pharmaobservatory 0.1.0 → 0.1.2

data/lib/pharmaobservatory/models/biomarkers_where_it_appears200_response_rows_inner.rb

@@ -0,0 +1,275 @@
+=begin
+#Pharma Observatory Public REST API
+
+#Read-only REST API over the Pharma Observatory biomedical data platform. Reference: https://pharmaobservatory.com/api-reference
+
+The version of the OpenAPI document: 1.0.0
+
+Generated by: https://openapi-generator.tech
+Generator version: 7.13.0
+
+=end
+
+require 'date'
+require 'time'
+
+module PharmaObservatory
+  class BiomarkersWhereItAppears200ResponseRowsInner
+    attr_accessor :kind
+
+    attr_accessor :name
+
+    attr_accessor :condition_id
+
+    # Attribute mapping from ruby-style variable name to JSON key.
+    def self.attribute_map
+      {
+        :'kind' => :'kind',
+        :'name' => :'name',
+        :'condition_id' => :'condition_id'
+      }
+    end
+
+    # Returns attribute mapping this model knows about
+    def self.acceptable_attribute_map
+      attribute_map
+    end
+
+    # Returns all the JSON keys this model knows about
+    def self.acceptable_attributes
+      acceptable_attribute_map.values
+    end
+
+    # Attribute type mapping.
+    def self.openapi_types
+      {
+        :'kind' => :'String',
+        :'name' => :'String',
+        :'condition_id' => :'Object'
+      }
+    end
+
+    # List of attributes with nullable: true
+    def self.openapi_nullable
+      Set.new([
+        :'condition_id'
+      ])
+    end
+
+    # Initializes the object
+    # @param [Hash] attributes Model attributes in the form of hash
+    def initialize(attributes = {})
+      if (!attributes.is_a?(Hash))
+        fail ArgumentError, "The input argument (attributes) must be a hash in `PharmaObservatory::BiomarkersWhereItAppears200ResponseRowsInner` initialize method"
+      end
+
+      # check to see if the attribute exists and convert string to symbol for hash key
+      acceptable_attribute_map = self.class.acceptable_attribute_map
+      attributes = attributes.each_with_object({}) { |(k, v), h|
+        if (!acceptable_attribute_map.key?(k.to_sym))
+          fail ArgumentError, "`#{k}` is not a valid attribute in `PharmaObservatory::BiomarkersWhereItAppears200ResponseRowsInner`. Please check the name to make sure it's valid. List of attributes: " + acceptable_attribute_map.keys.inspect
+        end
+        h[k.to_sym] = v
+      }
+
+      if attributes.key?(:'kind')
+        self.kind = attributes[:'kind']
+      else
+        self.kind = nil
+      end
+
+      if attributes.key?(:'name')
+        self.name = attributes[:'name']
+      else
+        self.name = nil
+      end
+
+      if attributes.key?(:'condition_id')
+        self.condition_id = attributes[:'condition_id']
+      else
+        self.condition_id = nil
+      end
+    end
+
+    # Show invalid properties with the reasons. Usually used together with valid?
+    # @return Array for valid properties with the reasons
+    def list_invalid_properties
+      warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
+      invalid_properties = Array.new
+      if @kind.nil?
+        invalid_properties.push('invalid value for "kind", kind cannot be nil.')
+      end
+
+      if @name.nil?
+        invalid_properties.push('invalid value for "name", name cannot be nil.')
+      end
+
+      invalid_properties
+    end
+
+    # Check to see if the all the properties in the model are valid
+    # @return true if the model is valid
+    def valid?
+      warn '[DEPRECATED] the `valid?` method is obsolete'
+      return false if @kind.nil?
+      return false if @name.nil?
+      true
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] kind Value to be assigned
+    def kind=(kind)
+      if kind.nil?
+        fail ArgumentError, 'kind cannot be nil'
+      end
+
+      @kind = kind
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] name Value to be assigned
+    def name=(name)
+      if name.nil?
+        fail ArgumentError, 'name cannot be nil'
+      end
+
+      @name = name
+    end
+
+    # Checks equality by comparing each attribute.
