@complat/react-spectra-editor 1.0.0-rc2 → 1.0.0-rc20.patch-1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (202) hide show
  1. package/README.md +16 -0
  2. package/dist/__tests__/fixtures/aif_jcamp_1.js +136 -0
  3. package/dist/__tests__/fixtures/aif_jcamp_2.js +122 -0
  4. package/dist/__tests__/fixtures/backup/nmr1h_a.js +3518 -0
  5. package/dist/__tests__/fixtures/backup/xrd_jcamp_1.js +10705 -0
  6. package/dist/__tests__/fixtures/cds_jcamp.js +861 -0
  7. package/dist/__tests__/fixtures/compare_ir_1_jcamp.js +585 -0
  8. package/dist/__tests__/fixtures/compare_ir_2_jcamp.js +515 -0
  9. package/dist/__tests__/fixtures/compare_uv_vis_jcamp.js +640 -0
  10. package/dist/__tests__/fixtures/cyclic_voltammetry_1.js +778 -0
  11. package/dist/__tests__/fixtures/cyclic_voltammetry_2.js +758 -0
  12. package/dist/__tests__/fixtures/cyclic_voltammetry_3.js +759 -0
  13. package/dist/__tests__/fixtures/dls_acf_jcamp.js +148 -0
  14. package/dist/__tests__/fixtures/dls_intensity_jcamp.js +151 -0
  15. package/dist/__tests__/fixtures/emissions_jcamp.js +883 -0
  16. package/dist/__tests__/fixtures/hplc_uvvis_jcamp.js +638 -0
  17. package/dist/__tests__/fixtures/hplc_uvvis_jcamp_2.js +221 -0
  18. package/dist/__tests__/fixtures/ir_jcamp.js +148 -0
  19. package/dist/__tests__/fixtures/ir_result.js +46 -0
  20. package/dist/__tests__/fixtures/ir_svg.js +8 -0
  21. package/dist/__tests__/fixtures/ms_jcamp.js +64 -0
  22. package/dist/__tests__/fixtures/nmr13c_dept_jcamp.js +3543 -0
  23. package/dist/__tests__/fixtures/nmr13c_jcamp.js +1229 -0
  24. package/dist/__tests__/fixtures/nmr15n_jcamp.js +7177 -0
  25. package/dist/__tests__/fixtures/nmr19f_jcamp.js +6560 -0
  26. package/dist/__tests__/fixtures/nmr1h_2_jcamp.js +2005 -0
  27. package/dist/__tests__/fixtures/nmr1h_jcamp.js +4516 -0
  28. package/dist/__tests__/fixtures/nmr29si_jcamp.js +3029 -0
  29. package/dist/__tests__/fixtures/nmr31p_jcamp.js +3418 -0
  30. package/dist/__tests__/fixtures/nmr_result.js +68 -0
  31. package/dist/__tests__/fixtures/nmr_svg.js +8 -0
  32. package/dist/__tests__/fixtures/phenylalanin.js +142 -0
  33. package/dist/__tests__/fixtures/qDescValue.js +65 -0
  34. package/dist/__tests__/fixtures/raman_jcamp.js +410 -0
  35. package/dist/__tests__/fixtures/sec_1_jcamp.js +425 -0
  36. package/dist/__tests__/fixtures/sec_2_jcamp.js +407 -0
  37. package/dist/__tests__/fixtures/sec_3_jcamp.js +408 -0
  38. package/dist/__tests__/fixtures/sec_4_jcamp.js +407 -0
  39. package/dist/__tests__/fixtures/tga_jcamp.js +4157 -0
  40. package/dist/__tests__/fixtures/uv_vis_jcamp.js +249 -0
  41. package/dist/__tests__/fixtures/xrd_jcamp_1.js +436 -0
  42. package/dist/__tests__/fixtures/xrd_jcamp_2.js +955 -0
  43. package/dist/__tests__/fixtures/xrd_jcamp_3.js +1871 -0
  44. package/dist/__tests__/units/components/panel/graph_selection.test.js +72 -0
  45. package/dist/__tests__/units/components/panel/peaks.test.js +87 -0
  46. package/dist/actions/curve.js +15 -14
  47. package/dist/actions/cyclic_voltammetry.js +40 -60
  48. package/dist/actions/edit_peak.js +8 -12
  49. package/dist/actions/forecast.js +16 -24
  50. package/dist/actions/integration.js +12 -18
  51. package/dist/actions/jcamp.js +16 -24
  52. package/dist/actions/layout.js +4 -6
  53. package/dist/actions/manager.js +20 -30
  54. package/dist/actions/meta.js +4 -6
  55. package/dist/actions/multiplicity.js +24 -36
  56. package/dist/actions/scan.js +12 -18
  57. package/dist/actions/shift.js +8 -12
  58. package/dist/actions/status.js +12 -18
  59. package/dist/actions/submit.js +16 -24
  60. package/dist/actions/threshold.js +20 -30
  61. package/dist/actions/ui.js +25 -31
  62. package/dist/actions/wavelength.js +4 -6
  63. package/dist/app.js +25 -23
  64. package/dist/components/cmd_bar/01_viewer.js +24 -34
  65. package/dist/components/cmd_bar/02_zoom.js +18 -28
  66. package/dist/components/cmd_bar/03_peak.js +50 -66
  67. package/dist/components/cmd_bar/04_integration.js +70 -84
  68. package/dist/components/cmd_bar/05_multiplicity.js +42 -56
  69. package/dist/components/cmd_bar/06_undo_redo.js +22 -36
  70. package/dist/components/cmd_bar/07_pecker.js +24 -34
  71. package/dist/components/cmd_bar/common.js +11 -7
  72. package/dist/components/cmd_bar/index.js +17 -23
  73. package/dist/components/cmd_bar/r01_layout.js +79 -56
  74. package/dist/components/cmd_bar/r02_scan.js +70 -87
  75. package/dist/components/cmd_bar/r03_threshold.js +54 -68
  76. package/dist/components/cmd_bar/r04_submit.js +71 -83
  77. package/dist/components/cmd_bar/r05_submit_btn.js +64 -72
  78. package/dist/components/cmd_bar/r06_predict_btn.js +142 -152
  79. package/dist/components/cmd_bar/r07_wavelength_btn.js +28 -36
  80. package/dist/components/cmd_bar/tri_btn.js +91 -113
