@heyai-rules/pilo-masterkit 1.2.2 → 3.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (594) hide show
  1. package/.agent/agents/architect.md +211 -211
  2. package/.agent/agents/build-error-resolver.md +114 -114
  3. package/.agent/agents/chief-of-staff.md +151 -151
  4. package/.agent/agents/code-reviewer.md +237 -237
  5. package/.agent/agents/cpp-build-resolver.md +90 -90
  6. package/.agent/agents/cpp-reviewer.md +72 -72
  7. package/.agent/agents/csharp-reviewer.md +101 -0
  8. package/.agent/agents/dart-build-resolver.md +201 -0
  9. package/.agent/agents/database-reviewer.md +91 -91
  10. package/.agent/agents/doc-updater.md +107 -107
  11. package/.agent/agents/docs-lookup.md +68 -68
  12. package/.agent/agents/e2e-runner.md +107 -107
  13. package/.agent/agents/flutter-reviewer.md +243 -243
  14. package/.agent/agents/gan-evaluator.md +209 -0
  15. package/.agent/agents/gan-generator.md +131 -0
  16. package/.agent/agents/gan-planner.md +99 -0
  17. package/.agent/agents/go-build-resolver.md +94 -94
  18. package/.agent/agents/go-reviewer.md +76 -76
  19. package/.agent/agents/harness-optimizer.md +35 -35
  20. package/.agent/agents/healthcare-reviewer.md +83 -0
  21. package/.agent/agents/java-build-resolver.md +153 -153
  22. package/.agent/agents/java-reviewer.md +92 -92
  23. package/.agent/agents/kotlin-build-resolver.md +118 -118
  24. package/.agent/agents/kotlin-reviewer.md +159 -159
  25. package/.agent/agents/loop-operator.md +36 -36
  26. package/.agent/agents/opensource-forker.md +198 -0
  27. package/.agent/agents/opensource-packager.md +249 -0
  28. package/.agent/agents/opensource-sanitizer.md +188 -0
  29. package/.agent/agents/performance-optimizer.md +392 -133
  30. package/.agent/agents/personas/athena-agent/agent.json +10 -0
  31. package/.agent/agents/personas/athena-agent/athena-backend-logic-architecture-profile.md +189 -0
  32. package/.agent/agents/personas/athena-agent/context-files/agents.md +55 -0
  33. package/.agent/agents/personas/athena-agent/context-files/identity.md +23 -0
  34. package/.agent/agents/personas/athena-agent/context-files/soul.md +51 -0
  35. package/.agent/agents/personas/athena-agent/context-files/user-predefined.md +15 -0
  36. package/.agent/agents/personas/athena-agent/user-context-files/system/bootstrap.md +37 -0
  37. package/.agent/agents/personas/athena-agent/user-context-files/system/user.md +45 -0
  38. package/.agent/agents/personas/da-vinci-agent/agent.json +10 -0
  39. package/.agent/agents/personas/da-vinci-agent/context-files/agents.md +55 -0
  40. package/.agent/agents/personas/da-vinci-agent/context-files/identity.md +23 -0
  41. package/.agent/agents/personas/da-vinci-agent/context-files/soul.md +51 -0
  42. package/.agent/agents/personas/da-vinci-agent/context-files/user-predefined.md +15 -0
  43. package/.agent/agents/personas/da-vinci-agent/da-vinci-frontend-ui-ux-design-profile.md +189 -0
  44. package/.agent/agents/personas/da-vinci-agent/user-context-files/system/bootstrap.md +37 -0
  45. package/.agent/agents/personas/da-vinci-agent/user-context-files/system/user.md +45 -0
  46. package/.agent/agents/personas/duong-tang-agent/agent.json +10 -0
  47. package/.agent/agents/personas/duong-tang-agent/context-files/agents.md +55 -0
  48. package/.agent/agents/personas/duong-tang-agent/context-files/identity.md +23 -0
  49. package/.agent/agents/personas/duong-tang-agent/context-files/soul.md +51 -0
  50. package/.agent/agents/personas/duong-tang-agent/context-files/user-predefined.md +15 -0
  51. package/.agent/agents/personas/duong-tang-agent/tang-monk-quality-testing-documentation-profile.md +189 -0
  52. package/.agent/agents/personas/duong-tang-agent/user-context-files/system/bootstrap.md +37 -0
  53. package/.agent/agents/personas/duong-tang-agent/user-context-files/system/user.md +45 -0
  54. package/.agent/agents/personas/gia-cat-luong-agent/agent.json +10 -0
  55. package/.agent/agents/personas/gia-cat-luong-agent/context-files/agents.md +55 -0
  56. package/.agent/agents/personas/gia-cat-luong-agent/context-files/identity.md +23 -0
  57. package/.agent/agents/personas/gia-cat-luong-agent/context-files/soul.md +51 -0
  58. package/.agent/agents/personas/gia-cat-luong-agent/context-files/user-predefined.md +15 -0
  59. package/.agent/agents/personas/gia-cat-luong-agent/kongming-research-strategy-analysis-profile.md +189 -0
  60. package/.agent/agents/personas/gia-cat-luong-agent/user-context-files/system/bootstrap.md +37 -0
  61. package/.agent/agents/personas/gia-cat-luong-agent/user-context-files/system/user.md +45 -0
  62. package/.agent/agents/personas/mihata-agent/agent.json +10 -0
  63. package/.agent/agents/personas/mihata-agent/context-files/agents.md +55 -0
  64. package/.agent/agents/personas/mihata-agent/context-files/identity.md +23 -0
  65. package/.agent/agents/personas/mihata-agent/context-files/soul.md +51 -0
  66. package/.agent/agents/personas/mihata-agent/context-files/user-predefined.md +15 -0
  67. package/.agent/agents/personas/mihata-agent/mihata-multi-agent-orchestration-profile.md +189 -0
  68. package/.agent/agents/personas/mihata-agent/user-context-files/system/bootstrap.md +37 -0
  69. package/.agent/agents/personas/mihata-agent/user-context-files/system/user.md +45 -0
  70. package/.agent/agents/personas/tesla-agent/agent.json +10 -0
  71. package/.agent/agents/personas/tesla-agent/context-files/agents.md +55 -0
  72. package/.agent/agents/personas/tesla-agent/context-files/identity.md +23 -0
  73. package/.agent/agents/personas/tesla-agent/context-files/soul.md +51 -0
  74. package/.agent/agents/personas/tesla-agent/context-files/user-predefined.md +15 -0
  75. package/.agent/agents/personas/tesla-agent/tesla-fullstack-system-optimization-profile.md +189 -0
  76. package/.agent/agents/personas/tesla-agent/user-context-files/system/bootstrap.md +37 -0
  77. package/.agent/agents/personas/tesla-agent/user-context-files/system/user.md +45 -0
  78. package/.agent/agents/personas/tu-ma-y-agent/agent.json +10 -0
  79. package/.agent/agents/personas/tu-ma-y-agent/context-files/agents.md +55 -0
  80. package/.agent/agents/personas/tu-ma-y-agent/context-files/identity.md +23 -0
  81. package/.agent/agents/personas/tu-ma-y-agent/context-files/soul.md +51 -0
  82. package/.agent/agents/personas/tu-ma-y-agent/context-files/user-predefined.md +15 -0
  83. package/.agent/agents/personas/tu-ma-y-agent/simayi-feasibility-risk-control-profile.md +189 -0
  84. package/.agent/agents/personas/tu-ma-y-agent/user-context-files/system/bootstrap.md +37 -0
  85. package/.agent/agents/personas/tu-ma-y-agent/user-context-files/system/user.md +45 -0
  86. package/.agent/agents/personas/venti-agent/agent.json +10 -0
  87. package/.agent/agents/personas/venti-agent/context-files/agents.md +55 -0
  88. package/.agent/agents/personas/venti-agent/context-files/identity.md +23 -0
  89. package/.agent/agents/personas/venti-agent/context-files/soul.md +51 -0
  90. package/.agent/agents/personas/venti-agent/context-files/user-predefined.md +15 -0
  91. package/.agent/agents/personas/venti-agent/user-context-files/system/bootstrap.md +37 -0
  92. package/.agent/agents/personas/venti-agent/user-context-files/system/user.md +45 -0
  93. package/.agent/agents/personas/venti-agent/venti-learning-communication-mentoring-profile.md +189 -0
  94. package/.agent/agents/planner.md +212 -212
  95. package/.agent/agents/python-reviewer.md +98 -98
  96. package/.agent/agents/pytorch-build-resolver.md +120 -120
  97. package/.agent/agents/refactor-cleaner.md +85 -85
  98. package/.agent/agents/rust-build-resolver.md +148 -148
  99. package/.agent/agents/rust-reviewer.md +94 -94
  100. package/.agent/agents/security-reviewer.md +108 -108
  101. package/.agent/agents/tdd-guide.md +91 -91
  102. package/.agent/agents/typescript-reviewer.md +112 -112
  103. package/.agent/contexts/dev.md +20 -0
  104. package/.agent/contexts/research.md +26 -0
  105. package/.agent/contexts/review.md +22 -0
  106. package/.agent/hooks/hooks.json +395 -0
  107. package/.agent/hooks/readme.md +222 -0
  108. package/.agent/mcp-configs/mcp-servers.json +181 -0
  109. package/.agent/rules/common/agents.md +50 -0
  110. package/.agent/rules/common/code-review.md +124 -0
  111. package/.agent/rules/common/coding-style.md +48 -0
  112. package/.agent/rules/common/development-workflow.md +44 -0
  113. package/.agent/rules/common/git-workflow.md +24 -0
  114. package/.agent/rules/common/hooks.md +30 -0
  115. package/.agent/rules/common/patterns.md +31 -0
  116. package/.agent/rules/common/performance.md +55 -0
  117. package/.agent/rules/common/security.md +29 -0
  118. package/.agent/rules/common/testing.md +29 -0
  119. package/.agent/rules/cpp/coding-style.md +44 -0
  120. package/.agent/rules/cpp/hooks.md +39 -0
  121. package/.agent/rules/cpp/patterns.md +51 -0
  122. package/.agent/rules/cpp/security.md +51 -0
  123. package/.agent/rules/cpp/testing.md +44 -0
  124. package/.agent/rules/csharp/coding-style.md +72 -0
  125. package/.agent/rules/csharp/hooks.md +25 -0
  126. package/.agent/rules/csharp/patterns.md +50 -0
  127. package/.agent/rules/csharp/security.md +58 -0
  128. package/.agent/rules/csharp/testing.md +46 -0
  129. package/.agent/rules/dart/coding-style.md +159 -0
  130. package/.agent/rules/dart/hooks.md +66 -0
  131. package/.agent/rules/dart/patterns.md +261 -0
  132. package/.agent/rules/dart/security.md +135 -0
  133. package/.agent/rules/dart/testing.md +215 -0
  134. package/.agent/rules/golang/coding-style.md +32 -0
  135. package/.agent/rules/golang/hooks.md +17 -0
  136. package/.agent/rules/golang/patterns.md +45 -0
  137. package/.agent/rules/golang/security.md +34 -0
  138. package/.agent/rules/golang/testing.md +31 -0
  139. package/.agent/rules/java/coding-style.md +114 -0
  140. package/.agent/rules/java/hooks.md +18 -0
  141. package/.agent/rules/java/patterns.md +146 -0
  142. package/.agent/rules/java/security.md +100 -0
  143. package/.agent/rules/java/testing.md +131 -0
  144. package/.agent/rules/kotlin/coding-style.md +86 -0
  145. package/.agent/rules/kotlin/hooks.md +17 -0
  146. package/.agent/rules/kotlin/patterns.md +146 -0
  147. package/.agent/rules/kotlin/security.md +82 -0
  148. package/.agent/rules/kotlin/testing.md +128 -0