+    # @param [Object] Object to be compared
+    def ==(o)
+      return true if self.equal?(o)
+      self.class == o.class &&
+          kind == o.kind &&
+          name == o.name &&
+          condition_id == o.condition_id
+    end
+
+    # @see the `==` method
+    # @param [Object] Object to be compared
+    def eql?(o)
+      self == o
+    end
+
+    # Calculates hash code according to all attributes.
+    # @return [Integer] Hash code
+    def hash
+      [kind, name, condition_id].hash
+    end
+
+    # Builds the object from hash
+    # @param [Hash] attributes Model attributes in the form of hash
+    # @return [Object] Returns the model itself
+    def self.build_from_hash(attributes)
+      return nil unless attributes.is_a?(Hash)
+      attributes = attributes.transform_keys(&:to_sym)
+      transformed_hash = {}
+      openapi_types.each_pair do |key, type|
+        if attributes.key?(attribute_map[key]) && attributes[attribute_map[key]].nil?
+          transformed_hash["#{key}"] = nil
+        elsif type =~ /\AArray<(.*)>/i
+          # check to ensure the input is an array given that the attribute
+          # is documented as an array but the input is not
+          if attributes[attribute_map[key]].is_a?(Array)
+            transformed_hash["#{key}"] = attributes[attribute_map[key]].map { |v| _deserialize($1, v) }
+          end
+        elsif !attributes[attribute_map[key]].nil?
+          transformed_hash["#{key}"] = _deserialize(type, attributes[attribute_map[key]])
+        end
+      end
+      new(transformed_hash)
+    end
+
+    # Deserializes the data based on type
+    # @param string type Data type
+    # @param string value Value to be deserialized
+    # @return [Object] Deserialized data
+    def self._deserialize(type, value)
+      case type.to_sym
+      when :Time
+        Time.parse(value)
+      when :Date
+        Date.parse(value)
+      when :String
+        value.to_s
+      when :Integer
+        value.to_i
+      when :Float
+        value.to_f
+      when :Boolean
+        if value.to_s =~ /\A(true|t|yes|y|1)\z/i
+          true
+        else
+          false
+        end
+      when :Object
+        # generic object (usually a Hash), return directly
+        value
+      when /\AArray<(?<inner_type>.+)>\z/
+        inner_type = Regexp.last_match[:inner_type]
+        value.map { |v| _deserialize(inner_type, v) }
+      when /\AHash<(?<k_type>.+?), (?<v_type>.+)>\z/
+        k_type = Regexp.last_match[:k_type]
+        v_type = Regexp.last_match[:v_type]
+        {}.tap do |hash|
+          value.each do |k, v|
+            hash[_deserialize(k_type, k)] = _deserialize(v_type, v)
+          end
+        end
+      else # model
+        # models (e.g. Pet) or oneOf
+        klass = PharmaObservatory.const_get(type)
+        klass.respond_to?(:openapi_any_of) || klass.respond_to?(:openapi_one_of) ? klass.build(value) : klass.build_from_hash(value)
+      end
+    end
+
+    # Returns the string representation of the object
+    # @return [String] String presentation of the object
+    def to_s
+      to_hash.to_s
+    end
+
+    # to_body is an alias to to_hash (backward compatibility)
+    # @return [Hash] Returns the object in the form of hash
+    def to_body
+      to_hash
+    end
+
+    # Returns the object in the form of hash
+    # @return [Hash] Returns the object in the form of hash
+    def to_hash
+      hash = {}
+      self.class.attribute_map.each_pair do |attr, param|
+        value = self.send(attr)
+        if value.nil?
