@jbrowse/core 1.5.5 → 1.5.9

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (139) hide show
  1. package/BaseFeatureWidget/BaseFeatureDetail.js +78 -91
  2. package/BaseFeatureWidget/SequenceFeatureDetails.js +56 -64
  3. package/BaseFeatureWidget/SequenceFeatureDetails.test.js +9 -9
  4. package/BaseFeatureWidget/index.js +1 -1
  5. package/BaseFeatureWidget/index.test.js +3 -3
  6. package/BaseFeatureWidget/types.js +5 -1
  7. package/BaseFeatureWidget/util.js +9 -13
  8. package/CorePlugin.js +19 -31
  9. package/Plugin.js +11 -13
  10. package/PluginLoader.js +32 -37
  11. package/PluginManager.js +55 -56
  12. package/ReExports/index.js +4 -4
  13. package/ReExports/list.js +2 -2
  14. package/ReExports/material-ui-colors.js +20 -20
  15. package/ReExports/modules.js +47 -51
  16. package/TextSearch/BaseResults.js +24 -34
  17. package/TextSearch/BaseResults.test.js +3 -7
  18. package/TextSearch/TextSearchManager.js +15 -16
  19. package/assemblyManager/assembly.js +33 -38
  20. package/assemblyManager/assemblyConfigSchema.js +2 -2
  21. package/assemblyManager/assemblyManager.js +15 -19
  22. package/assemblyManager/index.js +3 -3
  23. package/configuration/configurationSchema.js +17 -19
  24. package/configuration/configurationSlot.js +11 -11
  25. package/configuration/configurationSlot.test.js +5 -5
  26. package/configuration/util.js +5 -5
  27. package/data_adapters/BaseAdapter.js +37 -39
  28. package/data_adapters/BaseAdapter.test.js +23 -29
  29. package/data_adapters/CytobandAdapter.js +15 -21
  30. package/data_adapters/dataAdapterCache.js +8 -8
  31. package/package.json +3 -4
  32. package/pluggableElementTypes/AdapterType.js +21 -30
  33. package/pluggableElementTypes/ConnectionType.js +18 -28
  34. package/pluggableElementTypes/DisplayType.js +17 -27
  35. package/pluggableElementTypes/InternetAccountType.js +14 -24
  36. package/pluggableElementTypes/PluggableElementBase.js +8 -10
  37. package/pluggableElementTypes/RpcMethodType.js +40 -54
  38. package/pluggableElementTypes/RpcMethodType.test.js +16 -22
  39. package/pluggableElementTypes/TextSearchAdapterType.js +15 -25
  40. package/pluggableElementTypes/TrackType.js +15 -25
  41. package/pluggableElementTypes/ViewType.js +15 -25
  42. package/pluggableElementTypes/WidgetType.js +17 -27
  43. package/pluggableElementTypes/index.js +11 -11
  44. package/pluggableElementTypes/models/BaseConnectionModelFactory.js +5 -5
  45. package/pluggableElementTypes/models/BaseDisplayModel.js +5 -8
  46. package/pluggableElementTypes/models/BaseTrackModel.js +8 -11
  47. package/pluggableElementTypes/models/BaseViewModel.js +3 -3
  48. package/pluggableElementTypes/models/InternetAccountModel.js +4 -4
  49. package/pluggableElementTypes/models/baseConnectionConfig.js +2 -2
  50. package/pluggableElementTypes/models/baseTrackConfig.js +4 -7
  51. package/pluggableElementTypes/models/index.js +4 -4
  52. package/pluggableElementTypes/renderers/BoxRendererType.js +38 -48
  53. package/pluggableElementTypes/renderers/CircularChordRendererType.js +12 -18
  54. package/pluggableElementTypes/renderers/ComparativeServerSideRendererType.js +26 -34
  55. package/pluggableElementTypes/renderers/FeatureRendererType.js +35 -45
  56. package/pluggableElementTypes/renderers/RendererType.js +20 -30
  57. package/pluggableElementTypes/renderers/ServerSideRenderedContent.js +8 -12
  58. package/pluggableElementTypes/renderers/ServerSideRendererType.js +30 -43
  59. package/pluggableElementTypes/renderers/index.js +8 -8
  60. package/pluggableElementTypes/renderers/util/serializableFilterChain.js +8 -10
  61. package/pluggableElementTypes/renderers/util/serializableFilterChain.test.js +2 -2
  62. package/rpc/BaseRpcDriver.js +37 -40
  63. package/rpc/BaseRpcDriver.test.js +48 -62
  64. package/rpc/MainThreadRpcDriver.js +21 -31
  65. package/rpc/RpcManager.js +19 -18
  66. package/rpc/WebWorkerRpcDriver.js +28 -37
  67. package/rpc/configSchema.js +2 -2
  68. package/rpc/coreRpcMethods.js +71 -81
  69. package/rpc/remoteAbortSignals.js +3 -3
  70. package/ui/AboutDialog.js +16 -20
  71. package/ui/App.js +38 -42
  72. package/ui/AssemblySelector.js +5 -5
  73. package/ui/Drawer.js +7 -7
  74. package/ui/DrawerWidget.js +33 -37
  75. package/ui/DropDownMenu.js +9 -21
  76. package/ui/EditableTypography.js +19 -30
  77. package/ui/ErrorMessage.js +5 -5
  78. package/ui/FactoryResetDialog.js +8 -8
  79. package/ui/FatalErrorDialog.js +12 -29
  80. package/ui/FatalErrorDialog.test.js +10 -10
  81. package/ui/FileSelector/FileSelector.js +32 -42
  82. package/ui/FileSelector/LocalFileChooser.js +9 -9
  83. package/ui/FileSelector/UrlChooser.js +4 -4
  84. package/ui/FileSelector/index.js +4 -4
  85. package/ui/Icons.js +9 -9
  86. package/ui/Logo.js +19 -19
  87. package/ui/Menu.js +35 -46
  88. package/ui/NewSessionCards.js +19 -29
  89. package/ui/PrerenderedCanvas.js +10 -27
  90. package/ui/ResizeHandle.js +10 -17
  91. package/ui/SanitizedHTML.js +5 -5
  92. package/ui/SanitizedHTML.test.js +4 -4
  93. package/ui/Snackbar.js +12 -16
  94. package/ui/SnackbarModel.js +1 -1
  95. package/ui/Tooltip.js +7 -11
  96. package/ui/ViewContainer.js +20 -30
  97. package/ui/index.js +13 -17
  98. package/ui/theme.js +11 -15
  99. package/util/Base1DViewModel.js +10 -14
  100. package/util/Base1DViewModel.test.js +5 -5
  101. package/util/QuickLRU.js +26 -30
  102. package/util/aborting.js +15 -25
  103. package/util/analytics.js +6 -6
  104. package/util/blockTypes.js +39 -49
  105. package/util/calculateDynamicBlocks.js +4 -4
  106. package/util/calculateDynamicBlocks.test.js +10 -14
  107. package/util/calculateStaticBlocks.js +1 -1
  108. package/util/calculateStaticBlocks.test.js +15 -15
  109. package/util/compositeMap.js +27 -30
