xml_jats_resolver 0.1.0 → 0.2.0

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Files changed (203) hide show
  1. checksums.yaml +4 -4
  2. data/CHANGELOG.md +4 -0
  3. data/lib/dtd/atypon/3.0.1/dtd/XHTMLtablesetup3.ent +284 -0
  4. data/lib/dtd/atypon/3.0.1/dtd/annotation3.ent +266 -0
  5. data/lib/dtd/atypon/3.0.1/dtd/articlemeta3.ent +1368 -0
  6. data/lib/dtd/atypon/3.0.1/dtd/atypon-archivearticle3.dtd +636 -0
  7. data/lib/dtd/atypon/3.0.1/dtd/atypon-archivecustom-classes3.ent +178 -0
  8. data/lib/dtd/atypon/3.0.1/dtd/atypon-archivecustom-mixes3.ent +253 -0
  9. data/lib/dtd/atypon/3.0.1/dtd/atypon-archivecustom-models3.ent +987 -0
  10. data/lib/dtd/atypon/3.0.1/dtd/atypon-archivecustom-modules3.ent +140 -0
  11. data/lib/dtd/atypon/3.0.1/dtd/atypon-elements.ent +207 -0
  12. data/lib/dtd/atypon/3.0.1/dtd/backmatter3.ent +275 -0
  13. data/lib/dtd/atypon/3.0.1/dtd/base-test3.dtd +714 -0
  14. data/lib/dtd/atypon/3.0.1/dtd/catalog-v3.xml +618 -0
  15. data/lib/dtd/atypon/3.0.1/dtd/catalog.ent +163 -0
  16. data/lib/dtd/atypon/3.0.1/dtd/chars3.ent +365 -0
  17. data/lib/dtd/atypon/3.0.1/dtd/common3.ent +2771 -0
  18. data/lib/dtd/atypon/3.0.1/dtd/default-classes3.ent +785 -0
  19. data/lib/dtd/atypon/3.0.1/dtd/default-mixes3.ent +292 -0
  20. data/lib/dtd/atypon/3.0.1/dtd/display3.ent +799 -0
  21. data/lib/dtd/atypon/3.0.1/dtd/format3.ent +384 -0
  22. data/lib/dtd/atypon/3.0.1/dtd/funding3.ent +342 -0
  23. data/lib/dtd/atypon/3.0.1/dtd/htmltable.dtd +334 -0
  24. data/lib/dtd/atypon/3.0.1/dtd/iso8879/isobox.ent +61 -0
  25. data/lib/dtd/atypon/3.0.1/dtd/iso8879/isocyr1.ent +88 -0
  26. data/lib/dtd/atypon/3.0.1/dtd/iso8879/isocyr2.ent +47 -0
  27. data/lib/dtd/atypon/3.0.1/dtd/iso8879/isodia.ent +35 -0
  28. data/lib/dtd/atypon/3.0.1/dtd/iso8879/isolat1.ent +83 -0
  29. data/lib/dtd/atypon/3.0.1/dtd/iso8879/isolat2.ent +142 -0
  30. data/lib/dtd/atypon/3.0.1/dtd/iso8879/isonum.ent +97 -0
  31. data/lib/dtd/atypon/3.0.1/dtd/iso8879/isopub.ent +105 -0
  32. data/lib/dtd/atypon/3.0.1/dtd/iso9573-13/isoamsa.ent +167 -0
  33. data/lib/dtd/atypon/3.0.1/dtd/iso9573-13/isoamsb.ent +143 -0
  34. data/lib/dtd/atypon/3.0.1/dtd/iso9573-13/isoamsc.ent +43 -0
  35. data/lib/dtd/atypon/3.0.1/dtd/iso9573-13/isoamsn.ent +114 -0
  36. data/lib/dtd/atypon/3.0.1/dtd/iso9573-13/isoamso.ent +73 -0
  37. data/lib/dtd/atypon/3.0.1/dtd/iso9573-13/isoamsr.ent +204 -0
  38. data/lib/dtd/atypon/3.0.1/dtd/iso9573-13/isogrk3.ent +64 -0
  39. data/lib/dtd/atypon/3.0.1/dtd/iso9573-13/isomfrk.ent +75 -0
  40. data/lib/dtd/atypon/3.0.1/dtd/iso9573-13/isomopf.ent +49 -0
  41. data/lib/dtd/atypon/3.0.1/dtd/iso9573-13/isomscr.ent +75 -0
  42. data/lib/dtd/atypon/3.0.1/dtd/iso9573-13/isotech.ent +182 -0
  43. data/lib/dtd/atypon/3.0.1/dtd/issuexml.dtd +262 -0
  44. data/lib/dtd/atypon/3.0.1/dtd/journalmeta3.ent +278 -0
  45. data/lib/dtd/atypon/3.0.1/dtd/link3.ent +301 -0
  46. data/lib/dtd/atypon/3.0.1/dtd/list3.ent +314 -0
  47. data/lib/dtd/atypon/3.0.1/dtd/math3.ent +269 -0
  48. data/lib/dtd/atypon/3.0.1/dtd/mathml/mmlalias.ent +564 -0
  49. data/lib/dtd/atypon/3.0.1/dtd/mathml/mmlextra.ent +122 -0
  50. data/lib/dtd/atypon/3.0.1/dtd/mathml2-qname-1.mod +286 -0
  51. data/lib/dtd/atypon/3.0.1/dtd/mathml2.dtd +2206 -0
  52. data/lib/dtd/atypon/3.0.1/dtd/mathmlsetup3.ent +238 -0
  53. data/lib/dtd/atypon/3.0.1/dtd/modules3.ent +414 -0
  54. data/lib/dtd/atypon/3.0.1/dtd/nlmcitation3.ent +120 -0
  55. data/lib/dtd/atypon/3.0.1/dtd/notat3.ent +164 -0
  56. data/lib/dtd/atypon/3.0.1/dtd/oasis-exchange.ent +387 -0
  57. data/lib/dtd/atypon/3.0.1/dtd/oasis-tablesetup3.ent +261 -0
  58. data/lib/dtd/atypon/3.0.1/dtd/para3.ent +354 -0
  59. data/lib/dtd/atypon/3.0.1/dtd/phrase3.ent +332 -0
  60. data/lib/dtd/atypon/3.0.1/dtd/references3.ent +758 -0
  61. data/lib/dtd/atypon/3.0.1/dtd/related-object3.ent +130 -0
  62. data/lib/dtd/atypon/3.0.1/dtd/section3.ent +198 -0
  63. data/lib/dtd/atypon/3.0.1/dtd/xhtml-inlstyle-1.mod +34 -0
  64. data/lib/dtd/atypon/3.0.1/dtd/xhtml-table-1.mod +333 -0
  65. data/lib/dtd/atypon/3.0.1/dtd/xmlchars/isogrk1.ent +70 -0
  66. data/lib/dtd/atypon/3.0.1/dtd/xmlchars/isogrk2.ent +41 -0
  67. data/lib/dtd/atypon/3.0.1/dtd/xmlchars/isogrk4.ent +66 -0
  68. data/lib/dtd/atypon/3.0.1/dtd/xmlspecchars3.ent +300 -0
  69. data/lib/dtd/atypon/3.0.4/dtd/XHTMLtablesetup3.ent +284 -0
  70. data/lib/dtd/atypon/3.0.4/dtd/annotation3.ent +266 -0
  71. data/lib/dtd/atypon/3.0.4/dtd/articlemeta3.ent +1368 -0
  72. data/lib/dtd/atypon/3.0.4/dtd/atypon-archivearticle3.dtd +645 -0
  73. data/lib/dtd/atypon/3.0.4/dtd/atypon-archivecustom-classes3.ent +178 -0
  74. data/lib/dtd/atypon/3.0.4/dtd/atypon-archivecustom-mixes3.ent +253 -0
