@complat/react-spectra-editor 1.0.0-rc2 → 1.0.0-rc20.patch-1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (202) hide show
  1. package/README.md +16 -0
  2. package/dist/__tests__/fixtures/aif_jcamp_1.js +136 -0
  3. package/dist/__tests__/fixtures/aif_jcamp_2.js +122 -0
  4. package/dist/__tests__/fixtures/backup/nmr1h_a.js +3518 -0
  5. package/dist/__tests__/fixtures/backup/xrd_jcamp_1.js +10705 -0
  6. package/dist/__tests__/fixtures/cds_jcamp.js +861 -0
  7. package/dist/__tests__/fixtures/compare_ir_1_jcamp.js +585 -0
  8. package/dist/__tests__/fixtures/compare_ir_2_jcamp.js +515 -0
  9. package/dist/__tests__/fixtures/compare_uv_vis_jcamp.js +640 -0
  10. package/dist/__tests__/fixtures/cyclic_voltammetry_1.js +778 -0
  11. package/dist/__tests__/fixtures/cyclic_voltammetry_2.js +758 -0
  12. package/dist/__tests__/fixtures/cyclic_voltammetry_3.js +759 -0
  13. package/dist/__tests__/fixtures/dls_acf_jcamp.js +148 -0
  14. package/dist/__tests__/fixtures/dls_intensity_jcamp.js +151 -0
  15. package/dist/__tests__/fixtures/emissions_jcamp.js +883 -0
  16. package/dist/__tests__/fixtures/hplc_uvvis_jcamp.js +638 -0
  17. package/dist/__tests__/fixtures/hplc_uvvis_jcamp_2.js +221 -0
  18. package/dist/__tests__/fixtures/ir_jcamp.js +148 -0
  19. package/dist/__tests__/fixtures/ir_result.js +46 -0
  20. package/dist/__tests__/fixtures/ir_svg.js +8 -0
  21. package/dist/__tests__/fixtures/ms_jcamp.js +64 -0
  22. package/dist/__tests__/fixtures/nmr13c_dept_jcamp.js +3543 -0
  23. package/dist/__tests__/fixtures/nmr13c_jcamp.js +1229 -0
  24. package/dist/__tests__/fixtures/nmr15n_jcamp.js +7177 -0
  25. package/dist/__tests__/fixtures/nmr19f_jcamp.js +6560 -0
  26. package/dist/__tests__/fixtures/nmr1h_2_jcamp.js +2005 -0
  27. package/dist/__tests__/fixtures/nmr1h_jcamp.js +4516 -0
  28. package/dist/__tests__/fixtures/nmr29si_jcamp.js +3029 -0
  29. package/dist/__tests__/fixtures/nmr31p_jcamp.js +3418 -0
  30. package/dist/__tests__/fixtures/nmr_result.js +68 -0
  31. package/dist/__tests__/fixtures/nmr_svg.js +8 -0
  32. package/dist/__tests__/fixtures/phenylalanin.js +142 -0
  33. package/dist/__tests__/fixtures/qDescValue.js +65 -0
  34. package/dist/__tests__/fixtures/raman_jcamp.js +410 -0
  35. package/dist/__tests__/fixtures/sec_1_jcamp.js +425 -0
  36. package/dist/__tests__/fixtures/sec_2_jcamp.js +407 -0
  37. package/dist/__tests__/fixtures/sec_3_jcamp.js +408 -0
  38. package/dist/__tests__/fixtures/sec_4_jcamp.js +407 -0
  39. package/dist/__tests__/fixtures/tga_jcamp.js +4157 -0
  40. package/dist/__tests__/fixtures/uv_vis_jcamp.js +249 -0
  41. package/dist/__tests__/fixtures/xrd_jcamp_1.js +436 -0
  42. package/dist/__tests__/fixtures/xrd_jcamp_2.js +955 -0
  43. package/dist/__tests__/fixtures/xrd_jcamp_3.js +1871 -0
  44. package/dist/__tests__/units/components/panel/graph_selection.test.js +72 -0
  45. package/dist/__tests__/units/components/panel/peaks.test.js +87 -0
  46. package/dist/actions/curve.js +15 -14
  47. package/dist/actions/cyclic_voltammetry.js +40 -60
  48. package/dist/actions/edit_peak.js +8 -12
  49. package/dist/actions/forecast.js +16 -24
  50. package/dist/actions/integration.js +12 -18
  51. package/dist/actions/jcamp.js +16 -24
