@cleocode/core 2026.4.13 → 2026.4.15

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (918) hide show
  1. package/dist/hooks/payload-schemas.d.ts +1 -1
  2. package/dist/hooks/payload-schemas.d.ts.map +1 -1
  3. package/dist/index.js +71866 -175
  4. package/dist/index.js.map +7 -1
  5. package/dist/init.d.ts.map +1 -1
  6. package/dist/internal.d.ts +16 -5
  7. package/dist/internal.d.ts.map +1 -1
  8. package/dist/memory/brain-embedding.d.ts +1 -1
  9. package/dist/memory/embedding-local.d.ts +8 -3
  10. package/dist/memory/embedding-local.d.ts.map +1 -1
  11. package/dist/memory/embedding-worker.d.ts +1 -1
  12. package/dist/memory/learnings.d.ts +2 -2
  13. package/dist/memory/patterns.d.ts +6 -6
  14. package/dist/store/agent-registry-accessor.d.ts +54 -1
  15. package/dist/store/agent-registry-accessor.d.ts.map +1 -1
  16. package/dist/store/backup-crypto.d.ts +89 -0
  17. package/dist/store/backup-crypto.d.ts.map +1 -0
  18. package/dist/store/backup-pack.d.ts +91 -0
  19. package/dist/store/backup-pack.d.ts.map +1 -0
  20. package/dist/store/backup-unpack.d.ts +140 -0
  21. package/dist/store/backup-unpack.d.ts.map +1 -0
  22. package/dist/store/migrate-signaldock-to-conduit.d.ts.map +1 -1
  23. package/dist/store/nexus-validation-schemas.d.ts +1 -1
  24. package/dist/store/nexus-validation-schemas.d.ts.map +1 -1
  25. package/dist/store/regenerators.d.ts +126 -0
  26. package/dist/store/regenerators.d.ts.map +1 -0
  27. package/dist/store/restore-conflict-report.d.ts +118 -0
  28. package/dist/store/restore-conflict-report.d.ts.map +1 -0
  29. package/dist/store/restore-json-merge.d.ts +187 -0
  30. package/dist/store/restore-json-merge.d.ts.map +1 -0
  31. package/dist/store/sqlite-backup.d.ts +60 -5
  32. package/dist/store/sqlite-backup.d.ts.map +1 -1
  33. package/dist/store/t310-readiness.d.ts +83 -0
  34. package/dist/store/t310-readiness.d.ts.map +1 -0
  35. package/dist/store/validation-schemas.d.ts +1 -1
  36. package/dist/store/validation-schemas.d.ts.map +1 -1
  37. package/package.json +11 -11
  38. package/src/__tests__/cli-parity.test.ts +19 -14
  39. package/src/__tests__/human-output.test.ts +13 -11
  40. package/src/hooks/payload-schemas.ts +1 -1
  41. package/src/init.ts +18 -8
  42. package/src/internal.ts +4 -1
  43. package/src/memory/__tests__/brain-automation.test.ts +2 -2
  44. package/src/memory/brain-embedding.ts +1 -1
  45. package/src/memory/embedding-local.ts +10 -5
  46. package/src/memory/embedding-worker.ts +1 -1
  47. package/src/skills/__tests__/discovery.test.ts +22 -7
  48. package/src/store/__tests__/performance-safety.test.ts +11 -5
  49. package/src/store/migrate-signaldock-to-conduit.ts +14 -7
  50. package/src/store/nexus-validation-schemas.ts +3 -3
  51. package/src/store/validation-schemas.ts +3 -3
  52. package/src/validation/protocols/_shared.ts +1 -1
  53. package/dist/adapters/adapter-registry.js +0 -64
  54. package/dist/adapters/adapter-registry.js.map +0 -1
  55. package/dist/adapters/discovery.js +0 -83
  56. package/dist/adapters/discovery.js.map +0 -1
  57. package/dist/adapters/index.js +0 -9
  58. package/dist/adapters/index.js.map +0 -1
  59. package/dist/adapters/manager.js +0 -260
  60. package/dist/adapters/manager.js.map +0 -1
  61. package/dist/admin/export-tasks.js +0 -171
  62. package/dist/admin/export-tasks.js.map +0 -1
  63. package/dist/admin/export.js +0 -103
  64. package/dist/admin/export.js.map +0 -1
  65. package/dist/admin/help.js +0 -106
  66. package/dist/admin/help.js.map +0 -1
  67. package/dist/admin/import-tasks.js +0 -182
  68. package/dist/admin/import-tasks.js.map +0 -1