  75. data/lib/dtd/atypon/3.0.4/dtd/atypon-archivecustom-models3.ent +996 -0
  76. data/lib/dtd/atypon/3.0.4/dtd/atypon-archivecustom-modules3.ent +140 -0
  77. data/lib/dtd/atypon/3.0.4/dtd/atypon-elements.ent +201 -0
  78. data/lib/dtd/atypon/3.0.4/dtd/backmatter3.ent +275 -0
  79. data/lib/dtd/atypon/3.0.4/dtd/base-test3.dtd +714 -0
  80. data/lib/dtd/atypon/3.0.4/dtd/catalog-v3.xml +618 -0
  81. data/lib/dtd/atypon/3.0.4/dtd/catalog.ent +98 -0
  82. data/lib/dtd/atypon/3.0.4/dtd/chars3.ent +365 -0
  83. data/lib/dtd/atypon/3.0.4/dtd/common3.ent +2771 -0
  84. data/lib/dtd/atypon/3.0.4/dtd/default-classes3.ent +785 -0
  85. data/lib/dtd/atypon/3.0.4/dtd/default-mixes3.ent +292 -0
  86. data/lib/dtd/atypon/3.0.4/dtd/display3.ent +799 -0
  87. data/lib/dtd/atypon/3.0.4/dtd/format3.ent +384 -0
  88. data/lib/dtd/atypon/3.0.4/dtd/funding3.ent +342 -0
  89. data/lib/dtd/atypon/3.0.4/dtd/htmltable.dtd +334 -0
  90. data/lib/dtd/atypon/3.0.4/dtd/iso8879/isobox.ent +61 -0
  91. data/lib/dtd/atypon/3.0.4/dtd/iso8879/isocyr1.ent +88 -0
  92. data/lib/dtd/atypon/3.0.4/dtd/iso8879/isocyr2.ent +47 -0
  93. data/lib/dtd/atypon/3.0.4/dtd/iso8879/isodia.ent +35 -0
  94. data/lib/dtd/atypon/3.0.4/dtd/iso8879/isolat1.ent +83 -0
  95. data/lib/dtd/atypon/3.0.4/dtd/iso8879/isolat2.ent +142 -0
  96. data/lib/dtd/atypon/3.0.4/dtd/iso8879/isonum.ent +97 -0
  97. data/lib/dtd/atypon/3.0.4/dtd/iso8879/isopub.ent +105 -0
  98. data/lib/dtd/atypon/3.0.4/dtd/iso9573-13/isoamsa.ent +167 -0
  99. data/lib/dtd/atypon/3.0.4/dtd/iso9573-13/isoamsb.ent +143 -0
  100. data/lib/dtd/atypon/3.0.4/dtd/iso9573-13/isoamsc.ent +43 -0
  101. data/lib/dtd/atypon/3.0.4/dtd/iso9573-13/isoamsn.ent +114 -0
  102. data/lib/dtd/atypon/3.0.4/dtd/iso9573-13/isoamso.ent +73 -0
  103. data/lib/dtd/atypon/3.0.4/dtd/iso9573-13/isoamsr.ent +204 -0
  104. data/lib/dtd/atypon/3.0.4/dtd/iso9573-13/isogrk3.ent +64 -0
  105. data/lib/dtd/atypon/3.0.4/dtd/iso9573-13/isomfrk.ent +75 -0
  106. data/lib/dtd/atypon/3.0.4/dtd/iso9573-13/isomopf.ent +49 -0
  107. data/lib/dtd/atypon/3.0.4/dtd/iso9573-13/isomscr.ent +75 -0
  108. data/lib/dtd/atypon/3.0.4/dtd/iso9573-13/isotech.ent +182 -0
  109. data/lib/dtd/atypon/3.0.4/dtd/issuexml.dtd +266 -0
  110. data/lib/dtd/atypon/3.0.4/dtd/journalmeta3.ent +278 -0
  111. data/lib/dtd/atypon/3.0.4/dtd/link3.ent +301 -0
  112. data/lib/dtd/atypon/3.0.4/dtd/list3.ent +314 -0
  113. data/lib/dtd/atypon/3.0.4/dtd/math3.ent +269 -0
  114. data/lib/dtd/atypon/3.0.4/dtd/mathml/mmlalias.ent +564 -0
  115. data/lib/dtd/atypon/3.0.4/dtd/mathml/mmlextra.ent +122 -0
  116. data/lib/dtd/atypon/3.0.4/dtd/mathml2-qname-1.mod +286 -0
  117. data/lib/dtd/atypon/3.0.4/dtd/mathml2.dtd +2206 -0
  118. data/lib/dtd/atypon/3.0.4/dtd/mathmlsetup3.ent +238 -0
  119. data/lib/dtd/atypon/3.0.4/dtd/modules3.ent +414 -0
  120. data/lib/dtd/atypon/3.0.4/dtd/nlmcitation3.ent +120 -0
  121. data/lib/dtd/atypon/3.0.4/dtd/notat3.ent +164 -0
  122. data/lib/dtd/atypon/3.0.4/dtd/oasis-exchange.ent +387 -0
  123. data/lib/dtd/atypon/3.0.4/dtd/oasis-tablesetup3.ent +261 -0
  124. data/lib/dtd/atypon/3.0.4/dtd/para3.ent +354 -0
  125. data/lib/dtd/atypon/3.0.4/dtd/phrase3.ent +332 -0
  126. data/lib/dtd/atypon/3.0.4/dtd/references3.ent +758 -0
  127. data/lib/dtd/atypon/3.0.4/dtd/related-object3.ent +130 -0
  128. data/lib/dtd/atypon/3.0.4/dtd/section3.ent +198 -0
  129. data/lib/dtd/atypon/3.0.4/dtd/xhtml-inlstyle-1.mod +34 -0
  130. data/lib/dtd/atypon/3.0.4/dtd/xhtml-table-1.mod +333 -0
  131. data/lib/dtd/atypon/3.0.4/dtd/xmlchars/isogrk1.ent +70 -0
  132. data/lib/dtd/atypon/3.0.4/dtd/xmlchars/isogrk2.ent +41 -0
  133. data/lib/dtd/atypon/3.0.4/dtd/xmlchars/isogrk4.ent +66 -0
  134. data/lib/dtd/atypon/3.0.4/dtd/xmlspecchars3.ent +300 -0
  135. data/lib/dtd/atypon/3.0.5/dtd/XHTMLtablesetup3.ent +284 -0
  136. data/lib/dtd/atypon/3.0.5/dtd/annotation3.ent +266 -0
  137. data/lib/dtd/atypon/3.0.5/dtd/articlemeta3.ent +1368 -0
  138. data/lib/dtd/atypon/3.0.5/dtd/atypon-archivearticle3.dtd +645 -0
  139. data/lib/dtd/atypon/3.0.5/dtd/atypon-archivecustom-classes3.ent +178 -0
  140. data/lib/dtd/atypon/3.0.5/dtd/atypon-archivecustom-mixes3.ent +253 -0
  141. data/lib/dtd/atypon/3.0.5/dtd/atypon-archivecustom-models3.ent +996 -0
  142. data/lib/dtd/atypon/3.0.5/dtd/atypon-archivecustom-modules3.ent +140 -0
  143. data/lib/dtd/atypon/3.0.5/dtd/atypon-elements.ent +201 -0
  144. data/lib/dtd/atypon/3.0.5/dtd/backmatter3.ent +275 -0
  145. data/lib/dtd/atypon/3.0.5/dtd/base-test3.dtd +714 -0
  146. data/lib/dtd/atypon/3.0.5/dtd/catalog-v3.xml +618 -0
  147. data/lib/dtd/atypon/3.0.5/dtd/catalog.ent +98 -0
  148. data/lib/dtd/atypon/3.0.5/dtd/chars3.ent +365 -0
