@complat/react-spectra-editor 1.0.0-rc2 → 1.0.0-rc20.patch-1

package/dist/helpers/format_bk.js

@@ -1,497 +0,0 @@
-"use strict";
-
-var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
-Object.defineProperty(exports, "__esModule", {
-  value: true
-});
-exports.default = void 0;
-var _toConsumableArray2 = _interopRequireDefault(require("@babel/runtime/helpers/toConsumableArray"));
-var _defineProperty2 = _interopRequireDefault(require("@babel/runtime/helpers/defineProperty"));
-var _converter = require("./converter");
-var _list_layout = require("../constants/list_layout");
-var _multiplicity_calc = require("./multiplicity_calc");
-var _spectraOps;
-var spectraDigit = function spectraDigit(layout) {
-  switch (layout) {
-    case _list_layout.LIST_LAYOUT.IR:
-    case _list_layout.LIST_LAYOUT.RAMAN:
-    case _list_layout.LIST_LAYOUT.UVVIS:
-    case _list_layout.LIST_LAYOUT.HPLC_UVVIS:
-    case _list_layout.LIST_LAYOUT.TGA:
-    case _list_layout.LIST_LAYOUT.XRD:
-    case _list_layout.LIST_LAYOUT.CYCLIC_VOLTAMMETRY:
-    case _list_layout.LIST_LAYOUT.CDS:
-    case _list_layout.LIST_LAYOUT.MS:
-      return 0;
-    case _list_layout.LIST_LAYOUT.C13:
-      return 1;
-    case _list_layout.LIST_LAYOUT.H1:
-    case _list_layout.LIST_LAYOUT.F19:
-    case _list_layout.LIST_LAYOUT.P31:
-    case _list_layout.LIST_LAYOUT.N15:
-    case _list_layout.LIST_LAYOUT.Si29:
-    case _list_layout.LIST_LAYOUT.PLAIN:
-    default:
-      return 2;
-  }
-};
-var fixDigit = function fixDigit(input, precision) {
-  var output = input || 0.0;
-  return output.toFixed(precision);
-};
-var buildData = function buildData(entity) {
-  if (!entity) return {
-    isExist: false
-  };
-  var sp = entity && entity.spectrum;
-  var xLabel = sp ? "X (".concat(sp.xUnit, ")") : '';
-  var yLabel = sp ? "Y (".concat(sp.yUnit, ")") : '';
-  return {
-    entity: entity,
-    xLabel: xLabel,
-    yLabel: yLabel,
-    isExist: true
-  };
-};
-var toPeakStr = function toPeakStr(peaks) {
-  var arr = peaks.map(function (p) {
-    return "".concat(p.x, ",").concat(p.y);
-  });
-  var str = arr.join('#');
-  return str;
-};
-var spectraOps = (_spectraOps = {}, (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.PLAIN, {
-  head: '',
-  tail: '.'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.H1, {
-  head: '1H',
-  tail: '.'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.C13, {
-  head: '13C',
-  tail: '.'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.F19, {
-  head: '19F',
-  tail: '.'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.P31, {
-  head: '31P',
-  tail: '.'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.N15, {
-  head: '15N',
-  tail: '.'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.Si29, {
-  head: '29Si',
-  tail: '.'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.IR, {
-  head: 'IR',
-  tail: ' cm-1'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.RAMAN, {
-  head: 'RAMAN',
-  tail: ' cm-1'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.UVVIS, {
-  head: 'UV-VIS (absorption, solvent), λmax',
-  tail: ' nm'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.HPLC_UVVIS, {
-  head: 'HPLC UV/VIS (transmittance)',
-  tail: ''
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.TGA, {
-  head: 'THERMOGRAVIMETRIC ANALYSIS',
-  tail: ' SECONDS'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.MS, {
-  head: 'MASS',
-  tail: ' m/z'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.XRD, {
-  head: 'X-RAY DIFFRACTION',
-  tail: '.'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.CYCLIC_VOLTAMMETRY, {
-  head: 'CYCLIC VOLTAMMETRY',
-  tail: '.'
-}), (0, _defineProperty2.default)(_spectraOps, _list_layout.LIST_LAYOUT.CDS, {
-  head: 'CIRCULAR DICHROISM SPECTROSCOPY',
-  tail: '.'
