oddb.org 1.0.0 → 1.0.1

data/Guide.txt

@@ -37,9 +37,9 @@ dependencies:
   13. racc
   14. rmail
   15. ruby-dbi    (*4)
-  16. ruby-gd   (*5)    
+  16. ruby-gd     (*5)    
   17. ruby-password (*6)
-  18. ruby-postgres
+  18. ruby-pg     (*7)
   19. rubyzip
   20. spreadsheet
   21. tarsimple
@@ -57,13 +57,13 @@ dependencies:
   8.  swissmedic-diff
   9.  ydim
   10. yus
-  11. oniguruma_patch     (*7)  
+  11. oniguruma_patch     (*8)  
 
 === IV Others
-  1. html-parser.rb (*8)
+  1. html-parser.rb (*9)
   2. formatter.rb
   3. sgml-parser.rb
-  4. rockit   (*9)
+  4. rockit   (*10)
 
 ----
 *1 Ruby MUST be version 1.8.6 (<= patch level 369). 
@@ -76,16 +76,19 @@ dependencies:
     http://raa.ruby-lang.org/cache/ruby-gd/
 *6 ruby-password 0.5.3 
     http://www.caliban.org/ruby/ruby-password.shtml
-*7 oniguruma patch for Ruby 1.8.6
+*7 ruby gem name is 'pg'. See http://rubygems.org/gems/pg
+   pg 0.9.0 requires Ruby 1.8.7 or later version
+   ruby-postgres (0.7.9.20080128) is also available instead of ruby-pg.
+*8 oniguruma patch for Ruby 1.8.6
     http://trac.ywesee.com/raw-attachment/ticket/166/oniguruma_patch_hannes_15.6.2010.tar.gz
-*8 html-parser.rb, formatter.rb and sgml-parser.rb are
+*9 html-parser.rb, formatter.rb and sgml-parser.rb are
    originally placed on
     http://raa.ruby-lang.org/project/html-parser-2/. 
    However, the links are dead. You can get them from
     http://trac.ywesee.com/raw-attachment/ticket/226/html-parser.rb
     http://trac.ywesee.com/raw-attachment/ticket/226/sgml-parser.rb
     http://trac.ywesee.com/raw-attachment/ticket/226/formatter.rb
-*9 Rockit is the 'Ruby O-o Compiler construction toolKIT'
+*10 Rockit is the 'Ruby O-o Compiler construction toolKIT'
    You can get the rockit version 0.3.8 from 
     http://rockit.sourceforge.net/
    There is a more recent version, 0.7.2, but it does not work
@@ -121,7 +124,7 @@ following versions:
   23. ruby-gd           0.7.4
   24. ruby-ole          1.2.10.1
   25. ruby-password     0.5.3
-  26. ruby-postgres     0.7.9.20080128
+  26. ruby-pg           0.8.0 (gem name is 'pg')
   27. rubyzip           0.5.12
   28. spreadsheet       0.6.4.1
   29. tmail             1.2.7.1
@@ -627,7 +630,7 @@ way
 
 Also see: 
 
-  * http://masaywesee.wordpress.com/2010/07/21/rewind-postgresql-data/
+* http://masaywesee.wordpress.com/2010/07/21/rewind-postgresql-data/
 
 == Background
 
@@ -646,24 +649,27 @@ Post by Tim: This certainly carries some pretty scary scenarios. Are
 there not laws to prevent abuse? It would seem that a government
 monoploy has been issued here and there would be protections in place.
 
-Post by Zeno: 1. Yes, that is exactly the problem. The company that has
+Post by Zeno: 
+
+Yes, that is exactly the problem. The company that has
 the monopoly also is working for the government and administrating the
 database of all drugs that are covered by the public health insurance.
-2. I have taken the above issues to antitrust department and the 'price
+
+I have taken the above issues to antitrust department and the 'price
 governing' department of Switzerland. The first pushed the issue to the
 second and vice versa. I then contacted the leading consumer
-representative of Switzerland and she gave the issue some momentum.  3.
+representative of Switzerland and she gave the issue some momentum.  
+
 The result of the above is ODDB.org an independent database for
 Switzerland. My personal interest is the acceleration of the electronic
 data interchange in the healthcare industry. This can only take place on
 open standards.
 
