@inflexa-ai/harness 0.1.1

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Files changed (823) hide show
  1. package/LICENSE +202 -0
  2. package/NOTICE +5 -0
  3. package/README.md +58 -0
  4. package/dist/agents/conversation-agent.d.ts +105 -0
  5. package/dist/agents/conversation-agent.js +140 -0
  6. package/dist/agents/report-builder.d.ts +32 -0
  7. package/dist/agents/report-builder.js +31 -0
  8. package/dist/agents/sandbox/__fixtures__/deps.d.ts +23 -0
  9. package/dist/agents/sandbox/__fixtures__/deps.js +96 -0
  10. package/dist/agents/sandbox/bulk-transcriptomics-agent.d.ts +8 -0
  11. package/dist/agents/sandbox/bulk-transcriptomics-agent.js +22 -0
  12. package/dist/agents/sandbox/cheminformatics-agent.d.ts +9 -0
  13. package/dist/agents/sandbox/cheminformatics-agent.js +62 -0
  14. package/dist/agents/sandbox/chromatin-agent.d.ts +8 -0
  15. package/dist/agents/sandbox/chromatin-agent.js +24 -0
  16. package/dist/agents/sandbox/data-profiler.d.ts +10 -0
  17. package/dist/agents/sandbox/data-profiler.js +24 -0
  18. package/dist/agents/sandbox/dna-methylation-agent.d.ts +8 -0
  19. package/dist/agents/sandbox/dna-methylation-agent.js +24 -0
  20. package/dist/agents/sandbox/drug-repurposing-agent.d.ts +8 -0
  21. package/dist/agents/sandbox/drug-repurposing-agent.js +54 -0
  22. package/dist/agents/sandbox/enrichment-agent.d.ts +8 -0
  23. package/dist/agents/sandbox/enrichment-agent.js +24 -0
  24. package/dist/agents/sandbox/ephemeral-executor.d.ts +9 -0
  25. package/dist/agents/sandbox/ephemeral-executor.js +29 -0
  26. package/dist/agents/sandbox/genomic-variant-agent.d.ts +8 -0
  27. package/dist/agents/sandbox/genomic-variant-agent.js +27 -0
  28. package/dist/agents/sandbox/immune-profiling-agent.d.ts +8 -0
  29. package/dist/agents/sandbox/immune-profiling-agent.js +43 -0
  30. package/dist/agents/sandbox/index.d.ts +31 -0
  31. package/dist/agents/sandbox/index.js +96 -0
  32. package/dist/agents/sandbox/metabolomics-agent.d.ts +8 -0
  33. package/dist/agents/sandbox/metabolomics-agent.js +15 -0
  34. package/dist/agents/sandbox/microbiome-agent.d.ts +8 -0
  35. package/dist/agents/sandbox/microbiome-agent.js +15 -0
  36. package/dist/agents/sandbox/multi-omics-integration-agent.d.ts +8 -0
  37. package/dist/agents/sandbox/multi-omics-integration-agent.js +33 -0
  38. package/dist/agents/sandbox/multimodal-sc-agent.d.ts +8 -0
  39. package/dist/agents/sandbox/multimodal-sc-agent.js +15 -0
  40. package/dist/agents/sandbox/network-agent.d.ts +8 -0
  41. package/dist/agents/sandbox/network-agent.js +25 -0
  42. package/dist/agents/sandbox/pkpd-clinical-response-agent.d.ts +8 -0
  43. package/dist/agents/sandbox/pkpd-clinical-response-agent.js +59 -0
  44. package/dist/agents/sandbox/proteomics-agent.d.ts +8 -0
  45. package/dist/agents/sandbox/proteomics-agent.js +15 -0
  46. package/dist/agents/sandbox/scientific-executor.d.ts +9 -0
  47. package/dist/agents/sandbox/scientific-executor.js +56 -0
  48. package/dist/agents/sandbox/shared.d.ts +100 -0
  49. package/dist/agents/sandbox/shared.js +195 -0
  50. package/dist/agents/sandbox/single-cell-agent.d.ts +8 -0
  51. package/dist/agents/sandbox/single-cell-agent.js +25 -0
  52. package/dist/agents/sandbox/spatial-omics-agent.d.ts +8 -0
  53. package/dist/agents/sandbox/spatial-omics-agent.js +15 -0
  54. package/dist/agents/sandbox/statistical-modeling-agent.d.ts +8 -0
  55. package/dist/agents/sandbox/statistical-modeling-agent.js +37 -0
  56. package/dist/agents/sandbox/translational-safety-agent.d.ts +8 -0
  57. package/dist/agents/sandbox/translational-safety-agent.js +59 -0
  58. package/dist/agents/sandbox/types.d.ts +34 -0
  59. package/dist/agents/sandbox/types.js +15 -0
  60. package/dist/agents/sandbox/validate-skills.d.ts +18 -0
  61. package/dist/agents/sandbox/validate-skills.js +40 -0
  62. package/dist/agents/sandbox-catalog.d.ts +33 -0
  63. package/dist/agents/sandbox-catalog.js +44 -0
  64. package/dist/agents/system-prompt.d.ts +25 -0
  65. package/dist/agents/system-prompt.js +23 -0
  66. package/dist/app/chat-turn.d.ts +35 -0
  67. package/dist/app/chat-turn.js +64 -0
  68. package/dist/app/data-profile-policy.d.ts +36 -0
  69. package/dist/app/data-profile-policy.js +37 -0