-}), _spectraOps);
-var rmRef = function rmRef(peaks, shift) {
-  var refValue = shift.ref.value || shift.peak.x;
-  return peaks.map(function (p) {
-    return (0, _converter.IsSame)(p.x, refValue) ? null : p;
-  }).filter(function (r) {
-    return r != null;
-  });
-};
-var formatedMS = function formatedMS(peaks, maxY) {
-  var decimal = arguments.length > 2 && arguments[2] !== undefined ? arguments[2] : 2;
-  var isAscend = arguments.length > 3 && arguments[3] !== undefined ? arguments[3] : true;
-  var ascendFunc = function ascendFunc(a, b) {
-    return parseFloat(a) - parseFloat(b);
-  };
-  var descendFunc = function descendFunc(a, b) {
-    return parseFloat(b) - parseFloat(a);
-  };
-  var sortFunc = isAscend ? ascendFunc : descendFunc;
-  var ordered = {};
-  peaks.forEach(function (p) {
-    var x = fixDigit(p.x, decimal);
-    var better = !ordered[x] || p.y > ordered[x];
-    if (better) {
-      ordered = Object.assign({}, ordered, (0, _defineProperty2.default)({}, x, p.y));
-    }
-  });
-  ordered = Object.keys(ordered).sort(sortFunc).map(function (k) {
-    return {
-      x: k,
-      y: ordered[k]
-    };
-  });
-  return ordered.map(function (o) {
-    return "".concat(o.x, " (").concat(parseInt(100 * o.y / maxY, 10), ")");
-  }).join(', ');
-};
-var emLevel = function emLevel(boundary, val, lowerIsStronger) {
-  var maxY = boundary.maxY,
-    minY = boundary.minY;
-  var ratio = lowerIsStronger ? 100 * (val - minY) / (maxY - minY) : 100 * (maxY - val) / (maxY - minY);
-  if (ratio > 85) return 'vw';
-  if (ratio > 60) return 'w';
-  if (ratio > 45) return 'm';
-  if (ratio > 30) return 's';
-  return 'vs';
-};
-var formatedEm = function formatedEm(peaks, maxY) {
-  var decimal = arguments.length > 2 && arguments[2] !== undefined ? arguments[2] : 2;
-  var isAscend = arguments.length > 3 && arguments[3] !== undefined ? arguments[3] : true;
-  var isIntensity = arguments.length > 4 && arguments[4] !== undefined ? arguments[4] : false;
-  var boundary = arguments.length > 5 && arguments[5] !== undefined ? arguments[5] : {};
-  var lowerIsStronger = arguments.length > 6 && arguments[6] !== undefined ? arguments[6] : false;
-  var ascendFunc = function ascendFunc(a, b) {
-    return parseFloat(a) - parseFloat(b);
-  };
-  var descendFunc = function descendFunc(a, b) {
-    return parseFloat(b) - parseFloat(a);
-  };
-  var sortFunc = isAscend ? ascendFunc : descendFunc;
-  var ordered = {};
-  peaks.forEach(function (p) {
-    var x = fixDigit(p.x, decimal);
-    var better = !ordered[x] || p.y > ordered[x];
-    if (better) {
-      ordered = Object.assign({}, ordered, (0, _defineProperty2.default)({}, x, p.y));
-    }
-  });
-  ordered = Object.keys(ordered).sort(sortFunc).map(function (k) {
-    return {
-      x: k,
-      y: ordered[k]
-    };
-  });
-  if (isIntensity) {
-    return ordered.map(function (o) {
-      return "".concat(o.x, " (").concat(emLevel(boundary, o.y, lowerIsStronger), ")");
-    }).join(', ');
-  }
-  return ordered.map(function (o) {
-    return "".concat(o.x);
-  }).join(', ');
-};
-var formatedUvVis = function formatedUvVis(peaks, maxY) {
-  var decimal = arguments.length > 2 && arguments[2] !== undefined ? arguments[2] : 2;
-  var isAscend = arguments.length > 3 && arguments[3] !== undefined ? arguments[3] : true;
-  var isIntensity = arguments.length > 4 && arguments[4] !== undefined ? arguments[4] : false;
-  var boundary = arguments.length > 5 && arguments[5] !== undefined ? arguments[5] : {};