  149. package/.agent/rules/perl/coding-style.md +46 -0
  150. package/.agent/rules/perl/hooks.md +22 -0
  151. package/.agent/rules/perl/patterns.md +76 -0
  152. package/.agent/rules/perl/security.md +69 -0
  153. package/.agent/rules/perl/testing.md +54 -0
  154. package/.agent/rules/php/coding-style.md +40 -0
  155. package/.agent/rules/php/hooks.md +24 -0
  156. package/.agent/rules/php/patterns.md +33 -0
  157. package/.agent/rules/php/security.md +37 -0
  158. package/.agent/rules/php/testing.md +39 -0
  159. package/.agent/rules/python/coding-style.md +42 -0
  160. package/.agent/rules/python/hooks.md +19 -0
  161. package/.agent/rules/python/patterns.md +39 -0
  162. package/.agent/rules/python/security.md +30 -0
  163. package/.agent/rules/python/testing.md +38 -0
  164. package/.agent/rules/readme.md +111 -0
  165. package/.agent/rules/rust/coding-style.md +151 -0
  166. package/.agent/rules/rust/hooks.md +16 -0
  167. package/.agent/rules/rust/patterns.md +168 -0
  168. package/.agent/rules/rust/security.md +141 -0
  169. package/.agent/rules/rust/testing.md +154 -0
  170. package/.agent/rules/swift/coding-style.md +47 -0
  171. package/.agent/rules/swift/hooks.md +20 -0
  172. package/.agent/rules/swift/patterns.md +66 -0
  173. package/.agent/rules/swift/security.md +33 -0
  174. package/.agent/rules/swift/testing.md +45 -0
  175. package/.agent/rules/typescript/coding-style.md +199 -0
  176. package/.agent/rules/typescript/hooks.md +22 -0
  177. package/.agent/rules/typescript/patterns.md +52 -0
  178. package/.agent/rules/typescript/security.md +28 -0
  179. package/.agent/rules/typescript/testing.md +18 -0
  180. package/.agent/rules/web/coding-style.md +96 -0
  181. package/.agent/rules/web/design-quality.md +63 -0
  182. package/.agent/rules/web/hooks.md +120 -0
  183. package/.agent/rules/web/patterns.md +79 -0
  184. package/.agent/rules/web/performance.md +64 -0
  185. package/.agent/rules/web/security.md +57 -0
  186. package/.agent/rules/web/testing.md +55 -0
  187. package/.agent/rules/zh/agents.md +50 -0
  188. package/.agent/rules/zh/code-review.md +124 -0
  189. package/.agent/rules/zh/coding-style.md +48 -0
  190. package/.agent/rules/zh/development-workflow.md +44 -0
  191. package/.agent/rules/zh/git-workflow.md +24 -0
  192. package/.agent/rules/zh/hooks.md +30 -0
  193. package/.agent/rules/zh/patterns.md +31 -0
  194. package/.agent/rules/zh/performance.md +55 -0
  195. package/.agent/rules/zh/readme.md +108 -0
  196. package/.agent/rules/zh/security.md +29 -0
  197. package/.agent/rules/zh/testing.md +29 -0
  198. package/.agent/skills/agent-eval/SKILL.md +145 -0
  199. package/.agent/skills/agent-harness-construction/SKILL.md +73 -0
  200. package/.agent/skills/agent-payment-x402/SKILL.md +178 -0
  201. package/.agent/skills/agentic-engineering/SKILL.md +63 -0
  202. package/.agent/skills/ai-first-engineering/SKILL.md +51 -0
  203. package/.agent/skills/ai-regression-testing/SKILL.md +385 -0
  204. package/.agent/skills/android-clean-architecture/SKILL.md +339 -0
  205. package/.agent/skills/api-design/SKILL.md +523 -0
  206. package/.agent/skills/architecture-decision-records/SKILL.md +179 -0
  207. package/.agent/skills/article-writing/SKILL.md +79 -0
  208. package/.agent/skills/autonomous-agent-harness/SKILL.md +267 -0
  209. package/.agent/skills/autonomous-loops/SKILL.md +610 -0
  210. package/.agent/skills/backend-patterns/SKILL.md +598 -0
  211. package/.agent/skills/benchmark/SKILL.md +93 -0
  212. package/.agent/skills/blueprint/SKILL.md +105 -0
  213. package/.agent/skills/brand-voice/SKILL.md +97 -0
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  218. package/.agent/skills/carrier-relationship-management/SKILL.md +212 -0
  219. package/.agent/skills/ck/SKILL.md +147 -0
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  229. package/.agent/skills/claude-api/SKILL.md +337 -0
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  232. package/.agent/skills/clickhouse-io/SKILL.md +439 -0
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  234. package/.agent/skills/coding-standards/SKILL.md +530 -0
  235. package/.agent/skills/compose-multiplatform-patterns/SKILL.md +299 -0
  236. package/.agent/skills/configure-ecc/SKILL.md +367 -0
  237. package/.agent/skills/connections-optimizer/SKILL.md +189 -0
  238. package/.agent/skills/content-engine/SKILL.md +131 -0
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  241. package/.agent/skills/continuous-agent-loop/SKILL.md +45 -0
  242. package/.agent/skills/continuous-learning/SKILL.md +119 -0
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@@ -0,0 +1,1426 @@
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+ #!/usr/bin/env python3
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+ """
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+ Instinct CLI - Manage instincts for Continuous Learning v2
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+
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+ v2.1: Project-scoped instincts — different projects get different instincts,
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+ with global instincts applied universally.
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+
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+ Commands:
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+ status - Show all instincts (project + global) and their status
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+ import - Import instincts from file or URL
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+ export - Export instincts to file
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+ evolve - Cluster instincts into skills/commands/agents
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+ promote - Promote project instincts to global scope
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+ projects - List all known projects and their instinct counts
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+ prune - Delete pending instincts older than 30 days (TTL)
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+ """
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+
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+ import argparse
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+ import json
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+ import hashlib
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+ import os
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+ import subprocess
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+ import sys
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+ import re
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+ import urllib.request
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+ from pathlib import Path
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+ from datetime import datetime, timedelta, timezone
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+ from collections import defaultdict
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+ from typing import Optional
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+
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+ try:
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+ import fcntl
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+ _HAS_FCNTL = True
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+ except ImportError:
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+ _HAS_FCNTL = False # Windows — skip file locking
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+
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+ # ─────────────────────────────────────────────
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+ # Configuration
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+ # ─────────────────────────────────────────────
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+
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+ HOMUNCULUS_DIR = Path.home() / ".claude" / "homunculus"
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+ PROJECTS_DIR = HOMUNCULUS_DIR / "projects"
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+ REGISTRY_FILE = HOMUNCULUS_DIR / "projects.json"
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+
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+ # Global (non-project-scoped) paths
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+ GLOBAL_INSTINCTS_DIR = HOMUNCULUS_DIR / "instincts"
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+ GLOBAL_PERSONAL_DIR = GLOBAL_INSTINCTS_DIR / "personal"
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+ GLOBAL_INHERITED_DIR = GLOBAL_INSTINCTS_DIR / "inherited"
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+ GLOBAL_EVOLVED_DIR = HOMUNCULUS_DIR / "evolved"
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+ GLOBAL_OBSERVATIONS_FILE = HOMUNCULUS_DIR / "observations.jsonl"
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+
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+ # Thresholds for auto-promotion
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+ PROMOTE_CONFIDENCE_THRESHOLD = 0.8
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+ PROMOTE_MIN_PROJECTS = 2
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+ ALLOWED_INSTINCT_EXTENSIONS = (".yaml", ".yml", ".md")
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+
57
+ # Default TTL for pending instincts (days)
58
+ PENDING_TTL_DAYS = 30
59
+ # Warning threshold: show expiry warning when instinct expires within this many days
60
+ PENDING_EXPIRY_WARNING_DAYS = 7
61
+
62
+ # Ensure global directories exist (deferred to avoid side effects at import time)
63
+ def _ensure_global_dirs():
64
+ for d in [GLOBAL_PERSONAL_DIR, GLOBAL_INHERITED_DIR,
65
+ GLOBAL_EVOLVED_DIR / "skills", GLOBAL_EVOLVED_DIR / "commands", GLOBAL_EVOLVED_DIR / "agents",
66
+ PROJECTS_DIR]:
67
+ d.mkdir(parents=True, exist_ok=True)
68
+
69
+
70
+ # ─────────────────────────────────────────────
71
+ # Path Validation
72
+ # ─────────────────────────────────────────────
73
+
74
+ def _validate_file_path(path_str: str, must_exist: bool = False) -> Path:
75
+ """Validate and resolve a file path, guarding against path traversal.
76
+
77
+ Raises ValueError if the path is invalid or suspicious.