  70. package/dist/app/message-assembly.d.ts +65 -0
  71. package/dist/app/message-assembly.js +61 -0
  72. package/dist/app/synthesize-run.d.ts +57 -0
  73. package/dist/app/synthesize-run.js +103 -0
  74. package/dist/auth/local-auth-context.d.ts +19 -0
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  76. package/dist/auth/local-run-authorizer.d.ts +10 -0
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  78. package/dist/auth/types.d.ts +166 -0
  79. package/dist/auth/types.js +61 -0
  80. package/dist/billing/cached-resolver.d.ts +23 -0
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  82. package/dist/billing/noop-resolver.d.ts +6 -0
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  88. package/dist/billing/run-charge.d.ts +24 -0
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  90. package/dist/config/resource-limits.d.ts +76 -0
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  92. package/dist/contracts/analogy-report.d.ts +120 -0
  93. package/dist/contracts/analogy-report.js +50 -0
  94. package/dist/contracts/chat-events.d.ts +61 -0
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  100. package/dist/contracts/index.d.ts +12 -0
  101. package/dist/contracts/index.js +5 -0
  102. package/dist/contracts/message.d.ts +36 -0
  103. package/dist/contracts/message.js +9 -0
  104. package/dist/contracts/part-registry.d.ts +18 -0
  105. package/dist/contracts/part-registry.js +28 -0
  106. package/dist/contracts/schemas/chat-events.d.ts +90 -0
  107. package/dist/contracts/schemas/chat-events.js +43 -0
  108. package/dist/contracts/schemas/chat-parts.d.ts +683 -0
  109. package/dist/contracts/schemas/chat-parts.js +295 -0
  110. package/dist/contracts/schemas/index.d.ts +2 -0
  111. package/dist/contracts/schemas/index.js +2 -0
  112. package/dist/contracts/target-assessment-row.d.ts +85 -0
  113. package/dist/contracts/target-assessment-row.js +37 -0
  114. package/dist/contracts/target-dossier.d.ts +16720 -0
  115. package/dist/contracts/target-dossier.js +1339 -0
  116. package/dist/data/clinical-benchmarks.json +108 -0
  117. package/dist/data/protein-family-modality.json +101 -0
  118. package/dist/data/safety-panel-schema.d.ts +64 -0
  119. package/dist/data/safety-panel-schema.js +34 -0
  120. package/dist/data/safety-panel.json +436 -0
  121. package/dist/execution/artifact-metadata.d.ts +74 -0
  122. package/dist/execution/artifact-metadata.js +203 -0
  123. package/dist/execution/artifact-record.d.ts +19 -0
  124. package/dist/execution/artifact-record.js +7 -0
  125. package/dist/execution/artifact-registration.d.ts +36 -0
  126. package/dist/execution/artifact-registration.js +61 -0
  127. package/dist/execution/artifact-registry.d.ts +82 -0
  128. package/dist/execution/artifact-registry.js +17 -0
  129. package/dist/execution/dbos-run-launcher.d.ts +7 -0
  130. package/dist/execution/dbos-run-launcher.js +38 -0
  131. package/dist/execution/ephemeral-runner.d.ts +81 -0
  132. package/dist/execution/ephemeral-runner.js +161 -0
  133. package/dist/execution/filesystem-artifact-registry.d.ts +57 -0
  134. package/dist/execution/filesystem-artifact-registry.js +92 -0
  135. package/dist/execution/noop-artifact-registry.d.ts +11 -0
  136. package/dist/execution/noop-artifact-registry.js +17 -0
  137. package/dist/execution/post-step-pipeline.d.ts +70 -0
  138. package/dist/execution/post-step-pipeline.js +207 -0
  139. package/dist/execution/post-step.d.ts +20 -0
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  141. package/dist/execution/reconcile-manifest.d.ts +25 -0
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  143. package/dist/execution/report-render.d.ts +39 -0
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  145. package/dist/execution/report-runner.d.ts +87 -0
  146. package/dist/execution/report-runner.js +227 -0
  147. package/dist/execution/run-authorizer.d.ts +43 -0
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  149. package/dist/execution/run-launcher.d.ts +36 -0
  150. package/dist/execution/run-launcher.js +15 -0
  151. package/dist/execution/run-synthesis.d.ts +107 -0
  152. package/dist/execution/run-synthesis.js +329 -0
  153. package/dist/execution/staged-input.d.ts +41 -0