+          is_nullable = self.class.openapi_nullable.include?(attr)
+          next if !is_nullable || (is_nullable && !instance_variable_defined?(:"@#{attr}"))
+        end
+
+        hash[param] = _to_hash(value)
+      end
+      hash
+    end
+
+    # Outputs non-array value in the form of hash
+    # For object, use to_hash. Otherwise, just return the value
+    # @param [Object] value Any valid value
+    # @return [Hash] Returns the value in the form of hash
+    def _to_hash(value)
+      if value.is_a?(Array)
+        value.compact.map { |v| _to_hash(v) }
+      elsif value.is_a?(Hash)
+        {}.tap do |hash|
+          value.each { |k, v| hash[k] = _to_hash(v) }
+        end
+      elsif value.respond_to? :to_hash
+        value.to_hash
+      else
+        value
+      end
+    end
+
+  end
+
+end

data/lib/pharmaobservatory/models/cell_lines_get200_response.rb

@@ -0,0 +1,423 @@
+=begin
+#Pharma Observatory Public REST API
+
+#Read-only REST API over the Pharma Observatory biomedical data platform. Reference: https://pharmaobservatory.com/api-reference
+
+The version of the OpenAPI document: 1.0.0
+
+Generated by: https://openapi-generator.tech
+Generator version: 7.13.0
+
+=end
+
+require 'date'
+require 'time'
+
+module PharmaObservatory
+  class CellLinesGet200Response
+    attr_accessor :page
+
+    attr_accessor :id
+
+    attr_accessor :identity
+
+    attr_accessor :sections
+
+    attr_accessor :attribution
+
+    attr_accessor :web_url
+
+    attr_accessor :build_state
+
+    attr_accessor :resolution_confidence
+
+    # Attribute mapping from ruby-style variable name to JSON key.
+    def self.attribute_map
+      {
+        :'page' => :'page',
+        :'id' => :'id',
+        :'identity' => :'identity',
+        :'sections' => :'sections',
+        :'attribution' => :'attribution',
+        :'web_url' => :'web_url',
+        :'build_state' => :'build_state',
+        :'resolution_confidence' => :'resolution_confidence'
+      }
+    end
+
+    # Returns attribute mapping this model knows about
+    def self.acceptable_attribute_map
+      attribute_map
+    end
+
+    # Returns all the JSON keys this model knows about
+    def self.acceptable_attributes
+      acceptable_attribute_map.values
+    end
+
+    # Attribute type mapping.
+    def self.openapi_types
+      {
+        :'page' => :'String',
+        :'id' => :'String',
+        :'identity' => :'CellLinesGet200ResponseIdentity',
+        :'sections' => :'Array<BiomarkersGet200ResponseSectionsInner>',
+        :'attribution' => :'Array<CellLinesList200ResponseAttributionInner>',
+        :'web_url' => :'String',
+        :'build_state' => :'BiomarkersList200ResponseBuildState',
+        :'resolution_confidence' => :'BiomarkersGet200ResponseResolutionConfidence'
+      }
+    end
+
+    # List of attributes with nullable: true
+    def self.openapi_nullable
+      Set.new([
+      ])
+    end
+
+    # Initializes the object
+    # @param [Hash] attributes Model attributes in the form of hash
+    def initialize(attributes = {})
+      if (!attributes.is_a?(Hash))
+        fail ArgumentError, "The input argument (attributes) must be a hash in `PharmaObservatory::CellLinesGet200Response` initialize method"
+      end
+
+      # check to see if the attribute exists and convert string to symbol for hash key
+      acceptable_attribute_map = self.class.acceptable_attribute_map
+      attributes = attributes.each_with_object({}) { |(k, v), h|
+        if (!acceptable_attribute_map.key?(k.to_sym))
+          fail ArgumentError, "`#{k}` is not a valid attribute in `PharmaObservatory::CellLinesGet200Response`. Please check the name to make sure it's valid. List of attributes: " + acceptable_attribute_map.keys.inspect
+        end
+        h[k.to_sym] = v
+      }
+
+      if attributes.key?(:'page')
+        self.page = attributes[:'page']
+      else
+        self.page = nil
+      end
+
+      if attributes.key?(:'id')
+        self.id = attributes[:'id']
+      else
+        self.id = nil
+      end
+
+      if attributes.key?(:'identity')
+        self.identity = attributes[:'identity']
+      else
+        self.identity = nil
+      end
+
+      if attributes.key?(:'sections')
+        if (value = attributes[:'sections']).is_a?(Array)
+          self.sections = value
+        end
+      else
+        self.sections = nil
+      end
+
+      if attributes.key?(:'attribution')
+        if (value = attributes[:'attribution']).is_a?(Array)
+          self.attribution = value
+        end
+      else
+        self.attribution = nil
+      end
+
+      if attributes.key?(:'web_url')
+        self.web_url = attributes[:'web_url']
+      else
+        self.web_url = nil
+      end
+
+      if attributes.key?(:'build_state')
+        self.build_state = attributes[:'build_state']
+      else
+        self.build_state = nil
+      end
+
+      if attributes.key?(:'resolution_confidence')
+        self.resolution_confidence = attributes[:'resolution_confidence']
+      else
+        self.resolution_confidence = nil
+      end
+    end
+
+    # Show invalid properties with the reasons. Usually used together with valid?