  52. package/dist/actions/layout.js +4 -6
  53. package/dist/actions/manager.js +20 -30
  54. package/dist/actions/meta.js +4 -6
  55. package/dist/actions/multiplicity.js +24 -36
  56. package/dist/actions/scan.js +12 -18
  57. package/dist/actions/shift.js +8 -12
  58. package/dist/actions/status.js +12 -18
  59. package/dist/actions/submit.js +16 -24
  60. package/dist/actions/threshold.js +20 -30
  61. package/dist/actions/ui.js +25 -31
  62. package/dist/actions/wavelength.js +4 -6
  63. package/dist/app.js +25 -23
  64. package/dist/components/cmd_bar/01_viewer.js +24 -34
  65. package/dist/components/cmd_bar/02_zoom.js +18 -28
  66. package/dist/components/cmd_bar/03_peak.js +50 -66
  67. package/dist/components/cmd_bar/04_integration.js +70 -84
  68. package/dist/components/cmd_bar/05_multiplicity.js +42 -56
  69. package/dist/components/cmd_bar/06_undo_redo.js +22 -36
  70. package/dist/components/cmd_bar/07_pecker.js +24 -34
  71. package/dist/components/cmd_bar/common.js +11 -7
  72. package/dist/components/cmd_bar/index.js +17 -23
  73. package/dist/components/cmd_bar/r01_layout.js +79 -56
  74. package/dist/components/cmd_bar/r02_scan.js +70 -87
  75. package/dist/components/cmd_bar/r03_threshold.js +54 -68
  76. package/dist/components/cmd_bar/r04_submit.js +71 -83
  77. package/dist/components/cmd_bar/r05_submit_btn.js +64 -72
  78. package/dist/components/cmd_bar/r06_predict_btn.js +142 -152
  79. package/dist/components/cmd_bar/r07_wavelength_btn.js +28 -36
  80. package/dist/components/cmd_bar/tri_btn.js +91 -113
  81. package/dist/components/common/chem.js +2 -3
  82. package/dist/components/common/comps.js +2 -2
  83. package/dist/components/common/draw.js +30 -11
  84. package/dist/components/d3_line/index.js +154 -176
  85. package/dist/components/d3_line/line_focus.js +595 -739
  86. package/dist/components/d3_multi/index.js +153 -174
  87. package/dist/components/d3_multi/multi_focus.js +725 -850
  88. package/dist/components/d3_rect/index.js +112 -134
  89. package/dist/components/d3_rect/rect_focus.js +163 -208
  90. package/dist/components/forecast/comps.js +60 -68
  91. package/dist/components/forecast/ir_comps.js +49 -56
  92. package/dist/components/forecast/ir_viewer.js +61 -68
  93. package/dist/components/forecast/nmr_comps.js +62 -72
  94. package/dist/components/forecast/nmr_viewer.js +59 -68
  95. package/dist/components/forecast/section_loading.js +39 -63
  96. package/dist/components/forecast_viewer.js +109 -119
  97. package/dist/components/multi_jcamps_viewer.js +97 -113
  98. package/dist/components/panel/compare.js +183 -192
  99. package/dist/components/panel/cyclic_voltamery_data.js +149 -165
  100. package/dist/components/panel/graph_selection.js +143 -132
  101. package/dist/components/panel/index.js +112 -144
  102. package/dist/components/panel/info.js +125 -132
  103. package/dist/components/panel/multiplicity.js +215 -223
  104. package/dist/components/panel/multiplicity_coupling.js +108 -136
  105. package/dist/components/panel/multiplicity_select.js +43 -51
  106. package/dist/components/panel/peaks.js +130 -132
  107. package/dist/constants/action_type.js +23 -39
  108. package/dist/constants/list_layout.js +7 -4
  109. package/dist/constants/list_shift.js +117 -103