  154. package/dist/execution/staged-input.js +15 -0
  155. package/dist/execution/step-summary-metrics.d.ts +10 -0
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  157. package/dist/execution/step-summary.d.ts +55 -0
  158. package/dist/execution/step-summary.js +106 -0
  159. package/dist/execution/topo-sort.d.ts +33 -0
  160. package/dist/execution/topo-sort.js +99 -0
  161. package/dist/index.d.ts +112 -0
  162. package/dist/index.js +157 -0
  163. package/dist/input-sanitization.d.ts +22 -0
  164. package/dist/input-sanitization.js +64 -0
  165. package/dist/lib/async-utils.d.ts +10 -0
  166. package/dist/lib/async-utils.js +24 -0
  167. package/dist/lib/chrome.d.ts +15 -0
  168. package/dist/lib/chrome.js +95 -0
  169. package/dist/lib/db-result.d.ts +93 -0
  170. package/dist/lib/db-result.js +197 -0
  171. package/dist/lib/fs-helpers.d.ts +74 -0
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  173. package/dist/lib/fs-result.d.ts +98 -0
  174. package/dist/lib/fs-result.js +137 -0
  175. package/dist/lib/host-concurrency.d.ts +16 -0
  176. package/dist/lib/host-concurrency.js +60 -0
  177. package/dist/lib/identifiers.d.ts +8 -0
  178. package/dist/lib/identifiers.js +10 -0
  179. package/dist/lib/metrics.d.ts +7 -0
  180. package/dist/lib/metrics.js +12 -0
  181. package/dist/lib/mime-detect.d.ts +17 -0
  182. package/dist/lib/mime-detect.js +29 -0
  183. package/dist/lib/otel.d.ts +30 -0
  184. package/dist/lib/otel.js +102 -0
  185. package/dist/lib/regulatory-corpus/fetch-fda-guidance.d.ts +35 -0
  186. package/dist/lib/regulatory-corpus/fetch-fda-guidance.js +107 -0
  187. package/dist/lib/regulatory-corpus/fetch-ich.d.ts +46 -0
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  189. package/dist/lib/regulatory-corpus.d.ts +88 -0
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  191. package/dist/lib/result.d.ts +87 -0
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  193. package/dist/lib/storage.d.ts +29 -0
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  197. package/dist/lib/trace-context.d.ts +11 -0
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  199. package/dist/loop/__fixtures__/scripted-provider.d.ts +31 -0
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  201. package/dist/loop/budget-exceeded.d.ts +22 -0
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  203. package/dist/loop/metrics.d.ts +25 -0
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  205. package/dist/loop/run-agent.d.ts +28 -0
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  211. package/dist/loop/types.d.ts +95 -0
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  213. package/dist/memory/ai-sdk-message-storage.d.ts +20 -0
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  235. package/dist/prompts/analogical-reasoner.d.ts +1 -0
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  237. package/dist/prompts/conversation.d.ts +1 -0
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  239. package/dist/prompts/execute-analysis/step-summary.d.ts +1 -0
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  249. package/dist/prompts/sandbox/cheminformatics-agent.d.ts +1 -0
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  255. package/dist/prompts/sandbox/dna-methylation-agent.d.ts +1 -0
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  257. package/dist/prompts/sandbox/drug-repurposing-agent.d.ts +1 -0
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  259. package/dist/prompts/sandbox/enrichment-agent.d.ts +1 -0
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  263. package/dist/prompts/sandbox/genomic-variant-agent.d.ts +1 -0
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  265. package/dist/prompts/sandbox/immune-profiling-agent.d.ts +1 -0
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  267. package/dist/prompts/sandbox/metabolomics-agent.d.ts +1 -0
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  277. package/dist/prompts/sandbox/pkpd-clinical-response-agent.d.ts +1 -0
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@@ -0,0 +1,696 @@
1
+ /**
2
+ * Phase 2 aggregator — schema definitions retained for downstream
3
+ * type-checking. The DBOS workflow assembles the Phase-2 bundle inline.
