j1-template 2022.5.0.rc3 → 2022.5.1.rc0
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- checksums.yaml +4 -4
- data/_includes/themes/j1/modules/attics/generator.html +5 -13
- data/assets/data/banner.html +2 -2
- data/assets/themes/j1/adapter/js/attic.js +106 -62
- data/assets/themes/j1/adapter/js/masterslider.js +22 -5
- data/assets/themes/j1/core/css/themes/unolight/bootstrap.css +26 -1
- data/assets/themes/j1/core/css/themes/unolight/bootstrap.min.css +1 -1
- data/assets/themes/j1/modules/backstretch/js/backstretch.js +1 -1
- data/assets/themes/j1/modules/backstretch/js/v2.1.16/backstretch.js +1696 -0
- data/assets/themes/j1/modules/backstretch/js/v2.1.16/backstretch.min.js +20 -0
- data/assets/themes/j1/modules/backstretch/js/v2.1.18/backstretch.js +1627 -0
- data/assets/themes/j1/modules/backstretch/js/v2.1.18/backstretch.min.js +20 -0
- data/assets/themes/j1/modules/cryptoJS/js/rc4.js +2 -2
- data/lib/j1/version.rb +1 -1
- data/lib/starter_web/Gemfile +1 -1
- data/lib/starter_web/README.md +440 -175
- data/lib/starter_web/_config.yml +3 -3
- data/lib/starter_web/_data/blocks/banner.yml +1 -1
- data/lib/starter_web/_data/modules/attics.yml +12 -0
- data/lib/starter_web/_data/modules/defaults/attics.yml +16 -1
- data/lib/starter_web/_data/modules/defaults/masterslider.yml +1 -1
- data/lib/starter_web/_data/modules/masterslider.yml +0 -4
- data/lib/starter_web/_data/modules/navigator_menu.yml +31 -25
- data/lib/starter_web/_includes/attributes.asciidoc +2 -0
- data/lib/starter_web/_plugins/lunr_index.rb +1 -1
- data/lib/starter_web/assets/images/modules/attics/1920x1280/ben-kolde.jpg +0 -0
- data/lib/starter_web/assets/images/modules/attics/1920x1280/braden-collum.jpg +0 -0
- data/lib/starter_web/assets/images/modules/attics/1920x1280/ev.jpg +0 -0
- data/lib/starter_web/assets/images/modules/attics/1920x1280/firmbee-com.jpg +0 -0
- data/lib/starter_web/assets/images/modules/attics/1920x1280/max-harlynking.jpg +0 -0
- data/lib/starter_web/assets/images/modules/attics/guillaume-bolduc-1920x1280.jpg +0 -0
- data/lib/starter_web/assets/images/modules/attics/spacex-1920x1280.jpg +0 -0
- data/lib/starter_web/assets/videos/headers/{still → present_videos/still}/underground-broadway.jpg +0 -0
- data/lib/starter_web/assets/videos/headers/present_videos/underground-broadway.mp4 +0 -0
- data/lib/starter_web/collections/asciidoc_skeletons/simple-post/_posts/yyyy-mm-dd-your-post-name.asciidoc +3 -1
- data/lib/starter_web/collections/posts/public/featured/_posts/2021-01-01-about-cookies.adoc +3 -0
- data/lib/starter_web/collections/posts/public/featured/_posts/2021-02-01-site-generators.adoc +2 -3
- data/lib/starter_web/collections/posts/public/featured/_posts/2022-02-01-about-j1.adoc +3 -0
- data/lib/starter_web/collections/posts/public/series/_posts/2020-01-01-post-wiki-series.adoc +3 -0
- data/lib/starter_web/collections/posts/public/series/_posts/2020-01-02-post-wiki-series.adoc +3 -0
- data/lib/starter_web/collections/posts/public/series/_posts/2020-01-03-post-wiki-series.adoc +3 -0
- data/lib/starter_web/index.html +41 -7
- data/lib/starter_web/package.json +2 -2
- data/lib/starter_web/pages/public/about/features.adoc +119 -0
- data/lib/starter_web/pages/public/about/reporting_issues.adoc +78 -0
- data/lib/starter_web/pages/public/about/{about_site.adoc → site.adoc} +20 -15
- data/lib/starter_web/pages/public/asciidoc_skeletons/documentation/documentation.adoc +3 -0
- data/lib/starter_web/pages/public/asciidoc_skeletons/multi-document/multi.adoc +3 -0
- data/lib/starter_web/pages/public/asciidoc_skeletons/simple-document/simple.adoc +3 -0
- data/lib/starter_web/pages/public/blog/navigator/archive/categoryview.html +3 -0
- data/lib/starter_web/pages/public/blog/navigator/archive/dateview.html +4 -1
- data/lib/starter_web/pages/public/blog/navigator/archive/tagview.html +4 -1
- data/lib/starter_web/pages/public/blog/navigator/archive.html +4 -1
- data/lib/starter_web/pages/public/blog/navigator/index.html +4 -1
- data/lib/starter_web/pages/public/features/general.adoc +5 -1
- data/lib/starter_web/pages/public/features/template.adoc +4 -0