 More here:
-  
-  * http://www.ywesee.com/pmwiki.php/Main/WekoBlog
-  * http://www.ywesee.com/pmwiki.php/Main/Bundesgerichtsurteil
+* http://www.ywesee.com/pmwiki.php/Main/WekoBlog
+* http://www.ywesee.com/pmwiki.php/Main/Bundesgerichtsurteil
 
-Authors Guide.txt
+== Authors Guide.txt
 
 * Masaomi Hatakeyama
 * Zeno R.R. Davatz

data/{README → INSTALL_from_Source.txt}

@@ -1,28 +1,25 @@
-ODDB.org stands for OpenDrugDatabase 
-====================================
-
-Date: 2010-08-09
+== ODDB.org stands for OpenDrugDatabase 
+Date: 09.08.2010
+Last Update: 22.12.2010
 
 Short Description: ODDB.org is an OpenDrugDatabase that enables the
 search for Drugs by their ActiveAgent, Name, Producer, ATC-Code.  You
 can do a price comparison between the Original Drug and the Generic by
 Clicking on the Drug's Name. The database tells you when the Drug has
-been registred in Switzerland. ODDB.org exports the complete Data in
-the YAML.org Format (15'881 registred products).
+been registered in Switzerland. ODDB.org exports the complete Data in
+the YAML.org Format (15'881 registered products).
 
 For for more information about the background see:
 
-	* http://www.ywesee.com
-	* http://www.oddb.org
-	* http://dev.ywesee.com
-	
-For usage also see:
+* http://www.ywesee.com
+* http://www.oddb.org
+* http://dev.ywesee.com
 
-	* http://wiki.oddb.org/
+For usage also see:
 
-Requirements
-------------
+* http://wiki.oddb.org/
 
+=== Requirements
 ch.oddb.org has a large set of functionality, and with it a large set of
 dependencies:
 
@@ -169,8 +166,7 @@ following versions:
                  cd text-hyphenate; ruby install.rb config;
                  ruby install.rb setup; sudo ruby install.rb install }}})
 	
-Install 
-------- 
+=== Install 
 Although it is possible to install ch.oddb.org in any linux system, we
 recommend the installation of ch.oddb.org in Gentoo (Funtoo) linux.
 
@@ -676,8 +672,7 @@ recommend the installation of ch.oddb.org in Gentoo (Funtoo) linux.
 		those of the version of last year. Just compare the two
 		CSV files headers.
 
-rewind the data of PostgreSQL on ch.oddb.org
---------------------------------------------
+=== rewind the data of PostgreSQL on ch.oddb.org
 If Swissmedic publishes Bullshit data and everything is connected in the wrong way
 	
 	(get an archive)
@@ -695,86 +690,80 @@ If Swissmedic publishes Bullshit data and everything is connected in the wrong w
 
 Also see: 
 
-	* http://masaywesee.wordpress.com/2010/07/21/rewind-postgresql-data/
+* http://masaywesee.wordpress.com/2010/07/21/rewind-postgresql-data/
 
-Install Instructions
---------------------
+=== Install Instructions
 
-	* http://dev.ywesee.com/wiki.php/Oddb/InstallOddb
+* http://dev.ywesee.com/wiki.php/Oddb/InstallOddb
 
-Further Information
--------------------
-	* http://trac.ywesee.com/ticket/226
+==== Further Information
 
-Usage
------
+* http://trac.ywesee.com/ticket/226
 
-	* Normal Consumer
-	* Health Insurance (Krankenkasse)
-	* Pharmacie
-	* Hospital
-	* Doctor / Physician
-	* Pharma Marketing
+=== Usage
+
+* Normal Consumer
+* Health Insurance (Krankenkasse)
+* Pharmacie
+* Hospital
+* Doctor / Physician
+* Pharma Marketing
+
+=== Background
 
-Background
-----------
-	
 A discussion on http://www.linuxmednews.org 
 
 Post by Zeno: In Switzerland we have the problem that there is only one
 provider of the data. And that provider serves all hospitals, doctors,
 old age homes, pharmacies etc. As they have the monopoly the could issue
 a tax on every transaction that is done with there data; Example: The
-docotor in the hospital prescribes one drug to the patient. That info
+doctor in the hospital prescribes one drug to the patient. That info
 goes into the system and then gets passed on the specialist (external of
 hospital) and then gets passed on to the insurance etc. Imagine you
 must pay 50cent for every transaction of the data...  
 