4
+ *
5
+ * The `failedTrialClassifier` and `offTargetCurator` keys present in
6
+ * earlier versions were removed as part of the
7
+ * `target-dossier-deep-synthesis` change — those steps were no-ops; their
8
+ * deterministic logic runs in Phase 4 (`classifyFailureReason`,
9
+ * `aggregateOffTargetPanel`). The bundle continues to expose them as
10
+ * coverage-tagged stubs so downstream code that still reads them
11
+ * compiles, but nothing populates them.
12
+ */
13
+ import { z } from "zod";
14
+ export declare const Phase2AggregateInputSchema: z.ZodObject<{
15
+ "decision-modulator-triage": z.ZodDiscriminatedUnion<[z.ZodObject<{
16
+ coverage: z.ZodLiteral<"available">;
17
+ data: z.ZodObject<{
18
+ shortlist: z.ZodArray<z.ZodObject<{
19
+ moleculeChemblId: z.ZodString;
20
+ preferredName: z.ZodString;
21
+ maxPhase: z.ZodNullable<z.ZodNumber>;
22
+ firstApproval: z.ZodNullable<z.ZodNumber>;
23
+ rationale: z.ZodString;
24
+ }, z.core.$strip>>;
25
+ notes: z.ZodString;
26
+ dropped_synonyms: z.ZodDefault<z.ZodArray<z.ZodObject<{
27
+ chemblId: z.ZodString;
28
+ reason: z.ZodEnum<{
29
+ same_active_substance: "same_active_substance";
30
+ ambiguous_name_synonym: "ambiguous_name_synonym";
31
+ }>;
32
+ keptId: z.ZodNullable<z.ZodString>;
33
+ }, z.core.$strip>>>;
34
+ }, z.core.$strip>;
35
+ }, z.core.$strip>, z.ZodObject<{
36
+ coverage: z.ZodLiteral<"queried_no_data">;
37
+ error: z.ZodOptional<z.ZodObject<{
38
+ message: z.ZodString;
39
+ name: z.ZodOptional<z.ZodString>;
40
+ stack: z.ZodOptional<z.ZodString>;
41
+ }, z.core.$strip>>;
42
+ }, z.core.$strip>, z.ZodObject<{
43
+ coverage: z.ZodLiteral<"not_loaded">;
44
+ reason: z.ZodOptional<z.ZodString>;
45
+ }, z.core.$strip>], "coverage">;
46
+ "decision-drugs-in-class": z.ZodDiscriminatedUnion<[z.ZodObject<{
47
+ coverage: z.ZodLiteral<"available">;
48
+ data: z.ZodObject<{
49
+ drugs: z.ZodArray<z.ZodObject<{
50
+ moleculeChemblId: z.ZodString;
51
+ preferredName: z.ZodString;
52
+ maxPhase: z.ZodNullable<z.ZodNumber>;
53
+ firstApproval: z.ZodNullable<z.ZodNumber>;
54
+ moleculeType: z.ZodNullable<z.ZodString>;
55
+ sources: z.ZodArray<z.ZodEnum<{
56
+ chembl: "chembl";
57
+ dgidb: "dgidb";
58
+ drugbank: "drugbank";
59
+ }>>;
60
+ }, z.core.$strip>>;
61
+ total: z.ZodNumber;
62
+ truncated: z.ZodBoolean;
63
+ }, z.core.$strip>;
64
+ }, z.core.$strip>, z.ZodObject<{
65
+ coverage: z.ZodLiteral<"queried_no_data">;
66
+ error: z.ZodOptional<z.ZodObject<{
67
+ message: z.ZodString;
68
+ name: z.ZodOptional<z.ZodString>;
69
+ stack: z.ZodOptional<z.ZodString>;
70
+ }, z.core.$strip>>;
71
+ }, z.core.$strip>, z.ZodObject<{
72
+ coverage: z.ZodLiteral<"not_loaded">;
73
+ reason: z.ZodOptional<z.ZodString>;
74
+ }, z.core.$strip>], "coverage">;
75
+ }, z.core.$strip>;
76
+ export declare const Phase2BundleSchema: z.ZodObject<{
77
+ phase1: z.ZodObject<{
78
+ resolved: z.ZodObject<{
79
+ assessmentId: z.ZodString;
80
+ goal: z.ZodNullable<z.ZodString>;
81
+ canonicalId: z.ZodString;
82
+ canonicalOntology: z.ZodEnum<{
83
+ ensembl: "ensembl";
84
+ hgnc: "hgnc";
85
+ }>;
86
+ geneSymbol: z.ZodString;
87
+ approvedName: z.ZodString;
88
+ ids: z.ZodObject<{
89
+ hgnc: z.ZodNullable<z.ZodString>;
90
+ ensembl: z.ZodNullable<z.ZodString>;
91
+ uniprot: z.ZodNullable<z.ZodString>;
92
+ chembl: z.ZodNullable<z.ZodString>;
93
+ entrez: z.ZodNullable<z.ZodString>;
94
+ }, z.core.$strip>;
95
+ synonyms: z.ZodArray<z.ZodString>;
96
+ proteinSynonyms: z.ZodArray<z.ZodString>;
97
+ proteinFamily: z.ZodNullable<z.ZodString>;
98
+ resolutionCoverage: z.ZodObject<{
99
+ hgnc: z.ZodBoolean;
100
+ uniprot: z.ZodBoolean;
101
+ ensembl: z.ZodBoolean;
102
+ chembl: z.ZodBoolean;
103
+ }, z.core.$strip>;
104
+ }, z.core.$strip>;
105
+ collectors: z.ZodObject<{
106
+ opentargets: z.ZodDiscriminatedUnion<[z.ZodObject<{
107
+ coverage: z.ZodLiteral<"available">;
108
+ data: z.ZodObject<{
109
+ ensemblId: z.ZodString;
110
+ approvedSymbol: z.ZodString;
111
+ approvedName: z.ZodString;
112
+ tractability: z.ZodNullable<z.ZodObject<{
113
+ smallMolecule: z.ZodNullable<z.ZodBoolean>;
114
+ antibody: z.ZodNullable<z.ZodBoolean>;
115
+ otherModalities: z.ZodNullable<z.ZodBoolean>;
116
+ }, z.core.$strip>>;
117
+ associations: z.ZodArray<z.ZodObject<{
118
+ diseaseId: z.ZodString;
119
+ diseaseName: z.ZodString;
120
+ score: z.ZodNumber;
121
+ geneticAssociationScore: z.ZodNullable<z.ZodNumber>;
122
+ knownDrugScore: z.ZodNullable<z.ZodNumber>;
123
+ literatureScore: z.ZodNullable<z.ZodNumber>;
124
+ animalModelScore: z.ZodDefault<z.ZodNullable<z.ZodNumber>>;
125
+ somaticMutationScore: z.ZodDefault<z.ZodNullable<z.ZodNumber>>;
126
+ literaturePmids: z.ZodDefault<z.ZodArray<z.ZodString>>;
127
+ }, z.core.$strip>>;
128
+ safetyLiabilities: z.ZodArray<z.ZodObject<{
129
+ event: z.ZodString;
130
+ biosamples: z.ZodArray<z.ZodString>;
131
+ effects: z.ZodNullable<z.ZodString>;
132
+ source: z.ZodString;
133
+ }, z.core.$strip>>;
134
+ baselineExpression: z.ZodArray<z.ZodObject<{
135
+ tissueId: z.ZodString;
136
+ tissueLabel: z.ZodString;
137
+ organSystem: z.ZodNullable<z.ZodString>;
138
+ rna: z.ZodNullable<z.ZodObject<{
139
+ value: z.ZodNumber;
140
+ unit: z.ZodString;
141
+ }, z.core.$strip>>;
142
+ protein: z.ZodNullable<z.ZodObject<{
143
+ level: z.ZodNullable<z.ZodNumber>;
144
+ }, z.core.$strip>>;
145
+ }, z.core.$strip>>;
146
+ }, z.core.$strip>;
147
+ }, z.core.$strip>, z.ZodObject<{
148
+ coverage: z.ZodLiteral<"queried_no_data">;
149
+ error: z.ZodOptional<z.ZodObject<{
150
+ message: z.ZodString;
151
+ name: z.ZodOptional<z.ZodString>;