  110. package/util/idMaker.js +4 -4
  111. package/util/index.js +34 -45
  112. package/util/index.test.js +7 -11
  113. package/util/io/RemoteFileWithRangeCache.js +28 -40
  114. package/util/io/index.js +5 -5
  115. package/util/jexl.js +8 -5
  116. package/util/jexlStrings.js +2 -2
  117. package/util/jexlStrings.test.js +2 -2
  118. package/util/layouts/BaseLayout.js +5 -1
  119. package/util/layouts/GranularRectLayout.js +27 -33
  120. package/util/layouts/GranularRectLayout.test.js +10 -10
  121. package/util/layouts/MultiLayout.js +14 -19
  122. package/util/layouts/PrecomputedLayout.js +14 -16
  123. package/util/layouts/PrecomputedMultiLayout.js +17 -23
  124. package/util/layouts/SceneGraph.js +18 -18
  125. package/util/layouts/index.js +6 -6
  126. package/util/offscreenCanvasPonyfill.js +28 -30
  127. package/util/offscreenCanvasUtils.js +5 -5
  128. package/util/range.test.js +20 -20
  129. package/util/rxjs.js +2 -2
  130. package/util/simpleFeature.js +19 -24
  131. package/util/simpleFeature.test.js +3 -3
  132. package/util/stats.js +6 -10
  133. package/util/stats.test.js +14 -14
  134. package/util/types/index.js +32 -34
  135. package/util/types/mst.js +15 -19
  136. package/util/types/util.js +5 -1
  137. package/util/when.js +5 -5
  138. package/babel.config.d.ts +0 -15
  139. package/babel.config.js +0 -19
@@ -1,19 +1,17 @@
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  "use strict";
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- var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
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+ var _interopRequireWildcard = require("@babel/runtime/helpers/interopRequireWildcard")["default"];
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- var _typeof = require("@babel/runtime/helpers/typeof");
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+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
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  Object.defineProperty(exports, "__esModule", {
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  value: true
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  });
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- exports.default = void 0;
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+ exports["default"] = void 0;
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- var _defineProperty2 = _interopRequireDefault(require("@babel/runtime/helpers/defineProperty"));
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+ var _objectSpread2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/objectSpread2"));
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- var _extends2 = _interopRequireDefault(require("@babel/runtime/helpers/extends"));
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-
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- var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/slicedToArray"));
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+ var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/slicedToArray"));
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  var _core = require("@material-ui/core");
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@@ -35,14 +33,6 @@ var _EditableTypography = _interopRequireDefault(require("./EditableTypography")
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  var _Menu2 = _interopRequireDefault(require("./Menu"));
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- function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
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-
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- function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
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-
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- function ownKeys(object, enumerableOnly) { var keys = Object.keys(object); if (Object.getOwnPropertySymbols) { var symbols = Object.getOwnPropertySymbols(object); enumerableOnly && (symbols = symbols.filter(function (sym) { return Object.getOwnPropertyDescriptor(object, sym).enumerable; })), keys.push.apply(keys, symbols); } return keys; }
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-
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- function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
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-
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  var useStyles = (0, _core.makeStyles)(function (theme) {
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  return {
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  viewContainer: {
@@ -88,14 +78,14 @@ var ViewMenu = (0, _mobxReact.observer)(function (_ref) {
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  IconProps = _ref.IconProps;
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  var _useState = (0, _react.useState)(),
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- _useState2 = (0, _slicedToArray2.default)(_useState, 2),
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+ _useState2 = (0, _slicedToArray2["default"])(_useState, 2),
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  anchorEl = _useState2[0],
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  setAnchorEl = _useState2[1];
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  var menuItems = model.menuItems; // <=1.3.3 didn't use a function
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  var items = typeof menuItems === 'function' ? menuItems() : menuItems;
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- return items !== null && items !== void 0 && items.length ? /*#__PURE__*/_react.default.createElement(_react.default.Fragment, null, /*#__PURE__*/_react.default.createElement(_core.IconButton, (0, _extends2.default)({}, IconButtonProps, {