78
+ """
79
+ path = Path(path_str).expanduser().resolve()
80
+
81
+ # Block paths that escape into system directories
82
+ # We block specific system paths but allow temp dirs (/var/folders on macOS)
83
+ blocked_prefixes = [
84
+ "/etc", "/usr", "/bin", "/sbin", "/proc", "/sys",
85
+ "/var/log", "/var/run", "/var/lib", "/var/spool",
86
+ # macOS resolves /etc → /private/etc
87
+ "/private/etc",
88
+ "/private/var/log", "/private/var/run", "/private/var/db",
89
+ ]
90
+ path_s = str(path)
91
+ for prefix in blocked_prefixes:
92
+ if path_s.startswith(prefix + "/") or path_s == prefix:
93
+ raise ValueError(f"Path '{path}' targets a system directory")
94
+
95
+ if must_exist and not path.exists():
96
+ raise ValueError(f"Path does not exist: {path}")
97
+
98
+ return path
99
+
100
+
101
+ def _validate_instinct_id(instinct_id: str) -> bool:
102
+ """Validate instinct IDs before using them in filenames."""
103
+ if not instinct_id or len(instinct_id) > 128:
104
+ return False
105
+ if "/" in instinct_id or "\\" in instinct_id:
106
+ return False
107
+ if ".." in instinct_id:
108
+ return False
109
+ if instinct_id.startswith("."):
110
+ return False
111
+ return bool(re.match(r"^[A-Za-z0-9][A-Za-z0-9._-]*$", instinct_id))
112
+
113
+
114
+ def _yaml_quote(value: str) -> str:
115
+ """Quote a string for safe YAML frontmatter serialization.
116
+
117
+ Uses double quotes and escapes embedded double-quote characters to
118
+ prevent malformed YAML when the value contains quotes.
119
+ """
120
+ escaped = value.replace('\\', '\\\\').replace('"', '\\"')
121
+ return f'"{escaped}"'
122
+
123
+
124
+ # ─────────────────────────────────────────────
125
+ # Project Detection (Python equivalent of detect-project.sh)
126
+ # ─────────────────────────────────────────────
127
+
128
+ def detect_project() -> dict:
129
+ """Detect current project context. Returns dict with id, name, root, project_dir."""
130
+ project_root = None
131
+
132
+ # 1. CLAUDE_PROJECT_DIR env var
133
+ env_dir = os.environ.get("CLAUDE_PROJECT_DIR")
134
+ if env_dir and os.path.isdir(env_dir):
135
+ project_root = env_dir
136
+
137
+ # 2. git repo root
138
+ if not project_root:
139
+ try:
140
+ result = subprocess.run(
141
+ ["git", "rev-parse", "--show-toplevel"],
142
+ capture_output=True, text=True, timeout=5
143
+ )
144
+ if result.returncode == 0:
145
+ project_root = result.stdout.strip()
146
+ except (subprocess.TimeoutExpired, FileNotFoundError):
147
+ pass
148
+
149
+ # Normalize: strip trailing slashes to keep basename and hash stable
150
+ if project_root:
151
+ project_root = project_root.rstrip("/")
152
+
153
+ # 3. No project — global fallback
154
+ if not project_root:
155
+ return {
156
+ "id": "global",
157
+ "name": "global",
158
+ "root": "",
159
+ "project_dir": HOMUNCULUS_DIR,
160
+ "instincts_personal": GLOBAL_PERSONAL_DIR,
161
+ "instincts_inherited": GLOBAL_INHERITED_DIR,
162
+ "evolved_dir": GLOBAL_EVOLVED_DIR,
163
+ "observations_file": GLOBAL_OBSERVATIONS_FILE,
164
+ }
165
+
166
+ project_name = os.path.basename(project_root)
167
+
168
+ # Derive project ID from git remote URL or path
169
+ remote_url = ""
170
+ try:
171
+ result = subprocess.run(
172
+ ["git", "-C", project_root, "remote", "get-url", "origin"],
173
+ capture_output=True, text=True, timeout=5
174
+ )
175
+ if result.returncode == 0:
176
+ remote_url = result.stdout.strip()
177
+ except (subprocess.TimeoutExpired, FileNotFoundError):
178
+ pass
179
+
180
+ hash_source = remote_url if remote_url else project_root
181
+ project_id = hashlib.sha256(hash_source.encode()).hexdigest()[:12]
182
+
183
+ project_dir = PROJECTS_DIR / project_id
184
+
185
+ # Ensure project directory structure
186
+ for d in [
187
+ project_dir / "instincts" / "personal",
188
+ project_dir / "instincts" / "inherited",
189
+ project_dir / "observations.archive",
190
+ project_dir / "evolved" / "skills",
191
+ project_dir / "evolved" / "commands",
192
+ project_dir / "evolved" / "agents",
193
+ ]:
194
+ d.mkdir(parents=True, exist_ok=True)
195
+
196
+ # Update registry
197
+ _update_registry(project_id, project_name, project_root, remote_url)
198
+
199
+ return {
200
+ "id": project_id,
201
+ "name": project_name,
202
+ "root": project_root,
203
+ "remote": remote_url,
204
+ "project_dir": project_dir,
205
+ "instincts_personal": project_dir / "instincts" / "personal",
206
+ "instincts_inherited": project_dir / "instincts" / "inherited",
207
+ "evolved_dir": project_dir / "evolved",
208
+ "observations_file": project_dir / "observations.jsonl",
209
+ }
210
+
211
+
212
+ def _update_registry(pid: str, pname: str, proot: str, premote: str) -> None:
213
+ """Update the projects.json registry.
214
+
215
+ Uses file locking (where available) to prevent concurrent sessions from
216
+ overwriting each other's updates.
217
+ """
218
+ REGISTRY_FILE.parent.mkdir(parents=True, exist_ok=True)
219
+ lock_path = REGISTRY_FILE.parent / f".{REGISTRY_FILE.name}.lock"
220
+ lock_fd = None
221
+
222
+ try:
223
+ # Acquire advisory lock to serialize read-modify-write
224
+ if _HAS_FCNTL:
225
+ lock_fd = open(lock_path, "w")
226
+ fcntl.flock(lock_fd, fcntl.LOCK_EX)
227
+
228
+ try:
229
+ with open(REGISTRY_FILE, encoding="utf-8") as f:
230
+ registry = json.load(f)
231
+ except (FileNotFoundError, json.JSONDecodeError):
232
+ registry = {}
233
+
234
+ registry[pid] = {
235
+ "name": pname,
236
+ "root": proot,
237
+ "remote": premote,
238
+ "last_seen": datetime.now(timezone.utc).isoformat().replace("+00:00", "Z"),
239
+ }
240
+
241
+ tmp_file = REGISTRY_FILE.parent / f".{REGISTRY_FILE.name}.tmp.{os.getpid()}"
242
+ with open(tmp_file, "w", encoding="utf-8") as f:
243
+ json.dump(registry, f, indent=2)
244
+ f.flush()
245
+ os.fsync(f.fileno())
246
+ os.replace(tmp_file, REGISTRY_FILE)
247
+ finally:
248
+ if lock_fd is not None:
249
+ fcntl.flock(lock_fd, fcntl.LOCK_UN)
250
+ lock_fd.close()
251
+
252
+
253
+ def load_registry() -> dict:
254
+ """Load the projects registry."""
255
+ try:
256
+ with open(REGISTRY_FILE, encoding="utf-8") as f:
257
+ return json.load(f)
258
+ except (FileNotFoundError, json.JSONDecodeError):
259
+ return {}
260
+
261
+
262
+ # ─────────────────────────────────────────────
263
+ # Instinct Parser
264
+ # ─────────────────────────────────────────────
265
+
266
+ def parse_instinct_file(content: str) -> list[dict]:
267
+ """Parse YAML-like instinct file format.
268
+
269
+ Each instinct is delimited by a pair of ``---`` markers (YAML frontmatter).
270
+ Note: ``---`` is always treated as a frontmatter boundary; instinct body
271
+ content must use ``***`` or ``___`` for horizontal rules to avoid ambiguity.
272
+ """
273
+ instincts = []
274
+ current = {}
275
+ in_frontmatter = False
276
+ content_lines = []
277
+
278
+ for line in content.split('\n'):
279
+ if line.strip() == '---':
280
+ if in_frontmatter:
281
+ # End of frontmatter - content comes next
282
+ in_frontmatter = False
283
+ else:
284
+ # Start of new frontmatter block
285
+ in_frontmatter = True
286
+ if current:
287
+ current['content'] = '\n'.join(content_lines).strip()
288
+ instincts.append(current)
289
+ current = {}
290
+ content_lines = []
291
+ elif in_frontmatter:
292
+ # Parse YAML-like frontmatter
293
+ if ':' in line:
294
+ key, value = line.split(':', 1)
295
+ key = key.strip()
296
+ value = value.strip()
297
+ # Unescape quoted YAML strings
298
+ if value.startswith('"') and value.endswith('"'):
299
+ value = value[1:-1].replace('\\"', '"').replace('\\\\', '\\')
300
+ elif value.startswith("'") and value.endswith("'"):
301
+ value = value[1:-1].replace("''", "'")
302
+ if key == 'confidence':
303
+ try:
304
+ current[key] = float(value)
305
+ except ValueError:
306
+ current[key] = 0.5 # default on malformed confidence
307
+ else:
308
+ current[key] = value
309
+ else:
310
+ content_lines.append(line)
311
+
312
+ # Don't forget the last instinct
313
+ if current:
314
+ current['content'] = '\n'.join(content_lines).strip()
315
+ instincts.append(current)
316
+
317
+ return [i for i in instincts if i.get('id')]
318
+
319
+
320
+ def _load_instincts_from_dir(directory: Path, source_type: str, scope_label: str) -> list[dict]:
321
+ """Load instincts from a single directory."""