152
+ stack: z.ZodOptional<z.ZodString>;
153
+ }, z.core.$strip>>;
154
+ }, z.core.$strip>, z.ZodObject<{
155
+ coverage: z.ZodLiteral<"not_loaded">;
156
+ reason: z.ZodOptional<z.ZodString>;
157
+ }, z.core.$strip>], "coverage">;
158
+ chemblModulators: z.ZodDiscriminatedUnion<[z.ZodObject<{
159
+ coverage: z.ZodLiteral<"available">;
160
+ data: z.ZodObject<{
161
+ targetChemblId: z.ZodNullable<z.ZodString>;
162
+ modulators: z.ZodArray<z.ZodObject<{
163
+ moleculeChemblId: z.ZodString;
164
+ parentChemblId: z.ZodNullable<z.ZodString>;
165
+ preferredName: z.ZodNullable<z.ZodString>;
166
+ maxPhase: z.ZodNullable<z.ZodNumber>;
167
+ moleculeType: z.ZodNullable<z.ZodString>;
168
+ firstApproval: z.ZodNullable<z.ZodNumber>;
169
+ evidence_source: z.ZodOptional<z.ZodLiteral<"chembl_activity">>;
170
+ }, z.core.$strip>>;
171
+ }, z.core.$strip>;
172
+ }, z.core.$strip>, z.ZodObject<{
173
+ coverage: z.ZodLiteral<"queried_no_data">;
174
+ error: z.ZodOptional<z.ZodObject<{
175
+ message: z.ZodString;
176
+ name: z.ZodOptional<z.ZodString>;
177
+ stack: z.ZodOptional<z.ZodString>;
178
+ }, z.core.$strip>>;
179
+ }, z.core.$strip>, z.ZodObject<{
180
+ coverage: z.ZodLiteral<"not_loaded">;
181
+ reason: z.ZodOptional<z.ZodString>;
182
+ }, z.core.$strip>], "coverage">;
183
+ ctgov: z.ZodDiscriminatedUnion<[z.ZodObject<{
184
+ coverage: z.ZodLiteral<"available">;
185
+ data: z.ZodObject<{
186
+ active: z.ZodArray<z.ZodObject<{
187
+ nctId: z.ZodString;
188
+ title: z.ZodString;
189
+ officialTitle: z.ZodNullable<z.ZodString>;
190
+ status: z.ZodString;
191
+ phase: z.ZodNullable<z.ZodString>;
192
+ studyType: z.ZodNullable<z.ZodString>;
193
+ primaryPurpose: z.ZodNullable<z.ZodString>;
194
+ conditions: z.ZodArray<z.ZodString>;
195
+ interventions: z.ZodArray<z.ZodString>;
196
+ interventionDetails: z.ZodArray<z.ZodObject<{
197
+ name: z.ZodString;
198
+ type: z.ZodNullable<z.ZodString>;
199
+ description: z.ZodNullable<z.ZodString>;
200
+ otherNames: z.ZodArray<z.ZodString>;
201
+ }, z.core.$strip>>;
202
+ enrollmentCount: z.ZodNullable<z.ZodNumber>;
203
+ startDate: z.ZodNullable<z.ZodString>;
204
+ primaryCompletionDate: z.ZodNullable<z.ZodString>;
205
+ whyStopped: z.ZodNullable<z.ZodString>;
206
+ briefSummary: z.ZodNullable<z.ZodString>;
207
+ detailedDescription: z.ZodNullable<z.ZodString>;
208
+ sponsor: z.ZodNullable<z.ZodString>;
209
+ collection_query: z.ZodOptional<z.ZodString>;
210
+ collection_channel: z.ZodOptional<z.ZodEnum<{
211
+ class_modulator: "class_modulator";
212
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213
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214
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215
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216
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217
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218
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220
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223
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224
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225
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226
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230
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232
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233
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235
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236
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237
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241
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242
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244
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245
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246
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247
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248
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249
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250
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273
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274
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275
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296
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297
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298
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299
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300
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301
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302
+ ntpm: "ntpm";
303
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304
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305
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306
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311
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324
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326
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328
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329
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330
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331
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332
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333
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334
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335
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336
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+ tissue: z.ZodString;