 Post by Tim: This certainly carries some pretty scary scenarios. Are
 there not laws to prevent abuse? It would seem that a government
-monoploy has been issued here and there would be protections in place.
-
-Post by Zeno: 1. Yes, that is exactly the problem. The company that has
-the monopoly also is working for the government and administrating the
-database of all drugs that are covered by the public health insurance.
-2. I have taken the above issues to antitrust department and the 'price
-governing' department of Switzerland. The first pushed the issue to the
-second and vice versa. I then contacted the leading consumer
-representative of Switzerland and she gave the issue some momentum.  3.
-The result of the above is ODDB.org an independent database for
-Switzerland. My personal interest is the acceleration of the electronic
-data interchange in the healthcare industry. This can only take place on
-open standards.
-
-More here:
-	
-	* http://www.ywesee.com/pmwiki.php/Main/WekoBlog
-	* http://www.ywesee.com/pmwiki.php/Main/Bundesgerichtsurteil
+monopoly has been issued here and there would be protections in place.
 
-License
--------
+Post by Zeno: 1. Yes, that is exactly the problem. The company
+that has the monopoly also is working for the government and 
+administrating the database of all drugs that are covered by the
+public health insurance. 2. I have taken the above issues to 
+antitrust department and the 'price governing' department of
+Switzerland. The first pushed the issue to the second and vice
+versa. I then contacted the leading consumer representative of
+Switzerland and she gave the issue some momentum. 3. The result of 
+the above is ODDB.org an independent database for Switzerland. 
+My personal interest is the acceleration of the electronic data 
+interchange in the healthcare industry. This can only take place 
+on open standards.
 
-	* LGPL
-	
-Source Code Download with GIT
------------------------------
+More here:	
+* http://www.ywesee.com/pmwiki.php/Main/WekoBlog
+* http://www.ywesee.com/pmwiki.php/Main/Bundesgerichtsurteil
+
+=== License
+
+* GPLv2
+
+=== Source Code Download with GIT
 
-	* URL: http://scm.ywesee.com/?p=oddb.org/.git;a=summary
+* URL: http://scm.ywesee.com/?p=oddb.org/.git;a=summary
 
-Authors
--------
+=== Authors
 
-	* ywesee GmbH
+* ywesee GmbH
 
-	* Hannes Wyss <hwyss@ywesee.com>
-	* Markus Huggler <maege@ywesee.com>
-	* Mike Walder <walder@allink.ch> 
-	* Raphael Waltert <rwaltert@ywesee.com>
-	* Andreas Schrafl <aschrafl@ywesee.com>
-	* Benjamin Fay <benfay@ywesee.com> 
+* Zeno R.R. Davatz <zdavatz@ywesee.com>
+* Hannes Wyss <hwyss@ywesee.com>
+* Markus Huggler <maege@ywesee.com>
+* Mike Walder <walder@allink.ch> 
+* Raphael Waltert <rwaltert@ywesee.com>
+* Andreas Schrafl <aschrafl@ywesee.com>
+* Benjamin Fay <benfay@ywesee.com> 
 
-README Author
--------------
+=== README Author
 
-	* Zeno Davatz <zdavatz@ywesee.com>
-	* Masaomi Hatakeyama <mhatakeyama@ywesee.com>
+* Zeno Davatz <zdavatz@ywesee.com>
+* Masaomi Hatakeyama <mhatakeyama@ywesee.com>