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+ return items !== null && items !== void 0 && items.length ? /*#__PURE__*/_react["default"].createElement(_react["default"].Fragment, null, /*#__PURE__*/_react["default"].createElement(_core.IconButton, Object.assign({}, IconButtonProps, {
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  "aria-label": "more",
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  "aria-controls": "view-menu",
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  "aria-haspopup": "true",
@@ -103,7 +93,7 @@ var ViewMenu = (0, _mobxReact.observer)(function (_ref) {
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  setAnchorEl(event.currentTarget);
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  },
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  "data-testid": "view_menu_icon"
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- }), /*#__PURE__*/_react.default.createElement(_Menu.default, IconProps)), /*#__PURE__*/_react.default.createElement(_Menu2.default, {
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+ }), /*#__PURE__*/_react["default"].createElement(_Menu["default"], IconProps)), /*#__PURE__*/_react["default"].createElement(_Menu2["default"], {
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  anchorEl: anchorEl,
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  open: Boolean(anchorEl),
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  onMenuItemClick: function onMenuItemClick(_event, callback) {
@@ -154,19 +144,19 @@ var _default = (0, _reactMeasure.withContentRect)('bounds')((0, _mobxReact.obser
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  });
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  }
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  }, []);
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- return /*#__PURE__*/_react.default.createElement(_core.Paper, {
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+ return /*#__PURE__*/_react["default"].createElement(_core.Paper, {
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  elevation: 12,
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  ref: measureRef,
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  className: classes.viewContainer,
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- style: _objectSpread(_objectSpread({}, style), {}, {
151
+ style: (0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, style), {}, {
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  padding: "0px ".concat(padWidth, "px ").concat(padWidth, "px")
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  })
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- }, /*#__PURE__*/_react.default.createElement("div", {
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+ }, /*#__PURE__*/_react["default"].createElement("div", {
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  ref: scrollRef,
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  style: {
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  display: 'flex'
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  }
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- }, /*#__PURE__*/_react.default.createElement(ViewMenu, {
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+ }, /*#__PURE__*/_react["default"].createElement(ViewMenu, {
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  model: view,
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  IconButtonProps: {
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  classes: {
@@ -177,12 +167,12 @@ var _default = (0, _reactMeasure.withContentRect)('bounds')((0, _mobxReact.obser
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  IconProps: {
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  className: classes.icon
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  }
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- }), /*#__PURE__*/_react.default.createElement("div", {
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+ }), /*#__PURE__*/_react["default"].createElement("div", {
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  className: classes.grow
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- }), /*#__PURE__*/_react.default.createElement(_core.Tooltip, {
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+ }), /*#__PURE__*/_react["default"].createElement(_core.Tooltip, {
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  title: "Rename view",
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  arrow: true
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- }, /*#__PURE__*/_react.default.createElement(_EditableTypography.default, {
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+ }, /*#__PURE__*/_react["default"].createElement(_EditableTypography["default"], {
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  value: view.displayName || ( // @ts-ignore
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  view.assemblyNames ? // @ts-ignore
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  view.assemblyNames.join(',') : 'Untitled view'),
@@ -196,18 +186,18 @@ var _default = (0, _reactMeasure.withContentRect)('bounds')((0, _mobxReact.obser
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  inputRoot: classes.inputRoot,
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  inputFocused: classes.inputFocused
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  }
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- })), /*#__PURE__*/_react.default.createElement("div", {
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+ })), /*#__PURE__*/_react["default"].createElement("div", {