322
+ instincts = []
323
+ if not directory.exists():
324
+ return instincts
325
+ files = [
326
+ file for file in sorted(directory.iterdir())
327
+ if file.is_file() and file.suffix.lower() in ALLOWED_INSTINCT_EXTENSIONS
328
+ ]
329
+ for file in files:
330
+ try:
331
+ content = file.read_text(encoding="utf-8")
332
+ parsed = parse_instinct_file(content)
333
+ for inst in parsed:
334
+ inst['_source_file'] = str(file)
335
+ inst['_source_type'] = source_type
336
+ inst['_scope_label'] = scope_label
337
+ # Default scope if not set in frontmatter
338
+ if 'scope' not in inst:
339
+ inst['scope'] = scope_label
340
+ instincts.extend(parsed)
341
+ except Exception as e:
342
+ print(f"Warning: Failed to parse {file}: {e}", file=sys.stderr)
343
+ return instincts
344
+
345
+
346
+ def load_all_instincts(project: dict, include_global: bool = True) -> list[dict]:
347
+ """Load all instincts: project-scoped + global.
348
+
349
+ Project-scoped instincts take precedence over global ones when IDs conflict.
350
+ """
351
+ instincts = []
352
+
353
+ # 1. Load project-scoped instincts (if not already global)
354
+ if project["id"] != "global":
355
+ instincts.extend(_load_instincts_from_dir(
356
+ project["instincts_personal"], "personal", "project"
357
+ ))
358
+ instincts.extend(_load_instincts_from_dir(
359
+ project["instincts_inherited"], "inherited", "project"
360
+ ))
361
+
362
+ # 2. Load global instincts
363
+ if include_global:
364
+ global_instincts = []
365
+ global_instincts.extend(_load_instincts_from_dir(
366
+ GLOBAL_PERSONAL_DIR, "personal", "global"
367
+ ))
368
+ global_instincts.extend(_load_instincts_from_dir(
369
+ GLOBAL_INHERITED_DIR, "inherited", "global"
370
+ ))
371
+
372
+ # Deduplicate: project-scoped wins over global when same ID
373
+ project_ids = {i.get('id') for i in instincts}
374
+ for gi in global_instincts:
375
+ if gi.get('id') not in project_ids:
376
+ instincts.append(gi)
377
+
378
+ return instincts
379
+
380
+
381
+ def load_project_only_instincts(project: dict) -> list[dict]:
382
+ """Load only project-scoped instincts (no global).
383
+
384
+ In global fallback mode (no git project), returns global instincts.
385
+ """
386
+ if project.get("id") == "global":
387
+ instincts = _load_instincts_from_dir(GLOBAL_PERSONAL_DIR, "personal", "global")
388
+ instincts += _load_instincts_from_dir(GLOBAL_INHERITED_DIR, "inherited", "global")
389
+ return instincts
390
+ return load_all_instincts(project, include_global=False)
391
+
392
+
393
+ # ─────────────────────────────────────────────
394
+ # Status Command
395
+ # ─────────────────────────────────────────────
396
+
397
+ def cmd_status(args) -> int:
398
+ """Show status of all instincts (project + global)."""
399
+ project = detect_project()
400
+ instincts = load_all_instincts(project)
401
+
402
+ if not instincts:
403
+ print("No instincts found.")
404
+ print(f"\nProject: {project['name']} ({project['id']})")
405
+ print(f" Project instincts: {project['instincts_personal']}")
406
+ print(f" Global instincts: {GLOBAL_PERSONAL_DIR}")
407
+ else:
408
+ # Split by scope
409
+ project_instincts = [i for i in instincts if i.get('_scope_label') == 'project']
410
+ global_instincts = [i for i in instincts if i.get('_scope_label') == 'global']
411
+
412
+ # Print header
413
+ print(f"\n{'='*60}")
414
+ print(f" INSTINCT STATUS - {len(instincts)} total")
415
+ print(f"{'='*60}\n")
416
+
417
+ print(f" Project: {project['name']} ({project['id']})")
418
+ print(f" Project instincts: {len(project_instincts)}")
419
+ print(f" Global instincts: {len(global_instincts)}")
420
+ print()
421
+
422
+ # Print project-scoped instincts
423
+ if project_instincts:
424
+ print(f"## PROJECT-SCOPED ({project['name']})")
425
+ print()
426
+ _print_instincts_by_domain(project_instincts)
427
+
428
+ # Print global instincts
429
+ if global_instincts:
430
+ print("## GLOBAL (apply to all projects)")
431
+ print()
432
+ _print_instincts_by_domain(global_instincts)
433
+
434
+ # Observations stats
435
+ obs_file = project.get("observations_file")
436
+ if obs_file and Path(obs_file).exists():
437
+ with open(obs_file, encoding="utf-8") as f:
438
+ obs_count = sum(1 for _ in f)
439
+ print(f"-" * 60)
440
+ print(f" Observations: {obs_count} events logged")
441
+ print(f" File: {obs_file}")
442
+
443
+ # Pending instinct stats
444
+ pending = _collect_pending_instincts()
445
+ if pending:
446
+ print(f"\n{'-'*60}")
447
+ print(f" Pending instincts: {len(pending)} awaiting review")
448
+
449
+ if len(pending) >= 5:
450
+ print(f"\n \u26a0 {len(pending)} pending instincts awaiting review."
451
+ f" Unreviewed instincts auto-delete after {PENDING_TTL_DAYS} days.")
452
+
453
+ # Show instincts expiring within PENDING_EXPIRY_WARNING_DAYS
454
+ expiry_threshold = PENDING_TTL_DAYS - PENDING_EXPIRY_WARNING_DAYS
455
+ expiring_soon = [p for p in pending
456
+ if p["age_days"] >= expiry_threshold and p["age_days"] < PENDING_TTL_DAYS]
457
+ if expiring_soon:
458
+ print(f"\n Expiring within {PENDING_EXPIRY_WARNING_DAYS} days:")
459
+ for item in expiring_soon:
460
+ days_left = max(0, PENDING_TTL_DAYS - item["age_days"])
461
+ print(f" - {item['name']} ({days_left}d remaining)")
462
+
463
+ print(f"\n{'='*60}\n")
464
+ return 0
465
+
466
+
467
+ def _print_instincts_by_domain(instincts: list[dict]) -> None:
468
+ """Helper to print instincts grouped by domain."""
469
+ by_domain = defaultdict(list)
470
+ for inst in instincts:
471
+ domain = inst.get('domain', 'general')
472
+ by_domain[domain].append(inst)
473
+
474
+ for domain in sorted(by_domain.keys()):
475
+ domain_instincts = by_domain[domain]
476
+ print(f" ### {domain.upper()} ({len(domain_instincts)})")
477
+ print()
478
+
479
+ for inst in sorted(domain_instincts, key=lambda x: -x.get('confidence', 0.5)):
480
+ conf = inst.get('confidence', 0.5)
481
+ conf_bar = '\u2588' * int(conf * 10) + '\u2591' * (10 - int(conf * 10))
482
+ trigger = inst.get('trigger', 'unknown trigger')
483
+ scope_tag = f"[{inst.get('scope', '?')}]"
484
+
485
+ print(f" {conf_bar} {int(conf*100):3d}% {inst.get('id', 'unnamed')} {scope_tag}")
486
+ print(f" trigger: {trigger}")
487
+
488
+ # Extract action from content
489
+ content = inst.get('content', '')
490
+ action_match = re.search(r'## Action\s*\n\s*(.+?)(?:\n\n|\n##|$)', content, re.DOTALL)
491
+ if action_match:
492
+ action = action_match.group(1).strip().split('\n')[0]
493
+ print(f" action: {action[:60]}{'...' if len(action) > 60 else ''}")
494
+
495
+ print()
496
+
497
+
498
+ # ─────────────────────────────────────────────
499
+ # Import Command
500
+ # ─────────────────────────────────────────────
501
+
502
+ def cmd_import(args) -> int:
503
+ """Import instincts from file or URL."""
504
+ project = detect_project()
505
+ source = args.source
506
+
507
+ # Determine target scope
508
+ target_scope = args.scope or "project"
509
+ if target_scope == "project" and project["id"] == "global":
510
+ print("No project detected. Importing as global scope.")
511
+ target_scope = "global"
512
+
513
+ # Fetch content
514
+ if source.startswith('http://') or source.startswith('https://'):
515
+ print(f"Fetching from URL: {source}")
516
+ try:
517
+ with urllib.request.urlopen(source) as response:
518
+ content = response.read().decode('utf-8')
519
+ except Exception as e:
520
+ print(f"Error fetching URL: {e}", file=sys.stderr)
521
+ return 1
522
+ else:
523
+ try:
524
+ path = _validate_file_path(source, must_exist=True)
525
+ except ValueError as e:
526
+ print(f"Invalid path: {e}", file=sys.stderr)
527
+ return 1
528
+ if not path.is_file():
529
+ print(f"Error: '{path}' is not a regular file.", file=sys.stderr)
530
+ return 1
531
+ content = path.read_text(encoding="utf-8")
532
+
533
+ # Parse instincts
534
+ new_instincts = parse_instinct_file(content)
535
+ if not new_instincts:
536
+ print("No valid instincts found in source.")
537
+ return 1
538
+
539
+ print(f"\nFound {len(new_instincts)} instincts to import.")