  81. package/dist/components/common/chem.js +2 -3
  82. package/dist/components/common/comps.js +2 -2
  83. package/dist/components/common/draw.js +30 -11
  84. package/dist/components/d3_line/index.js +154 -176
  85. package/dist/components/d3_line/line_focus.js +595 -739
  86. package/dist/components/d3_multi/index.js +153 -174
  87. package/dist/components/d3_multi/multi_focus.js +725 -850
  88. package/dist/components/d3_rect/index.js +112 -134
  89. package/dist/components/d3_rect/rect_focus.js +163 -208
  90. package/dist/components/forecast/comps.js +60 -68
  91. package/dist/components/forecast/ir_comps.js +49 -56
  92. package/dist/components/forecast/ir_viewer.js +61 -68
  93. package/dist/components/forecast/nmr_comps.js +62 -72
  94. package/dist/components/forecast/nmr_viewer.js +59 -68
  95. package/dist/components/forecast/section_loading.js +39 -63
  96. package/dist/components/forecast_viewer.js +109 -119
  97. package/dist/components/multi_jcamps_viewer.js +97 -113
  98. package/dist/components/panel/compare.js +183 -192
  99. package/dist/components/panel/cyclic_voltamery_data.js +149 -165
  100. package/dist/components/panel/graph_selection.js +143 -132
  101. package/dist/components/panel/index.js +112 -144
  102. package/dist/components/panel/info.js +125 -132
  103. package/dist/components/panel/multiplicity.js +215 -223
  104. package/dist/components/panel/multiplicity_coupling.js +108 -136
  105. package/dist/components/panel/multiplicity_select.js +43 -51
  106. package/dist/components/panel/peaks.js +130 -132
  107. package/dist/constants/action_type.js +23 -39
  108. package/dist/constants/list_layout.js +7 -4
  109. package/dist/constants/list_shift.js +117 -103
  110. package/dist/constants/list_ui.js +3 -6
  111. package/dist/constants/list_wavelength.js +7 -8
  112. package/dist/fn.js +2 -3
  113. package/dist/helpers/brush.js +49 -65
  114. package/dist/helpers/calc.js +2 -4
  115. package/dist/helpers/carbonFeatures.js +22 -20
  116. package/dist/helpers/cfg.js +49 -67
  117. package/dist/helpers/chem.js +450 -393
  118. package/dist/helpers/compass.js +92 -83
  119. package/dist/helpers/converter.js +52 -65
  120. package/dist/helpers/extractParams.js +60 -52
  121. package/dist/helpers/extractPeaksEdit.js +29 -25
  122. package/dist/helpers/focus.js +2 -6
  123. package/dist/helpers/format.js +416 -361
  124. package/dist/helpers/init.js +41 -37
  125. package/dist/helpers/integration.js +18 -21
  126. package/dist/helpers/mount.js +57 -61
  127. package/dist/helpers/multiplicity.js +19 -24
  128. package/dist/helpers/multiplicity_calc.js +39 -50
  129. package/dist/helpers/multiplicity_complat.js +21 -47
  130. package/dist/helpers/multiplicity_manual.js +49 -55
  131. package/dist/helpers/multiplicity_verify_basic.js +108 -111
  132. package/dist/helpers/shift.js +15 -23
  133. package/dist/helpers/zoom.js +7 -11
  134. package/dist/index.js +680 -630
  135. package/dist/layer_content.js +40 -43
  136. package/dist/layer_init.js +162 -184
  137. package/dist/layer_prism.js +38 -41
  138. package/dist/reducers/index.js +2 -3
  139. package/dist/reducers/reducer_curve.js +35 -26
  140. package/dist/reducers/reducer_edit_peak.js +122 -98
  141. package/dist/reducers/reducer_forecast.js +57 -44
  142. package/dist/reducers/reducer_integration.js +135 -103
  143. package/dist/reducers/reducer_jcamp.js +49 -44
  144. package/dist/reducers/reducer_layout.js +5 -6
  145. package/dist/reducers/reducer_manager.js +5 -6
  146. package/dist/reducers/reducer_meta.js +5 -6
  147. package/dist/reducers/reducer_multiplicity.js +100 -77
  148. package/dist/reducers/reducer_scan.js +17 -20
  149. package/dist/reducers/reducer_shift.js +115 -70
  150. package/dist/reducers/reducer_simulation.js +7 -8
  151. package/dist/reducers/reducer_status.js +5 -6
  152. package/dist/reducers/reducer_submit.js +12 -15
  153. package/dist/reducers/reducer_threshold.js +5 -6
  154. package/dist/reducers/reducer_ui.js +5 -6
  155. package/dist/reducers/reducer_voltammetry.js +156 -96
  156. package/dist/reducers/reducer_wavelength.js +5 -6
  157. package/dist/reducers/undo_redo_config.js +3 -5
  158. package/dist/sagas/index.js +2 -15
  159. package/dist/sagas/saga_edit_peak.js +54 -68
  160. package/dist/sagas/saga_manager.js +86 -130
  161. package/dist/sagas/saga_meta.js +25 -31
  162. package/dist/sagas/saga_multi_entities.js +40 -103
  163. package/dist/sagas/saga_multiplicity.js +336 -406
  164. package/dist/sagas/saga_ui.js +296 -475
  165. package/dist/setupTests.js +8 -0
  166. package/dist/third_party/jAnalyzer.js +66 -67
  167. package/dist/third_party/peakInterval.js +34 -34
  168. package/package.json +14 -14
  169. package/dist/components/cmd_bar/03_peak_bk.js +0 -139
  170. package/dist/components/cmd_bar/04_integration_bk.js +0 -180