  110. package/dist/constants/list_ui.js +3 -6
  111. package/dist/constants/list_wavelength.js +7 -8
  112. package/dist/fn.js +2 -3
  113. package/dist/helpers/brush.js +49 -65
  114. package/dist/helpers/calc.js +2 -4
  115. package/dist/helpers/carbonFeatures.js +22 -20
  116. package/dist/helpers/cfg.js +49 -67
  117. package/dist/helpers/chem.js +450 -393
  118. package/dist/helpers/compass.js +92 -83
  119. package/dist/helpers/converter.js +52 -65
  120. package/dist/helpers/extractParams.js +60 -52
  121. package/dist/helpers/extractPeaksEdit.js +29 -25
  122. package/dist/helpers/focus.js +2 -6
  123. package/dist/helpers/format.js +416 -361
  124. package/dist/helpers/init.js +41 -37
  125. package/dist/helpers/integration.js +18 -21
  126. package/dist/helpers/mount.js +57 -61
  127. package/dist/helpers/multiplicity.js +19 -24
  128. package/dist/helpers/multiplicity_calc.js +39 -50
  129. package/dist/helpers/multiplicity_complat.js +21 -47
  130. package/dist/helpers/multiplicity_manual.js +49 -55
  131. package/dist/helpers/multiplicity_verify_basic.js +108 -111
  132. package/dist/helpers/shift.js +15 -23
  133. package/dist/helpers/zoom.js +7 -11
  134. package/dist/index.js +680 -630
  135. package/dist/layer_content.js +40 -43
  136. package/dist/layer_init.js +162 -184
  137. package/dist/layer_prism.js +38 -41
  138. package/dist/reducers/index.js +2 -3
  139. package/dist/reducers/reducer_curve.js +35 -26
  140. package/dist/reducers/reducer_edit_peak.js +122 -98
  141. package/dist/reducers/reducer_forecast.js +57 -44
  142. package/dist/reducers/reducer_integration.js +135 -103
  143. package/dist/reducers/reducer_jcamp.js +49 -44
  144. package/dist/reducers/reducer_layout.js +5 -6
  145. package/dist/reducers/reducer_manager.js +5 -6
  146. package/dist/reducers/reducer_meta.js +5 -6
  147. package/dist/reducers/reducer_multiplicity.js +100 -77
  148. package/dist/reducers/reducer_scan.js +17 -20
  149. package/dist/reducers/reducer_shift.js +115 -70
  150. package/dist/reducers/reducer_simulation.js +7 -8
  151. package/dist/reducers/reducer_status.js +5 -6
  152. package/dist/reducers/reducer_submit.js +12 -15
  153. package/dist/reducers/reducer_threshold.js +5 -6
  154. package/dist/reducers/reducer_ui.js +5 -6
  155. package/dist/reducers/reducer_voltammetry.js +156 -96
  156. package/dist/reducers/reducer_wavelength.js +5 -6
  157. package/dist/reducers/undo_redo_config.js +3 -5
  158. package/dist/sagas/index.js +2 -15
  159. package/dist/sagas/saga_edit_peak.js +54 -68
  160. package/dist/sagas/saga_manager.js +86 -130
  161. package/dist/sagas/saga_meta.js +25 -31
  162. package/dist/sagas/saga_multi_entities.js +40 -103
  163. package/dist/sagas/saga_multiplicity.js +336 -406
  164. package/dist/sagas/saga_ui.js +296 -475
  165. package/dist/setupTests.js +8 -0
  166. package/dist/third_party/jAnalyzer.js +66 -67
  167. package/dist/third_party/peakInterval.js +34 -34
  168. package/package.json +14 -14
  169. package/dist/components/cmd_bar/03_peak_bk.js +0 -139
  170. package/dist/components/cmd_bar/04_integration_bk.js +0 -180
  171. package/dist/components/cmd_bar/05_multiplicity_bk.js +0 -131
  172. package/dist/components/cmd_bar/r01_layout_bk.js +0 -186