-  var lowerIsStronger = arguments.length > 6 && arguments[6] !== undefined ? arguments[6] : false;
-  var ascendFunc = function ascendFunc(a, b) {
-    return parseFloat(a) - parseFloat(b);
-  };
-  var descendFunc = function descendFunc(a, b) {
-    return parseFloat(b) - parseFloat(a);
-  };
-  var sortFunc = isAscend ? ascendFunc : descendFunc;
-  var ordered = {};
-  peaks.forEach(function (p) {
-    var x = fixDigit(p.x, decimal);
-    var better = !ordered[x] || p.y > ordered[x];
-    if (better) {
-      ordered = Object.assign({}, ordered, (0, _defineProperty2.default)({}, x, p.y));
-    }
-  });
-  ordered = Object.keys(ordered).sort(sortFunc).map(function (k) {
-    return {
-      x: k,
-      y: ordered[k]
-    };
-  });
-
-  // return ordered.map(o => `${o.x} (${o.y.toFixed(2)})`)
-  //   .join(', ');
-  return ordered.map(function (o) {
-    return "".concat(o.x);
-  }).join(', ');
-};
-var formatedHplcUvVis = function formatedHplcUvVis(peaks) {
-  var decimal = arguments.length > 1 && arguments[1] !== undefined ? arguments[1] : 2;
-  var integration = arguments.length > 2 ? arguments[2] : undefined;
-  var stack = [];
-  if (integration) {
-    stack = integration.stack;
-  }
-  var ordered = {};
-  peaks.forEach(function (p) {
-    var x = fixDigit(p.x, decimal);
-    var better = !ordered[x] || p.y > ordered[x];
-    if (better) {
-      ordered = Object.assign({}, ordered, (0, _defineProperty2.default)({}, x, p.y));
-    }
-  });
-  ordered = Object.keys(ordered).map(function (k) {
-    return {
-      x: k,
-      y: ordered[k]
-    };
-  });
-  var arrResult = [];
-  ordered.forEach(function (o) {
-    var pStr = "".concat(o.x, " (").concat(o.y.toFixed(2), ")");
-    if (stack) {
-      stack.forEach(function (s) {
-        if (s.xL <= o.x && s.xU >= o.x) {
-          pStr = "".concat(o.x, " (").concat(o.y.toFixed(2), ", AUC=").concat(s.absoluteArea, ")");
-        }
-      });
-    }
-    arrResult.push(pStr);
-  });
-  return arrResult.join(', ');
-};
-var rmShiftFromPeaks = function rmShiftFromPeaks(peaks, shift) {
-  var peaksXY = (0, _converter.ToXY)(peaks);
-  // const digit = spectraDigit(layout);
-  var rmShiftX = shift.ref.value || shift.peak.x;
-  var result = peaksXY.map(function (p) {
-    var srcX = parseFloat(p[0]);
-    var x = (0, _converter.IsSame)(srcX, rmShiftX) ? null : srcX;
-    if (!x) return null;
-    var y = parseFloat(p[1]);
-    return {
-      x: x,
-      y: y
-    };
-  }).filter(function (r) {
-    return r != null;
-  });
-  return result;
-};
-var peaksBody = function peaksBody(_ref) {
-  var peaks = _ref.peaks,
-    layout = _ref.layout,
-    decimal = _ref.decimal,
-    shift = _ref.shift,
-    isAscend = _ref.isAscend,
-    _ref$isIntensity = _ref.isIntensity,
-    isIntensity = _ref$isIntensity === void 0 ? false : _ref$isIntensity,
-    _ref$boundary = _ref.boundary,
-    boundary = _ref$boundary === void 0 ? {} : _ref$boundary,
-    integration = _ref.integration;
-  var result = rmShiftFromPeaks(peaks, shift);
-  var ascendFunc = function ascendFunc(a, b) {
-    return parseFloat(a.x) - parseFloat(b.x);
-  };
-  var descendFunc = function descendFunc(a, b) {
-    return parseFloat(b.x) - parseFloat(a.x);
-  };
-  var sortFunc = isAscend ? ascendFunc : descendFunc;
-  var ordered = result.sort(sortFunc);
-  var maxY = Math.max.apply(Math, (0, _toConsumableArray2.default)(ordered.map(function (o) {
