
1
1
  "use strict";
2
2
 
3
- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
3
+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
4
4
 
5
5
  var _calculateStaticBlocks = _interopRequireDefault(require("./calculateStaticBlocks"));
6
6
 
package/util/compositeMap.js CHANGED
@@ -1,19 +1,19 @@
1
1
  "use strict";
2
2
 
3
- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
3
+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
4
4
 
5
5
  Object.defineProperty(exports, "__esModule", {
6
6
  value: true
7
7
  });
8
8
  exports["default"] = void 0;
9
9
 
10
- var _index = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/regenerator/index.js"));
10
+ var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
11
11
 
12
- var _createForOfIteratorHelper2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/createForOfIteratorHelper.js"));
12
+ var _createForOfIteratorHelper2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createForOfIteratorHelper"));
13
13
 
14
- var _classCallCheck2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/classCallCheck.js"));
14
+ var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/classCallCheck"));
15
15
 
16
- var _createClass2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/createClass.js"));
16
+ var _createClass2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createClass"));
17
17
 
18
18
  // takes an array or Map or Set (anything iterable with values()) of Maps
19
19
  // and lets you query them as one Map
@@ -69,10 +69,10 @@ var CompositeMap = /*#__PURE__*/function (_Symbol$iterator) {
69
69
  }
70
70
  }, {
71
71
  key: "values",
72
- value: /*#__PURE__*/_index["default"].mark(function values() {
72
+ value: /*#__PURE__*/_regenerator["default"].mark(function values() {
73
73
  var _iterator3, _step3, key;
74
74
 
75
- return _index["default"].wrap(function values$(_context) {
75
+ return _regenerator["default"].wrap(function values$(_context) {
76
76
  while (1) {
77
77
  switch (_context.prev = _context.next) {
78
78
  case 0:
@@ -121,10 +121,10 @@ var CompositeMap = /*#__PURE__*/function (_Symbol$iterator) {
121
121
  })
122
122
  }, {
123
123
  key: "keys",
124
- value: /*#__PURE__*/_index["default"].mark(function keys() {
124
+ value: /*#__PURE__*/_regenerator["default"].mark(function keys() {
125
125
  var keys, _iterator4, _step4, submap, _iterator6, _step6, key, _iterator5, _step5, _key;
126
126
 
127
- return _index["default"].wrap(function keys$(_context2) {
127
+ return _regenerator["default"].wrap(function keys$(_context2) {
128
128
  while (1) {
129
129
  switch (_context2.prev = _context2.next) {
130
130
  case 0:
@@ -234,10 +234,10 @@ var CompositeMap = /*#__PURE__*/function (_Symbol$iterator) {
234
234
  }
235
235
  }, {
236
236
  key: _Symbol$iterator,
237
- value: /*#__PURE__*/_index["default"].mark(function value() {
237
+ value: /*#__PURE__*/_regenerator["default"].mark(function value() {
238
238
  var _iterator9, _step9, key;
239
239
 
240
- return _index["default"].wrap(function value$(_context3) {
240
+ return _regenerator["default"].wrap(function value$(_context3) {
241
241
  while (1) {
242
242
  switch (_context3.prev = _context3.next) {
243
243
  case 0:
@@ -286,10 +286,10 @@ var CompositeMap = /*#__PURE__*/function (_Symbol$iterator) {
286
286
  })
287
287
  }, {
288
288
  key: "entries",
289
- value: /*#__PURE__*/_index["default"].mark(function entries() {
289
+ value: /*#__PURE__*/_regenerator["default"].mark(function entries() {
290
290
  var _iterator10, _step10, k;
291
291
 
292
- return _index["default"].wrap(function entries$(_context4) {
292
+ return _regenerator["default"].wrap(function entries$(_context4) {
293
293
  while (1) {
294
294
  switch (_context4.prev = _context4.next) {
295
295
  case 0:
package/util/idMaker.js CHANGED
@@ -1,13 +1,13 @@
1
1
  "use strict";
2
2
 
3
- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
3
+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
4
4
 
5
5
  Object.defineProperty(exports, "__esModule", {
6
6
  value: true
7
7
  });
8
8
  exports["default"] = idMaker;
9
9
 
10
- var _typeof2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/typeof.js"));
10
+ var _typeof2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/typeof"));
11
11
 
12
12
  var _ = require("./");
13
13
 
package/util/index.js CHANGED
@@ -1,8 +1,8 @@
1
1
  "use strict";
2
2
 
3
- var _interopRequireWildcard = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireWildcard.js")["default"];
3
+ var _interopRequireWildcard = require("@babel/runtime/helpers/interopRequireWildcard")["default"];
4
4
 