  149. data/lib/dtd/atypon/3.0.5/dtd/common3.ent +2771 -0
  150. data/lib/dtd/atypon/3.0.5/dtd/default-classes3.ent +785 -0
  151. data/lib/dtd/atypon/3.0.5/dtd/default-mixes3.ent +292 -0
  152. data/lib/dtd/atypon/3.0.5/dtd/display3.ent +799 -0
  153. data/lib/dtd/atypon/3.0.5/dtd/format3.ent +384 -0
  154. data/lib/dtd/atypon/3.0.5/dtd/funding3.ent +342 -0
  155. data/lib/dtd/atypon/3.0.5/dtd/htmltable.dtd +334 -0
  156. data/lib/dtd/atypon/3.0.5/dtd/iso8879/isobox.ent +61 -0
  157. data/lib/dtd/atypon/3.0.5/dtd/iso8879/isocyr1.ent +88 -0
  158. data/lib/dtd/atypon/3.0.5/dtd/iso8879/isocyr2.ent +47 -0
  159. data/lib/dtd/atypon/3.0.5/dtd/iso8879/isodia.ent +35 -0
  160. data/lib/dtd/atypon/3.0.5/dtd/iso8879/isolat1.ent +83 -0
  161. data/lib/dtd/atypon/3.0.5/dtd/iso8879/isolat2.ent +142 -0
  162. data/lib/dtd/atypon/3.0.5/dtd/iso8879/isonum.ent +97 -0
  163. data/lib/dtd/atypon/3.0.5/dtd/iso8879/isopub.ent +105 -0
  164. data/lib/dtd/atypon/3.0.5/dtd/iso9573-13/isoamsa.ent +167 -0
  165. data/lib/dtd/atypon/3.0.5/dtd/iso9573-13/isoamsb.ent +143 -0
  166. data/lib/dtd/atypon/3.0.5/dtd/iso9573-13/isoamsc.ent +43 -0
  167. data/lib/dtd/atypon/3.0.5/dtd/iso9573-13/isoamsn.ent +114 -0
  168. data/lib/dtd/atypon/3.0.5/dtd/iso9573-13/isoamso.ent +73 -0
  169. data/lib/dtd/atypon/3.0.5/dtd/iso9573-13/isoamsr.ent +204 -0
  170. data/lib/dtd/atypon/3.0.5/dtd/iso9573-13/isogrk3.ent +64 -0
  171. data/lib/dtd/atypon/3.0.5/dtd/iso9573-13/isomfrk.ent +75 -0
  172. data/lib/dtd/atypon/3.0.5/dtd/iso9573-13/isomopf.ent +49 -0
  173. data/lib/dtd/atypon/3.0.5/dtd/iso9573-13/isomscr.ent +75 -0
  174. data/lib/dtd/atypon/3.0.5/dtd/iso9573-13/isotech.ent +182 -0
  175. data/lib/dtd/atypon/3.0.5/dtd/issuexml.dtd +262 -0
  176. data/lib/dtd/atypon/3.0.5/dtd/journalmeta3.ent +278 -0
  177. data/lib/dtd/atypon/3.0.5/dtd/link3.ent +301 -0
  178. data/lib/dtd/atypon/3.0.5/dtd/list3.ent +314 -0
  179. data/lib/dtd/atypon/3.0.5/dtd/math3.ent +269 -0
  180. data/lib/dtd/atypon/3.0.5/dtd/mathml/mmlalias.ent +564 -0
  181. data/lib/dtd/atypon/3.0.5/dtd/mathml/mmlextra.ent +122 -0
  182. data/lib/dtd/atypon/3.0.5/dtd/mathml2-qname-1.mod +286 -0
  183. data/lib/dtd/atypon/3.0.5/dtd/mathml2.dtd +2206 -0
  184. data/lib/dtd/atypon/3.0.5/dtd/mathmlsetup3.ent +238 -0
  185. data/lib/dtd/atypon/3.0.5/dtd/modules3.ent +414 -0
  186. data/lib/dtd/atypon/3.0.5/dtd/nlmcitation3.ent +120 -0
  187. data/lib/dtd/atypon/3.0.5/dtd/notat3.ent +164 -0
  188. data/lib/dtd/atypon/3.0.5/dtd/oasis-exchange.ent +387 -0
  189. data/lib/dtd/atypon/3.0.5/dtd/oasis-tablesetup3.ent +261 -0
  190. data/lib/dtd/atypon/3.0.5/dtd/para3.ent +354 -0
  191. data/lib/dtd/atypon/3.0.5/dtd/phrase3.ent +332 -0
  192. data/lib/dtd/atypon/3.0.5/dtd/references3.ent +758 -0
  193. data/lib/dtd/atypon/3.0.5/dtd/related-object3.ent +130 -0
  194. data/lib/dtd/atypon/3.0.5/dtd/section3.ent +198 -0
  195. data/lib/dtd/atypon/3.0.5/dtd/xhtml-inlstyle-1.mod +34 -0
  196. data/lib/dtd/atypon/3.0.5/dtd/xhtml-table-1.mod +333 -0
  197. data/lib/dtd/atypon/3.0.5/dtd/xmlchars/isogrk1.ent +70 -0
  198. data/lib/dtd/atypon/3.0.5/dtd/xmlchars/isogrk2.ent +41 -0
  199. data/lib/dtd/atypon/3.0.5/dtd/xmlchars/isogrk4.ent +66 -0
  200. data/lib/dtd/atypon/3.0.5/dtd/xmlspecchars3.ent +300 -0
  201. data/lib/xml_jats_resolver.rb +3 -0
  202. data/xml_jats_resolver.gemspec +1 -1
  203. metadata +200 -2
@@ -0,0 +1,140 @@
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+ <!-- ============================================================= -->
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+ <!-- MODULE: Journal Archiving DTD-Specific Modules -->
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+ <!-- VERSION: 3.0 -->
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+ <!-- DATE: Apr 2009 -->
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+ <!-- -->
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+ <!-- ============================================================= -->
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+
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+ <!-- ============================================================= -->
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+ <!-- PUBLIC DOCUMENT TYPE DEFINITION -->
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+ <!-- TYPICAL INVOCATION -->
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+ <!--
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+ "-//Atypon//DTD Atypon Systems Archival NLM DTD-Specific Modules v3.0.5 20110520//EN"
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+ Delivered as file "atypon-archivecustom-modules3.ent" -->