  171. package/dist/components/cmd_bar/05_multiplicity_bk.js +0 -131
  172. package/dist/components/cmd_bar/r01_layout_bk.js +0 -186
  173. package/dist/components/cmd_bar/r06_predict_btn_bk.js +0 -220
  174. package/dist/components/d3_line/line_focus_bk.js +0 -825
  175. package/dist/components/d3_multi/index_bk.js +0 -210
  176. package/dist/components/d3_multi/multi_focus_bk.js +0 -533
  177. package/dist/components/panel/compare_bk.js +0 -256
  178. package/dist/components/panel/cyclic_voltamery_data_bk.js +0 -292
  179. package/dist/components/panel/index_bk.js +0 -178
  180. package/dist/components/panel/info_bk.js +0 -235
  181. package/dist/components/panel/multiplicity_bk.js +0 -280
  182. package/dist/helpers/carbonFeatures_bk.js +0 -45
  183. package/dist/helpers/cfg_bk.js +0 -80
  184. package/dist/helpers/chem_bk.js +0 -787
  185. package/dist/helpers/compass_bk.js +0 -149
  186. package/dist/helpers/converter_bk.js +0 -96
  187. package/dist/helpers/extractPeaksEdit_bk.js +0 -53
  188. package/dist/helpers/format_bk.js +0 -497
  189. package/dist/index_bk.js +0 -640
  190. package/dist/layer_content_bk.js +0 -105
  191. package/dist/layer_init_bk.js +0 -235
  192. package/dist/layer_prism_bk.js +0 -133
  193. package/dist/reducers/reducer_edit_peak_bk.js +0 -108
  194. package/dist/reducers/reducer_integration_bk.js +0 -134
  195. package/dist/reducers/reducer_jcamp_bk.js +0 -71
  196. package/dist/reducers/reducer_multiplicity_bk.js +0 -126
  197. package/dist/reducers/reducer_shift_bk.js +0 -88
  198. package/dist/reducers/reducer_voltammetry_bk.js +0 -287
  199. package/dist/sagas/saga_edit_peak_bk.js +0 -73
  200. package/dist/sagas/saga_multi_entities_bk.js +0 -106
  201. package/dist/sagas/saga_multiplicity_bk.js +0 -351
  202. package/dist/sagas/saga_ui_bk.js +0 -453
@@ -1,7 +1,6 @@
1
1
  "use strict";
2
2
 
3
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  var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
4
- var _typeof = require("@babel/runtime/helpers/typeof");
5
4
  Object.defineProperty(exports, "__esModule", {
6
5
  value: true
7
6
  });
@@ -9,58 +8,63 @@ exports.InitTip = exports.InitScale = exports.InitPathCall = exports.InitAxisCal
9
8
  var d3 = _interopRequireWildcard(require("d3"));
10
9
  var _d3Tip = _interopRequireDefault(require("d3-tip"));
11
10
  var _format = _interopRequireDefault(require("./format"));
12
- function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
13
- function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
14
- var InitScale = function InitScale(target) {
15
- var reverse = arguments.length > 1 && arguments[1] !== undefined ? arguments[1] : true;
16
- var xRange = reverse ? [target.w, 0] : [0, target.w];
17
- var x = d3.scaleLinear().range(xRange);
18
- var y = d3.scaleLinear().range([target.h, 0]);
11
+ function _getRequireWildcardCache(e) { if ("function" != typeof WeakMap) return null; var r = new WeakMap(), t = new WeakMap(); return (_getRequireWildcardCache = function (e) { return e ? t : r; })(e); }
12
+ function _interopRequireWildcard(e, r) { if (!r && e && e.__esModule) return e; if (null === e || "object" != typeof e && "function" != typeof e) return { default: e }; var t = _getRequireWildcardCache(r); if (t && t.has(e)) return t.get(e); var n = { __proto__: null }, a = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var u in e) if ("default" !== u && Object.prototype.hasOwnProperty.call(e, u)) { var i = a ? Object.getOwnPropertyDescriptor(e, u) : null; i && (i.get || i.set) ? Object.defineProperty(n, u, i) : n[u] = e[u]; } return n.default = e, t && t.set(e, n), n; }
13
+ const InitScale = function (target) {
14
+ let reverse = arguments.length > 1 && arguments[1] !== undefined ? arguments[1] : true;
15
+ const xRange = reverse ? [target.w, 0] : [0, target.w];
16
+ const x = d3.scaleLinear().range(xRange);
17
+ const y = d3.scaleLinear().range([target.h, 0]);
19
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  return {
20
- x: x,
21
- y: y
19
+ x,
20
+ y
22
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  };
23
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  };
24
23
  exports.InitScale = InitScale;
25
- var InitAxisCall = function InitAxisCall(count) {
26
- var yAxisFormat = d3.format('.2n');
27
- var xAxisCall = d3.axisBottom().ticks(10);
28
- var yAxisCall = d3.axisLeft().ticks(count).tickFormat(yAxisFormat);
24
+ const InitAxisCall = count => {
25
+ const yAxisFormat = d3.format('.2n');
26
+ const xAxisCall = d3.axisBottom().ticks(10);
27
+ const yAxisCall = d3.axisLeft().ticks(count).tickFormat(yAxisFormat);
29
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  return {
30
29
  x: xAxisCall,
31
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  y: yAxisCall
32