5
- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
5
+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
6
6
 
7
7
  Object.defineProperty(exports, "__esModule", {
8
8
  value: true
@@ -111,19 +111,19 @@ exports.updateStatus = updateStatus;
111
111
  exports.useDebounce = useDebounce;
112
112
  exports.useDebouncedCallback = useDebouncedCallback;
113
113
 
114
- var _index = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/regenerator/index.js"));
114
+ var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
115
115
 
116
- var _objectSpread2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/objectSpread2.js"));
116
+ var _objectSpread2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/objectSpread2"));
117
117
 
118
- var _asyncToGenerator2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/asyncToGenerator.js"));
118
+ var _asyncToGenerator2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/asyncToGenerator"));
119
119
 
120
- var _createForOfIteratorHelper2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/createForOfIteratorHelper.js"));
120
+ var _createForOfIteratorHelper2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createForOfIteratorHelper"));
121
121
 
122
- var _toConsumableArray2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/toConsumableArray.js"));
122
+ var _toConsumableArray2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/toConsumableArray"));
123
123
 
124
- var _slicedToArray2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/slicedToArray.js"));
124
+ var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/slicedToArray"));
125
125
 
126
- var _typeof2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/typeof.js"));
126
+ var _typeof2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/typeof"));
127
127
 
128
128
  var _mobxStateTree = require("mobx-state-tree");
129
129
 
@@ -239,11 +239,11 @@ function useDebounce(value, delay) {
239
239
  setDebouncedValue = _useState2[1];
240
240
 
241
241
  (0, _react.useEffect)(function () {
242
- var handler = setTimeout(function () {
242
+ var handle = setTimeout(function () {
243
243
  setDebouncedValue(value);
244
244
  }, delay);
245
245
  return function () {
246
- clearTimeout(handler);
246
+ clearTimeout(handle);
247
247
  };
248
248
  }, [value, delay]);
249
249
  return debouncedValue;
@@ -845,9 +845,9 @@ function makeAbortableReaction(self, dataFunction, asyncReactionFunction, reacti
845
845
  return undefined;
846
846
  }
847
847
  }, /*#__PURE__*/function () {
848
- var _ref = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee(data, mobxReactionHandle) {
848
+ var _ref = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee(data, mobxReactionHandle) {
849
849
  var thisInProgress, result;
850
- return _index["default"].wrap(function _callee$(_context) {
850
+ return _regenerator["default"].wrap(function _callee$(_context) {
851
851
  while (1) {
852
852
  switch (_context.prev = _context.next) {
853
853
  case 0:
@@ -943,10 +943,10 @@ function renameRegionsIfNeeded(_x3, _x4) {
943
943
  }
944
944
 
945
945
  function _renameRegionsIfNeeded() {
946
- _renameRegionsIfNeeded = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee3(assemblyManager, args) {
946
+ _renameRegionsIfNeeded = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee3(assemblyManager, args) {
947
947
  var _args$regions, regions, adapterConfig, assemblyNames, assemblyMaps;
948
948
 
949
- return _index["default"].wrap(function _callee3$(_context3) {
949
+ return _regenerator["default"].wrap(function _callee3$(_context3) {
950
950
  while (1) {
951
951
  switch (_context3.prev = _context3.next) {
952
952
  case 0:
@@ -966,8 +966,8 @@ function _renameRegionsIfNeeded() {
966
966
  _context3.t0 = Object;
967
967
  _context3.next = 7;
968
968
  return Promise.all(assemblyNames.map( /*#__PURE__*/function () {
969
- var _ref3 = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee2(assemblyName) {
970
- return _index["default"].wrap(function _callee2$(_context2) {
969
+ var _ref3 = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2(assemblyName) {
970
+ return _regenerator["default"].wrap(function _callee2$(_context2) {
971
971
  while (1) {
972
972
  switch (_context2.prev = _context2.next) {
973
973
  case 0:
@@ -1236,9 +1236,9 @@ function updateStatus(_x5, _x6, _x7) {
1236
1236
  }
1237
1237
 