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  className: classes.grow
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- }), /*#__PURE__*/_react.default.createElement(_core.IconButton, {
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+ }), /*#__PURE__*/_react["default"].createElement(_core.IconButton, {
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  "data-testid": "close_view",
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  classes: {
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  root: classes.iconRoot
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  },
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  edge: "end",
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  onClick: onClose
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- }, /*#__PURE__*/_react.default.createElement(_Close.default, {
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+ }, /*#__PURE__*/_react["default"].createElement(_Close["default"], {
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  className: classes.icon
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- }))), /*#__PURE__*/_react.default.createElement(_core.Paper, null, children));
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+ }))), /*#__PURE__*/_react["default"].createElement(_core.Paper, null, children));
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  }));
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+ exports["default"] = _default;
package/ui/index.js CHANGED
@@ -1,8 +1,8 @@
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  "use strict";
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+ var _interopRequireWildcard = require("@babel/runtime/helpers/interopRequireWildcard")["default"];
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@@ -24,31 +24,31 @@ var _exportNames = {
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  Object.defineProperty(exports, "App", {
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  enumerable: true,
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+ return _App["default"];
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  }
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  Object.defineProperty(exports, "EditableTypography", {
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+ return _EditableTypography["default"];
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  }
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  });
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  Object.defineProperty(exports, "FactoryResetDialog", {
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+ return _FactoryResetDialog["default"];
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  Object.defineProperty(exports, "FatalErrorDialog", {
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+ return _FatalErrorDialog["default"];
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  });
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  Object.defineProperty(exports, "FileSelector", {
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+ return _FileSelector["default"];
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  }
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  });
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  Object.defineProperty(exports, "LogoFull", {
@@ -66,31 +66,31 @@ Object.defineProperty(exports, "Logomark", {
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  Object.defineProperty(exports, "Menu", {
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  Object.defineProperty(exports, "PrerenderedCanvas", {
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+ return _PrerenderedCanvas["default"];
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  }
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  });
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  Object.defineProperty(exports, "ResizeHandle", {
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+ return _ResizeHandle["default"];
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  Object.defineProperty(exports, "SanitizedHTML", {
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87
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+ return _SanitizedHTML["default"];
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  });
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  Object.defineProperty(exports, "Tooltip", {
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  enumerable: true,
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93
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+ return _Tooltip["default"];
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@@ -140,8 +140,4 @@ Object.keys(_Menu).forEach(function (key) {
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143
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- function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
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+ var _SanitizedHTML = _interopRequireDefault(require("./SanitizedHTML"));
package/ui/theme.js CHANGED
@@ -1,6 +1,6 @@
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@@ -10,7 +10,7 @@ exports.createJBrowseDefaultProps = createJBrowseDefaultProps;
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  exports.jbrowseDefaultPalette = exports.jbrowseBaseTheme = void 0;
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+ var _objectSpread2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/objectSpread2"));
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  var _colors = require("@material-ui/core/colors");
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@@ -20,10 +20,6 @@ var _createPalette = require("@material-ui/core/styles/createPalette");
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22
 