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  };
33
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  };
34
33
  exports.InitAxisCall = InitAxisCall;
35
- var InitPathCall = function InitPathCall(target) {
36
- var line = d3.line().x(function (d) {
37
- return target.scales.x(d.x);
38
- }).y(function (d) {
39
- return target.scales.y(d.y);
40
- });
34
+ const InitPathCall = target => {
35
+ const line = d3.line().x(d => target.scales.x(d.x)).y(d => target.scales.y(d.y));
41
36
  return line;
42
37
  };
43
38
  exports.InitPathCall = InitPathCall;
44
- var tpStyle = function tpStyle() {
45
- var stBorder = ' border: 2px solid #aaa;';
46
- var stBorderRadius = ' border-radius: 5px;';
47
- var stBackground = ' background: #555;';
48
- var stColor = ' color: #fff;';
49
- var stPadding = ' padding: 8px;';
50
- var stOpacity = ' opacity: 0.9; ';
51
- var stZindex = ' z-index: 1999;';
52
- var stFontFamily = ' font-family: Helvetica;';
53
- var style = stBorder + stBorderRadius + stBackground + stColor + stPadding + stOpacity + stPadding + stZindex + stFontFamily;
39
+ const tpStyle = () => {
40
+ const stBorder = ' border: 2px solid #aaa;';
41
+ const stBorderRadius = ' border-radius: 5px;';
42
+ const stBackground = ' background: #555;';
43
+ const stColor = ' color: #fff;';
44
+ const stPadding = ' padding: 8px;';
45
+ const stOpacity = ' opacity: 0.9; ';
46
+ const stZindex = ' z-index: 1999;';
47
+ const stFontFamily = ' font-family: Helvetica;';
48
+ const style = stBorder + stBorderRadius + stBackground + stColor + stPadding + stOpacity + stPadding + stZindex + stFontFamily;
54
49
  return style;
55
50
  };
56
- var tpDiv = function tpDiv(d, digits) {
57
- return "\n <div\n class=\"peak-tp\"\n style=\"".concat(tpStyle(), "\"\n >\n <span> x: ").concat(_format.default.fixDigit(d.x, digits), "</span>\n <br/>\n <span> y: ").concat(d3.format('.2~e')(d.y), "</span>\n <div>\n ");
58
- };
59
- var InitTip = function InitTip() {
51
+ const tpDiv = (d, digits) => `
52
+ <div
53
+ class="peak-tp"
54
+ style="${tpStyle()}"
55
+ >
56
+ <span> x: ${_format.default.fixDigit(d.x, digits)}</span>
57
+ <br/>
58
+ <span> y: ${d3.format('.2~e')(d.y)}</span>
59
+ <div>
60
+ `;
61
+ const InitTip = () => {
60
62
  d3.select('.peak-tp').remove();
61
- var tip = (0, _d3Tip.default)().attr('class', 'd3-tip').html(function (_ref) {
62
- var d = _ref.d,
63
- layout = _ref.layout;
63
+ const tip = (0, _d3Tip.default)().attr('class', 'd3-tip').html(_ref => {
64
+ let {
65
+ d,
66
+ layout
67
+ } = _ref;
64
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  return tpDiv(d, _format.default.spectraDigit(layout));
65
69
  });
66
70
  return tip;
@@ -7,11 +7,10 @@ exports.getArea = exports.getAbsoluteArea = exports.calcArea = void 0;
7
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  var _calc = require("./calc");
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  /* eslint-disable no-mixed-operators */
9
9
 
10
- var getArea = function getArea(xL, xU, data) {
11
- var iL = data.length - 1,
12
- iU = 0;
13
- for (var i = 0; i < data.length; i += 1) {
14
- var pt = data[i];
10
+ const getArea = (xL, xU, data) => {
11
+ let [iL, iU] = [data.length - 1, 0];
12
+ for (let i = 0; i < data.length; i += 1) {
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+ const pt = data[i];
15
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  if (xL <= pt.x && pt.x <= xU) {
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  if (iL > i) {
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  iL = i;
@@ -24,31 +23,29 @@ var getArea = function getArea(xL, xU, data) {
24
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  return Math.abs(data[iU].k - data[iL].k);
25
24
  };
26
25
  exports.getArea = getArea;
27
- var getAbsoluteArea = function getAbsoluteArea(xL, xU, data) {
28
- var ps = data.filter(function (d) {
29
- return d.x > xL && d.x < xU;
30
- });
26
+ const getAbsoluteArea = (xL, xU, data) => {
27
+ const ps = data.filter(d => d.x > xL && d.x < xU);
31
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  if (!ps[0]) return 0;
32
- var area = 0;
33
- var point1 = ps[0];
34
- var point2 = ps[ps.length - 1];
35
- var slope = (0, _calc.calcSlope)(point1.x, point1.y, point2.x, point2.y);
36
- var lastDY = point1.y;
29
+ let area = 0;
30
+ const point1 = ps[0];
31
+ const point2 = ps[ps.length - 1];
32
+ const slope = (0, _calc.calcSlope)(point1.x, point1.y, point2.x, point2.y);
33
+ let lastDY = point1.y;
37
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  if (ps.length > 1) {
38
- for (var i = 1; i < ps.length; i += 1) {
39
- var pt = ps[i];
40
- var lastD = ps[i - 1];
41
- var y = slope * (pt.x - lastD.x) + lastDY;
35
+ for (let i = 1; i < ps.length; i += 1) {
36
+ const pt = ps[i];
37
+ const lastD = ps[i - 1];
38
+ const y = slope * (pt.x - lastD.x) + lastDY;