  173. package/dist/components/cmd_bar/r06_predict_btn_bk.js +0 -220
  174. package/dist/components/d3_line/line_focus_bk.js +0 -825
  175. package/dist/components/d3_multi/index_bk.js +0 -210
  176. package/dist/components/d3_multi/multi_focus_bk.js +0 -533
  177. package/dist/components/panel/compare_bk.js +0 -256
  178. package/dist/components/panel/cyclic_voltamery_data_bk.js +0 -292
  179. package/dist/components/panel/index_bk.js +0 -178
  180. package/dist/components/panel/info_bk.js +0 -235
  181. package/dist/components/panel/multiplicity_bk.js +0 -280
  182. package/dist/helpers/carbonFeatures_bk.js +0 -45
  183. package/dist/helpers/cfg_bk.js +0 -80
  184. package/dist/helpers/chem_bk.js +0 -787
  185. package/dist/helpers/compass_bk.js +0 -149
  186. package/dist/helpers/converter_bk.js +0 -96
  187. package/dist/helpers/extractPeaksEdit_bk.js +0 -53
  188. package/dist/helpers/format_bk.js +0 -497
  189. package/dist/index_bk.js +0 -640
  190. package/dist/layer_content_bk.js +0 -105
  191. package/dist/layer_init_bk.js +0 -235
  192. package/dist/layer_prism_bk.js +0 -133
  193. package/dist/reducers/reducer_edit_peak_bk.js +0 -108
  194. package/dist/reducers/reducer_integration_bk.js +0 -134
  195. package/dist/reducers/reducer_jcamp_bk.js +0 -71
  196. package/dist/reducers/reducer_multiplicity_bk.js +0 -126
  197. package/dist/reducers/reducer_shift_bk.js +0 -88
  198. package/dist/reducers/reducer_voltammetry_bk.js +0 -287
  199. package/dist/sagas/saga_edit_peak_bk.js +0 -73
  200. package/dist/sagas/saga_multi_entities_bk.js +0 -106
  201. package/dist/sagas/saga_multiplicity_bk.js +0 -351
  202. package/dist/sagas/saga_ui_bk.js +0 -453
package/README.md CHANGED
@@ -2,6 +2,8 @@
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  An editor to View and Edit Chemical Spectra data (NMR, IR and MS).
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+ ![Testing](https://github.com/ComPlat/react-spectra-editor/actions/workflows/testing.yml/badge.svg)
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+
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  ### Usage
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  #### Installing from npm
@@ -35,3 +37,17 @@ $ yarn start
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  [demo & step-by-step manual](https://github.com/ComPlat/react-spectra-editor/blob/master/DEMO_MANUAL.md)
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+
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+
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+ ## Acknowledgments
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+
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+ This project has been funded by the **[DFG]**.
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+
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+ [![DFG Logo]][DFG]
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+
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+
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+ Funded by the [Deutsche Forschungsgemeinschaft (DFG, German Research Foundation)](https://www.dfg.de/) under the [National Research Data Infrastructure – NFDI4Chem](https://nfdi4chem.de/) – Projektnummer **441958208** since 2020.