-    return o.y;
-  })));
-  if (layout === _list_layout.LIST_LAYOUT.MS) {
-    return formatedMS(ordered, maxY, decimal, isAscend);
-  }
-  if (layout === _list_layout.LIST_LAYOUT.IR) {
-    return formatedEm(ordered, maxY, decimal, isAscend, isIntensity, boundary, true);
-  }
-  if (layout === _list_layout.LIST_LAYOUT.RAMAN) {
-    return formatedEm(ordered, maxY, decimal, isAscend, isIntensity, boundary, false);
-  }
-  if (layout === _list_layout.LIST_LAYOUT.UVVIS) {
-    return formatedUvVis(ordered, maxY, decimal, isAscend, isIntensity, boundary, false);
-  }
-  if (layout === _list_layout.LIST_LAYOUT.HPLC_UVVIS) {
-    return formatedHplcUvVis(ordered, decimal, integration);
-  }
-  if (layout === _list_layout.LIST_LAYOUT.TGA) {
-    return formatedEm(ordered, maxY, decimal, isAscend, isIntensity, boundary, false);
-  }
-  if (layout === _list_layout.LIST_LAYOUT.XRD) {
-    return formatedEm(ordered, maxY, decimal, isAscend, isIntensity, boundary, false);
-  }
-  if (layout === _list_layout.LIST_LAYOUT.CYCLIC_VOLTAMMETRY) {
-    return formatedEm(ordered, maxY, decimal, isAscend, isIntensity, boundary, false);
-  }
-  if (layout === _list_layout.LIST_LAYOUT.CDS) {
-    return formatedEm(ordered, maxY, decimal, isAscend, isIntensity, boundary, false);
-  }
-  return ordered.map(function (o) {
-    return fixDigit(o.x, decimal);
-  }).join(', ');
-};
-var peaksWrapper = function peaksWrapper(layout, shift) {
-  var solvTxt = '';
-  if (shift.ref.label) {
-    solvTxt = " (".concat(shift.ref.label, ")");
-  }
-  if (layout === _list_layout.LIST_LAYOUT.PLAIN) {
-    return {
-      head: '',
-      tail: ''
-    };
-  }
-  var ops = spectraOps[layout];
-  return {
-    head: "".concat(ops.head).concat(solvTxt, " = "),
-    tail: ops.tail
-  };
-};
-var isNmrLayout = function isNmrLayout(layoutSt) {
-  return [_list_layout.LIST_LAYOUT.H1, _list_layout.LIST_LAYOUT.C13, _list_layout.LIST_LAYOUT.F19, _list_layout.LIST_LAYOUT.P31, _list_layout.LIST_LAYOUT.N15, _list_layout.LIST_LAYOUT.Si29].indexOf(layoutSt) >= 0;
-};
-var is29SiLayout = function is29SiLayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.Si29 === layoutSt;
-};
-var is15NLayout = function is15NLayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.N15 === layoutSt;
-};
-var is31PLayout = function is31PLayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.P31 === layoutSt;
-};
-var is19FLayout = function is19FLayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.F19 === layoutSt;
-};
-var is13CLayout = function is13CLayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.C13 === layoutSt;
-};
-var is1HLayout = function is1HLayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.H1 === layoutSt;
-};
-var isMsLayout = function isMsLayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.MS === layoutSt;
-};
-var isIrLayout = function isIrLayout(layoutSt) {
-  return [_list_layout.LIST_LAYOUT.IR, 'INFRARED'].indexOf(layoutSt) >= 0;
-};
-var isRamanLayout = function isRamanLayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.RAMAN === layoutSt;
-};
-var isUvVisLayout = function isUvVisLayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.UVVIS === layoutSt;
-};
-var isHplcUvVisLayout = function isHplcUvVisLayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.HPLC_UVVIS === layoutSt;
-};
-var isTGALayout = function isTGALayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.TGA === layoutSt;
-};