42
39
  lastDY = y;
43
- var delta = Math.abs(pt.y - y);
40
+ const delta = Math.abs(pt.y - y);
44
41
  area += delta;
45
42
  }
46
43
  }
47
44
  return area;
48
45
  };
49
46
  exports.getAbsoluteArea = getAbsoluteArea;
50
- var calcArea = function calcArea(d, refArea, refFactor) {
51
- var ignoreRef = arguments.length > 3 && arguments[3] !== undefined ? arguments[3] : false;
47
+ const calcArea = function (d, refArea, refFactor) {
48
+ let ignoreRef = arguments.length > 3 && arguments[3] !== undefined ? arguments[3] : false;
52
49
  if (ignoreRef) {
53
50
  return d.absoluteArea.toFixed(2);
54
51
  }
@@ -5,111 +5,107 @@ Object.defineProperty(exports, "__esModule", {
5
5
  });
6
6
  exports.MountThresLine = exports.MountTags = exports.MountRef = exports.MountPath = exports.MountMarker = exports.MountMainFrame = exports.MountGrid = exports.MountComparePath = exports.MountClip = exports.MountBars = exports.MountAxisLabelY = exports.MountAxisLabelX = exports.MountAxis = void 0;
7
7
  var _compass = require("./compass");
8
- var MountTags = function MountTags(target) {
9
- var igbPath = target.root.append('g').attr('class', 'igbPath-clip').attr('clip-path', 'url(#clip)');
10
- var igcPath = target.root.append('g').attr('class', 'igcPath-clip').attr('clip-path', 'url(#clip)');
11
- var igtPath = target.root.append('g').attr('class', 'igtPath-clip').attr('clip-path', 'url(#clip)');
12
- var pPath = target.root.append('g').attr('class', 'pPath-clip').attr('clip-path', 'url(#clip)');
13
- var bpPath = target.root.append('g').attr('class', 'bpPath-clip').attr('clip-path', 'url(#clip)');
14
- var bpTxt = target.root.append('g').attr('class', 'bpTxt-clip').attr('clip-path', 'url(#clip)');
15
- var mpybPath = target.root.append('g').attr('class', 'mpybPath-clip').attr('clip-path', 'url(#clip)');
16
- var mpyt1Path = target.root.append('g').attr('class', 'mpyt1Path-clip').attr('clip-path', 'url(#clip)');
17
- var mpyt2Path = target.root.append('g').attr('class', 'mpyt2Path-clip').attr('clip-path', 'url(#clip)');
18
- var mpypPath = target.root.append('g').attr('class', 'mpypPath-clip').attr('clip-path', 'url(#clip)');
19
- var aucPath = target.root.append('g').attr('class', 'aucPath-clip').attr('clip-path', 'url(#clip)');
20
- var peckerPath = target.root.append('g').attr('class', 'peckerPath-clip').attr('clip-path', 'url(#clip)');
8
+ const MountTags = target => {
9
+ const igbPath = target.root.append('g').attr('class', 'igbPath-clip').attr('clip-path', 'url(#clip)');
10
+ const igcPath = target.root.append('g').attr('class', 'igcPath-clip').attr('clip-path', 'url(#clip)');
11
+ const igtPath = target.root.append('g').attr('class', 'igtPath-clip').attr('clip-path', 'url(#clip)');
12
+ const pPath = target.root.append('g').attr('class', 'pPath-clip').attr('clip-path', 'url(#clip)');
13
+ const bpPath = target.root.append('g').attr('class', 'bpPath-clip').attr('clip-path', 'url(#clip)');
14
+ const bpTxt = target.root.append('g').attr('class', 'bpTxt-clip').attr('clip-path', 'url(#clip)');
15
+ const mpybPath = target.root.append('g').attr('class', 'mpybPath-clip').attr('clip-path', 'url(#clip)');
16
+ const mpyt1Path = target.root.append('g').attr('class', 'mpyt1Path-clip').attr('clip-path', 'url(#clip)');
17
+ const mpyt2Path = target.root.append('g').attr('class', 'mpyt2Path-clip').attr('clip-path', 'url(#clip)');
18
+ const mpypPath = target.root.append('g').attr('class', 'mpypPath-clip').attr('clip-path', 'url(#clip)');
19
+ const aucPath = target.root.append('g').attr('class', 'aucPath-clip').attr('clip-path', 'url(#clip)');
20
+ const peckerPath = target.root.append('g').attr('class', 'peckerPath-clip').attr('clip-path', 'url(#clip)');
21
21
  return {
22
- pPath: pPath,
23
- bpPath: bpPath,
24
- bpTxt: bpTxt,
25
- igbPath: igbPath,
26
- igcPath: igcPath,
27
- igtPath: igtPath,
28
- mpybPath: mpybPath,
29
- mpyt1Path: mpyt1Path,
30
- mpyt2Path: mpyt2Path,
31
- mpypPath: mpypPath,
32
- aucPath: aucPath,
33
- peckerPath: peckerPath // eslint-disable-line
22
+ pPath,
23
+ bpPath,
24
+ bpTxt,
25
+ igbPath,
26
+ igcPath,
27
+ igtPath,
28
+ mpybPath,
29
+ mpyt1Path,
30
+ mpyt2Path,
31
+ mpypPath,
32
+ aucPath,
33
+ peckerPath // eslint-disable-line
34
34
  };
35
35
  };
36
36
  exports.MountTags = MountTags;
37
- var MountBars = function MountBars(target) {
38
- var bars = target.root.append('g').attr('class', 'bars-clip').attr('clip-path', 'url(#clip)');
37
+ const MountBars = target => {
38
+ const bars = target.root.append('g').attr('class', 'bars-clip').attr('clip-path', 'url(#clip)');
39
39
  return bars;
40
40
  };
41
41
  exports.MountBars = MountBars;
42
- var MountRef = function MountRef(target) {
43
- var ref = target.root.append('g').attr('class', 'ref-clip').attr('clip-path', 'url(#ref-clip)');
42