1238
1238
  function _updateStatus() {
1239
- _updateStatus = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee4(statusMsg, statusCallback, fn) {
1239
+ _updateStatus = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee4(statusMsg, statusCallback, fn) {
1240
1240
  var result;
1241
- return _index["default"].wrap(function _callee4$(_context4) {
1241
+ return _regenerator["default"].wrap(function _callee4$(_context4) {
1242
1242
  while (1) {
1243
1243
  switch (_context4.prev = _context4.next) {
1244
1244
  case 0:
package/util/index.test.js CHANGED
@@ -1,10 +1,10 @@
1
1
  "use strict";
2
2
 
3
- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
3
+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
4
4
 
5
- var _objectSpread2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/objectSpread2.js"));
5
+ var _objectSpread2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/objectSpread2"));
6
6
 
7
- var _slicedToArray2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/slicedToArray.js"));
7
+ var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/slicedToArray"));
8
8
 
9
9
  var _index = require("./index");
10
10
 
package/util/io/RemoteFileWithRangeCache.js CHANGED
@@ -1,6 +1,6 @@
1
1
  "use strict";
2
2
 
3
- var _interopRequireDefault = require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
3
+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
4
4
 
5
5
  Object.defineProperty(exports, "__esModule", {
6
6
  value: true
@@ -8,27 +8,27 @@ Object.defineProperty(exports, "__esModule", {
8
8
  exports.RemoteFileWithRangeCache = void 0;
9
9
  exports.clearCache = clearCache;
10
10
 
11
- var _index = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/regenerator/index.js"));
11
+ var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
12
12
 
13
- var _createForOfIteratorHelper2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/createForOfIteratorHelper.js"));
13
+ var _createForOfIteratorHelper2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createForOfIteratorHelper"));
14
14
 
15
- var _objectSpread2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/objectSpread2.js"));
15
+ var _objectSpread2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/objectSpread2"));
16
16
 
17
- var _slicedToArray2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/slicedToArray.js"));
17
+ var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/slicedToArray"));
18
18
 
19
- var _asyncToGenerator2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/asyncToGenerator.js"));
19
+ var _asyncToGenerator2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/asyncToGenerator"));
20
20
 
21
- var _classCallCheck2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/classCallCheck.js"));
21
+ var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/classCallCheck"));
22
22
 
23
- var _createClass2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/createClass.js"));
23
+ var _createClass2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createClass"));
24
24
 
25
- var _get2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/get.js"));
25
+ var _get2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/get"));
26
26
 
27
- var _getPrototypeOf2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/getPrototypeOf.js"));
27
+ var _getPrototypeOf2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/getPrototypeOf"));
28
28
 
29
- var _inherits2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/inherits.js"));
29
+ var _inherits2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/inherits"));
30
30
 
31
- var _createSuper2 = _interopRequireDefault(require("/data/jbrowse-components2/node_modules/@babel/runtime/helpers/esm/createSuper.js"));
31
+ var _createSuper2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createSuper"));
32
32
 
33
33
  var _httpRangeFetcher = require("http-range-fetcher");
34
34
 
@@ -78,10 +78,10 @@ var RemoteFileWithRangeCache = /*#__PURE__*/function (_RemoteFile) {
78
78
  (0, _createClass2["default"])(RemoteFileWithRangeCache, [{
79
79
  key: "fetch",
80
80
  value: function () {
81
- var _fetch = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee(url, init) {
81
+ var _fetch = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee(url, init) {
82
82
  var requestHeaders, range, _ref, _ref2, rangeParse, _rangeParse, _start, _end, s, e, response, headers;
83
83
 
84
- return _index["default"].wrap(function _callee$(_context) {
84
+ return _regenerator["default"].wrap(function _callee$(_context) {
85
85
  while (1) {
86
86
  switch (_context.prev = _context.next) {
87
87
  case 0:
@@ -158,7 +158,7 @@ var RemoteFileWithRangeCache = /*#__PURE__*/function (_RemoteFile) {
158
158
  }, {
159
159
  key: "fetchBinaryRange",
160
160
  value: function () {
161
- var _fetchBinaryRange = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee2(url, start, end) {
161
+ var _fetchBinaryRange = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2(url, start, end) {
162
162
  var options,
163
163
  requestDate,
164
164
  requestHeaders,
@@ -175,7 +175,7 @@ var RemoteFileWithRangeCache = /*#__PURE__*/function (_RemoteFile) {
175
175
  arrayBuffer,
176
176
  _args2 = arguments;
177
177
 
178
- return _index["default"].wrap(function _callee2$(_context2) {
178
+ return _regenerator["default"].wrap(function _callee2$(_context2) {
179
179
  while (1) {
180
180
  switch (_context2.prev = _context2.next) {
181
181
  case 0: