@gsep/core 0.8.0

package/dist/evolution/boost/operators/CrossoverMutationOperator.js

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+import { generateText } from '../utils/llmHelper.js';
+import { estimateTokenCount } from '../../../utils/tokens.js';
+export class CrossoverMutationOperator {
+    llm;
+    name = 'crossover_mutation';
+    description = 'Intra-genome crossover: fuse successful gene techniques into struggling genes';
+    targetChromosome = 'c1';
+    constructor(llm) {
+        this.llm = llm;
+    }
+    async mutate(context) {
+        const mutant = this.deepClone(context.genome);
+        const allGenes = mutant.chromosomes.c1.operations;
+        const targetGene = context.targetGene
+            ?? this.findWeakestGene(allGenes);
+        if (!targetGene) {
+            return this.createFailure(context, 'No target gene for crossover');
+        }
+        const geneIndex = allGenes.findIndex(g => g.id === targetGene.id || g.category === targetGene.category);
+        if (geneIndex === -1) {
+            return this.createFailure(context, `Gene ${targetGene.category} not found`);
+        }
+        const donors = this.findDonorGenes(allGenes, targetGene);
+        if (donors.length === 0) {
+            return this.createFailure(context, 'No higher-fitness donor genes available for crossover');
+        }
+        let fusedContent;
+        if (this.llm) {
+            fusedContent = await this.llmFusion(targetGene, donors, context);
+        }
+        else {
+            fusedContent = this.mechanicalFusion(targetGene, donors);
+        }
+        mutant.chromosomes.c1.operations[geneIndex] = {
+            ...targetGene,
+            content: fusedContent,
+            tokenCount: estimateTokenCount(fusedContent),
+            version: (targetGene.version ?? 0) + 1,
+            lastModified: new Date(),
+            origin: 'mutation',
+            mutationHistory: [
+                ...(targetGene.mutationHistory || []),
+                {
+                    operation: this.name,
+                    timestamp: new Date(),
+                    reason: `Crossover from ${donors.length} donor genes: ${donors.map(d => d.category).join(', ')}`,
+                },
+            ],
+        };
+        const mutation = {
+            id: this.generateId(),
+            timestamp: new Date(),
+            chromosome: 'c1',
+            operation: this.name,
+            before: targetGene.content,
+            after: fusedContent,
+            diff: `Crossover: fused ${donors.length} donors into ${targetGene.category}`,
+            trigger: 'drift-detected',
+            reason: context.reason,
+            sandboxTested: false,
+            promoted: false,
+            proposer: 'system',
+        };
+        return {
+            success: true,
+            mutant,
+            mutation,
+            description: `Fused techniques from ${donors.length} high-fitness genes into ${targetGene.category}`,
+            expectedImprovement: this.estimateImprovement(context),
+        };
+    }
+    estimateImprovement(context) {
+        const allGenes = context.genome.chromosomes.c1.operations;
+        const target = context.targetGene ?? this.findWeakestGene(allGenes);
+        if (!target || allGenes.length < 2)
+            return 0.02;
+        const donors = this.findDonorGenes(allGenes, target);
+        if (donors.length === 0)
+            return 0.02;
+        const targetFitness = target.fitness?.quality ?? target.successRate ?? 0.5;
+        const avgDonorFitness = donors.reduce((sum, d) => sum + (d.fitness?.quality ?? d.successRate ?? 0.5), 0) / donors.length;
+        const gap = avgDonorFitness - targetFitness;
+        return Math.min(0.35, Math.max(0.05, gap * 0.5));
+    }
+    findWeakestGene(genes) {
+        if (genes.length === 0)
+            return undefined;
+        return genes.reduce((weakest, gene) => {
+            const weakestFitness = weakest.fitness?.quality ?? weakest.successRate ?? 0.5;
+            const geneFitness = gene.fitness?.quality ?? gene.successRate ?? 0.5;
+            return geneFitness < weakestFitness ? gene : weakest;
+        });
+    }
+    findDonorGenes(allGenes, target) {
+        const targetFitness = target.fitness?.quality ?? target.successRate ?? 0.5;
+        return allGenes
+            .filter(g => g.id !== target.id && g.category !== target.category)
+            .filter(g => {
+            const fitness = g.fitness?.quality ?? g.successRate ?? 0.5;
+            return fitness > targetFitness;
+        })
+            .sort((a, b) => {
+            const fitnessA = a.fitness?.quality ?? a.successRate ?? 0.5;
+            const fitnessB = b.fitness?.quality ?? b.successRate ?? 0.5;
+            return fitnessB - fitnessA;
+        })
+            .slice(0, 3);
+    }
+    async llmFusion(target, donors, context) {
+        const donorsText = donors.map((d, i) => {
+            const fitness = d.fitness?.quality ?? d.successRate ?? 0.5;
+            return `Donor ${i + 1} (${d.category}, fitness: ${(fitness * 100).toFixed(0)}%):
+\`\`\`
+${d.content}
+\`\`\``;
+        }).join('\n\n');
+        const targetFitness = target.fitness?.quality ?? target.successRate ?? 0.5;
+        const capabilities = (context.evidence?.capabilities ?? []);
+        const capText = capabilities.length > 0
+            ? `\nDECLINING CAPABILITIES:\n${capabilities.slice(0, 5).map(c => `- ${c.taskType} × ${c.gene}: ${(c.performanceScore * 100).toFixed(0)}%`).join('\n')}`
+            : '';
+        const prompt = `You are an expert AI agent prompt engineer performing GENETIC CROSSOVER.
+
+TARGET GENE (struggling, needs improvement):
+Category: ${target.category}
+Fitness: ${(targetFitness * 100).toFixed(0)}%
+\`\`\`
+${target.content}
+\`\`\`
+
+HIGH-PERFORMING DONOR GENES (from the same agent):
+${donorsText}
+${capText}
+
+TASK: Cross-pollinate the target gene with successful techniques from the donors.
+
+GUIDELINES:
+1. IDENTIFY what makes each donor gene successful (clarity, structure, specificity, etc.)
+2. TRANSFER those successful techniques to the target gene
+3. ADAPT the techniques to fit the target gene's category (${target.category})
+4. PRESERVE the target gene's core purpose
+5. Don't copy donor content verbatim — extract and adapt the underlying patterns
+
+Return ONLY the improved gene content. No explanations.
+
+IMPROVED ${target.category.toUpperCase()} GENE:`;
+        try {
+            const response = await generateText(this.llm, {
+                prompt,
+                temperature: 0.6,
+                maxTokens: 1500,
+            });
+            return response.content.trim();
+        }
+        catch {
+            return this.mechanicalFusion(target, donors);
+        }
+    }
+    mechanicalFusion(target, donors) {
+        const targetSentences = target.content.split(/[.!?]\s+/).filter(s => s.length > 10);
+        const donorSentences = [];
+        for (const donor of donors) {
+            const sentences = donor.content.split(/[.!?]\s+/).filter(s => s.length > 10);
+            for (const s of sentences) {
+                const isDuplicate = targetSentences.some(ts => this.jaccard(ts, s) > 0.6);
+                if (!isDuplicate && donorSentences.length < 3) {
+                    donorSentences.push(s);
+                }
+            }
+        }
+        return [...targetSentences, ...donorSentences].join('. ') + '.';
+    }
+    jaccard(s1, s2) {
+        const w1 = new Set(s1.toLowerCase().split(/\s+/));
+        const w2 = new Set(s2.toLowerCase().split(/\s+/));
+        const intersection = new Set([...w1].filter(w => w2.has(w)));
+        const union = new Set([...w1, ...w2]);
+        return union.size > 0 ? intersection.size / union.size : 0;
+    }
+    createFailure(context, reason) {
+        return {
+            success: false,
+            mutant: context.genome,
+            mutation: {
+                id: this.generateId(),
+                timestamp: new Date(),
+                chromosome: 'c1',
+                operation: this.name,
+                before: '', after: '', diff: '',
+                trigger: 'drift-detected',
+                reason,
+                sandboxTested: false,
+                promoted: false,
+                proposer: 'system',
+            },
+            description: reason,
+            expectedImprovement: 0,
+        };
+    }
+    deepClone(genome) {
+        return JSON.parse(JSON.stringify(genome));
+    }
+    generateId() {
+        return `mut_crossover_${Date.now()}_${Math.random().toString(36).substring(7)}`;
+    }
+}
+//# sourceMappingURL=CrossoverMutationOperator.js.map

package/dist/evolution/boost/operators/CrossoverMutationOperator.js.map

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package/dist/evolution/boost/operators/PatternExtractionOperator.d.ts

@@ -0,0 +1,21 @@
+import type { MutationType } from '../../../types/GenomeV2.js';
+import type { IMutationOperator, MutationContext, MutationResult } from '../../MutationOperator.js';
+import type { LLMAdapter } from '../../../interfaces/LLMAdapter.js';
+import type { GeneBank } from '../../../gene-bank/GeneBank.js';
+export declare class PatternExtractionOperator implements IMutationOperator {
+    private llm;
+    private geneBank?;
+    name: MutationType;
+    description: string;
+    targetChromosome: 'c1';
+    constructor(llm: LLMAdapter, geneBank?: GeneBank | undefined);
+    mutate(context: MutationContext): Promise<MutationResult>;
+    estimateImprovement(context: MutationContext): number;
+    private extractFromPatterns;
+    private extractFromGeneBank;
+    private categoryToType;
+    private createFailure;
+    private deepClone;
+    private generateId;
+}
+//# sourceMappingURL=PatternExtractionOperator.d.ts.map

package/dist/evolution/boost/operators/PatternExtractionOperator.d.ts.map

@@ -0,0 +1 @@
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package/dist/evolution/boost/operators/PatternExtractionOperator.js

@@ -0,0 +1,215 @@
+import { generateText } from '../utils/llmHelper.js';
+import { estimateTokenCount } from '../../../utils/tokens.js';
+export class PatternExtractionOperator {
+    llm;
+    geneBank;
+    name = 'pattern_extraction';
+    description = 'Crystallize learned behavioral patterns into gene content';
+    targetChromosome = 'c1';
+    constructor(llm, geneBank) {
+        this.llm = llm;
+        this.geneBank = geneBank;
+    }
+    async mutate(context) {
+        const evidence = context.evidence ?? {};
+        const patterns = (evidence.patterns ?? []);
+        const predictions = (evidence.predictions ?? []);
+        if (patterns.length === 0 && !this.geneBank) {
+            return this.createFailure(context, 'No behavioral patterns available and no GeneBank fallback');
+        }
+        const mutant = this.deepClone(context.genome);
+        const targetGene = context.targetGene
+            ?? mutant.chromosomes.c1.operations[0];
+        if (!targetGene) {
+            return this.createFailure(context, 'No target gene found for pattern extraction');
+        }
+        const geneIndex = mutant.chromosomes.c1.operations.findIndex(g => g.id === targetGene.id || g.category === targetGene.category);
+        if (geneIndex === -1) {
+            return this.createFailure(context, `Gene ${targetGene.category} not found`);
+        }
+        let enhancedContent;
+        if (patterns.length > 0) {
+            enhancedContent = await this.extractFromPatterns(targetGene, patterns, predictions, context);
+        }
+        else if (this.geneBank) {
+            enhancedContent = await this.extractFromGeneBank(targetGene, context);
+        }
+        else {
+            return this.createFailure(context, 'No patterns or GeneBank available');
+        }
+        mutant.chromosomes.c1.operations[geneIndex] = {
+            ...targetGene,
+            content: enhancedContent,
+            tokenCount: estimateTokenCount(enhancedContent),
+            version: (targetGene.version ?? 0) + 1,
+            lastModified: new Date(),
+            origin: 'mutation',
+            mutationHistory: [
+                ...(targetGene.mutationHistory || []),
+                {
+                    operation: this.name,
+                    timestamp: new Date(),
+                    reason: `Extracted ${patterns.length} behavioral patterns`,
+                },
+            ],
+        };
+        const mutation = {
+            id: this.generateId(),
+            timestamp: new Date(),
+            chromosome: 'c1',
+            operation: this.name,
+            before: targetGene.content,
+            after: enhancedContent,
+            diff: `Pattern extraction: ${patterns.length} patterns crystallized into ${targetGene.category}`,
+            trigger: 'drift-detected',
+            reason: context.reason,
+            sandboxTested: false,
+            promoted: false,
+            proposer: 'system',
+        };
+        return {
+            success: true,
+            mutant,
+            mutation,
+            description: `Crystallized ${patterns.length} behavioral patterns into ${targetGene.category}`,
+            expectedImprovement: this.estimateImprovement(context),
+        };
+    }
+    estimateImprovement(context) {
+        const evidence = context.evidence ?? {};
+        const patterns = (evidence.patterns ?? []);
+        if (patterns.length === 0) {
+            return this.geneBank ? 0.08 : 0.02;
+        }
+        const avgConfidence = patterns.reduce((sum, p) => sum + p.confidence, 0) / patterns.length;
+        const patternBonus = Math.min(patterns.length * 0.04, 0.20);
+        const confidenceBonus = avgConfidence * 0.15;
+        return Math.min(0.40, 0.05 + patternBonus + confidenceBonus);
+    }
+    async extractFromPatterns(gene, patterns, predictions, context) {
+        const patternsText = patterns.map((p, i) => {
+            let text = `${i + 1}. [${p.type}] ${p.description} (confidence: ${(p.confidence * 100).toFixed(0)}%, seen ${p.frequency}x)`;
+            if (p.prediction)
+                text += `\n   → Prediction: ${p.prediction}`;
+            return text;
+        }).join('\n');
+        const predictionsText = predictions.length > 0
+            ? predictions.map(p => `- ${p.prediction} (${(p.confidence * 100).toFixed(0)}% confidence)`).join('\n')
+            : 'None available';
+        const purpose = context.evidence?.purpose ?? 'general-purpose AI assistant';
+        const prompt = `You are an expert AI agent prompt engineer. Your task is to ENHANCE an agent instruction by incorporating learned behavioral patterns from real user interactions.
+
+CURRENT INSTRUCTION (category: ${gene.category}):
+\`\`\`
+${gene.content}
+\`\`\`
+
+LEARNED BEHAVIORAL PATTERNS (from real interactions):
+${patternsText}
+
+NEXT-ACTION PREDICTIONS:
+${predictionsText}
+
+AGENT PURPOSE: ${purpose}
+
+TASK: Rewrite the instruction to incorporate these learned patterns. The enhanced instruction should:
+
+1. CODIFY successful patterns as explicit strategies (e.g., "When users ask for X, always include Y")
+2. ADD proactive behaviors based on predictions (e.g., "Anticipate follow-up questions about Z")
+3. INCLUDE error-recovery strategies from learned error patterns
+4. OPTIMIZE tool usage based on tool-preference patterns
+5. PRESERVE the core functionality of the original instruction
+6. Keep the instruction focused on category: ${gene.category}
+
+Return ONLY the enhanced instruction content. No explanations.
+
+ENHANCED INSTRUCTION:`;
+        try {
+            const response = await generateText(this.llm, {
+                prompt,
+                temperature: 0.4,
+                maxTokens: 1500,
+            });
+            return response.content.trim();
+        }
+        catch {
+            return gene.content;
+        }
+    }
+    async extractFromGeneBank(gene, _context) {
+        if (!this.geneBank)
+            return gene.content;
+        try {
+            const candidates = await this.geneBank.searchGenes({
+                type: [this.categoryToType(gene.category)],
+                minFitness: 0.75,
+                sortBy: 'fitness',
+                sortOrder: 'desc',
+                limit: 3,
+            });
+            if (candidates.length === 0)
+                return gene.content;
+            const patternsText = candidates.map((c, i) => `${i + 1}. (fitness: ${(c.fitness.overallFitness * 100).toFixed(0)}%): ${c.content.instruction}`).join('\n\n');
+            const prompt = `You are an expert AI agent prompt engineer. Enhance this instruction by integrating techniques from high-performing agents.
+
+CURRENT INSTRUCTION (${gene.category}):
+\`\`\`
+${gene.content}
+\`\`\`
+
+HIGH-PERFORMING PATTERNS FROM OTHER AGENTS:
+${patternsText}
+
+Rewrite the instruction to incorporate the best techniques. Return ONLY the enhanced content.
+
+ENHANCED INSTRUCTION:`;
+            const response = await generateText(this.llm, {
+                prompt,
+                temperature: 0.4,
+                maxTokens: 1500,
+            });
+            return response.content.trim();
+        }
+        catch {
+            return gene.content;
+        }
+    }
+    categoryToType(category) {
+        const mapping = {
+            'tool-usage': 'tool-usage-pattern',
+            'coding-patterns': 'reasoning-pattern',
+            'reasoning': 'reasoning-pattern',
+            'communication': 'communication-pattern',
+            'error-handling': 'error-recovery-pattern',
+            'data-processing': 'performance-optimization',
+        };
+        return mapping[category] || 'reasoning-pattern';
+    }
+    createFailure(context, reason) {
+        return {
+            success: false,
+            mutant: context.genome,
+            mutation: {
+                id: this.generateId(),
+                timestamp: new Date(),
+                chromosome: 'c1',
+                operation: this.name,
+                before: '', after: '', diff: '',
+                trigger: 'drift-detected',
+                reason,
+                sandboxTested: false,
+                promoted: false,
+                proposer: 'system',
+            },
+            description: reason,
+            expectedImprovement: 0,
+        };
+    }
+    deepClone(genome) {
+        return JSON.parse(JSON.stringify(genome));
+    }
+    generateId() {
+        return `mut_pattern_${Date.now()}_${Math.random().toString(36).substring(7)}`;
+    }
+}
+//# sourceMappingURL=PatternExtractionOperator.js.map

package/dist/evolution/boost/operators/PatternExtractionOperator.js.map

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package/dist/evolution/boost/operators/SemanticRestructuringOperator.d.ts

@@ -0,0 +1,18 @@
+import type { MutationType } from '../../../types/GenomeV2.js';
+import type { IMutationOperator, MutationContext, MutationResult } from '../../MutationOperator.js';
+import type { LLMAdapter } from '../../../interfaces/LLMAdapter.js';
+export declare class SemanticRestructuringOperator implements IMutationOperator {
+    private llm;
+    name: MutationType;
+    description: string;
+    targetChromosome: 'c1';
+    constructor(llm: LLMAdapter);
+    mutate(context: MutationContext): Promise<MutationResult>;
+    estimateImprovement(context: MutationContext): number;
+    private buildIntelligentPrompt;
+    private performSimpleRestructuring;
+    private createFailure;
+    private deepClone;
+    private generateId;
+}
+//# sourceMappingURL=SemanticRestructuringOperator.d.ts.map

package/dist/evolution/boost/operators/SemanticRestructuringOperator.d.ts.map

@@ -0,0 +1 @@
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