+ const MountRef = target => {
43
+ const ref = target.root.append('g').attr('class', 'ref-clip').attr('clip-path', 'url(#ref-clip)');
44
44
  return ref;
45
45
  };
46
46
  exports.MountRef = MountRef;
47
- var MountPath = function MountPath(target, color) {
48
- var path = target.root.append('g').attr('class', 'line-clip').attr('clip-path', 'url(#clip)').append('path').attr('class', 'line').style('fill', 'none').style('stroke', color).style('stroke-width', 1).on('click', function () {
49
- return (0, _compass.ClickCompass)(target);
50
- });
47
+ const MountPath = (target, color) => {
48
+ const path = target.root.append('g').attr('class', 'line-clip').attr('clip-path', 'url(#clip)').append('path').attr('class', 'line').style('fill', 'none').style('stroke', color).style('stroke-width', 1).on('click', () => (0, _compass.ClickCompass)(target));
51
49
  return path;
52
50
  };
53
51
  exports.MountPath = MountPath;
54
- var MountComparePath = function MountComparePath(target, color, id) {
55
- var alpha = arguments.length > 3 && arguments[3] !== undefined ? arguments[3] : 1;
56
- var path = target.root.append('g').attr('class', 'line-clip-compare').attr('id', id).attr('clip-path', 'url(#clip)').append('path').attr('class', 'line').style('fill', 'none').style('stroke', color).style('stroke-opacity', alpha).style('stroke-width', 1).style('stroke-dasharray', '30, 3').on('click', function () {
57
- return (0, _compass.ClickCompass)(target);
58
- });
52
+ const MountComparePath = function (target, color, id) {
53
+ let alpha = arguments.length > 3 && arguments[3] !== undefined ? arguments[3] : 1;
54
+ const path = target.root.append('g').attr('class', 'line-clip-compare').attr('id', id).attr('clip-path', 'url(#clip)').append('path').attr('class', 'line').style('fill', 'none').style('stroke', color).style('stroke-opacity', alpha).style('stroke-width', 1).style('stroke-dasharray', '30, 3').on('click', () => (0, _compass.ClickCompass)(target));
59
55
  return path;
60
56
  };
61
57
  exports.MountComparePath = MountComparePath;
62
- var MountThresLine = function MountThresLine(target, color) {
63
- var thresLineUp = target.root.append('g').attr('class', 'line-clip').attr('clip-path', 'url(#clip)').append('path').attr('class', 'thresholdUp').style('stroke-dasharray', '3, 3').style('fill', 'none').style('stroke', color).style('stroke-width', 1);
64
- var thresLineDw = target.root.append('g').attr('class', 'line-clip').attr('clip-path', 'url(#clip)').append('path').attr('class', 'thresholdDw').style('stroke-dasharray', '3, 3').style('fill', 'none').style('stroke', color).style('stroke-width', 1);
58
+ const MountThresLine = (target, color) => {
59
+ const thresLineUp = target.root.append('g').attr('class', 'line-clip').attr('clip-path', 'url(#clip)').append('path').attr('class', 'thresholdUp').style('stroke-dasharray', '3, 3').style('fill', 'none').style('stroke', color).style('stroke-width', 1);
60
+ const thresLineDw = target.root.append('g').attr('class', 'line-clip').attr('clip-path', 'url(#clip)').append('path').attr('class', 'thresholdDw').style('stroke-dasharray', '3, 3').style('fill', 'none').style('stroke', color).style('stroke-width', 1);
65
61
  return [thresLineUp, thresLineDw];
66
62
  };
67
63
  exports.MountThresLine = MountThresLine;
68
- var MountGrid = function MountGrid(target) {
69
- var gridTrans = "translate(0, ".concat(target.h, ")");
70
- var xGrid = target.root.append('g').attr('class', 'x-grid').attr('transform', gridTrans);
71
- var yGrid = target.root.append('g').attr('class', 'y-grid');
64
+ const MountGrid = target => {
65
+ const gridTrans = `translate(0, ${target.h})`;
66
+ const xGrid = target.root.append('g').attr('class', 'x-grid').attr('transform', gridTrans);
67
+ const yGrid = target.root.append('g').attr('class', 'y-grid');
72
68
  return {
73
69
  x: xGrid,
74
70
  y: yGrid
75
71
  };
76
72
  };
77
73
  exports.MountGrid = MountGrid;
78
- var MountAxis = function MountAxis(target) {
79
- var xAxisTrans = "translate(0, ".concat(target.h, ")");
80
- var xAxis = target.root.append('g').attr('class', 'x-axis').attr('transform', xAxisTrans);
81
- var yAxis = target.root.append('g').attr('class', 'y-axis');
74
+ const MountAxis = target => {
75
+ const xAxisTrans = `translate(0, ${target.h})`;
76
+ const xAxis = target.root.append('g').attr('class', 'x-axis').attr('transform', xAxisTrans);
77
+ const yAxis = target.root.append('g').attr('class', 'y-axis');
82
78
  return {
83
79
  x: xAxis,
84
80
  y: yAxis
85
81
  };
86
82
  };
87
83
  exports.MountAxis = MountAxis;
88
- var MountAxisLabelX = function MountAxisLabelX(target) {
89
- var xTrans = "translate(".concat(target.w / 2, ", ").concat(target.h + 30, ")");
84
+ const MountAxisLabelX = target => {
85
+ const xTrans = `translate(${target.w / 2}, ${target.h + 30})`;
90
86
  target.root.append('text').attr('text-anchor', 'middle').attr('transform', xTrans).attr('class', 'xLabel').attr('font-family', 'Helvetica').style('font-size', '12px');
91
87
  };
92
88
  exports.MountAxisLabelX = MountAxisLabelX;
93
- var MountAxisLabelY = function MountAxisLabelY(target) {
94
- var yR = 'rotate(-90)';
95
- var yTrans = "translate(".concat(16 - target.margin.l, ", ").concat(target.h / 2, ") ").concat(yR);
89
+ const MountAxisLabelY = target => {
90
+ const yR = 'rotate(-90)';
91
+ const yTrans = `translate(${16 - target.margin.l}, ${target.h / 2}) ${yR}`;
96
92
  target.root.append('text').attr('text-anchor', 'middle').attr('transform', yTrans).attr('class', 'yLabel').attr('font-family', 'Helvetica').style('font-size', '12px');
97
93
  };
98
94
  exports.MountAxisLabelY = MountAxisLabelY;
99
- var MountMarker = function MountMarker(target, color) {
100
- var tTrans = "translate(".concat(target.w - 80, ", -10)");
101
- var lTrans = "translate(".concat(target.w - 200, ", -18)");
95
+ const MountMarker = (target, color) => {
96
+ const tTrans = `translate(${target.w - 80}, -10)`;
97
+ const lTrans = `translate(${target.w - 200}, -18)`;
102
98
  target.root.append('text').attr('text-anchor', 'middle').attr('transform', tTrans).attr('class', 'mark-text').attr('font-family', 'Helvetica');
103
99
  target.root.append('rect').attr('transform', lTrans).attr('width', 30).attr('height', 5).attr('class', 'mark-line').style('fill', color);
104
100
  };
105
101
  exports.MountMarker = MountMarker;
106
- var MountClip = function MountClip(target) {
102
+ const MountClip = target => {
107
103
  target.svg.append('defs').append('clipPath').attr('id', 'clip').append('rect').attr('width', target.w).attr('height', target.h).attr('x', 0).attr('y', 0);
108
104
  };
109
105
  exports.MountClip = MountClip;
110
- var MountMainFrame = function MountMainFrame(target, name) {
111
- var transFrame = "translate(".concat(target.margin.l, ", ").concat(target.margin.t, ")");
112
- var clsName = "".concat(name, "-main");
106
+ const MountMainFrame = (target, name) => {
107
+ const transFrame = `translate(${target.margin.l}, ${target.margin.t})`;
108
+ const clsName = `${name}-main`;
113
109
  target.svg.append('g').attr('class', clsName).attr('transform', transFrame);
114
110
  };
115
111
  exports.MountMainFrame = MountMainFrame;
@@ -1,45 +1,40 @@
1
1
  "use strict";
2
2
 
3
- var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
4
3
  Object.defineProperty(exports, "__esModule", {
5
4
  value: true
6
5
  });
7
6
  exports.mpyBasicPatterns = exports.groupInterval = exports.getInterval = void 0;
8
- var _toConsumableArray2 = _interopRequireDefault(require("@babel/runtime/helpers/toConsumableArray"));
9
- var mpyBasicPatterns = ['s', 'd', 't', 'q', 'quint', 'h', 'sept', 'o', 'n'];
10
- exports.mpyBasicPatterns = mpyBasicPatterns;
11
- var getInterval = function getInterval(peaks) {
12
- var itvs = [];
13
- for (var idx = 0; idx < peaks.length - 1; idx += 1) {
14
- var itv = Math.abs(peaks[idx + 1].x - peaks[idx].x);
15
- itvs = [].concat((0, _toConsumableArray2.default)(itvs), [itv]);
7
+ const mpyBasicPatterns = exports.mpyBasicPatterns = ['s', 'd', 't', 'q', 'quint', 'h', 'sept', 'o', 'n'];
8
+ const getInterval = peaks => {
9
+ let itvs = [];
10
+ for (let idx = 0; idx < peaks.length - 1; idx += 1) {
11
+ const itv = Math.abs(peaks[idx + 1].x - peaks[idx].x);
12
+ itvs = [...itvs, itv];
16
13
  }
17
14
  return itvs;
18
15
  };
19
16
  exports.getInterval = getInterval;
20
- var groupInterval = function groupInterval(itvs) {
21
- var gitvs = [];
22
- itvs.forEach(function (vv) {
23
- var applied = false;
24
- gitvs.forEach(function (gv, idx) {
17
+ const groupInterval = itvs => {
18
+ let gitvs = [];
19
+ itvs.forEach(vv => {
20
+ let applied = false;
21
+ gitvs.forEach((gv, idx) => {
25
22
  if (applied) return;
26
23
  if (Math.abs((gv.c - vv) / gv.c) <= 0.03) {
27
- var c = (gv.c * gv.es.length + vv) / (gv.es.length + 1);
28
- var es = [].concat((0, _toConsumableArray2.default)(gv.es), [vv]);
29
- gitvs = [].concat((0, _toConsumableArray2.default)(gitvs.filter(function (v, i) {
30
- return i !== idx;
31
- })), [{
32
- c: c,
33
- es: es
34
- }]);
24
+ const c = (gv.c * gv.es.length + vv) / (gv.es.length + 1);
25
+ const es = [...gv.es, vv];
26
+ gitvs = [...gitvs.filter((v, i) => i !== idx), {
27
+ c,
28
+ es
29
+ }];
35
30
  applied = true;
36
31
  }
37
32
  });
38
33
  if (!applied) {
39
- gitvs = [].concat((0, _toConsumableArray2.default)(gitvs), [{
34
+ gitvs = [...gitvs, {
40
35
  c: vv,
41
36
  es: [vv]
42
- }]);
37
+ }];
43
38
  }
44
39
  });
45
40
  return gitvs;
@@ -10,49 +10,42 @@ var _multiplicity = require("./multiplicity");
10
10
  var _multiplicity_verify_basic = require("./multiplicity_verify_basic");