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+
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+
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+ [DFG]: https://www.dfg.de/en/
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+ [DFG Logo]: https://www.dfg.de/zentralablage/bilder/service/logos_corporate_design/logo_negativ_267.png
@@ -0,0 +1,136 @@
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+ "use strict";
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+
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+ Object.defineProperty(exports, "__esModule", {
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+ value: true
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+ });
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+ exports.default = void 0;
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+ const aifJcamp1 = `
8
+ ##TITLE=Spectrum
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+ ##JCAMP-DX=5.00 $$ chemotion-converter-app (0.1.0)
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+ ##DATA TYPE=SORPTION-DESORPTION MEASUREMENT
11
+ ##DATA CLASS=XYDATA
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+ ##ORIGIN=
13
+ ##OWNER=
14
+ ##XUNITS=p/p0
15
+ ##YUNITS=ml/g
16
+ ##OPERATOR=Volodymyr
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+ ##DATE=2020-04-30T00:00:00
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+ ##SERIAL=BEL 00218
19
+ ##ADSORPTIVE=CH4
20
+ ##TEMPERATURE=384.15
21
+ ##AMOUNT=0.00980
22
+ ##SAMPLE_CID=aus der BOX
23
+ ##SAMPLE_MAT_ID=DUT-140(Cu)
24
+ ##SOFTWARE=raw2aif
25
+ ##SOFTWARE_VERSION=v004
26
+ ##FIRSTX=0.000213204381723083
27
+ ##LASTX=0.9634757722293498
28
+ ##MINX=0.000213204381723083
29
+ ##MAXX=0.9634757722293498
30
+ ##MINY=10.631
31
+ ##MAXY=1481.2
32
+ ##NPOINTS=96
33
+ ##FIRSTY=10.631
34
+ ##XUNITS=p/p0
35
+ ##YUNITS=ml/g
36
+ ##XYDATA=(XY..XY)
37
+ 0.000213204381723083, 10.631
38
+ 0.0008993091878022303, 66.609
39
+ 0.0016908121977696636, 120.28
40
+ 0.002905260041448732, 170.14
41
+ 0.004614526793644528, 214.69
42
+ 0.008697226882463239, 282.5
43
+ 0.012181979670383893, 322.52
44
+ 0.016622915227474586, 360.27
45
+ 0.022689233198460477, 401.55
46
+ 0.024416263692884636, 412.09
47
+ 0.030442119806572587, 445.23
48
+ 0.03634757722293497, 475.88
49
+ 0.037632487910786536, 482.6
50
+ 0.04695253133326754, 528.34
51
+ 0.049001282936938714, 538.13
52
+ 0.05896378170334551, 588.18
53
+ 0.06089213460969111, 598.56
54
+ 0.06715878811803021, 632.29
55
+ 0.0724217901904668, 664.8
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+ 0.0735468271982631, 673.66
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+ 0.12681338201914535, 551.43
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+ 0.13605052797789402, 552.89
59
+ 0.14818908516727525, 554.89
60
+ 0.16031777361097405, 557.43
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+ 0.17252541202013225, 559.16
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+ 0.1847034441922432, 560.83
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+ 0.19691108260140136, 562.66
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+ 0.20912858975624196, 563.62
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+ 0.2334353103720517, 566.49
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+ 0.2578111122076384, 569.8
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+ 0.3063456034737985, 576.8
73
+ 0.3184742919174973, 577.93
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+ 0.33048455541300703, 580.66
75
+ 0.34253429389124646, 583.42