23
- function ownKeys(object, enumerableOnly) { var keys = Object.keys(object); if (Object.getOwnPropertySymbols) { var symbols = Object.getOwnPropertySymbols(object); enumerableOnly && (symbols = symbols.filter(function (sym) { return Object.getOwnPropertyDescriptor(object, sym).enumerable; })), keys.push.apply(keys, symbols); } return keys; }
24
-
25
- function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
26
-
27
23
  var midnight = '#0D233F';
28
24
  var grape = '#721E63';
29
25
  var forest = '#135560';
@@ -115,7 +111,7 @@ createJBrowseDefaultProps() {
115
111
 
116
112
  function createJBrowseDefaultOverrides() {
117
113
  var palette = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : {};
118
- var generatedPalette = (0, _deepmerge.default)(jbrowseDefaultPalette, palette);
114
+ var generatedPalette = (0, _deepmerge["default"])(jbrowseDefaultPalette, palette);
119
115
  return {
120
116
  MuiIconButton: {
121
117
  colorSecondary: {
@@ -201,24 +197,24 @@ function createJBrowseTheme(theme) {
201
197
  }
202
198
 
203
199
  if ((_theme$palette = theme.palette) !== null && _theme$palette !== void 0 && _theme$palette.tertiary) {
204
- theme = _objectSpread(_objectSpread({}, theme), {}, {
205
- palette: _objectSpread(_objectSpread({}, theme.palette), {}, {
200
+ theme = (0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, theme), {}, {
201
+ palette: (0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, theme.palette), {}, {
206
202
  tertiary: refTheme.palette.augmentColor(theme.palette.tertiary)
207
203
  })
208
204
  });
209
205
  }
210
206
 
211
207
  if ((_theme$palette2 = theme.palette) !== null && _theme$palette2 !== void 0 && _theme$palette2.quaternary) {
212
- theme = _objectSpread(_objectSpread({}, theme), {}, {
213
- palette: _objectSpread(_objectSpread({}, theme.palette), {}, {
208
+ theme = (0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, theme), {}, {
209
+ palette: (0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, theme.palette), {}, {
214
210
  quaternary: refTheme.palette.augmentColor(theme.palette.quaternary)
215
211
  })
216
212
  });
217
213
  }
218
214
 
219
- theme = _objectSpread(_objectSpread({}, theme), {}, {
220
- props: (0, _deepmerge.default)(createJBrowseDefaultProps(), theme.props || {}),
221
- overrides: (0, _deepmerge.default)(createJBrowseDefaultOverrides(theme.palette), theme.overrides || {})
215
+ theme = (0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, theme), {}, {
216
+ props: (0, _deepmerge["default"])(createJBrowseDefaultProps(), theme.props || {}),
217
+ overrides: (0, _deepmerge["default"])(createJBrowseDefaultOverrides(theme.palette), theme.overrides || {})
222
218
  });
223
- return (0, _styles.createTheme)((0, _deepmerge.default)(jbrowseBaseTheme, theme));
219
+ return (0, _styles.createTheme)((0, _deepmerge["default"])(jbrowseBaseTheme, theme));
224
220
  }
@@ -1,13 +1,13 @@
1
1
  "use strict";
2
2
 
3
- var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
3
+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
4
4
 
5
5
  Object.defineProperty(exports, "__esModule", {
6
6
  value: true
7
7
  });
8
- exports.default = void 0;
8
+ exports["default"] = void 0;
9
9
 
10
- var _defineProperty2 = _interopRequireDefault(require("@babel/runtime/helpers/defineProperty"));
10
+ var _objectSpread2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/objectSpread2"));
11
11
 
12
12
  var _mobxStateTree = require("mobx-state-tree");
13
13
 
@@ -19,17 +19,13 @@ var _calculateDynamicBlocks = _interopRequireDefault(require("./calculateDynamic
19
19
 
20
20
  var _calculateStaticBlocks = _interopRequireDefault(require("./calculateStaticBlocks"));
21
21
 
22
- function ownKeys(object, enumerableOnly) { var keys = Object.keys(object); if (Object.getOwnPropertySymbols) { var symbols = Object.getOwnPropertySymbols(object); enumerableOnly && (symbols = symbols.filter(function (sym) { return Object.getOwnPropertyDescriptor(object, sym).enumerable; })), keys.push.apply(keys, symbols); } return keys; }
23
-
24
- function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
25
-
26
22
  var Base1DView = _mobxStateTree.types.model('Base1DView', {
27
23
  displayedRegions: _mobxStateTree.types.array(_mst.Region),
28
24
  bpPerPx: 0,
29
25
  offsetPx: 0,
30
26
  interRegionPaddingWidth: _mobxStateTree.types.optional(_mobxStateTree.types.number, 0),
31
27
  minimumBlockWidth: _mobxStateTree.types.optional(_mobxStateTree.types.number, 0)
32
- }).volatile(function () {
28
+ })["volatile"](function () {
33
29
  return {
34
30
  features: undefined,
35
31
  volatileWidth: 0
@@ -128,7 +124,7 @@ var Base1DView = _mobxStateTree.types.model('Base1DView', {
128
124
  if (bp < 0) {
129
125
  var region = self.displayedRegions[0];
130
126
  var offset = bp;
131
- return _objectSpread(_objectSpread({}, (0, _mobxStateTree.getSnapshot)(region)), {}, {
127
+ return (0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, (0, _mobxStateTree.getSnapshot)(region)), {}, {
132
128
  oob: true,
133
129
  coord: region.reversed ? Math.floor(region.end - offset) + 1 : Math.floor(region.start + offset) + 1,
134
130
  offset: offset,
@@ -146,7 +142,7 @@ var Base1DView = _mobxStateTree.types.model('Base1DView', {
146
142
  var _offset = bp - bpSoFar;
147
143
 