data/Manifest.txt

@@ -1,8 +1,8 @@
 Guide.txt
 History.txt
+INSTALL_from_Source.txt
 LICENCE.txt
 Manifest.txt
-README
 README.txt
 Rakefile
 bin/admin
@@ -26,6 +26,107 @@ data/quanty/quanty-ja.rd
 data/quanty/test.rb
 data/quanty/units.dat
 data/txt/datenbeschrieb.txt
+doc/favicon.ico
+doc/index.rbx
+doc/resources/anthroposophy/favicon.ico
+doc/resources/anthroposophy/logo.png
+doc/resources/atupri/logo.gif
+doc/resources/desitin/logo.jpg
+doc/resources/downloads/datadesc/analysis.csv.txt
+doc/resources/downloads/datadesc/doctors.csv.txt
+doc/resources/downloads/datadesc/doctors.yaml.txt
+doc/resources/downloads/datadesc/fachinfo.yaml.txt
+doc/resources/downloads/datadesc/generics.xls.txt
+doc/resources/downloads/datadesc/index_therapeuticus.txt
+doc/resources/downloads/datadesc/interactions.yaml.txt
+doc/resources/downloads/datadesc/migel.csv.txt
+doc/resources/downloads/datadesc/narcotics.csv.txt
+doc/resources/downloads/datadesc/narcotics.yaml.txt
+doc/resources/downloads/datadesc/oddb.csv.txt
+doc/resources/downloads/datadesc/oddb.yaml.txt
+doc/resources/downloads/datadesc/oddb2.csv.txt
+doc/resources/downloads/datadesc/oddbdat.txt
+doc/resources/downloads/datadesc/patents.xls.txt
+doc/resources/downloads/datadesc/patinfo.yaml.txt
+doc/resources/downloads/datadesc/price_history.csv.txt
+doc/resources/downloads/datadesc/price_history.yaml.txt
+doc/resources/downloads/datadesc/s31x.txt
+doc/resources/downloads/datadesc/swissdrug-update.xls.txt
+doc/resources/downloads/examples/Inderal.Preisvergleich.csv
+doc/resources/downloads/examples/analysis.csv
+doc/resources/downloads/examples/compendium_ch.oddb.org.firefox.epub
+doc/resources/downloads/examples/compendium_ch.oddb.org.htc.prc
+doc/resources/downloads/examples/compendium_ch.oddb.org.kindle.mobi
+doc/resources/downloads/examples/compendium_ch.oddb.org.stanza.epub
+doc/resources/downloads/examples/doctors.csv
+doc/resources/downloads/examples/doctors.yaml
+doc/resources/downloads/examples/fachinfo.yaml
+doc/resources/downloads/examples/fachinfos_de.pdf
+doc/resources/downloads/examples/fachinfos_fr.pdf
+doc/resources/downloads/examples/generics.xls
+doc/resources/downloads/examples/index_therapeuticus.tar.gz
+doc/resources/downloads/examples/interactions.yaml
+doc/resources/downloads/examples/migel.csv
+doc/resources/downloads/examples/narcotics.yaml
+doc/resources/downloads/examples/oddb.csv
+doc/resources/downloads/examples/oddb.yaml
+doc/resources/downloads/examples/oddb2.csv
+doc/resources/downloads/examples/oddbdat.tar.gz
+doc/resources/downloads/examples/patents.xls
+doc/resources/downloads/examples/patinfo.yaml
+doc/resources/downloads/examples/price_history.csv
+doc/resources/downloads/examples/price_history.yaml
+doc/resources/downloads/examples/swissdrug-update.xls
+doc/resources/errors/appdown.html
+doc/resources/errors/logo.png
+doc/resources/errors/logo_de.gif
+doc/resources/gcc/banner.gif
+doc/resources/gcc/logo.png
+doc/resources/gcc/logo_de.gif
+doc/resources/gcc/logo_doc.gif
+doc/resources/gcc/logo_fr.gif
+doc/resources/gcc/logo_rss.png
+doc/resources/generika/favicon.ico
+doc/resources/generika/logo.gif
+doc/resources/generika/logo_de.gif
+doc/resources/generika/logo_fr.gif
+doc/resources/homeopathy/favicon.ico
+doc/resources/homeopathy/logo.png
+doc/resources/icon_twitter.gif
+doc/resources/innova/logo.gif
+doc/resources/innova/logo_de.gif
+doc/resources/javascript/admin.js
+doc/resources/javascript/autofill.js
+doc/resources/javascript/bit.ly.js