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+ rank: z.ZodEnum<{
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340
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341
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342
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343
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346
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348
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360
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364
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365
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366
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367
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368
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369
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373
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385
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389
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391
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397
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413
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414
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415
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416
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417
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418
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419
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421
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422
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424
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425
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427
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429
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430
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431
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432
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433
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434
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435
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436
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438
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441
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447
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451
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453
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454
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455
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456
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457
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458
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459
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460
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465
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476
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477
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478
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479
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480
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481
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482
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483
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485
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486
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487
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488
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495
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504
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507
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509
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510
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511
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516
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522
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526
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527
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528
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530
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531
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532
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534
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535
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539
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540
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542
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545
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546
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547
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551
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552
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553
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554
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555
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556
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557
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558
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559
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560
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562
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563
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564
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565
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566
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567
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568
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569
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570
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571
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572
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573
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574
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575
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576
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577
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578
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579
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580
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581
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582
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584
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585
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587
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589
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590
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592
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595
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596
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597
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600
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601
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602
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603
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604
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605
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606
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607
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608
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609
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610
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612
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613
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614
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615
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616
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617
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618
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619
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621
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623
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624
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626
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628
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629
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630
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631
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632
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633
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634
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635
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637
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639
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640
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642
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644
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646
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647
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650
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651
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653
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654
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656
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658
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660
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661
+ }, z.core.$strip>, z.ZodObject<{
662
+ coverage: z.ZodLiteral<"not_loaded">;
663
+ reason: z.ZodOptional<z.ZodString>;
664
+ }, z.core.$strip>], "coverage">;
665
+ drugsInClass: z.ZodDiscriminatedUnion<[z.ZodObject<{
666
+ coverage: z.ZodLiteral<"available">;
667
+ data: z.ZodObject<{
668
+ drugs: z.ZodArray<z.ZodObject<{
669
+ moleculeChemblId: z.ZodString;
670
+ preferredName: z.ZodString;
671
+ maxPhase: z.ZodNullable<z.ZodNumber>;
672
+ firstApproval: z.ZodNullable<z.ZodNumber>;
673
+ moleculeType: z.ZodNullable<z.ZodString>;
674
+ sources: z.ZodArray<z.ZodEnum<{
675
+ chembl: "chembl";
676
+ dgidb: "dgidb";
677
+ drugbank: "drugbank";
678
+ }>>;
679
+ }, z.core.$strip>>;
680
+ total: z.ZodNumber;
681
+ truncated: z.ZodBoolean;
682
+ }, z.core.$strip>;
683
+ }, z.core.$strip>, z.ZodObject<{
684
+ coverage: z.ZodLiteral<"queried_no_data">;
685
+ error: z.ZodOptional<z.ZodObject<{
686
+ message: z.ZodString;
687
+ name: z.ZodOptional<z.ZodString>;
688
+ stack: z.ZodOptional<z.ZodString>;
689
+ }, z.core.$strip>>;
690
+ }, z.core.$strip>, z.ZodObject<{
691
+ coverage: z.ZodLiteral<"not_loaded">;
692
+ reason: z.ZodOptional<z.ZodString>;
693
+ }, z.core.$strip>], "coverage">;
694
+ }, z.core.$strip>;
695
+ }, z.core.$strip>;
696
+ export type Phase2Bundle = z.infer<typeof Phase2BundleSchema>;