148
144
  if (len + bpSoFar > bp && bpSoFar <= bp) {
149
- return _objectSpread(_objectSpread({}, (0, _mobxStateTree.getSnapshot)(_region)), {}, {
145
+ return (0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, (0, _mobxStateTree.getSnapshot)(_region)), {}, {
150
146
  oob: false,
151
147
  offset: _offset,
152
148
  coord: _region.reversed ? Math.floor(_region.end - _offset) + 1 : Math.floor(_region.start + _offset) + 1,
@@ -170,7 +166,7 @@ var Base1DView = _mobxStateTree.types.model('Base1DView', {
170
166
 
171
167
  var _offset2 = bp - bpSoFar + _len;
172
168
 
173
- return _objectSpread(_objectSpread({}, (0, _mobxStateTree.getSnapshot)(_region2)), {}, {
169
+ return (0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, (0, _mobxStateTree.getSnapshot)(_region2)), {}, {
174
170
  oob: true,
175
171
  offset: _offset2,
176
172
  coord: _region2.reversed ? Math.floor(_region2.end - _offset2) + 1 : Math.floor(_region2.start + _offset2) + 1,
@@ -193,11 +189,11 @@ var Base1DView = _mobxStateTree.types.model('Base1DView', {
193
189
  }).views(function (self) {
194
190
  return {
195
191
  get dynamicBlocks() {
196
- return (0, _calculateDynamicBlocks.default)(self);
192
+ return (0, _calculateDynamicBlocks["default"])(self);
197
193
  },
198
194
 
199
195
  get staticBlocks() {
200
- return (0, _calculateStaticBlocks.default)(self);
196
+ return (0, _calculateStaticBlocks["default"])(self);
201
197
  },
202
198
 
203
199
  get currBp() {
@@ -326,4 +322,4 @@ var Base1DView = _mobxStateTree.types.model('Base1DView', {
326
322
  });
327
323
 
328
324
  var _default = Base1DView;
329
- exports.default = _default;
325
+ exports["default"] = _default;
@@ -1,11 +1,11 @@
1
1
  "use strict";
2
2
 
3
- var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
3
+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
4
4
 
5
5
  var _Base1DViewModel = _interopRequireDefault(require("./Base1DViewModel"));
6
6
 
7
7
  test('create Base1DView and set displayedRegions', function () {
8
- var model = _Base1DViewModel.default.create({
8
+ var model = _Base1DViewModel["default"].create({
9
9
  bpPerPx: 1,
10
10
  offsetPx: 0
11
11
  });
@@ -28,7 +28,7 @@ test('create Base1DView and set displayedRegions', function () {
28
28
  expect(model.displayedRegions).toBeTruthy();
29
29
  });
30
30
  test('Able to set bpPerPx, width and calculate widths', function () {
31
- var model = _Base1DViewModel.default.create({
31
+ var model = _Base1DViewModel["default"].create({
32
32
  bpPerPx: 0,
33
33
  offsetPx: 0
34
34
  });
@@ -56,7 +56,7 @@ test('Able to set bpPerPx, width and calculate widths', function () {
56
56
  expect(model.minimumBlockWidth).toEqual(0);
57
57
  });
58
58
  test('Able to set and showAll Regions', function () {
59
- var model = _Base1DViewModel.default.create({
59
+ var model = _Base1DViewModel["default"].create({
60
60
  bpPerPx: 0,
61
61
  offsetPx: 0
62
62
  });
@@ -85,7 +85,7 @@ test('Able to set and showAll Regions', function () {
85
85
  expect(model.bpPerPx).toEqual(53);
86
86
  });
87
87
  test('Navigate to displayedRegions', function () {
88
- var model = _Base1DViewModel.default.create({
88
+ var model = _Base1DViewModel["default"].create({
89
89
  bpPerPx: 0,
90
90
  offsetPx: 0
91
91
  });
package/util/QuickLRU.js CHANGED
@@ -1,25 +1,21 @@
1
1
  "use strict";
2
2
 