11
11
  /* eslint-disable prefer-object-spread, default-param-last */
12
12
 
13
- var centerX = function centerX(ps, shift) {
14
- var pxs = ps.map(function (p) {
15
- return p.x;
16
- }).sort(function (a, b) {
17
- return a - b;
18
- });
19
- var centIdx = (ps.length - 1) / 2;
13
+ const centerX = (ps, shift) => {
14
+ const pxs = ps.map(p => p.x).sort((a, b) => a - b);
15
+ const centIdx = (ps.length - 1) / 2;
20
16
  if (centIdx < 0) return 0;
21
17
  return pxs[centIdx] - shift;
22
18
  };
23
- var calcMpyCenter = function calcMpyCenter(ps, shift, typ) {
24
- var count = ps.length;
25
- var avgX = ps.reduce(function (sum, nxt) {
26
- return sum + nxt.x;
27
- }, 0) / ps.length - shift;
19
+ const calcMpyCenter = (ps, shift, typ) => {
20
+ const count = ps.length;
21
+ const avgX = ps.reduce((sum, nxt) => sum + nxt.x, 0) / ps.length - shift;
28
22
  if (typ === 'm') return avgX;
29
23
  if (count % 2 === 0) return avgX;
30
24
  return centerX(ps, shift);
31
25
  };
32
26
  exports.calcMpyCenter = calcMpyCenter;
33
- var calcMpyJStr = function calcMpyJStr(js) {
27
+ const calcMpyJStr = js => {
34
28
  if (!Array.isArray(js) || js.length === 0) return ' - ';
35
- var cJ = js.map(function (j) {
36
- return j.toFixed(3);
37
- }).join(', ');
38
- return "".concat(cJ);
29
+ const cJ = js.map(j => j.toFixed(3)).join(', ');
30
+ return `${cJ}`;
39
31
  };
40
32
  exports.calcMpyJStr = calcMpyJStr;
41
- var calcMpyPeakWidth = function calcMpyPeakWidth(x, metaSt) {
42
- var _metaSt$peaks = metaSt.peaks,
43
- intervalL = _metaSt$peaks.intervalL,
44
- intervalR = _metaSt$peaks.intervalR,
45
- deltaX = _metaSt$peaks.deltaX;
46
- var idxL = null;
47
- intervalL.every(function (l, idx) {
33
+ const calcMpyPeakWidth = (x, metaSt) => {
34
+ const {
35
+ intervalL,
36
+ intervalR,
37
+ deltaX
38
+ } = metaSt.peaks;
39
+ let idxL = null;
40
+ intervalL.every((l, idx) => {
48
41
  if (l.x < x) {
49
42
  idxL = idx - 1;
50
43
  return false;
51
44
  }
52
45
  return true;
53
46
  });
54
- var idxR = null;
55
- intervalR.every(function (l, idx) {
47
+ let idxR = null;
48
+ intervalR.every((l, idx) => {
56
49
  if (l.x < x) {
57
50
  idxR = idx;
58
51
  return false;
@@ -62,43 +55,39 @@ var calcMpyPeakWidth = function calcMpyPeakWidth(x, metaSt) {
62
55
  if (!idxL || !idxR) return 10 * deltaX;
63
56
  return Math.abs(intervalL[idxL].x - intervalR[idxR].x);
64
57
  };
65
- var calcMpyCoup = function calcMpyCoup(pks, metaSt) {
58
+ const calcMpyCoup = (pks, metaSt) => {
66
59
  if (pks.length === 0) return {
67
60
  type: '',
68
61
  js: ''
69
62
  };
70
- var orderPks = pks.sort(function (a, b) {
71
- return b.x - a.x;
72
- });
73
- var observeFrequency = metaSt.peaks.observeFrequency;
74
- var peaks = orderPks.map(function (p) {
75
- return {
76
- x: p.x,
77
- intensity: p.y,
78
- width: calcMpyPeakWidth(p.x, metaSt)
79
- };
80
- });
81
- var signal = {
63
+ const orderPks = pks.sort((a, b) => b.x - a.x);
64
+ const {
65
+ observeFrequency
66
+ } = metaSt.peaks;
67
+ const peaks = orderPks.map(p => ({
68
+ x: p.x,
69
+ intensity: p.y,
70
+ width: calcMpyPeakWidth(p.x, metaSt)
71
+ }));
72
+ const signal = {
82
73
  nbPeaks: peaks.length,
83
74
  observe: observeFrequency,
84
75
  nucleus: '1H',
85
- peaks: peaks
76
+ peaks
86
77
  };
87
78
  _jAnalyzer.default.compilePattern(signal);
88
- var type = signal.multiplicity;
89
- var js = signal.nmrJs ? signal.nmrJs.map(function (j) {
90
- return j.coupling;
91
- }).sort() : [];
92
- var isTPCMatch = (0, _multiplicity_verify_basic.verifyTypePeakCount)(type, peaks);
79
+ const type = signal.multiplicity;
80
+ const js = signal.nmrJs ? signal.nmrJs.map(j => j.coupling).sort() : [];
81
+ const isTPCMatch = (0, _multiplicity_verify_basic.verifyTypePeakCount)(type, peaks);
93
82
  if (!isTPCMatch) return {
94
83
  type: 'm',
95
84
  js: []
96
85
  };
97
86
  if (['s', 'm'].indexOf(type) >= 0) return {
98
- type: type,
99
- js: js
87
+ type,
88
+ js
100
89
  };
101
- var oivs = (0, _multiplicity.getInterval)(orderPks);
90
+ const oivs = (0, _multiplicity.getInterval)(orderPks);
102
91
  if (type === 't') return (0, _multiplicity_verify_basic.verifyTypeT)(type, js, oivs, metaSt);
103
92
  if (type === 'q') return (0, _multiplicity_verify_basic.verifyTypeQ)(type, js, oivs, metaSt);
104
93
  if (type === 'quint') return (0, _multiplicity_verify_basic.verifyTypeQuint)(type, js, oivs, metaSt);
@@ -106,8 +95,8 @@ var calcMpyCoup = function calcMpyCoup(pks, metaSt) {
106
95
  if (type === 'sept') return (0, _multiplicity_verify_basic.verifyTypeSept)(type, js, oivs, metaSt);
107
96
  if (type === 'o') return (0, _multiplicity_verify_basic.verifyTypeO)(type, js, oivs, metaSt);
108
97
  return {
109
- type: type,
110
- js: js
98
+ type,
99
+ js
111
100
  };
112
101
  };
113
102
  exports.calcMpyCoup = calcMpyCoup;