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+ <!-- ============================================================= -->
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+
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+ <!-- ============================================================= -->
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+ <!-- SYSTEM: Archiving and Interchange DTD Suite -->
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+ <!-- -->
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+ <!-- PURPOSE: To name any modules created explicitly for this -->
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+ <!-- DTD, that is, not present in the Archiving and -->
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+ <!-- Interchange DTD Suite -->
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+ <!-- -->
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+ <!-- CONTAINS: 1) Full external Parameter Entity declarations -->
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+ <!-- for all DTD-specific modules (Note: the -->
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+ <!-- modules are declared here but referenced in -->
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+ <!-- the DTD.) -->
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+ <!-- -->
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+ <!-- CREATED FOR: -->
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+ <!-- Digital Archive of Journal Articles -->
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+ <!-- National Center for Biotechnology Information -->
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+ <!-- (NCBI) -->
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+ <!-- National Library of Medicine (NLM) -->
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+ <!-- -->
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+ <!-- ORIGINAL CREATION DATE: -->
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+ <!-- August 2004 -->
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+ <!-- -->
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+ <!-- CREATED BY: Deborah Lapeyre (Mulberry Technologies, Inc.) -->
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+ <!-- B. Tommie Usdin (Mulberry Technologies, Inc.) -->
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+ <!-- -->
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+ <!-- Suggestions for refinements and enhancements to -->
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+ <!-- this DTD should be sent in email to: -->
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+ <!-- archive-dtd@ncbi.nlm.nih.gov -->
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+ <!-- ============================================================= -->
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+
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+
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+ <!-- ============================================================= -->
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+ <!-- DTD VERSION/CHANGE HISTORY -->
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+ <!-- ============================================================= -->
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+ <!--
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+
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+ Version Reason/Occasion (who) vx.x (yyyy-mm-dd)
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+
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+ =============================================================
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+ Version 3.0 (DAL/BTU) v3.0 (2007-10-31)
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+
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+ Version 3.0 is the first non-backward-compatible release.
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+ In addition to the usual incremental changes, some
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+ elements and attributes have been renamed and/or remodeled
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+ to better meet user needs and to increase tag set consistency.
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+ All module change histories are available through the Tag Suite
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+ web site at http://dtd.nlm.nih.gov.
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+
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+ Details on version 3.0 are available at
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+ http://dtd.nlm.nih.gov/3.0.
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+
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+ 1. Updated public identifier to "v3.0 20080202//EN" -->
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+
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+
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+ <!-- ============================================================= -->
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+ <!-- CUSTOMIZATION MODULES DECLARED -->
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+ <!-- ============================================================= -->
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+
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+
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+ <!-- DTD-SPECIFIC CLASS CUSTOMIZATIONS MODULE -->
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+ <!-- Set up the Parameter Entities and element
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+ class definitions that will be used to
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+ over-ride some element classes in the
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+ DTD Suite. -->
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+ <!ENTITY % archivecustom-classes.ent
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+ PUBLIC
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+ "-//Atypon//DTD Atypon Systems Archival NLM DTD Customize Classes Module v3.0.5 20110520//EN"
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+ "atypon-archivecustom-classes3.ent" >
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+
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+
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+ <!-- DTD-SPECIFIC MIX CUSTOMIZATIONS MODULE -->
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+ <!-- Set up the Parameter Entities and element
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+ mix definitions that will be used to
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+ over-ride some element mixes in the DTD
89
+ Suite. -->
90
+ <!ENTITY % archivecustom-mixes.ent
91
+ PUBLIC
92
+ "-//Atypon//DTD Atypon Systems Archival NLM DTD Customize Mixes Module v3.0.5 20110520//EN"
93
+ "atypon-archivecustom-mixes3.ent" >
94
+
95
+
96
+ <!-- DTD-SPECIFIC MODELS/ATTRIBUTES CUSTOMIZATIONS
97
+ MODULE -->
98
+ <!-- Set up the Parameter Entities for element-
99
+ specific element groups, complete content
100
+ models, and attribute list and value over-
101
+ rides. These PEs will over-ride selected
102
+ content models and attribute lists for the
103
+ Journal Archiving and Interchange DTD Suite-->
104
+ <!ENTITY % archivecustom-models.ent
105
+ PUBLIC
106
+ "-//Atypon//DTD Atypon Systems Archival NLM DTD Customize Content and Attributes Module v3.0.5 20110520//EN"
107
+ "atypon-archivecustom-models3.ent" >
108
+
109
+
110
+ <!-- NLM CITATION MODULE -->
111
+ <!-- The only new element created for the
112
+ Publishing DTD, the highly structured NLM
113
+ citation, to enforce a slightly loose version
114
+ of an NLM-structured bibliographic reference.
115
+ Sequence is enforced and interior punctuation
116
+ is expected to be generated. -->
117
+ <!ENTITY % nlmcitation.ent
118
+ PUBLIC
119
+ "-//Atypon//DTD Atypon Systems Archival NLM DTD v3.0.5 20110520//EN"
120
+ "nlmcitation3.ent" >
121
+
122
+
123
+ <!-- ============================================================= -->
124
+ <!-- ATYPON-SPECIFIC ELEMENT MODULES DECLARED -->
125
+ <!-- ============================================================= -->
126
+
127
+
128
+ <!-- ATYPON-SPECIFIC ELEMENTS -->
129
+ <!-- Includes a collection of elements added
130
+ by Atypon to support features required
131
+ by the application or requested by Atypon's
132
+ clients and not directly provided by the
133
+ NLM Tag Suite. -->
134
+ <!ENTITY % atypon-elements.ent
135
+ PUBLIC
136
+ "-//Atypon//DTD Atypon Systems Archival NLM DTD Atypon Element Classes Module v3.0.5 20110520//EN"
137
+ "atypon-elements.ent" >
138
+
139
+
140
+ <!-- =================== End Archive DTD Module of Modules ======= -->
@@ -0,0 +1,201 @@
1
+ <!-- ============================================================= -->
2
+ <!-- MODULE: Journal Archiving DTD Atypon Element Classes -->
3
+ <!-- VERSION: 3.0 -->
4
+ <!-- DATE: Apr 2009 -->
5
+ <!-- -->
6
+ <!-- ============================================================= -->
7
+
8
+ <!-- ============================================================= -->
9
+ <!-- PUBLIC DOCUMENT TYPE DEFINITION -->
10
+ <!-- TYPICAL INVOCATION -->
11
+ <!--
12
+ "-//Atypon//DTD Atypon Systems Archival NLM DTD Atypon Element Classes Module v3.0.5 20110520//EN"
13
+ Delivered as file "atypon-elements.ent" -->
14
+ <!-- ============================================================= -->
15
+
16
+
17
+ <!-- ============================================================= -->
18
+ <!-- SYSTEM: Journal Archiving and Interchange DTD of the -->
19
+ <!-- Archiving and Interchange DTD Suite -->
20
+ <!-- -->
21
+ <!-- PURPOSE: To declare the Parameter Entities (PEs) used to -->
22
+ <!-- over-ride the named element classes -->
23
+ <!-- -->
24
+ <!-- Note: Since PEs must be declared before they -->
25
+ <!-- are used, this module must be called before the -->
26
+ <!-- content modules that declare elements, and before -->
27
+ <!-- the default classes module. -->
28
+ <!-- -->
29
+ <!-- CONTAINS: 1) PEs for changing the contents of the default -->
30
+ <!-- element classes -->
31
+ <!-- -->
32
+ <!-- CREATED FOR: -->
33
+ <!-- Digital Archive of Journal Articles -->
34
+ <!-- National Center for Biotechnology Information -->
35
+ <!-- (NCBI) -->
36
+ <!-- National Library of Medicine (NLM) -->
37
+ <!-- -->
38
+ <!-- ORIGINAL CREATION DATE: -->
39
+ <!-- August 2004 -->
40
+ <!-- -->
41
+ <!-- CREATED BY: Deborah Lapeyre (Mulberry Technologies, Inc.) -->
42
+ <!-- B. Tommie Usdin (Mulberry Technologies, Inc.) -->
43
+ <!-- -->
44
+ <!-- Suggestions for refinements and enhancements to -->
45
+ <!-- this DTD should be sent in email to: -->
46
+ <!-- archive-dtd@ncbi.nlm.nih.gov -->
47
+ <!-- ============================================================= -->
48
+
49
+
50
+ <!-- ============================================================= -->
51
+ <!-- DTD VERSION/CHANGE HISTORY -->
52
+ <!-- ============================================================= -->
53
+ <!--
54
+
55
+ Version Reason/Occasion (who) vx.x (yyyy-mm-dd)
56
+
57
+ =============================================================
58
+ Version 3.0 (DAL/BTU) v3.0 (2007-10-31)
59
+
60
+ Version 3.0 is the first non-backward-compatible release.
61
+ In addition to the usual incremental changes, some
62
+ elements and attributes have been renamed and/or remodeled
63
+ to better meet user needs and to increase tag set consistency.
64
+ All module change histories are available through the Tag Suite
65
+ web site at http://dtd.nlm.nih.gov.
66
+
67
+ Details on version 3.0 are available at
68
+ http://dtd.nlm.nih.gov/3.0.
69
+
70
+ 1. Updated public identifier to "v3.0 20080202//EN" -->
71
+
72
+
73
+ <!-- ============================================================= -->
74
+ <!-- METADATA CLASSES -->
75
+ <!-- ============================================================= -->
76
+
77
+ <!-- BBOX -->
78
+ <!-- Bounding Box Coordinates Element -->
79
+ <!-- Atypon internal use only (Reserved) -->
80
+ <!ENTITY % bbox-atts
81
+ "pg CDATA #REQUIRED
82
+ x CDATA #REQUIRED
83
+ y CDATA #REQUIRED
84
+ w CDATA #REQUIRED
85
+ h CDATA #REQUIRED
86
+ words CDATA #IMPLIED" >
87
+
88
+ <!ELEMENT bbox EMPTY >
89
+
90
+ <!ATTLIST bbox
91
+ %bbox-atts; >
92
+
93
+
94
+ <!-- ============================================================= -->
95
+ <!-- EXAM ACCREDITATION INFORMATION ELEMENTS -->
96
+ <!-- ============================================================= -->
97
+
98
+ <!-- EXAM ACCREDITATION ELEMENTS -->
99
+ <!-- Used to record the accreditation organization
100
+ and credit hours earned after successful
101
+ completion of the exam contained in the
102
+ article. Used only for online exams. -->
103
+ <!ENTITY % accreditation-model
104
+ "(accred-org-name, max-credit-hours)" >
105
+
106
+ <!ELEMENT accreditation %accreditation-model; >
107
+
108
+ <!ELEMENT accred-org-name (#PCDATA) >
109
+
110
+ <!ELEMENT max-credit-hours (#PCDATA) >
111
+ <!-- max-credit-hours Specifies whether correct answers
112
+ are required to earn the specified
113
+ credit hours -->
114
+ <!ATTLIST max-credit-hours
115
+ correct-answers-required (yes | no) #REQUIRED >
116
+
117
+
118
+ <!-- ============================================================= -->
119
+ <!-- EXAM ELEMENTS -->
120
+ <!-- ============================================================= -->
121
+
122
+ <!-- QUESTION ATTRIBUTES -->
123
+ <!-- Attribute list for Question element -->
124
+ <!ENTITY % question-atts
125
+ "id ID #IMPLIED
126
+ xml:lang NMTOKEN #IMPLIED">
127
+
128
+
129
+ <!-- QUESTION -->
130
+ <!-- A question structure used in an exam -->
131
+ <!ELEMENT question (%sec-opt-title-model;, answer+,
132
+ explanation?) >
133
+ <!-- id Unique identifier, so the Question can be
134
+ referenced
135
+ xml:lang The language in which the value of the
136
+ element is expressed. Recommended best
137
+ practice is to use values as defined in
138
+ RFC 1766, typically 2-letter language
139
+ codes such as "FR" (French), "EN" (English),
140
+ and "DE" (German). These values are NOT
141
+ case sensitive, so "EN" = "en". The values
142
+ may include hyphenated differentiations such
143
+ as "EN-AU" (Australian English) and "EN-US"
144
+ (United States English) -->
145
+ <!ATTLIST question
146
+ %question-atts; >
147
+
148
+ <!-- ANSWER ATTRIBUTES -->
149
+ <!-- Attribute list for Answer element -->
150
+ <!ENTITY % answer-atts
151
+ "id ID #IMPLIED
152
+ xml:lang NMTOKEN #IMPLIED
153
+ correct (yes|no) #IMPLIED" >
154
+
155
+ <!-- ANSWER -->
156
+ <!-- An answer element to an exam question -->
157
+ <!ELEMENT answer %sec-opt-title-model; >
158
+ <!-- id Unique identifier, so the Answer can be
159
+ referenced
160
+ xml:lang The language in which the value of the
161
+ element is expressed. Recommended best
162
+ practice is to use values as defined in
163
+ RFC 1766, typically 2-letter language
164
+ codes such as "FR" (French), "EN" (English),
165
+ and "DE" (German). These values are NOT
166
+ case sensitive, so "EN" = "en". The values
167
+ may include hyphenated differentiations such
168
+ as "EN-AU" (Australian English) and "EN-US"
169
+ (United States English)
170
+ correct Indicates whether this answer is the correct
171
+ one. The attribute has a default value of
172
+ "no" -->
173
+ <!ATTLIST answer
174
+ %answer-atts; >
175
+
176
+ <!-- EXPLANATION ATTRIBUTES -->
177
+ <!-- Attribute list for Explanation element -->
178
+ <!ENTITY % explanation-atts
179
+ "id ID #IMPLIED
180
+ xml:lang NMTOKEN #IMPLIED" >
181
+
182
+ <!-- EXPLANATION -->
183
+ <!-- An explanation to an exam answer -->
184
+ <!ELEMENT explanation %sec-opt-title-model; >
185
+ <!-- id Unique identifier, so the Explanation can be
186
+ referenced
187
+ xml:lang The language in which the value of the
188
+ element is expressed. Recommended best
189
+ practice is to use values as defined in
190
+ RFC 1766, typically 2-letter language
191
+ codes such as "FR" (French), "EN" (English),
192
+ and "DE" (German). These values are NOT
193
+ case sensitive, so "EN" = "en". The values
194
+ may include hyphenated differentiations such
195
+ as "EN-AU" (Australian English) and "EN-US"
196
+ (United States English) -->
197
+ <!ATTLIST explanation
198
+ %explanation-atts; >
199
+
200
+
201
+ <!-- ================== End Atypon Element Classes =============== -->
@@ -0,0 +1,275 @@
1
+ <!-- ============================================================= -->