3
- var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
3
+ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault")["default"];
4
4
 
5
5
  Object.defineProperty(exports, "__esModule", {
6
6
  value: true
7
7
  });
8
- exports.default = void 0;
8
+ exports["default"] = void 0;
9
9
 
10
10
  var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
11
11
 
12
- var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/slicedToArray"));
12
+ var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/slicedToArray"));
13
13
 
14
- var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime/helpers/classCallCheck"));
14
+ var _createForOfIteratorHelper2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createForOfIteratorHelper"));
15
15
 
16
- var _createClass2 = _interopRequireDefault(require("@babel/runtime/helpers/createClass"));
16
+ var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/classCallCheck"));
17
17
 
18
- function _createForOfIteratorHelper(o, allowArrayLike) { var it = typeof Symbol !== "undefined" && o[Symbol.iterator] || o["@@iterator"]; if (!it) { if (Array.isArray(o) || (it = _unsupportedIterableToArray(o)) || allowArrayLike && o && typeof o.length === "number") { if (it) o = it; var i = 0; var F = function F() {}; return { s: F, n: function n() { if (i >= o.length) return { done: true }; return { done: false, value: o[i++] }; }, e: function e(_e) { throw _e; }, f: F }; } throw new TypeError("Invalid attempt to iterate non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method."); } var normalCompletion = true, didErr = false, err; return { s: function s() { it = it.call(o); }, n: function n() { var step = it.next(); normalCompletion = step.done; return step; }, e: function e(_e2) { didErr = true; err = _e2; }, f: function f() { try { if (!normalCompletion && it.return != null) it.return(); } finally { if (didErr) throw err; } } }; }
19
-
20
- function _unsupportedIterableToArray(o, minLen) { if (!o) return; if (typeof o === "string") return _arrayLikeToArray(o, minLen); var n = Object.prototype.toString.call(o).slice(8, -1); if (n === "Object" && o.constructor) n = o.constructor.name; if (n === "Map" || n === "Set") return Array.from(o); if (n === "Arguments" || /^(?:Ui|I)nt(?:8|16|32)(?:Clamped)?Array$/.test(n)) return _arrayLikeToArray(o, minLen); }
21
-
22
- function _arrayLikeToArray(arr, len) { if (len == null || len > arr.length) len = arr.length; for (var i = 0, arr2 = new Array(len); i < len; i++) { arr2[i] = arr[i]; } return arr2; }
18
+ var _createClass2 = _interopRequireDefault(require("@babel/runtime/helpers/esm/createClass"));
23
19
 
24
20
  /* eslint-disable no-underscore-dangle */
25
21
 
@@ -31,7 +27,7 @@ function _arrayLikeToArray(arr, len) { if (len == null || len > arr.length) len
31
27
  var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
32
28
  function QuickLRU() {
33
29
  var options = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : {};
34
- (0, _classCallCheck2.default)(this, QuickLRU);
30
+ (0, _classCallCheck2["default"])(this, QuickLRU);
35
31
 
36
32
  if (!(options.maxSize && options.maxSize > 0)) {
37
33
  throw new TypeError('`maxSize` must be a number greater than 0');
@@ -43,7 +39,7 @@ var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
43
39
  this._size = 0;
44
40
  }
45
41
 
46
- (0, _createClass2.default)(QuickLRU, [{
42
+ (0, _createClass2["default"])(QuickLRU, [{
47
43
  key: "_set",
48
44
  value: function _set(key, value) {
49
45
  this.cache.set(key, value);
@@ -64,7 +60,7 @@ var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
64
60
 
65
61
  if (this.oldCache.has(key)) {
66
62
  var value = this.oldCache.get(key);
67
- this.oldCache.delete(key);
63
+ this.oldCache["delete"](key);
68
64
 
69
65
  this._set(key, value);
70
66
 
@@ -105,13 +101,13 @@ var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
105
101
  }, {
106
102
  key: "delete",
107
103
  value: function _delete(key) {
108
- var deleted = this.cache.delete(key);
104
+ var deleted = this.cache["delete"](key);
109
105
 
110
106
  if (deleted) {
111
107
  this._size -= 1;
112
108
  }
113
109
 
114
- return this.oldCache.delete(key) || deleted;
110
+ return this.oldCache["delete"](key) || deleted;
115
111
  }
116
112
  }, {
117
113
  key: "clear",
@@ -122,14 +118,14 @@ var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
122
118
  }
123
119
  }, {
124
120
  key: "keys",
125
- value: /*#__PURE__*/_regenerator.default.mark(function keys() {
121
+ value: /*#__PURE__*/_regenerator["default"].mark(function keys() {
126
122
  var _iterator, _step, _step$value, key;
127
123
 