540
+ print(f"Target scope: {target_scope}")
541
+ if target_scope == "project":
542
+ print(f"Target project: {project['name']} ({project['id']})")
543
+ print()
544
+
545
+ # Load existing instincts for dedup, scoped to the target to avoid
546
+ # cross-scope shadowing (project instincts hiding global ones or vice versa)
547
+ if target_scope == "global":
548
+ existing = _load_instincts_from_dir(GLOBAL_PERSONAL_DIR, "personal", "global")
549
+ existing += _load_instincts_from_dir(GLOBAL_INHERITED_DIR, "inherited", "global")
550
+ else:
551
+ existing = load_project_only_instincts(project)
552
+ existing_ids = {i.get('id') for i in existing}
553
+
554
+ # Deduplicate within the import source: keep highest confidence per ID
555
+ best_by_id = {}
556
+ for inst in new_instincts:
557
+ inst_id = inst.get('id')
558
+ if inst_id not in best_by_id or inst.get('confidence', 0.5) > best_by_id[inst_id].get('confidence', 0.5):
559
+ best_by_id[inst_id] = inst
560
+ deduped_instincts = list(best_by_id.values())
561
+
562
+ # Categorize against existing instincts on disk
563
+ to_add = []
564
+ duplicates = []
565
+ to_update = []
566
+
567
+ for inst in deduped_instincts:
568
+ inst_id = inst.get('id')
569
+ if inst_id in existing_ids:
570
+ existing_inst = next((e for e in existing if e.get('id') == inst_id), None)
571
+ if existing_inst:
572
+ if inst.get('confidence', 0) > existing_inst.get('confidence', 0):
573
+ to_update.append(inst)
574
+ else:
575
+ duplicates.append(inst)
576
+ else:
577
+ to_add.append(inst)
578
+
579
+ # Filter by minimum confidence
580
+ min_conf = args.min_confidence if args.min_confidence is not None else 0.0
581
+ to_add = [i for i in to_add if i.get('confidence', 0.5) >= min_conf]
582
+ to_update = [i for i in to_update if i.get('confidence', 0.5) >= min_conf]
583
+
584
+ # Display summary
585
+ if to_add:
586
+ print(f"NEW ({len(to_add)}):")
587
+ for inst in to_add:
588
+ print(f" + {inst.get('id')} (confidence: {inst.get('confidence', 0.5):.2f})")
589
+
590
+ if to_update:
591
+ print(f"\nUPDATE ({len(to_update)}):")
592
+ for inst in to_update:
593
+ print(f" ~ {inst.get('id')} (confidence: {inst.get('confidence', 0.5):.2f})")
594
+
595
+ if duplicates:
596
+ print(f"\nSKIP ({len(duplicates)} - already exists with equal/higher confidence):")
597
+ for inst in duplicates[:5]:
598
+ print(f" - {inst.get('id')}")
599
+ if len(duplicates) > 5:
600
+ print(f" ... and {len(duplicates) - 5} more")
601
+
602
+ if args.dry_run:
603
+ print("\n[DRY RUN] No changes made.")
604
+ return 0
605
+
606
+ if not to_add and not to_update:
607
+ print("\nNothing to import.")
608
+ return 0
609
+
610
+ # Confirm
611
+ if not args.force:
612
+ response = input(f"\nImport {len(to_add)} new, update {len(to_update)}? [y/N] ")
613
+ if response.lower() != 'y':
614
+ print("Cancelled.")
615
+ return 0
616
+
617
+ # Determine output directory based on scope
618
+ if target_scope == "global":
619
+ output_dir = GLOBAL_INHERITED_DIR
620
+ else:
621
+ output_dir = project["instincts_inherited"]
622
+
623
+ output_dir.mkdir(parents=True, exist_ok=True)
624
+
625
+ # Collect stale files for instincts being updated (deleted after new file is written).
626
+ # Allow deletion from any subdirectory (personal/ or inherited/) within the
627
+ # target scope to prevent the same ID existing in both places. Guard against
628
+ # cross-scope deletion by restricting to the scope's instincts root.
629
+ if target_scope == "global":
630
+ scope_root = GLOBAL_INSTINCTS_DIR.resolve()
631
+ else:
632
+ scope_root = (project["project_dir"] / "instincts").resolve() if project["id"] != "global" else GLOBAL_INSTINCTS_DIR.resolve()
633
+ stale_paths = []
634
+ for inst in to_update:
635
+ inst_id = inst.get('id')
636
+ stale = next((e for e in existing if e.get('id') == inst_id), None)
637
+ if stale and stale.get('_source_file'):
638
+ stale_path = Path(stale['_source_file']).resolve()
639
+ if stale_path.exists() and str(stale_path).startswith(str(scope_root) + os.sep):
640
+ stale_paths.append(stale_path)
641
+
642
+ # Write new file first (safe: if this fails, stale files are preserved)
643
+ timestamp = datetime.now().strftime('%Y%m%d-%H%M%S')
644
+ source_name = Path(source).stem if not source.startswith('http') else 'web-import'
645
+ output_file = output_dir / f"{source_name}-{timestamp}.yaml"
646
+
647
+ all_to_write = to_add + to_update
648
+ output_content = f"# Imported from {source}\n# Date: {datetime.now().isoformat()}\n# Scope: {target_scope}\n"
649
+ if target_scope == "project":
650
+ output_content += f"# Project: {project['name']} ({project['id']})\n"
651
+ output_content += "\n"
652
+
653
+ for inst in all_to_write:
654
+ output_content += "---\n"
655
+ output_content += f"id: {inst.get('id')}\n"
656
+ output_content += f"trigger: {_yaml_quote(inst.get('trigger', 'unknown'))}\n"
657
+ output_content += f"confidence: {inst.get('confidence', 0.5)}\n"
658
+ output_content += f"domain: {inst.get('domain', 'general')}\n"
659
+ output_content += "source: inherited\n"
660
+ output_content += f"scope: {target_scope}\n"
661
+ output_content += f"imported_from: {_yaml_quote(source)}\n"
662
+ if target_scope == "project":
663
+ output_content += f"project_id: {project['id']}\n"
664
+ output_content += f"project_name: {project['name']}\n"
665
+ if inst.get('source_repo'):
666
+ output_content += f"source_repo: {inst.get('source_repo')}\n"
667
+ output_content += "---\n\n"
668
+ output_content += inst.get('content', '') + "\n\n"
669
+
670
+ output_file.write_text(output_content, encoding="utf-8")
671
+
672
+ # Remove stale files only after the new file has been written successfully
673
+ for stale_path in stale_paths:
674
+ try:
675
+ stale_path.unlink()
676
+ except OSError:
677
+ pass # best-effort removal
678
+
679
+ print(f"\nImport complete!")
680
+ print(f" Scope: {target_scope}")
681
+ print(f" Added: {len(to_add)}")
682
+ print(f" Updated: {len(to_update)}")
683
+ print(f" Saved to: {output_file}")
684
+
685
+ return 0
686
+
687
+
688
+ # ─────────────────────────────────────────────
689
+ # Export Command
690
+ # ─────────────────────────────────────────────
691
+
692
+ def cmd_export(args) -> int:
693
+ """Export instincts to file."""
694
+ project = detect_project()
695
+
696
+ # Determine what to export based on scope filter
697
+ if args.scope == "project":
698
+ instincts = load_project_only_instincts(project)
699
+ elif args.scope == "global":
700
+ instincts = _load_instincts_from_dir(GLOBAL_PERSONAL_DIR, "personal", "global")
701
+ instincts += _load_instincts_from_dir(GLOBAL_INHERITED_DIR, "inherited", "global")
702
+ else:
703
+ instincts = load_all_instincts(project)
704
+
705
+ if not instincts:
706
+ print("No instincts to export.")
707
+ return 1
708
+
709
+ # Filter by domain if specified
710
+ if args.domain:
711
+ instincts = [i for i in instincts if i.get('domain') == args.domain]
712
+
713
+ # Filter by minimum confidence
714
+ if args.min_confidence:
715
+ instincts = [i for i in instincts if i.get('confidence', 0.5) >= args.min_confidence]
716
+
717
+ if not instincts:
718
+ print("No instincts match the criteria.")
719
+ return 1
720
+
721
+ # Generate output
722
+ output = f"# Instincts export\n# Date: {datetime.now().isoformat()}\n# Total: {len(instincts)}\n"
723
+ if args.scope:
724
+ output += f"# Scope: {args.scope}\n"
725
+ if project["id"] != "global":
726
+ output += f"# Project: {project['name']} ({project['id']})\n"
727
+ output += "\n"
728
+
729
+ for inst in instincts:
730
+ output += "---\n"
731
+ for key in ['id', 'trigger', 'confidence', 'domain', 'source', 'scope',
732
+ 'project_id', 'project_name', 'source_repo']:
733
+ if inst.get(key):
734
+ value = inst[key]
735
+ if key == 'trigger':
736
+ output += f'{key}: {_yaml_quote(value)}\n'
737
+ else:
738
+ output += f"{key}: {value}\n"
739
+ output += "---\n\n"
740
+ output += inst.get('content', '') + "\n\n"
741
+
742
+ # Write to file or stdout
743
+ if args.output:
744
+ try:
745
+ out_path = _validate_file_path(args.output)
746
+ except ValueError as e:
747
+ print(f"Invalid output path: {e}", file=sys.stderr)
748
+ return 1
749
+ if out_path.is_dir():
750
+ print(f"Error: '{out_path}' is a directory, not a file.", file=sys.stderr)
751
+ return 1
752
+ out_path.parent.mkdir(parents=True, exist_ok=True)
753
+ out_path.write_text(output, encoding="utf-8")
754
+ print(f"Exported {len(instincts)} instincts to {out_path}")
755
+ else:
756
+ print(output)
757
+
758
+ return 0
759
+
760
+
761
+ # ─────────────────────────────────────────────
762
+ # Evolve Command
763
+ # ─────────────────────────────────────────────
764
+
765
+ def cmd_evolve(args) -> int:
766
+ """Analyze instincts and suggest evolutions to skills/commands/agents."""
767
+ project = detect_project()
768
+ instincts = load_all_instincts(project)
769
+
770
+ if len(instincts) < 3:
771
+ print("Need at least 3 instincts to analyze patterns.")