2
+ <!-- MODULE: Back Matter Elements -->
3
+ <!-- VERSION: 3.0 -->
4
+ <!-- DATE: Apr 2009 -->
5
+ <!-- -->
6
+ <!-- ============================================================= -->
7
+
8
+ <!-- ============================================================= -->
9
+ <!-- PUBLIC DOCUMENT TYPE DEFINITION -->
10
+ <!-- TYPICAL INVOCATION -->
11
+ <!--
12
+ "-//Atypon//DTD Atypon Systems Archival NLM DTD Back Matter Elements v3.0.5 20110520//EN"
13
+ Delivered as file "backmatter3.ent" -->
14
+ <!-- ============================================================= -->
15
+
16
+ <!-- ============================================================= -->
17
+ <!-- SYSTEM: Archiving and Interchange DTD Suite -->
18
+ <!-- -->
19
+ <!-- PURPOSE: Names elements that are not part of the main -->
20
+ <!-- textual flow of a work, but are considered to be -->
21
+ <!-- ancillary material. -->
22
+ <!-- -->
23
+ <!-- CONTAINS: 1) Parameter Entities for attribute lists -->
24
+ <!-- 2) List of the back matter elements in -->
25
+ <!-- alphabetical order -->
26
+ <!-- - Acknowledgments <ack> (defined in -->
27
+ <!-- %common.ent;) -->
28
+ <!-- - Appendix Matter <app-group> -->
29
+ <!-- - Footnote Group <fn-group> -->
30
+ <!-- - Glossary <glossary> -->
31
+ <!-- - Biography <bio> (defined in %common.ent;) -->
32
+ <!-- -->
33
+ <!-- CREATED FOR: -->
34
+ <!-- Digital archives and publishers who wish to -->
35
+ <!-- create a custom XML DTD for original markup of -->
36
+ <!-- journal literature, books, and related material, -->
37
+ <!-- or for archiving and transferring such material -->
38
+ <!-- between archives. -->
39
+ <!-- -->
40
+ <!-- This DTD is in the public domain. An organization -->
41
+ <!-- that wishes to create its own DTD from the suite -->
42
+ <!-- may do so without permission from NLM. -->
43
+ <!-- -->
44
+ <!-- The suite has been set up to be extended using a -->
45
+ <!-- new DTD file and a new DTD-specific customization -->
46
+ <!-- module to redefine the many Parameter Entities. -->
47
+ <!-- Do not modify the suite directly or redistribute -->
48
+ <!-- modified versions of the suite. -->
49
+ <!-- -->
50
+ <!-- In the interest of maintaining consistency and -->
51
+ <!-- clarity for potential users, NLM requests: -->
52
+ <!-- -->
53
+ <!-- 1. If you create a DTD from the Archiving and -->
54
+ <!-- Interchange DTD Suite and intend to stay -->
55
+ <!-- compatible with the suite, then please include -->
56
+ <!-- the following statement as a comment in all of -->
57
+ <!-- your DTD modules: -->
58
+ <!-- "Created from, and fully compatible with, -->
59
+ <!-- the Archiving and Interchange DTD Suite." -->
60
+ <!-- -->
61
+ <!-- 2. If you alter one or more modules of the suite, -->
62
+ <!-- then please rename your version and all its -->
63
+ <!-- modules to avoid any confusion with the -->
64
+ <!-- original suite. Also, please include the -->
65
+ <!-- following statement as a comment in all your -->
66
+ <!-- DTD modules: -->
67
+ <!-- "Based in part on, but not fully compatible -->
68
+ <!-- with, the Archiving and Interchange DTD -->
69
+ <!-- Suite." -->
70
+ <!-- -->
71
+ <!-- ORIGINAL CREATION DATE: -->
72
+ <!-- December 2002 -->
73
+ <!-- -->
74
+ <!-- CREATED BY: Jeff Beck (NCBI) -->
75
+ <!-- Deborah Lapeyre (Mulberry Technologies, Inc.) -->
76
+ <!-- Bruce Rosenblum (Inera Inc.) -->
77
+ <!-- -->
78
+ <!-- NLM thanks the Harvard University Libraries, both -->
79
+ <!-- for proposing that a draft archiving NLM DTD for -->
80
+ <!-- life sciences journals be extended to accommodate -->
81
+ <!-- journals in all disciplines and for sponsoring -->
82
+ <!-- Bruce Rosenblum's collaboration with other DTD -->
83
+ <!-- authors in completing Version 1.0. The Andrew W. -->
84
+ <!-- Mellon Foundation provided support for these -->
85
+ <!-- -->
86
+ <!-- Suggestions for refinements and enhancements to -->
87
+ <!-- the DTD suite should be sent in email to: -->
88
+ <!-- archive-dtd@ncbi.nlm.nih.gov -->
89
+ <!-- ============================================================= -->
90
+
91
+
92
+ <!-- ============================================================= -->
93
+ <!-- DTD VERSION/CHANGE HISTORY -->
94
+ <!-- ============================================================= -->
95
+ <!--
96
+ =============================================================
97
+
98
+ Version Reason/Occasion (who) vx.x (yyyy-mm-dd)
99
+
100
+ =============================================================
101
+ Version 3.0 (DAL/BTU) v3.0 (2007-10-31)
102
+
103
+ Version 3.0 is the first non-backward-compatible release.
104
+ In addition to the usual incremental changes, some
105
+ elements and attributes have been renamed and/or remodeled
106
+ to better meet user needs and to increase tag set consistency.
107
+ All module change histories are available through the Tag Suite
108
+ web site at http://dtd.nlm.nih.gov.
109
+
110
+ Details on version 3.0 are available at
111
+ http://dtd.nlm.nih.gov/3.0.