+    # @return Array for valid properties with the reasons
+    def list_invalid_properties
+      warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
+      invalid_properties = Array.new
+      if @page.nil?
+        invalid_properties.push('invalid value for "page", page cannot be nil.')
+      end
+
+      if @id.nil?
+        invalid_properties.push('invalid value for "id", id cannot be nil.')
+      end
+
+      if @identity.nil?
+        invalid_properties.push('invalid value for "identity", identity cannot be nil.')
+      end
+
+      if @sections.nil?
+        invalid_properties.push('invalid value for "sections", sections cannot be nil.')
+      end
+
+      if @attribution.nil?
+        invalid_properties.push('invalid value for "attribution", attribution cannot be nil.')
+      end
+
+      if @web_url.nil?
+        invalid_properties.push('invalid value for "web_url", web_url cannot be nil.')
+      end
+
+      if @build_state.nil?
+        invalid_properties.push('invalid value for "build_state", build_state cannot be nil.')
+      end
+
+      if @resolution_confidence.nil?
+        invalid_properties.push('invalid value for "resolution_confidence", resolution_confidence cannot be nil.')
+      end
+
+      invalid_properties
+    end
+
+    # Check to see if the all the properties in the model are valid
+    # @return true if the model is valid
+    def valid?
+      warn '[DEPRECATED] the `valid?` method is obsolete'
+      return false if @page.nil?
+      return false if @id.nil?
+      return false if @identity.nil?
+      return false if @sections.nil?
+      return false if @attribution.nil?
+      return false if @web_url.nil?
+      return false if @build_state.nil?
+      return false if @resolution_confidence.nil?
+      true
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] page Value to be assigned
+    def page=(page)
+      if page.nil?
+        fail ArgumentError, 'page cannot be nil'
+      end
+
+      @page = page
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] id Value to be assigned
+    def id=(id)
+      if id.nil?
+        fail ArgumentError, 'id cannot be nil'
+      end
+
+      @id = id
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] identity Value to be assigned
+    def identity=(identity)
+      if identity.nil?
+        fail ArgumentError, 'identity cannot be nil'
+      end
+
+      @identity = identity
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] sections Value to be assigned
+    def sections=(sections)
+      if sections.nil?
+        fail ArgumentError, 'sections cannot be nil'
+      end
+
+      @sections = sections
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] attribution Value to be assigned
+    def attribution=(attribution)
+      if attribution.nil?
+        fail ArgumentError, 'attribution cannot be nil'
+      end
+
+      @attribution = attribution
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] web_url Value to be assigned
+    def web_url=(web_url)
+      if web_url.nil?
+        fail ArgumentError, 'web_url cannot be nil'
+      end
+
+      @web_url = web_url
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] build_state Value to be assigned
+    def build_state=(build_state)
+      if build_state.nil?
+        fail ArgumentError, 'build_state cannot be nil'
+      end
+
+      @build_state = build_state
+    end
+
+    # Custom attribute writer method with validation
+    # @param [Object] resolution_confidence Value to be assigned
+    def resolution_confidence=(resolution_confidence)
+      if resolution_confidence.nil?
+        fail ArgumentError, 'resolution_confidence cannot be nil'
+      end
+
+      @resolution_confidence = resolution_confidence
+    end
+
+    # Checks equality by comparing each attribute.
+    # @param [Object] Object to be compared
+    def ==(o)
+      return true if self.equal?(o)
+      self.class == o.class &&
+          page == o.page &&
+          id == o.id &&
+          identity == o.identity &&
+          sections == o.sections &&
+          attribution == o.attribution &&
+          web_url == o.web_url &&
+          build_state == o.build_state &&
+          resolution_confidence == o.resolution_confidence
+    end
+
+    # @see the `==` method
+    # @param [Object] Object to be compared
+    def eql?(o)
+      self == o
+    end
+
+    # Calculates hash code according to all attributes.