772
+ print(f"Currently have: {len(instincts)}")
773
+ return 1
774
+
775
+ project_instincts = [i for i in instincts if i.get('_scope_label') == 'project']
776
+ global_instincts = [i for i in instincts if i.get('_scope_label') == 'global']
777
+
778
+ print(f"\n{'='*60}")
779
+ print(f" EVOLVE ANALYSIS - {len(instincts)} instincts")
780
+ print(f" Project: {project['name']} ({project['id']})")
781
+ print(f" Project-scoped: {len(project_instincts)} | Global: {len(global_instincts)}")
782
+ print(f"{'='*60}\n")
783
+
784
+ # Group by domain
785
+ by_domain = defaultdict(list)
786
+ for inst in instincts:
787
+ domain = inst.get('domain', 'general')
788
+ by_domain[domain].append(inst)
789
+
790
+ # High-confidence instincts by domain (candidates for skills)
791
+ high_conf = [i for i in instincts if i.get('confidence', 0) >= 0.8]
792
+ print(f"High confidence instincts (>=80%): {len(high_conf)}")
793
+
794
+ # Find clusters (instincts with similar triggers)
795
+ trigger_clusters = defaultdict(list)
796
+ for inst in instincts:
797
+ trigger = inst.get('trigger', '')
798
+ # Normalize trigger
799
+ trigger_key = trigger.lower()
800
+ for keyword in ['when', 'creating', 'writing', 'adding', 'implementing', 'testing']:
801
+ trigger_key = trigger_key.replace(keyword, '').strip()
802
+ trigger_clusters[trigger_key].append(inst)
803
+
804
+ # Find clusters with 2+ instincts (good skill candidates)
805
+ skill_candidates = []
806
+ for trigger, cluster in trigger_clusters.items():
807
+ if len(cluster) >= 2:
808
+ avg_conf = sum(i.get('confidence', 0.5) for i in cluster) / len(cluster)
809
+ skill_candidates.append({
810
+ 'trigger': trigger,
811
+ 'instincts': cluster,
812
+ 'avg_confidence': avg_conf,
813
+ 'domains': list(set(i.get('domain', 'general') for i in cluster)),
814
+ 'scopes': list(set(i.get('scope', 'project') for i in cluster)),
815
+ })
816
+
817
+ # Sort by cluster size and confidence
818
+ skill_candidates.sort(key=lambda x: (-len(x['instincts']), -x['avg_confidence']))
819
+
820
+ print(f"\nPotential skill clusters found: {len(skill_candidates)}")
821
+
822
+ if skill_candidates:
823
+ print(f"\n## SKILL CANDIDATES\n")
824
+ for i, cand in enumerate(skill_candidates[:5], 1):
825
+ scope_info = ', '.join(cand['scopes'])
826
+ print(f"{i}. Cluster: \"{cand['trigger']}\"")
827
+ print(f" Instincts: {len(cand['instincts'])}")
828
+ print(f" Avg confidence: {cand['avg_confidence']:.0%}")
829
+ print(f" Domains: {', '.join(cand['domains'])}")
830
+ print(f" Scopes: {scope_info}")
831
+ print(f" Instincts:")
832
+ for inst in cand['instincts'][:3]:
833
+ print(f" - {inst.get('id')} [{inst.get('scope', '?')}]")
834
+ print()
835
+
836
+ # Command candidates (workflow instincts with high confidence)
837
+ workflow_instincts = [i for i in instincts if i.get('domain') == 'workflow' and i.get('confidence', 0) >= 0.7]
838
+ if workflow_instincts:
839
+ print(f"\n## COMMAND CANDIDATES ({len(workflow_instincts)})\n")
840
+ for inst in workflow_instincts[:5]:
841
+ trigger = inst.get('trigger', 'unknown')
842
+ cmd_name = trigger.replace('when ', '').replace('implementing ', '').replace('a ', '')
843
+ cmd_name = cmd_name.replace(' ', '-')[:20]
844
+ print(f" /{cmd_name}")
845
+ print(f" From: {inst.get('id')} [{inst.get('scope', '?')}]")
846
+ print(f" Confidence: {inst.get('confidence', 0.5):.0%}")
847
+ print()
848
+
849
+ # Agent candidates (complex multi-step patterns)
850
+ agent_candidates = [c for c in skill_candidates if len(c['instincts']) >= 3 and c['avg_confidence'] >= 0.75]
851
+ if agent_candidates:
852
+ print(f"\n## AGENT CANDIDATES ({len(agent_candidates)})\n")
853
+ for cand in agent_candidates[:3]:
854
+ agent_name = cand['trigger'].replace(' ', '-')[:20] + '-agent'
855
+ print(f" {agent_name}")
856
+ print(f" Covers {len(cand['instincts'])} instincts")
857
+ print(f" Avg confidence: {cand['avg_confidence']:.0%}")
858
+ print()
859
+
860
+ # Promotion candidates (project instincts that could be global)
861
+ _show_promotion_candidates(project)
862
+
863
+ if args.generate:
864
+ evolved_dir = project["evolved_dir"] if project["id"] != "global" else GLOBAL_EVOLVED_DIR
865
+ generated = _generate_evolved(skill_candidates, workflow_instincts, agent_candidates, evolved_dir)
866
+ if generated:
867
+ print(f"\nGenerated {len(generated)} evolved structures:")
868
+ for path in generated:
869
+ print(f" {path}")
870
+ else:
871
+ print("\nNo structures generated (need higher-confidence clusters).")
872
+
873
+ print(f"\n{'='*60}\n")
874
+ return 0
875
+
876
+
877
+ # ─────────────────────────────────────────────
878
+ # Promote Command
879
+ # ─────────────────────────────────────────────
880
+
881
+ def _find_cross_project_instincts() -> dict:
882
+ """Find instincts that appear in multiple projects (promotion candidates).
883
+
884
+ Returns dict mapping instinct ID → list of (project_id, instinct) tuples.
885
+ """
886
+ registry = load_registry()
887
+ cross_project = defaultdict(list)
888
+
889
+ for pid, pinfo in registry.items():
890
+ project_dir = PROJECTS_DIR / pid
891
+ personal_dir = project_dir / "instincts" / "personal"
892
+ inherited_dir = project_dir / "instincts" / "inherited"
893
+
894
+ # Track instinct IDs already seen for this project to avoid counting
895
+ # the same instinct twice within one project (e.g. in both personal/ and inherited/)
896
+ seen_in_project = set()
897
+ for d, stype in [(personal_dir, "personal"), (inherited_dir, "inherited")]:
898
+ for inst in _load_instincts_from_dir(d, stype, "project"):
899
+ iid = inst.get('id')
900
+ if iid and iid not in seen_in_project:
901
+ seen_in_project.add(iid)
902
+ cross_project[iid].append((pid, pinfo.get('name', pid), inst))
903
+
904
+ # Filter to only those appearing in 2+ unique projects
905
+ return {iid: entries for iid, entries in cross_project.items() if len(entries) >= 2}
906
+
907
+
908
+ def _show_promotion_candidates(project: dict) -> None:
909
+ """Show instincts that could be promoted from project to global."""
910
+ cross = _find_cross_project_instincts()
911
+
912
+ if not cross:
913
+ return
914
+
915
+ # Filter to high-confidence ones not already global
916
+ global_instincts = _load_instincts_from_dir(GLOBAL_PERSONAL_DIR, "personal", "global")
917
+ global_instincts += _load_instincts_from_dir(GLOBAL_INHERITED_DIR, "inherited", "global")
918
+ global_ids = {i.get('id') for i in global_instincts}
919
+
920
+ candidates = []
921
+ for iid, entries in cross.items():
922
+ if iid in global_ids:
923
+ continue
924
+ avg_conf = sum(e[2].get('confidence', 0.5) for e in entries) / len(entries)
925
+ if avg_conf >= PROMOTE_CONFIDENCE_THRESHOLD:
926
+ candidates.append({
927
+ 'id': iid,
928
+ 'projects': [(pid, pname) for pid, pname, _ in entries],
929
+ 'avg_confidence': avg_conf,
930
+ 'sample': entries[0][2],
931
+ })
932
+
933
+ if candidates:
934
+ print(f"\n## PROMOTION CANDIDATES (project -> global)\n")
935
+ print(f" These instincts appear in {PROMOTE_MIN_PROJECTS}+ projects with high confidence:\n")
936
+ for cand in candidates[:10]:
937
+ proj_names = ', '.join(pname for _, pname in cand['projects'])
938
+ print(f" * {cand['id']} (avg: {cand['avg_confidence']:.0%})")
939
+ print(f" Found in: {proj_names}")
940
+ print()
941
+ print(f" Run `instinct-cli.py promote` to promote these to global scope.\n")
942
+
943
+
944
+ def cmd_promote(args) -> int:
945
+ """Promote project-scoped instincts to global scope."""
946
+ project = detect_project()
947
+
948
+ if args.instinct_id:
949
+ # Promote a specific instinct
950
+ return _promote_specific(project, args.instinct_id, args.force, args.dry_run)
951
+ else:
952
+ # Auto-detect promotion candidates
953
+ return _promote_auto(project, args.force, args.dry_run)
954
+
955
+
956
+ def _promote_specific(project: dict, instinct_id: str, force: bool, dry_run: bool = False) -> int:
957
+ """Promote a specific instinct by ID from current project to global."""
958
+ if not _validate_instinct_id(instinct_id):
959
+ print(f"Invalid instinct ID: '{instinct_id}'.", file=sys.stderr)
960
+ return 1
961
+
962
+ project_instincts = load_project_only_instincts(project)
963
+ target = next((i for i in project_instincts if i.get('id') == instinct_id), None)
964
+
965
+ if not target:
966
+ print(f"Instinct '{instinct_id}' not found in project {project['name']}.")
967
+ return 1
968
+
969
+ # Check if already global
970
+ global_instincts = _load_instincts_from_dir(GLOBAL_PERSONAL_DIR, "personal", "global")
971
+ global_instincts += _load_instincts_from_dir(GLOBAL_INHERITED_DIR, "inherited", "global")
972
+ if any(i.get('id') == instinct_id for i in global_instincts):
973
+ print(f"Instinct '{instinct_id}' already exists in global scope.")
974
+ return 1
975
+
976
+ print(f"\nPromoting: {instinct_id}")
977
+ print(f" From: project '{project['name']}'")
978
+ print(f" Confidence: {target.get('confidence', 0.5):.0%}")
979
+ print(f" Domain: {target.get('domain', 'general')}")
980
+
981
+ if dry_run:
982
+ print("\n[DRY RUN] No changes made.")
983
+ return 0
984
+
985
+ if not force:
986
+ response = input(f"\nPromote to global? [y/N] ")
987
+ if response.lower() != 'y':
988
+ print("Cancelled.")
989
+ return 0
990
+
991
+ # Write to global personal directory
992
+ output_file = GLOBAL_PERSONAL_DIR / f"{instinct_id}.yaml"
993
+ output_content = "---\n"
994
+ output_content += f"id: {target.get('id')}\n"
995
+ output_content += f"trigger: {_yaml_quote(target.get('trigger', 'unknown'))}\n"
996
+ output_content += f"confidence: {target.get('confidence', 0.5)}\n"
997
+ output_content += f"domain: {target.get('domain', 'general')}\n"
998
+ output_content += f"source: {target.get('source', 'promoted')}\n"
999
+ output_content += f"scope: global\n"
1000
+ output_content += f"promoted_from: {project['id']}\n"
1001
+ output_content += f"promoted_date: {datetime.now(timezone.utc).isoformat().replace('+00:00', 'Z')}\n"
1002
+ output_content += "---\n\n"
1003
+ output_content += target.get('content', '') + "\n"
1004
+
1005
+ output_file.write_text(output_content, encoding="utf-8")
1006
+ print(f"\nPromoted '{instinct_id}' to global scope.")
1007
+ print(f" Saved to: {output_file}")
1008
+ return 0
1009
+
1010
+
1011
+ def _promote_auto(project: dict, force: bool, dry_run: bool) -> int:
1012
+ """Auto-promote instincts found in multiple projects."""
1013
+ cross = _find_cross_project_instincts()
1014
+
1015
+ global_instincts = _load_instincts_from_dir(GLOBAL_PERSONAL_DIR, "personal", "global")
1016
+ global_instincts += _load_instincts_from_dir(GLOBAL_INHERITED_DIR, "inherited", "global")
1017
+ global_ids = {i.get('id') for i in global_instincts}
1018
+
1019
+ candidates = []
1020
+ for iid, entries in cross.items():
1021
+ if iid in global_ids:
1022
+ continue
1023
+ avg_conf = sum(e[2].get('confidence', 0.5) for e in entries) / len(entries)
1024
+ if avg_conf >= PROMOTE_CONFIDENCE_THRESHOLD and len(entries) >= PROMOTE_MIN_PROJECTS:
1025
+ candidates.append({
1026
+ 'id': iid,
1027
+ 'entries': entries,
1028
+ 'avg_confidence': avg_conf,
1029
+ })
1030
+
1031
+ if not candidates:
1032
+ print("No instincts qualify for auto-promotion.")
1033
+ print(f" Criteria: appears in {PROMOTE_MIN_PROJECTS}+ projects, avg confidence >= {PROMOTE_CONFIDENCE_THRESHOLD:.0%}")
1034
+ return 0
1035
+
1036
+ print(f"\n{'='*60}")
1037
+ print(f" AUTO-PROMOTION CANDIDATES - {len(candidates)} found")
1038
+ print(f"{'='*60}\n")
1039
+
1040
+ for cand in candidates:
1041
+ proj_names = ', '.join(pname for _, pname, _ in cand['entries'])
1042
+ print(f" {cand['id']} (avg: {cand['avg_confidence']:.0%})")
1043
+ print(f" Found in {len(cand['entries'])} projects: {proj_names}")
1044
+
1045
+ if dry_run:
1046
+ print(f"\n[DRY RUN] No changes made.")
1047
+ return 0
1048
+
1049
+ if not force:
1050
+ response = input(f"\nPromote {len(candidates)} instincts to global? [y/N] ")
1051
+ if response.lower() != 'y':
1052
+ print("Cancelled.")
1053
+ return 0
1054
+
1055
+ promoted = 0
1056
+ for cand in candidates:
1057
+ if not _validate_instinct_id(cand['id']):
1058
+ print(f"Skipping invalid instinct ID during promotion: {cand['id']}", file=sys.stderr)
1059
+ continue
1060
+
1061
+ # Use the highest-confidence version
1062
+ best_entry = max(cand['entries'], key=lambda e: e[2].get('confidence', 0.5))
1063
+ inst = best_entry[2]
1064
+
1065
+ output_file = GLOBAL_PERSONAL_DIR / f"{cand['id']}.yaml"
1066
+ output_content = "---\n"
1067
+ output_content += f"id: {inst.get('id')}\n"
1068
+ output_content += f"trigger: {_yaml_quote(inst.get('trigger', 'unknown'))}\n"
1069
+ output_content += f"confidence: {cand['avg_confidence']}\n"
1070
+ output_content += f"domain: {inst.get('domain', 'general')}\n"
1071
+ output_content += f"source: auto-promoted\n"
1072
+ output_content += f"scope: global\n"
1073
+ output_content += f"promoted_date: {datetime.now(timezone.utc).isoformat().replace('+00:00', 'Z')}\n"
1074
+ output_content += f"seen_in_projects: {len(cand['entries'])}\n"
1075
+ output_content += "---\n\n"
1076
+ output_content += inst.get('content', '') + "\n"
1077
+
1078
+ output_file.write_text(output_content, encoding="utf-8")
1079
+ promoted += 1
1080
+
1081
+ print(f"\nPromoted {promoted} instincts to global scope.")
1082
+ return 0
1083
+
1084
+
1085
+ # ─────────────────────────────────────────────
1086
+ # Projects Command
1087
+ # ─────────────────────────────────────────────
1088
+
1089
+ def cmd_projects(args) -> int:
1090
+ """List all known projects and their instinct counts."""
1091
+ registry = load_registry()
1092
+
1093
+ if not registry:
1094
+ print("No projects registered yet.")
1095
+ print("Projects are auto-detected when you use Claude Code in a git repo.")
1096
+ return 0
1097
+
1098
+ print(f"\n{'='*60}")
1099
+ print(f" KNOWN PROJECTS - {len(registry)} total")
1100
+ print(f"{'='*60}\n")
1101
+
1102
+ for pid, pinfo in sorted(registry.items(), key=lambda x: x[1].get('last_seen', ''), reverse=True):
1103
+ project_dir = PROJECTS_DIR / pid
1104
+ personal_dir = project_dir / "instincts" / "personal"
1105
+ inherited_dir = project_dir / "instincts" / "inherited"
1106
+
1107
+ personal_count = len(_load_instincts_from_dir(personal_dir, "personal", "project"))
1108
+ inherited_count = len(_load_instincts_from_dir(inherited_dir, "inherited", "project"))
1109
+ obs_file = project_dir / "observations.jsonl"
1110
+ if obs_file.exists():
1111
+ with open(obs_file, encoding="utf-8") as f:
1112
+ obs_count = sum(1 for _ in f)
1113
+ else:
1114
+ obs_count = 0
1115
+
1116
+ print(f" {pinfo.get('name', pid)} [{pid}]")
1117
+ print(f" Root: {pinfo.get('root', 'unknown')}")
1118
+ if pinfo.get('remote'):
1119
+ print(f" Remote: {pinfo['remote']}")
1120
+ print(f" Instincts: {personal_count} personal, {inherited_count} inherited")
1121
+ print(f" Observations: {obs_count} events")
1122
+ print(f" Last seen: {pinfo.get('last_seen', 'unknown')}")
1123
+ print()
1124
+
1125
+ # Global stats
1126
+ global_personal = len(_load_instincts_from_dir(GLOBAL_PERSONAL_DIR, "personal", "global"))
1127
+ global_inherited = len(_load_instincts_from_dir(GLOBAL_INHERITED_DIR, "inherited", "global"))
1128
+ print(f" GLOBAL")
1129
+ print(f" Instincts: {global_personal} personal, {global_inherited} inherited")
1130
+
1131
+ print(f"\n{'='*60}\n")
1132
+ return 0
1133
+
1134
+
1135
+ # ─────────────────────────────────────────────
1136
+ # Generate Evolved Structures
1137
+ # ─────────────────────────────────────────────
1138
+
1139
+ def _generate_evolved(skill_candidates: list, workflow_instincts: list, agent_candidates: list, evolved_dir: Path) -> list[str]:
1140
+ """Generate skill/command/agent files from analyzed instinct clusters."""
1141
+ generated = []
1142
+
1143
+ # Generate skills from top candidates
1144
+ for cand in skill_candidates[:5]:
1145
+ trigger = cand['trigger'].strip()
1146
+ if not trigger:
1147
+ continue
1148
+ name = re.sub(r'[^a-z0-9]+', '-', trigger.lower()).strip('-')[:30]
1149
+ if not name:
1150
+ continue
1151
+
1152
+ skill_dir = evolved_dir / "skills" / name
1153
+ skill_dir.mkdir(parents=True, exist_ok=True)
1154
+
1155
+ content = f"# {name}\n\n"
1156
+ content += f"Evolved from {len(cand['instincts'])} instincts "
1157
+ content += f"(avg confidence: {cand['avg_confidence']:.0%})\n\n"
1158
+ content += f"## When to Apply\n\n"
1159
+ content += f"Trigger: {trigger}\n\n"
1160
+ content += f"## Actions\n\n"
1161
+ for inst in cand['instincts']:
1162
+ inst_content = inst.get('content', '')
1163
+ action_match = re.search(r'## Action\s*\n\s*(.+?)(?:\n\n|\n##|$)', inst_content, re.DOTALL)
1164
+ action = action_match.group(1).strip() if action_match else inst.get('id', 'unnamed')
1165
+ content += f"- {action}\n"
1166
+
1167
+ (skill_dir / "SKILL.md").write_text(content, encoding="utf-8")
1168
+ generated.append(str(skill_dir / "SKILL.md"))
1169
+
1170
+ # Generate commands from workflow instincts
1171
+ for inst in workflow_instincts[:5]:
1172
+ trigger = inst.get('trigger', 'unknown')
1173
+ cmd_name = re.sub(r'[^a-z0-9]+', '-', trigger.lower().replace('when ', '').replace('implementing ', ''))
1174
+ cmd_name = cmd_name.strip('-')[:20]
1175
+ if not cmd_name:
1176
+ continue
1177
+
1178
+ cmd_file = evolved_dir / "commands" / f"{cmd_name}.md"
1179
+ content = f"# {cmd_name}\n\n"
1180
+ content += f"Evolved from instinct: {inst.get('id', 'unnamed')}\n"
1181
+ content += f"Confidence: {inst.get('confidence', 0.5):.0%}\n\n"
1182
+ content += inst.get('content', '')
1183
+
1184
+ cmd_file.write_text(content, encoding="utf-8")
1185
+ generated.append(str(cmd_file))
1186
+
1187
+ # Generate agents from complex clusters
1188
+ for cand in agent_candidates[:3]:
1189
+ trigger = cand['trigger'].strip()
1190
+ agent_name = re.sub(r'[^a-z0-9]+', '-', trigger.lower()).strip('-')[:20]
1191
+ if not agent_name:
1192
+ continue
1193
+
1194
+ agent_file = evolved_dir / "agents" / f"{agent_name}.md"
1195
+ domains = ', '.join(cand['domains'])
1196
+ instinct_ids = [i.get('id', 'unnamed') for i in cand['instincts']]
1197
+
1198
+ content = f"---\nmodel: sonnet\ntools: Read, Grep, Glob\n---\n"
1199
+ content += f"# {agent_name}\n\n"
1200
+ content += f"Evolved from {len(cand['instincts'])} instincts "
1201
+ content += f"(avg confidence: {cand['avg_confidence']:.0%})\n"
1202
+ content += f"Domains: {domains}\n\n"
1203
+ content += f"## Source Instincts\n\n"
1204
+ for iid in instinct_ids:
1205
+ content += f"- {iid}\n"
1206
+
1207
+ agent_file.write_text(content, encoding="utf-8")
1208
+ generated.append(str(agent_file))
1209
+
1210
+ return generated
1211
+
1212
+
1213
+ # ─────────────────────────────────────────────
1214
+ # Pending Instinct Helpers
1215
+ # ─────────────────────────────────────────────
1216
+
1217
+ def _collect_pending_dirs() -> list[Path]:
1218
+ """Return all pending instinct directories (global + per-project)."""