112
+
113
+ 1. Updated public identifier to "v3.0 20080202//EN" -->
114
+
115
+
116
+ <!-- ============================================================= -->
117
+
118
+
119
+ <!-- ============================================================= -->
120
+ <!-- BACKMATTER ELEMENTS -->
121
+ <!-- ============================================================= -->
122
+
123
+
124
+ <!--ELEM bio Defined in %common.ent; -->
125
+ <!--ELEM ref-list Defined in %references.ent; -->
126
+ <!--ELEM sec Defined in %section.ent; -->
127
+ <!--ELEM ack Defined in %common.ent; -->
128
+
129
+
130
+ <!-- ============================================================= -->
131
+ <!-- PARAMETER ENTITIES FOR ATTRIBUTE LISTS -->
132
+ <!-- ============================================================= -->
133
+
134
+
135
+ <!-- APPENDIX ATTRIBUTES -->
136
+ <!-- Attributes for the Appendix <app> element -->
137
+ <!ENTITY % app-atts
138
+ "id ID #IMPLIED
139
+ content-type
140
+ CDATA #IMPLIED
141
+ specific-use
142
+ CDATA #IMPLIED" >
143
+
144
+
145
+ <!-- APPENDIX GROUP ATTRIBUTES -->
146
+ <!-- Attributes for the Appendix Group <app-group>
147
+ element -->
148
+ <!ENTITY % app-group-atts
149
+ "id ID #IMPLIED
150
+ content-type
151
+ CDATA #IMPLIED
152
+ specific-use
153
+ CDATA #IMPLIED" >
154
+
155
+
156
+ <!-- FOOTNOTE GROUP ATTRIBUTES -->
157
+ <!-- Attributes for the Footnote Group <fn-group>
158
+ element -->
159
+ <!ENTITY % fn-group-atts
160
+ "id ID #IMPLIED
161
+ content-type
162
+ CDATA #IMPLIED
163
+ specific-use
164
+ CDATA #IMPLIED" >
165
+
166
+
167
+ <!-- GLOSSARY ATTRIBUTES -->
168
+ <!-- Attributes for the Glossary <glossary>
169
+ element -->
170
+ <!ENTITY % glossary-atts
171
+ "id ID #IMPLIED
172
+ content-type
173
+ CDATA #IMPLIED
174
+ specific-use
175
+ CDATA #IMPLIED" >
176
+
177
+
178
+ <!-- ============================================================= -->
179
+ <!-- APPENDIX ELEMENTS -->
180
+ <!-- ============================================================= -->
181
+
182
+
183
+ <!-- APPENDIX GROUP MODEL -->
184
+ <!-- Content model for the <app-group> element -->
185
+ <!ENTITY % app-group-model
186
+ "(label?, title?, (%para-level;)*,
187
+ (%app.class; | %ref-list.class;)*)" >
188
+
189
+
190
+ <!-- APPENDIX GROUP -->
191
+ <!-- A container element to hold one or more
192
+ Appendices.
193
+ Details at:
194
+ http://dtd.nlm.nih.gov/archiving/tag-library/3.0/index.html?elem=app-group
195
+ http://dtd.nlm.nih.gov/publishing/tag-library/3.0/index.html?elem=app-group
196
+ http://dtd.nlm.nih.gov/articleauthoring/tag-library/3.0/index.html?elem=app-group
197
+ http://dtd.nlm.nih.gov/book/tag-library/3.0/index.html?elem=app-group
198
+ -->
199
+ <!ELEMENT app-group %app-group-model; >
200
+ <!ATTLIST app-group
201
+ %app-group-atts; >
202
+
203
+
204
+ <!-- APPENDIX MODEL -->
205
+ <!-- Content model for the <app> element. -->
206
+ <!ENTITY % app-model "(%sec-model;, permissions?)" >
207
+
208
+
209
+ <!-- APPENDIX -->
210
+ <!-- Details at:
211
+ http://dtd.nlm.nih.gov/archiving/tag-library/3.0/index.html?elem=app
212
+ http://dtd.nlm.nih.gov/publishing/tag-library/3.0/index.html?elem=app
213
+ http://dtd.nlm.nih.gov/articleauthoring/tag-library/3.0/index.html?elem=app
214
+ http://dtd.nlm.nih.gov/book/tag-library/3.0/index.html?elem=app
215
+ -->
216
+ <!ELEMENT app %app-model; >
217
+ <!ATTLIST app
218
+ %app-atts; >
219
+
220
+
221
+ <!-- ============================================================= -->
222
+ <!-- FOOTNOTE GROUPING ELEMENTS -->
223
+ <!-- ============================================================= -->
224
+
225
+
226
+ <!-- FOOTNOTE GROUP MODEL -->
227
+ <!-- Content model for the <fn-group> element -->
228
+ <!ENTITY % fn-group-model
229
+ "(label?, title?, (%fn-link.class;)+ )" >
230
+
231
+
232
+ <!-- FOOTNOTE GROUP -->
233
+ <!-- Footnotes in a journal article may be
234
+ scattered throughout the text, at the places
235
+ they occur, or collected in groups at the
236
+ end of structural units. This element is a
237
+ wrapper tag for such groups of footnotes.
238
+ Details at:
239
+ http://dtd.nlm.nih.gov/archiving/tag-library/3.0/index.html?elem=fn-group
240
+ http://dtd.nlm.nih.gov/publishing/tag-library/3.0/index.html?elem=fn-group
241
+ http://dtd.nlm.nih.gov/articleauthoring/tag-library/3.0/index.html?elem=fn-group
242
+ http://dtd.nlm.nih.gov/book/tag-library/3.0/index.html?elem=fn-group
243
+ -->
244
+ <!ELEMENT fn-group %fn-group-model; >
245
+ <!ATTLIST fn-group
246
+ %fn-group-atts; >
247
+
248
+
249
+ <!-- ============================================================= -->
250
+ <!-- GLOSSARY -->
251
+ <!-- ============================================================= -->
252
+
253
+
254
+ <!-- GLOSSARY MODEL -->
255
+ <!-- Content model for the <glossary> element -->
256
+ <!ENTITY % glossary-model
257
+ "(label?, title?, (%para-level;)*, glossary*)"
258
+ >
259
+
260
+
261
+ <!-- GLOSSARY ELEMENTS -->
262
+ <!-- Glossary or list of definitions. Typically
263
+ the content will be one or more <def-list>s.
264
+ Details at:
265
+ http://dtd.nlm.nih.gov/archiving/tag-library/3.0/index.html?elem=glossary
266
+ http://dtd.nlm.nih.gov/publishing/tag-library/3.0/index.html?elem=glossary
267
+ http://dtd.nlm.nih.gov/articleauthoring/tag-library/3.0/index.html?elem=glossary
268
+ http://dtd.nlm.nih.gov/book/tag-library/3.0/index.html?elem=glossary
269
+ -->
270
+ <!ELEMENT glossary %glossary-model; >
271
+ <!ATTLIST glossary
272
+ %glossary-atts; >
273
+
274
+
275
+ <!-- ================== End Back Matter Module =================== -->