+doc/resources/javascript/company.js
+doc/resources/javascript/dojo/Editor.js
+doc/resources/javascript/dojo/HtmlEditorToolbar.html
+doc/resources/javascript/dojo/sigma.gif
+doc/resources/javascript/widget/SymbolPalette.js
+doc/resources/javascript/widget/Tooltip.js
+doc/resources/javascript/widget/__package__.js
+doc/resources/livemarks16.png
+doc/resources/mail.gif
+doc/resources/mobile/logo.png
+doc/resources/paypal_donate.gif
+doc/resources/phyto-pharma/favicon.ico
+doc/resources/phyto-pharma/logo.png
+doc/resources/plugins/Generika.cc.gif
+doc/resources/plugins/Generika.cc.html
+doc/resources/plugins/Generika.cc.src
+doc/resources/plugins/oddb.org.gif
+doc/resources/plugins/oddb.org.html
+doc/resources/plugins/oddb.org.src
+doc/resources/print.css
+doc/resources/provita/logo_de.gif
+doc/resources/santesuisse/logo_de.gif
+doc/resources/schoenenberger/logo_de.gif
+doc/resources/swissmedic/logo.png
+doc/resources/swissmedic/logo_de.gif
+doc/resources/swissmedic/logo_doc.gif
+doc/resources/swissmedic/logo_fr.gif
+doc/resources/sympany/logo.gif
+doc/robots.txt
 etc/index_definitions.yaml
 etc/trans_handler.yml
 ext/analysisparse/bin/analysisd
@@ -81,6 +182,8 @@ ext/export/src/oddb_yaml.rb
 ext/export/src/oddbdat.rb
 ext/export/src/patent_xls.rb
 ext/export/test/test_csv_exporter.rb
+ext/export/test/test_generics_xls.rb
+ext/export/test/test_oddbdat.rb
 ext/fiparse/bin/fiparsed
 ext/fiparse/src/fachinfo_doc.rb
 ext/fiparse/src/fachinfo_hpricot.rb
@@ -799,7 +902,9 @@ test/data/html/interaction/flockhart/2D6.htm
 test/data/html/interaction/flockhart/2E1.htm
 test/data/html/interaction/flockhart/3A457.htm
 test/data/html/interaction/flockhart/clinlist.htm
+test/data/html/interaction/flockhart/prepared_table.asp
 test/data/html/interaction/flockhart/prepared_table.htm
+test/data/html/interaction/flockhart/table.asp
 test/data/html/interaction/flockhart/table.htm
 test/data/html/interaction/hayes/CYP450-1.html
 test/data/html/interaction/hayes/CYP450-2.html
@@ -901,7 +1006,6 @@ test/test_model/text.rb
 test/test_model/user.rb
 test/test_plugin/bsv_xml.rb
 test/test_plugin/comarketing.rb
-test/test_plugin/doctors.rb
 test/test_plugin/download_invoicer.rb
 test/test_plugin/flockhart.rb
 test/test_plugin/hayes.rb
@@ -921,6 +1025,7 @@ test/test_plugin/swissmedicjournal.rb
 test/test_plugin/text_info.rb
 test/test_plugin/vaccines.rb
 test/test_plugin/yaml.rb
+test/test_plugin/zdoctor.rb
 test/test_state/admin/companyuser.rb
 test/test_state/admin/login.rb
 test/test_state/admin/root.rb
@@ -947,11 +1052,11 @@ test/test_state/user/download_export.rb
 test/test_state/user/fipi_offer_input.rb
 test/test_util/config.rb
 test/test_util/csstemplate.rb
+test/test_util/exporter.rb
 test/test_util/html_parser.rb
 test/test_util/interval.rb
 test/test_util/language.rb
 test/test_util/levenshtein_distance.rb
-test/test_util/log.rb
 test/test_util/logfile.rb
 test/test_util/loggroup.rb
 test/test_util/notification_logger.rb
@@ -963,6 +1068,8 @@ test/test_util/soundex.rb
 test/test_util/suite.rb
 test/test_util/updater.rb
 test/test_util/validator.rb
+test/test_util/zlog.rb
+test/test_view/asearch.rb
 test/test_view/chapter.rb
 test/test_view/companies/companylist.rb
 test/test_view/descriptionform.rb
@@ -974,7 +1081,6 @@ test/test_view/logo.rb
 test/test_view/navigationfoot.rb
 test/test_view/pager.rb
 test/test_view/pointersteps.rb
-test/test_view/search.rb
 test/test_view/sponsorhead.rb
 test/test_view/suite.rb
 test/test_view/user/powerlink.rb