  69. package/dist/admin/import.js +0 -129
  70. package/dist/admin/import.js.map +0 -1
  71. package/dist/admin/index.js +0 -13
  72. package/dist/admin/index.js.map +0 -1
  73. package/dist/adrs/find.js +0 -134
  74. package/dist/adrs/find.js.map +0 -1
  75. package/dist/adrs/index.js +0 -15
  76. package/dist/adrs/index.js.map +0 -1
  77. package/dist/adrs/link-pipeline.js +0 -160
  78. package/dist/adrs/link-pipeline.js.map +0 -1
  79. package/dist/adrs/list.js +0 -43
  80. package/dist/adrs/list.js.map +0 -1
  81. package/dist/adrs/parse.js +0 -51
  82. package/dist/adrs/parse.js.map +0 -1
  83. package/dist/adrs/show.js +0 -22
  84. package/dist/adrs/show.js.map +0 -1
  85. package/dist/adrs/sync.js +0 -188
  86. package/dist/adrs/sync.js.map +0 -1
  87. package/dist/adrs/types.js +0 -9
  88. package/dist/adrs/types.js.map +0 -1
  89. package/dist/adrs/validate.js +0 -57
  90. package/dist/adrs/validate.js.map +0 -1
  91. package/dist/agents/agent-registry.js +0 -288
  92. package/dist/agents/agent-registry.js.map +0 -1
  93. package/dist/agents/agent-schema.js +0 -82
  94. package/dist/agents/agent-schema.js.map +0 -1
  95. package/dist/agents/capacity.js +0 -116
  96. package/dist/agents/capacity.js.map +0 -1
  97. package/dist/agents/execution-learning.js +0 -474
  98. package/dist/agents/execution-learning.js.map +0 -1
  99. package/dist/agents/health-monitor.js +0 -217
  100. package/dist/agents/health-monitor.js.map +0 -1
  101. package/dist/agents/index.js +0 -29
  102. package/dist/agents/index.js.map +0 -1
  103. package/dist/agents/registry.js +0 -314
  104. package/dist/agents/registry.js.map +0 -1
  105. package/dist/agents/retry.js +0 -215
  106. package/dist/agents/retry.js.map +0 -1
  107. package/dist/audit-prune.js +0 -94
  108. package/dist/audit-prune.js.map +0 -1
  109. package/dist/audit.js +0 -68
  110. package/dist/audit.js.map +0 -1
  111. package/dist/backfill/index.js +0 -229
  112. package/dist/backfill/index.js.map +0 -1
  113. package/dist/bootstrap.js +0 -344
  114. package/dist/bootstrap.js.map +0 -1
  115. package/dist/caamp/adapter.js +0 -259
  116. package/dist/caamp/adapter.js.map +0 -1
  117. package/dist/caamp/capability-check.js +0 -38
  118. package/dist/caamp/capability-check.js.map +0 -1
  119. package/dist/caamp/index.js +0 -21
  120. package/dist/caamp/index.js.map +0 -1
  121. package/dist/caamp-init.js +0 -16
  122. package/dist/caamp-init.js.map +0 -1
  123. package/dist/cleo.js +0 -322
  124. package/dist/cleo.js.map +0 -1
  125. package/dist/code/index.js +0 -10
  126. package/dist/code/index.js.map +0 -1
  127. package/dist/code/outline.js +0 -165
  128. package/dist/code/outline.js.map +0 -1
  129. package/dist/code/parser.js +0 -295
  130. package/dist/code/parser.js.map +0 -1
  131. package/dist/code/search.js +0 -135
  132. package/dist/code/search.js.map +0 -1
  133. package/dist/code/unfold.js +0 -155
  134. package/dist/code/unfold.js.map +0 -1
  135. package/dist/codebase-map/analyzers/architecture.js +0 -129
  136. package/dist/codebase-map/analyzers/architecture.js.map +0 -1
  137. package/dist/codebase-map/analyzers/concerns.js +0 -122
  138. package/dist/codebase-map/analyzers/concerns.js.map +0 -1
  139. package/dist/codebase-map/analyzers/conventions.js +0 -149
  140. package/dist/codebase-map/analyzers/conventions.js.map +0 -1
  141. package/dist/codebase-map/analyzers/integrations.js +0 -108
  142. package/dist/codebase-map/analyzers/integrations.js.map +0 -1
  143. package/dist/codebase-map/analyzers/stack.js +0 -117
  144. package/dist/codebase-map/analyzers/stack.js.map +0 -1
  145. package/dist/codebase-map/analyzers/structure.js +0 -137
  146. package/dist/codebase-map/analyzers/structure.js.map +0 -1
  147. package/dist/codebase-map/analyzers/testing.js +0 -118
  148. package/dist/codebase-map/analyzers/testing.js.map +0 -1
  149. package/dist/codebase-map/index.js +0 -57
  150. package/dist/codebase-map/index.js.map +0 -1
  151. package/dist/codebase-map/store.js +0 -122
  152. package/dist/codebase-map/store.js.map +0 -1
  153. package/dist/codebase-map/summary.js +0 -152
  154. package/dist/codebase-map/summary.js.map +0 -1
  155. package/dist/compliance/index.js +0 -288
  156. package/dist/compliance/index.js.map +0 -1
  157. package/dist/compliance/protocol-enforcement.js +0 -332
  158. package/dist/compliance/protocol-enforcement.js.map +0 -1
  159. package/dist/compliance/protocol-rules.js +0 -786
  160. package/dist/compliance/protocol-rules.js.map +0 -1
  161. package/dist/compliance/protocol-types.js +0 -79
  162. package/dist/compliance/protocol-types.js.map +0 -1
  163. package/dist/compliance/store.js +0 -53
  164. package/dist/compliance/store.js.map +0 -1
  165. package/dist/conduit/conduit-client.js +0 -107
  166. package/dist/conduit/conduit-client.js.map +0 -1
  167. package/dist/conduit/factory.js +0 -52
  168. package/dist/conduit/factory.js.map +0 -1
  169. package/dist/conduit/http-transport.js +0 -155
  170. package/dist/conduit/http-transport.js.map +0 -1
  171. package/dist/conduit/index.js +0 -15
  172. package/dist/conduit/index.js.map +0 -1
  173. package/dist/conduit/local-transport.js +0 -255
  174. package/dist/conduit/local-transport.js.map +0 -1
  175. package/dist/conduit/sse-transport.js +0 -299
  176. package/dist/conduit/sse-transport.js.map +0 -1
  177. package/dist/config/build-config.js +0 -29
  178. package/dist/config/build-config.js.map +0 -1
  179. package/dist/config.js +0 -400
  180. package/dist/config.js.map +0 -1
  181. package/dist/constants.js +0 -18
  182. package/dist/constants.js.map +0 -1
  183. package/dist/context/index.js +0 -137
  184. package/dist/context/index.js.map +0 -1
  185. package/dist/crypto/credentials.js +0 -191
  186. package/dist/crypto/credentials.js.map +0 -1
  187. package/dist/discovery.js +0 -182
  188. package/dist/discovery.js.map +0 -1
  189. package/dist/engine-result.js +0 -12
  190. package/dist/engine-result.js.map +0 -1
  191. package/dist/error-catalog.js +0 -404
  192. package/dist/error-catalog.js.map +0 -1
  193. package/dist/error-registry.js +0 -393
  194. package/dist/error-registry.js.map +0 -1
  195. package/dist/errors.js +0 -173
  196. package/dist/errors.js.map +0 -1
  197. package/dist/hooks/handlers/agent-hooks.js +0 -106
  198. package/dist/hooks/handlers/agent-hooks.js.map +0 -1
  199. package/dist/hooks/handlers/context-hooks.js +0 -111
  200. package/dist/hooks/handlers/context-hooks.js.map +0 -1
  201. package/dist/hooks/handlers/error-hooks.js +0 -52
  202. package/dist/hooks/handlers/error-hooks.js.map +0 -1
  203. package/dist/hooks/handlers/file-hooks.js +0 -104
  204. package/dist/hooks/handlers/file-hooks.js.map +0 -1
  205. package/dist/hooks/handlers/handler-helpers.js +0 -61
  206. package/dist/hooks/handlers/handler-helpers.js.map +0 -1
  207. package/dist/hooks/handlers/index.js +0 -28
  208. package/dist/hooks/handlers/index.js.map +0 -1
  209. package/dist/hooks/handlers/memory-bridge-refresh.js +0 -42
  210. package/dist/hooks/handlers/memory-bridge-refresh.js.map +0 -1
  211. package/dist/hooks/handlers/notification-hooks.js +0 -62
  212. package/dist/hooks/handlers/notification-hooks.js.map +0 -1
  213. package/dist/hooks/handlers/session-hooks.js +0 -142
  214. package/dist/hooks/handlers/session-hooks.js.map +0 -1
  215. package/dist/hooks/handlers/task-hooks.js +0 -65
  216. package/dist/hooks/handlers/task-hooks.js.map +0 -1
  217. package/dist/hooks/handlers/work-capture-hooks.js +0 -165
  218. package/dist/hooks/handlers/work-capture-hooks.js.map +0 -1
  219. package/dist/hooks/index.js +0 -13
  220. package/dist/hooks/index.js.map +0 -1
  221. package/dist/hooks/payload-schemas.js +0 -220
  222. package/dist/hooks/payload-schemas.js.map +0 -1
  223. package/dist/hooks/provider-hooks.js +0 -66
  224. package/dist/hooks/provider-hooks.js.map +0 -1
  225. package/dist/hooks/registry.js +0 -229
  226. package/dist/hooks/registry.js.map +0 -1
  227. package/dist/hooks/types.js +0 -66
  228. package/dist/hooks/types.js.map +0 -1
  229. package/dist/hooks.js +0 -136
  230. package/dist/hooks.js.map +0 -1
  231. package/dist/init.js +0 -851
  232. package/dist/init.js.map +0 -1
  233. package/dist/inject/index.js +0 -82
  234. package/dist/inject/index.js.map +0 -1
  235. package/dist/injection.js +0 -343
  236. package/dist/injection.js.map +0 -1
  237. package/dist/intelligence/adaptive-validation.js +0 -497
  238. package/dist/intelligence/adaptive-validation.js.map +0 -1
  239. package/dist/intelligence/impact.js +0 -675
  240. package/dist/intelligence/impact.js.map +0 -1
  241. package/dist/intelligence/index.js +0 -22
  242. package/dist/intelligence/index.js.map +0 -1
  243. package/dist/intelligence/patterns.js +0 -492
  244. package/dist/intelligence/patterns.js.map +0 -1
  245. package/dist/intelligence/prediction.js +0 -499
  246. package/dist/intelligence/prediction.js.map +0 -1
  247. package/dist/intelligence/types.js +0 -13
  248. package/dist/intelligence/types.js.map +0 -1
  249. package/dist/internal.js +0 -306
  250. package/dist/internal.js.map +0 -1
  251. package/dist/issue/create.js +0 -121
  252. package/dist/issue/create.js.map +0 -1
  253. package/dist/issue/diagnostics.js +0 -59
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  258. package/dist/issue/template-parser.js.map +0 -1
  259. package/dist/json-schema-validator.js +0 -76
  260. package/dist/json-schema-validator.js.map +0 -1
  261. package/dist/lib/index.js +0 -11
  262. package/dist/lib/index.js.map +0 -1
  263. package/dist/lib/retry.js +0 -152
  264. package/dist/lib/retry.js.map +0 -1
  265. package/dist/lib/tree-sitter-languages.js +0 -71
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  267. package/dist/lifecycle/chain-composition.js +0 -152
  268. package/dist/lifecycle/chain-composition.js.map +0 -1
  269. package/dist/lifecycle/chain-store.js +0 -246
  270. package/dist/lifecycle/chain-store.js.map +0 -1
  271. package/dist/lifecycle/consolidate-rcasd.js +0 -352
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  273. package/dist/lifecycle/default-chain.js +0 -176
  274. package/dist/lifecycle/default-chain.js.map +0 -1
  275. package/dist/lifecycle/evidence.js +0 -180
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  279. package/dist/lifecycle/index.js +0 -756
  280. package/dist/lifecycle/index.js.map +0 -1
  281. package/dist/lifecycle/pipeline.js +0 -656
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  283. package/dist/lifecycle/rcasd-index.js +0 -326
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  297. package/dist/lifecycle/tessera-engine.js +0 -249
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@@ -1,151 +0,0 @@
1
- /**
2
- * Unified migration manager for SQLite databases.
3
- *
4
- * Consolidates duplicated reconciliation, bootstrap, retry, and column-safety
5
- * logic that was previously copy-pasted between sqlite.ts (tasks.db) and
6
- * brain-sqlite.ts (brain.db). Both modules now delegate to these shared functions.
7
- *
8
- * @task T132
9
- * @see https://github.com/anthropics/cleo/issues/82
10
- * @see https://github.com/anthropics/cleo/issues/63
11
- * @see https://github.com/anthropics/cleo/issues/65
12
- */
13
- import { copyFileSync, existsSync } from 'node:fs';
14
- import { readMigrationFiles } from 'drizzle-orm/migrator';
15
- import { migrate } from 'drizzle-orm/node-sqlite/migrator';
16
- import { getLogger } from '../logger.js';
17
- /** Migration retry constants for SQLITE_BUSY handling (T5185). */
18
- const MAX_MIGRATION_RETRIES = 5;
19
- const MIGRATION_RETRY_BASE_DELAY_MS = 100;
20
- const MIGRATION_RETRY_MAX_DELAY_MS = 2000;
21
- /**
22
- * Check whether a table exists in a SQLite database.
23
- */
24
- export function tableExists(nativeDb, tableName) {
25
- const result = nativeDb
26
- .prepare("SELECT name FROM sqlite_master WHERE type='table' AND name=?")
27
- .get(tableName);
28
- return !!result;
29
- }
30
- /**
31
- * Check if an error is a SQLite BUSY error (database locked by another process).
32
- * node:sqlite throws native Error with message containing the SQLite error code.
33
- * @task T5185
34
- */
35
- export function isSqliteBusy(err) {
36
- if (!(err instanceof Error))
37
- return false;
38
- const msg = err.message.toLowerCase();
39
- return msg.includes('sqlite_busy') || msg.includes('database is locked');
40
- }
41
- /**
42
- * Create a pre-migration safety backup of the database file.
43
- *
44
- * Only creates the backup once (idempotent). Non-fatal on failure.
45
- */
46
- export function createSafetyBackup(dbPath) {
47
- const backupPath = dbPath.replace(/\.db$/, '-pre-cleo.db.bak');
48
- if (!existsSync(backupPath)) {
49
- try {
50
- copyFileSync(dbPath, backupPath);
51
- }
52
- catch {
53
- /* non-fatal */
54
- }
55
- }
56
- }
57
- /**
58
- * Bootstrap and reconcile the Drizzle migration journal.
59
- *
60
- * Handles three scenarios:
61
- * 1. Tables exist but no __drizzle_migrations — bootstrap baseline as applied
62
- * 2. Journal has orphaned hashes (from older CLEO version) — clear and re-mark all as applied
63
- * 3. Journal is healthy — no-op
64
- *
65
- * @param nativeDb - Native SQLite database handle
66
- * @param migrationsFolder - Path to the drizzle migrations folder
67
- * @param existenceTable - A table name used to detect if the DB has data (e.g., 'tasks' or 'brain_decisions')
68
- * @param logSubsystem - Logger subsystem name for reconciliation warnings
69
- */
70
- export function reconcileJournal(nativeDb, migrationsFolder, existenceTable, logSubsystem) {
71
- // Scenario 1: Tables exist but no migration journal — bootstrap baseline
72
- if (tableExists(nativeDb, existenceTable) && !tableExists(nativeDb, '__drizzle_migrations')) {
73
- const migrations = readMigrationFiles({ migrationsFolder });
74
- const baseline = migrations[0];
75
- if (baseline) {
76
- nativeDb.exec(`
77
- CREATE TABLE IF NOT EXISTS "__drizzle_migrations" (
78
- id SERIAL PRIMARY KEY,
79
- hash text NOT NULL,
80
- created_at numeric
81
- )
82
- `);
83
- nativeDb.exec(`INSERT INTO "__drizzle_migrations" ("hash", "created_at") VALUES ('${baseline.hash}', ${baseline.folderMillis})`);
84
- }
85
- }
86
- // Scenario 2: Journal has orphaned entries from a previous CLEO version
87
- if (tableExists(nativeDb, '__drizzle_migrations') && tableExists(nativeDb, existenceTable)) {
88
- const localMigrations = readMigrationFiles({ migrationsFolder });
89
- const localHashes = new Set(localMigrations.map((m) => m.hash));
90
- const dbEntries = nativeDb.prepare('SELECT hash FROM "__drizzle_migrations"').all();
91
- const hasOrphanedEntries = dbEntries.some((e) => !localHashes.has(e.hash));
92
- if (hasOrphanedEntries) {
93
- const log = getLogger(logSubsystem);
94
- log.warn({ orphaned: dbEntries.filter((e) => !localHashes.has(e.hash)).length }, `Detected stale migration journal entries from a previous CLEO version. Reconciling.`);
95
- nativeDb.exec('DELETE FROM "__drizzle_migrations"');
96
- for (const m of localMigrations) {
97
- nativeDb.exec(`INSERT INTO "__drizzle_migrations" ("hash", "created_at") VALUES ('${m.hash}', ${m.folderMillis})`);
98
- }
99
- }
100
- }
101
- }
102
- /**
103
- * Run Drizzle migrations with SQLITE_BUSY retry and exponential backoff.
104
- *
105
- * @param db - Drizzle database instance
106
- * @param migrationsFolder - Path to the drizzle migrations folder
107
- */
108
- // biome-ignore lint/suspicious/noExplicitAny: Drizzle's NodeSQLiteDatabase is generic — accepting any schema avoids coupling to a specific schema type
109
- export function migrateWithRetry(db, migrationsFolder) {
110
- for (let attempt = 1; attempt <= MAX_MIGRATION_RETRIES; attempt++) {
111
- try {
112
- migrate(db, { migrationsFolder });
113
- return;
114
- }
115
- catch (err) {
116
- if (!isSqliteBusy(err) || attempt === MAX_MIGRATION_RETRIES) {
117
- throw err;
118
- }
119
- const delay = Math.min(MIGRATION_RETRY_BASE_DELAY_MS * 2 ** (attempt - 1) * (1 + Math.random() * 0.5), MIGRATION_RETRY_MAX_DELAY_MS);
120
- Atomics.wait(new Int32Array(new SharedArrayBuffer(4)), 0, 0, Math.round(delay));
121
- }
122
- }
123
- }
124
- /**
125
- * Ensure all required columns exist on a table.
126
- *
127
- * Uses PRAGMA table_info to inspect the schema and adds any missing columns
128
- * via ALTER TABLE ADD COLUMN. Safety net for databases where Drizzle migrations
129
- * could not run due to journal corruption or version skew.
130
- *
131
- * @param nativeDb - Native SQLite database handle
132
- * @param tableName - Table to check (e.g., 'tasks')
133
- * @param requiredColumns - Columns that must exist
134
- * @param logSubsystem - Logger subsystem name
135
- */
136
- export function ensureColumns(nativeDb, tableName, requiredColumns, logSubsystem) {
137
- if (!tableExists(nativeDb, tableName))
138
- return;
139
- if (requiredColumns.length === 0)
140
- return;
141
- const columns = nativeDb.prepare(`PRAGMA table_info(${tableName})`).all();
142
- const existingCols = new Set(columns.map((c) => c.name));
143
- for (const req of requiredColumns) {
144
- if (!existingCols.has(req.name)) {
145
- const log = getLogger(logSubsystem);
146
- log.warn({ column: req.name }, `Adding missing column ${tableName}.${req.name} via ALTER TABLE`);
147
- nativeDb.exec(`ALTER TABLE ${tableName} ADD COLUMN ${req.name} ${req.ddl}`);
148
- }
149
- }
150
- }
151
- //# sourceMappingURL=migration-manager.js.map
@@ -1 +0,0 @@
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