-var isXRDLayout = function isXRDLayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.XRD === layoutSt;
-};
-var isCyclicVoltaLayout = function isCyclicVoltaLayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.CYCLIC_VOLTAMMETRY === layoutSt;
-};
-var isCDSLayout = function isCDSLayout(layoutSt) {
-  return _list_layout.LIST_LAYOUT.CDS === layoutSt;
-};
-var isEmWaveLayout = function isEmWaveLayout(layoutSt) {
-  return [_list_layout.LIST_LAYOUT.IR, _list_layout.LIST_LAYOUT.RAMAN, _list_layout.LIST_LAYOUT.UVVIS, _list_layout.LIST_LAYOUT.HPLC_UVVIS].indexOf(layoutSt) >= 0;
-};
-var getNmrTyp = function getNmrTyp(layout) {
-  switch (layout) {
-    case _list_layout.LIST_LAYOUT.H1:
-      return 'H';
-    case _list_layout.LIST_LAYOUT.C13:
-      return 'C';
-    case _list_layout.LIST_LAYOUT.F19:
-      return 'F';
-    case _list_layout.LIST_LAYOUT.P31:
-      return 'P';
-    case _list_layout.LIST_LAYOUT.N15:
-      return 'N';
-    case _list_layout.LIST_LAYOUT.Si29:
-      return 'Si';
-    default:
-      return '';
-  }
-};
-var formatPeaksByPrediction = function formatPeaksByPrediction(peaks, layout, isAscend, decimal) {
-  var predictions = arguments.length > 4 && arguments[4] !== undefined ? arguments[4] : [];
-  var pDict = {};
-  peaks.forEach(function (p) {
-    pDict[p.x.toFixed(decimal)] = 0;
-  });
-  predictions.forEach(function (p) {
-    var key = p.real.toFixed(decimal);
-    if (typeof pDict[key] === 'number') {
-      pDict[key] += 1;
-    }
-  });
-  var typ = getNmrTyp(layout);
-  var ascendFunc = function ascendFunc(a, b) {
-    return parseFloat(a.k) - parseFloat(b.k);
-  };
-  var descendFunc = function descendFunc(a, b) {
-    return parseFloat(b.k) - parseFloat(a.k);
-  };
-  var sortFunc = isAscend ? ascendFunc : descendFunc;
-  var pArr = Object.keys(pDict).map(function (k) {
-    if (pDict[k] === 1) return {
-      k: k,
-      v: k
-    };
-    return {
-      k: k,
-      v: "".concat(k, " (").concat(pDict[k]).concat(typ, ")")
-    };
-  }).sort(sortFunc);
-  var body = pArr.map(function (p) {
-    return p.v;
-  }).join(', ');
-  return body;
-};
-var compareColors = function compareColors(idx) {
-  return ['#ABB2B9', '#EDBB99', '#ABEBC6', '#D2B4DE', '#F9E79F'][idx % 5];
-};
-var mutiEntitiesColors = function mutiEntitiesColors(idx) {
-  return ['#fa8231', '#f7b731', '#0fb9b1', '#2d98da', '#3867d6', '#8854d0', '#4b6584'][idx % 7];
-};
-var Format = {
-  toPeakStr: toPeakStr,
-  buildData: buildData,
-  spectraDigit: spectraDigit,
-  spectraOps: spectraOps,
-  peaksBody: peaksBody,
-  peaksWrapper: peaksWrapper,
-  rmRef: rmRef,
-  rmShiftFromPeaks: rmShiftFromPeaks,
-  isNmrLayout: isNmrLayout,
-  is13CLayout: is13CLayout,
-  is1HLayout: is1HLayout,
-  is19FLayout: is19FLayout,
-  is31PLayout: is31PLayout,
-  is15NLayout: is15NLayout,
-  is29SiLayout: is29SiLayout,
-  isMsLayout: isMsLayout,
-  isIrLayout: isIrLayout,
-  isRamanLayout: isRamanLayout,
-  isUvVisLayout: isUvVisLayout,
-  isHplcUvVisLayout: isHplcUvVisLayout,
-  isTGALayout: isTGALayout,
-  isXRDLayout: isXRDLayout,
-  isCyclicVoltaLayout: isCyclicVoltaLayout,
-  isCDSLayout: isCDSLayout,
-  isEmWaveLayout: isEmWaveLayout,
-  fixDigit: fixDigit,
-  formatPeaksByPrediction: formatPeaksByPrediction,
-  formatedMS: formatedMS,
-  formatedEm: formatedEm,
-  calcMpyCenter: _multiplicity_calc.calcMpyCenter,
-  compareColors: compareColors,
-  mutiEntitiesColors: mutiEntitiesColors
-};
-var _default = Format;
-exports.default = _default;