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+ 0.3546728510806277, 586.22
77
+ 0.3664363959340768, 590.5
78
+ 0.37840718444685684, 595.32
79
+ 0.3900621730977993, 602.39
80
+ 0.4011052995164315, 612.81
81
+ 0.4143294187308793, 644.21
82
+ 0.425175170235863, 680.11
83
+ 0.43460969110826014, 719.33
84
+ 0.43827099575643935, 737.27
85
+ 0.4470245731767492, 774.86
86
+ 0.45003454060988846, 794.41
87
+ 0.4586795618276917, 834.82
88
+ 0.46289351623408664, 862.67
89
+ 0.4716865686371262, 897.89
90
+ 0.4746669298332182, 916.08
91
+ 0.4841804006710747, 949.07
92
+ 0.48683509325964675, 967.72
93
+ 0.4977992697128195, 1006.3
94
+ 0.5086055462350735, 1041.7
95
+ 0.5107766702852068, 1051.9
96
+ 0.5232310273364256, 1084.8
97
+ 0.5350833909010165, 1108.9
98
+ 0.5475377479522353, 1130.8
99
+ 0.5602289548998323, 1151.2
100
+ 0.5729596368301589, 1170.2
101
+ 0.5835685384387644, 1182.7
102
+ 0.5969900325668608, 1201.7
103
+ 0.6076778841409257, 1215.4
104
+ 0.6213362281654002, 1234.2
105
+ 0.6324583045494918, 1246.5
106
+ 0.6460376986085068, 1265.7
107
+ 0.6567650251653014, 1277.2
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+ 0.6686568637126221, 1290.4
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+ 0.6803414586006118, 1305.8
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+ 0.6943649462153361, 1327.4
111
+ 0.7055363663278398, 1338.5
112
+ 0.7174676798578901, 1353.9
113
+ 0.7297937432152374, 1364.5
114
+ 0.7422875752491858, 1376.9
115
+ 0.7547814072831344, 1386.7
116
+ 0.767117339386164, 1395.1
117
+ 0.7788019342741538, 1404.7
118
+ 0.7906542978387447, 1415.0
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+ 0.8027040363169841, 1425.7
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+ 0.8154445869929933, 1433.9
121
+ 0.827898944044212, 1442.2
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+ 0.8404322510608901, 1449.0
123
+ 0.8528471331293792, 1454.4
124
+ 0.8653409651633278, 1458.8
125
+ 0.8776275535379454, 1462.7
126
+ 0.8899240106582453, 1466.3
127
+ 0.9024178426921937, 1469.2
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+ 0.9143886312049738, 1473.3
129
+ 0.9270403631698411, 1473.8
130
+ 0.9390506266653508, 1476.2
131
+ 0.9511003651435903, 1479.6
132
+ 0.9634757722293498, 1481.2
133
+ ##END=$$ End of the data block
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+
135
+ `;
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+ var _default = exports.default = aifJcamp1;
@@ -0,0 +1,122 @@
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+ "use strict";
2
+
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+ Object.defineProperty(exports, "__esModule", {
4
+ value: true
5
+ });
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+ exports.default = void 0;
7
+ const aifJcamp2 = `
8
+ ##TITLE=Spectrum
9
+ ##JCAMP-DX=5.00 $$ chemotion-converter-app (0.1.0)
10
+ ##DATA TYPE=SORPTION-DESORPTION MEASUREMENT
11
+ ##DATA CLASS=XYDATA
12
+ ##ORIGIN=
13
+ ##OWNER=
14
+ ##XUNITS=p/p0
15
+ ##YUNITS=ml/g
16
+ ##OPERATOR=Volodymyr
17
+ ##DATE=2020-04-30T00:00:00
18
+ ##SERIAL=BEL 00218
19
+ ##ADSORPTIVE=CH4
20
+ ##AMOUNT=0.00980
21
+ ##SAMPLE_CID=aus der BOX
22
+ ##SAMPLE_MAT_ID=DUT-140(Cu)
23
+ ##SOFTWARE=raw2aif
24
+ ##SOFTWARE_VERSION=v004
25
+ ##FIRSTX=0.9562025066614033
26
+ ##LASTX=0.0013190565479127604
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+ 0.0013190565479127604, 383.81
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+ ##END=$$ End of the data block
119
+
120
+
121
+ `;
122
+ var _default = exports.default = aifJcamp2;