128
- return _regenerator.default.wrap(function keys$(_context) {
124
+ return _regenerator["default"].wrap(function keys$(_context) {
129
125
  while (1) {
130
126
  switch (_context.prev = _context.next) {
131
127
  case 0:
132
- _iterator = _createForOfIteratorHelper(this);
128
+ _iterator = (0, _createForOfIteratorHelper2["default"])(this);
133
129
  _context.prev = 1;
134
130
 
135
131
  _iterator.s();
@@ -140,7 +136,7 @@ var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
140
136
  break;
141
137
  }
142
138
 
143
- _step$value = (0, _slicedToArray2.default)(_step.value, 1), key = _step$value[0];
139
+ _step$value = (0, _slicedToArray2["default"])(_step.value, 1), key = _step$value[0];
144
140
  _context.next = 7;
145
141
  return key;
146
142
 
@@ -174,14 +170,14 @@ var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
174
170
  })
175
171
  }, {
176
172
  key: "values",
177
- value: /*#__PURE__*/_regenerator.default.mark(function values() {
173
+ value: /*#__PURE__*/_regenerator["default"].mark(function values() {
178
174
  var _iterator2, _step2, _step2$value, value;
179
175
 
180
- return _regenerator.default.wrap(function values$(_context2) {
176
+ return _regenerator["default"].wrap(function values$(_context2) {
181
177
  while (1) {
182
178
  switch (_context2.prev = _context2.next) {
183
179
  case 0:
184
- _iterator2 = _createForOfIteratorHelper(this);
180
+ _iterator2 = (0, _createForOfIteratorHelper2["default"])(this);
185
181
  _context2.prev = 1;
186
182
 
187
183
  _iterator2.s();
@@ -192,7 +188,7 @@ var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
192
188
  break;
193
189
  }
194
190
 
195
- _step2$value = (0, _slicedToArray2.default)(_step2.value, 2), value = _step2$value[1];
191
+ _step2$value = (0, _slicedToArray2["default"])(_step2.value, 2), value = _step2$value[1];
196
192
  _context2.next = 7;
197
193
  return value;
198
194
 
@@ -226,14 +222,14 @@ var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
226
222
  })
227
223
  }, {
228
224
  key: _Symbol$iterator,
229
- value: /*#__PURE__*/_regenerator.default.mark(function value() {
225
+ value: /*#__PURE__*/_regenerator["default"].mark(function value() {
230
226
  var _iterator3, _step3, item, _iterator4, _step4, _item, _item2, key;
231
227
 
232
- return _regenerator.default.wrap(function value$(_context3) {
228
+ return _regenerator["default"].wrap(function value$(_context3) {
233
229
  while (1) {
234
230
  switch (_context3.prev = _context3.next) {
235
231
  case 0:
236
- _iterator3 = _createForOfIteratorHelper(this.cache);
232
+ _iterator3 = (0, _createForOfIteratorHelper2["default"])(this.cache);
237
233
  _context3.prev = 1;
238
234
 
239
235
  _iterator3.s();
@@ -270,7 +266,7 @@ var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
270
266
  return _context3.finish(14);
271
267
 
272
268
  case 17:
273
- _iterator4 = _createForOfIteratorHelper(this.oldCache);
269
+ _iterator4 = (0, _createForOfIteratorHelper2["default"])(this.oldCache);
274
270
  _context3.prev = 18;
275
271
 
276
272
  _iterator4.s();
@@ -282,7 +278,7 @@ var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
282
278
  }
283
279
 
284
280
  _item = _step4.value;
285
- _item2 = (0, _slicedToArray2.default)(_item, 1), key = _item2[0];
281
+ _item2 = (0, _slicedToArray2["default"])(_item, 1), key = _item2[0];
286
282
 
287
283
  if (this.cache.has(key)) {
288
284
  _context3.next = 26;
@@ -325,7 +321,7 @@ var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
325
321
  get: function get() {
326
322
  var oldCacheSize = 0;
327
323
 
328
- var _iterator5 = _createForOfIteratorHelper(this.oldCache.keys()),
324
+ var _iterator5 = (0, _createForOfIteratorHelper2["default"])(this.oldCache.keys()),
329
325
  _step5;
330
326
 
331
327
  try {
@@ -349,4 +345,4 @@ var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
349
345
  }(Symbol.iterator);
350
346
 
351
347
  var _default = QuickLRU;
352
- exports.default = _default;
348
+ exports["default"] = _default;