1219
+ dirs = []
1220
+ global_pending = GLOBAL_INSTINCTS_DIR / "pending"
1221
+ if global_pending.is_dir():
1222
+ dirs.append(global_pending)
1223
+ if PROJECTS_DIR.is_dir():
1224
+ for project_dir in sorted(PROJECTS_DIR.iterdir()):
1225
+ if project_dir.is_dir():
1226
+ pending = project_dir / "instincts" / "pending"
1227
+ if pending.is_dir():
1228
+ dirs.append(pending)
1229
+ return dirs
1230
+
1231
+
1232
+ def _parse_created_date(file_path: Path) -> Optional[datetime]:
1233
+ """Parse the 'created' date from YAML frontmatter of an instinct file.
1234
+
1235
+ Falls back to file mtime if no 'created' field is found.
1236
+ """
1237
+ try:
1238
+ content = file_path.read_text(encoding="utf-8")
1239
+ except (OSError, UnicodeDecodeError):
1240
+ return None
1241
+
1242
+ in_frontmatter = False
1243
+ for line in content.split('\n'):
1244
+ stripped = line.strip()
1245
+ if stripped == '---':
1246
+ if in_frontmatter:
1247
+ break # end of frontmatter without finding created
1248
+ in_frontmatter = True
1249
+ continue
1250
+ if in_frontmatter and ':' in line:
1251
+ key, value = line.split(':', 1)
1252
+ if key.strip() == 'created':
1253
+ date_str = value.strip().strip('"').strip("'")
1254
+ for fmt in (
1255
+ "%Y-%m-%dT%H:%M:%S%z",
1256
+ "%Y-%m-%dT%H:%M:%SZ",
1257
+ "%Y-%m-%dT%H:%M:%S",
1258
+ "%Y-%m-%d",
1259
+ ):
1260
+ try:
1261
+ dt = datetime.strptime(date_str, fmt)
1262
+ if dt.tzinfo is None:
1263
+ dt = dt.replace(tzinfo=timezone.utc)
1264
+ return dt
1265
+ except ValueError:
1266
+ continue
1267
+
1268
+ # Fallback: file modification time
1269
+ try:
1270
+ mtime = file_path.stat().st_mtime
1271
+ return datetime.fromtimestamp(mtime, tz=timezone.utc)
1272
+ except OSError:
1273
+ return None
1274
+
1275
+
1276
+ def _collect_pending_instincts() -> list[dict]:
1277
+ """Scan all pending directories and return info about each pending instinct.
1278
+
1279
+ Each dict contains: path, created, age_days, name, parent_dir.
1280
+ """
1281
+ now = datetime.now(timezone.utc)
1282
+ results = []
1283
+ for pending_dir in _collect_pending_dirs():
1284
+ files = [
1285
+ f for f in sorted(pending_dir.iterdir())
1286
+ if f.is_file() and f.suffix.lower() in ALLOWED_INSTINCT_EXTENSIONS
1287
+ ]
1288
+ for file_path in files:
1289
+ created = _parse_created_date(file_path)
1290
+ if created is None:
1291
+ print(f"Warning: could not parse age for pending instinct: {file_path.name}", file=sys.stderr)
1292
+ continue
1293
+ age = now - created
1294
+ results.append({
1295
+ "path": file_path,
1296
+ "created": created,
1297
+ "age_days": age.days,
1298
+ "name": file_path.stem,
1299
+ "parent_dir": str(pending_dir),
1300
+ })
1301
+ return results
1302
+
1303
+
1304
+ # ─────────────────────────────────────────────
1305
+ # Prune Command
1306
+ # ─────────────────────────────────────────────
1307
+
1308
+ def cmd_prune(args) -> int:
1309
+ """Delete pending instincts older than the TTL threshold."""
1310
+ max_age = args.max_age
1311
+ dry_run = args.dry_run
1312
+ quiet = args.quiet
1313
+
1314
+ pending = _collect_pending_instincts()
1315
+
1316
+ expired = [p for p in pending if p["age_days"] >= max_age]
1317
+ remaining = [p for p in pending if p["age_days"] < max_age]
1318
+
1319
+ if dry_run:
1320
+ if not quiet:
1321
+ if expired:
1322
+ print(f"\n[DRY RUN] Would prune {len(expired)} pending instinct(s) older than {max_age} days:\n")
1323
+ for item in expired:
1324
+ print(f" - {item['name']} (age: {item['age_days']}d) — {item['path']}")
1325
+ else:
1326
+ print(f"No pending instincts older than {max_age} days.")
1327
+ print(f"\nSummary: {len(expired)} would be pruned, {len(remaining)} remaining")
1328
+ return 0
1329
+
1330
+ pruned = 0
1331
+ pruned_items = []
1332
+ for item in expired:
1333
+ try:
1334
+ item["path"].unlink()
1335
+ pruned += 1
1336
+ pruned_items.append(item)
1337
+ except OSError as e:
1338
+ if not quiet:
1339
+ print(f"Warning: Failed to delete {item['path']}: {e}", file=sys.stderr)
1340
+
1341
+ if not quiet:
1342
+ if pruned > 0:
1343
+ print(f"\nPruned {pruned} pending instinct(s) older than {max_age} days.")
1344
+ for item in pruned_items:
1345
+ print(f" - {item['name']} (age: {item['age_days']}d)")
1346
+ else:
1347
+ print(f"No pending instincts older than {max_age} days.")
1348
+ failed = len(expired) - pruned
1349
+ remaining_total = len(remaining) + failed
1350
+ print(f"\nSummary: {pruned} pruned, {remaining_total} remaining")
1351
+
1352
+ return 0
1353
+
1354
+
1355
+ # ─────────────────────────────────────────────
1356
+ # Main
1357
+ # ─────────────────────────────────────────────
1358
+
1359
+ def main() -> int:
1360
+ _ensure_global_dirs()
1361
+ parser = argparse.ArgumentParser(description='Instinct CLI for Continuous Learning v2.1 (Project-Scoped)')
1362
+ subparsers = parser.add_subparsers(dest='command', help='Available commands')
1363
+
1364
+ # Status
1365
+ status_parser = subparsers.add_parser('status', help='Show instinct status (project + global)')
1366
+
1367
+ # Import
1368
+ import_parser = subparsers.add_parser('import', help='Import instincts')
1369
+ import_parser.add_argument('source', help='File path or URL')
1370
+ import_parser.add_argument('--dry-run', action='store_true', help='Preview without importing')
1371
+ import_parser.add_argument('--force', action='store_true', help='Skip confirmation')
1372
+ import_parser.add_argument('--min-confidence', type=float, help='Minimum confidence threshold')
1373
+ import_parser.add_argument('--scope', choices=['project', 'global'], default='project',
1374
+ help='Import scope (default: project)')
1375
+
1376
+ # Export
1377
+ export_parser = subparsers.add_parser('export', help='Export instincts')
1378
+ export_parser.add_argument('--output', '-o', help='Output file')
1379
+ export_parser.add_argument('--domain', help='Filter by domain')
1380
+ export_parser.add_argument('--min-confidence', type=float, help='Minimum confidence')
1381
+ export_parser.add_argument('--scope', choices=['project', 'global', 'all'], default='all',
1382
+ help='Export scope (default: all)')
1383
+
1384
+ # Evolve
1385
+ evolve_parser = subparsers.add_parser('evolve', help='Analyze and evolve instincts')
1386
+ evolve_parser.add_argument('--generate', action='store_true', help='Generate evolved structures')
1387
+
1388
+ # Promote (new in v2.1)
1389
+ promote_parser = subparsers.add_parser('promote', help='Promote project instincts to global scope')
1390
+ promote_parser.add_argument('instinct_id', nargs='?', help='Specific instinct ID to promote')
1391
+ promote_parser.add_argument('--force', action='store_true', help='Skip confirmation')
1392
+ promote_parser.add_argument('--dry-run', action='store_true', help='Preview without promoting')
1393
+
1394
+ # Projects (new in v2.1)
1395
+ projects_parser = subparsers.add_parser('projects', help='List known projects and instinct counts')
1396
+
1397
+ # Prune (pending instinct TTL)
1398
+ prune_parser = subparsers.add_parser('prune', help='Delete pending instincts older than TTL')
1399
+ prune_parser.add_argument('--max-age', type=int, default=PENDING_TTL_DAYS,
1400
+ help=f'Max age in days before pruning (default: {PENDING_TTL_DAYS})')
1401
+ prune_parser.add_argument('--dry-run', action='store_true', help='Preview without deleting')
1402
+ prune_parser.add_argument('--quiet', action='store_true', help='Suppress output (for automated use)')
1403
+
1404
+ args = parser.parse_args()
1405
+
1406
+ if args.command == 'status':
1407
+ return cmd_status(args)
1408
+ elif args.command == 'import':
1409
+ return cmd_import(args)
1410
+ elif args.command == 'export':
1411
+ return cmd_export(args)
1412
+ elif args.command == 'evolve':
1413
+ return cmd_evolve(args)
1414
+ elif args.command == 'promote':
1415
+ return cmd_promote(args)
1416
+ elif args.command == 'projects':
1417
+ return cmd_projects(args)
1418
+ elif args.command == 'prune':
1419
+ return cmd_prune(args)
1420
+ else:
1421
+ parser.print_help()
1422
+ return 1
1423
+
1424
+
1425
+ if __name__ == '__main__':
1426
+ sys.exit(main())