+    # @return [Integer] Hash code
+    def hash
+      [page, id, identity, sections, attribution, web_url, build_state, resolution_confidence].hash
+    end
+
+    # Builds the object from hash
+    # @param [Hash] attributes Model attributes in the form of hash
+    # @return [Object] Returns the model itself
+    def self.build_from_hash(attributes)
+      return nil unless attributes.is_a?(Hash)
+      attributes = attributes.transform_keys(&:to_sym)
+      transformed_hash = {}
+      openapi_types.each_pair do |key, type|
+        if attributes.key?(attribute_map[key]) && attributes[attribute_map[key]].nil?
+          transformed_hash["#{key}"] = nil
+        elsif type =~ /\AArray<(.*)>/i
+          # check to ensure the input is an array given that the attribute
+          # is documented as an array but the input is not
+          if attributes[attribute_map[key]].is_a?(Array)
+            transformed_hash["#{key}"] = attributes[attribute_map[key]].map { |v| _deserialize($1, v) }
+          end
+        elsif !attributes[attribute_map[key]].nil?
+          transformed_hash["#{key}"] = _deserialize(type, attributes[attribute_map[key]])
+        end
+      end
+      new(transformed_hash)
+    end
+
+    # Deserializes the data based on type
+    # @param string type Data type
+    # @param string value Value to be deserialized
+    # @return [Object] Deserialized data
+    def self._deserialize(type, value)
+      case type.to_sym
+      when :Time
+        Time.parse(value)
+      when :Date
+        Date.parse(value)
+      when :String
+        value.to_s
+      when :Integer
+        value.to_i
+      when :Float
+        value.to_f
+      when :Boolean
+        if value.to_s =~ /\A(true|t|yes|y|1)\z/i
+          true
+        else
+          false
+        end
+      when :Object
+        # generic object (usually a Hash), return directly
+        value
+      when /\AArray<(?<inner_type>.+)>\z/
+        inner_type = Regexp.last_match[:inner_type]
+        value.map { |v| _deserialize(inner_type, v) }
+      when /\AHash<(?<k_type>.+?), (?<v_type>.+)>\z/
+        k_type = Regexp.last_match[:k_type]
+        v_type = Regexp.last_match[:v_type]
+        {}.tap do |hash|
+          value.each do |k, v|
+            hash[_deserialize(k_type, k)] = _deserialize(v_type, v)
+          end
+        end
+      else # model
+        # models (e.g. Pet) or oneOf
+        klass = PharmaObservatory.const_get(type)
+        klass.respond_to?(:openapi_any_of) || klass.respond_to?(:openapi_one_of) ? klass.build(value) : klass.build_from_hash(value)
+      end
+    end
+
+    # Returns the string representation of the object
+    # @return [String] String presentation of the object
+    def to_s
+      to_hash.to_s
+    end
+
+    # to_body is an alias to to_hash (backward compatibility)
+    # @return [Hash] Returns the object in the form of hash
+    def to_body
+      to_hash
+    end
+
+    # Returns the object in the form of hash
+    # @return [Hash] Returns the object in the form of hash
+    def to_hash
+      hash = {}
+      self.class.attribute_map.each_pair do |attr, param|
+        value = self.send(attr)
+        if value.nil?
+          is_nullable = self.class.openapi_nullable.include?(attr)
+          next if !is_nullable || (is_nullable && !instance_variable_defined?(:"@#{attr}"))
+        end
+
+        hash[param] = _to_hash(value)
+      end
+      hash
+    end
+
+    # Outputs non-array value in the form of hash
+    # For object, use to_hash. Otherwise, just return the value
+    # @param [Object] value Any valid value
+    # @return [Hash] Returns the value in the form of hash
+    def _to_hash(value)
+      if value.is_a?(Array)
+        value.compact.map { |v| _to_hash(v) }
+      elsif value.is_a?(Hash)
+        {}.tap do |hash|
+          value.each { |k, v| hash[k] = _to_hash(v) }
+        end
+      elsif value.respond_to? :to_hash
+        value.to_hash
+      else
+        value
+      end
+    end
+
+  end
+
+end