- data/lib/starter_web/pages/public/jupyter/examples/distributed/j1-circular-times-table.adoc +3 -0
- data/lib/starter_web/pages/public/jupyter/examples/distributed/j1-common-used-widgets.adoc +3 -0
- data/lib/starter_web/pages/public/jupyter/examples/distributed/j1-odes-in-python.adoc +3 -0
- data/lib/starter_web/pages/public/jupyter/examples/localized/j1_climate-change-forecast.adoc +3 -0
- data/lib/starter_web/pages/public/jupyter/notebooks/textbooks/j1_interactive_widgets.html +512 -512
- data/lib/starter_web/pages/public/jupyter/notebooks/textbooks/j1_nbi_widgets.html +629 -629
- data/lib/starter_web/pages/public/jupyter/notebooks/textbooks/j1_nbi_widgets_bar_chart.html +95 -95
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- data/lib/starter_web/pages/public/learn/quickstart.adoc +4 -1
- data/lib/starter_web/pages/public/learn/roundtrip/100_present_images.adoc +4 -1
- data/lib/starter_web/pages/public/learn/roundtrip/100_present_videos.adoc +16 -5
- data/lib/starter_web/pages/public/learn/roundtrip/200_typography.adoc +3 -0
- data/lib/starter_web/pages/public/learn/roundtrip/300_icon_fonts.adoc +3 -0
- data/lib/starter_web/pages/public/learn/roundtrip/400_asciidoc_extensions.adoc +3 -0
- data/lib/starter_web/pages/public/learn/roundtrip/410_bs_modals_extentions.adoc +3 -0
- data/lib/starter_web/pages/public/learn/roundtrip/420_responsive_tables_extensions.adoc +3 -0
- data/lib/starter_web/pages/public/learn/roundtrip/500_themes.adoc +3 -0
- data/lib/starter_web/pages/public/learn/roundtrip/600_quicksearch.adoc +6 -2
- data/lib/starter_web/pages/public/learn/where_to_go.adoc +3 -0
- data/lib/starter_web/pages/public/legal/de/100_copyright.adoc +3 -0
- data/lib/starter_web/pages/public/legal/de/100_impress.adoc +3 -0
- data/lib/starter_web/pages/public/legal/de/300_privacy.adoc +3 -0
- data/lib/starter_web/pages/public/legal/de/400_comment_policy.adoc +3 -0
- data/lib/starter_web/pages/public/legal/en/100_copyright.adoc +9 -1
- data/lib/starter_web/pages/public/legal/en/200_impress.adoc +10 -2
- data/lib/starter_web/pages/public/legal/en/300_privacy.adoc +3 -0
- data/lib/starter_web/pages/public/legal/en/400_comment_policy.adoc +3 -0
- data/lib/starter_web/pages/public/panels/intro_panel/panel.adoc +3 -0
- data/lib/starter_web/pages/public/plans/plans.adoc +3 -0
- data/lib/starter_web/pages/public/previewer/preview_bootstrap_theme.adoc +4 -0
- data/lib/starter_web/pages/public/se/se-fake.adoc +4 -0
- data/lib/starter_web/utilsrv/_defaults/package.json +1 -1
- data/lib/starter_web/utilsrv/package.json +1 -1
- metadata +18 -365
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- data/lib/starter_web/pages/public/_jupyter/docs/_includes/attributes.asciidoc +0 -67
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- data/lib/starter_web/pages/public/_jupyter/docs/j1-nbinteract.adoc +0 -638
- data/lib/starter_web/pages/public/_jupyter/docs/jupyterhub.adoc +0 -248
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- data/lib/starter_web/pages/public/_jupyter/notebooks/j1/.ipynb_checkpoints/j1_docs_example_dynamic-checkpoint.ipynb +0 -14478
- data/lib/starter_web/pages/public/_jupyter/notebooks/j1/.ipynb_checkpoints/j1_interactive_widgets-Copy1-checkpoint.ipynb +0 -379
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- data/lib/starter_web/pages/public/_jupyter/notebooks/j1/.ipynb_checkpoints/j1_nbi_widgets-checkpoint.ipynb +0 -523
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title: J1 NBI
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tagline: jupyter notebook integration
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date: 2022-04-17 00:00:00
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description: >
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The package j1-nbinteract aims to enable authors and educators to create and
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share interactive web pages easily. Interactive explanations of concepts are
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useful for communicating and explaining tricky concepts.
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keywords: >
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opensource, free, load, download, start, starter, example,
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high, easy, use, secure, encrypt, standard, popular,
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generate, create, learn, distribute, publish, deploy,
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beginner, advanced, expert, student, learner, educator,
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writer, reader, visitor,
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framework, toolkit, integration, extension, module, api,
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dynamic, static, generator, client, server, internet, local, localhost,
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page, web, website, webdesign, material, design, responsive,
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javascript, nodejs, ruby, windows, linux, osx, mac, os,
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http, https, html, html5, css, scss, style,
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browser, firefox, chrome, edge, opera, safari,
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configuration, generator, navigation, menu, dropdown, fab, action, button,
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application, interface, provider, api, repository,
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cookie, language, translation, gdpr, dsgvo, privacy,
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asciidoc, aciidoctor, bootstrap, jekyll, liquid,
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hyvor, disqus, git, github, netlify, heroku, apple, microsoft,
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provider, service, internet, support,
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google, analytics, advertising, search, console, silverlight, score,
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j1, nbi, j1-nbinteract, nbinteract, template, integration,
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python, jupyter, notebook, textbook, api, app,
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binder, binderhub, jupyterhub
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categories: [ J1, Integration ]
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tags: [ NBI, Notebooks, Distributed ]
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scrollbar: false
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fab_menu_id: page_ctrl
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personalization: true
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permalink: /pages/public/jupyter/docs/j1-nbinteract-docs/
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regenerate: false
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resources: [ animate, clipboard, lightbox, nbinteract, rouge ]
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resource_options:
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slides:
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alt: Photo by Yellow Cactus on Unsplash
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badge:
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type: unsplash
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author: Yellow Cactus
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href: https://unsplash.com/@yellowcactus
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---
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// Page Initializer
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:page-liquid:
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// :page--attr: <attr-value>
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:binder-badges-enabled: true
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:binder--home: https://mybinder.org/
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:binder--docs: https://mybinder.readthedocs.io/en/latest/
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:github-repo--binderhub: https://github.com/jupyterhub/binderhub
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:binder-app-launch--lab: https://mybinder.org/v2/gh/jekyll-one/j1-binder-repo/main
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:binder-app-launch--tree: https://mybinder.org/v2/gh/jekyll-one/j1-binder-repo/main?urlpath=/tree
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// Load Liquid procedures
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{% capture load_attributes %}themes/{{site.template.name}}/procedures/global/attributes_loader.proc{%endcapture%}
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ifeval::[{binder-badges-enabled} == true]
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image:/assets/images/badges/configBinder.png[Binder, link="{binder--home}", {browser-window--new}]
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image:/assets/images/badges/docsBinder.png[Binder, link="{binder--docs}", {browser-window--new}]
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endif::[]
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// Include sub-documents (if any)
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// tut: https://www.dataquest.io/blog/jupyter-notebook-tutorial/
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// tut: https://reproducible-science-curriculum.github.io/publication-RR-Jupyter/01-documentation/index.html
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// integration: https://code.visualstudio.com/docs/datascience/jupyter-notebooks
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// intro: https://jupyter-notebook-beginner-guide.readthedocs.io/en/latest/index.html
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// Books: https://jupyterbook.org/intro.html
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// 2HTML: https://stackoverflow.com/questions/35896866/how-to-export-current-notebook-in-html-on-jupyter
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// info: https://en.wikipedia.org/wiki/Galileo_Galilei
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== J1 NBI Package
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The package `j1-nbinteract` aims to enable authors and educators to create and
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share interactive web pages easily. Interactive explanations of concepts are
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useful for communicating and explaining tricky concepts.
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As a web technology, _Jupyter Notebook_ provides a platform for authoring
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interactive scientific documents. For example, the popular `ipywidgets`
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Python library allows users to create web-based user interfaces to interact
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with arbitrary Python functions. Users can create these interfaces using
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Python directly in the notebook instead of HTML and JavaScript, significantly
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lowering the time needed to create these interfaces.
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This ease of use encourages instructors and researchers to create interactive
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explanations of their work. Unfortunately, it isn't easy to *share* these
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interactive notebooks with the public. Sharing the notebook file itself
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retains full interactivity but requires *viewers* to have Jupyter, Python,
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and all other packages used in the notebook installed on their machines.
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The freely available Binder service circumvents this by hosting notebook
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servers pre-packaged with the necessary software. However, both of these
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options still require readers to have prior familiarity with the Jupyter
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environment, making them less suitable for use with non-technical people.
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Authors can convert a Jupyter notebook to a static HTML document and host
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the document as a publicly-accessible web page. However, this method does
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not preserve the interactive elements of the notebook. The resulting web
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page only contains text and images.
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.NBI textbook (excerpt)
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[source, python, role="noclip"]
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----
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# Define the plot function
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#
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def myplot(xv):
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# figsize: width, height in inches
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# Create an interactive widget for the plot using interact
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#
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interact = widgets.interact(
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myplot,
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value=pi,
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)
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interact;
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----
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lightbox::nbi-textbook--excerpt[1280, {data-nbi-textbook--excerpt}, role="mt-3 mb-4"]
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The Python package `j1-nbinteract` allows authors to convert Jupyter notebooks
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into *interactive*, standalone HTML pages: the textbooks. The interactive
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elements can use arbitrary Python code to generate output, including Python
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libraries that use C extensions (e.g., _NumPy_ and _Pandas_) and libraries
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that create images (e.g., _Matplotlib_).
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CAUTION: The current version of j1-nbinteract *1.x* is limited to Notebook v6
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(Classic Notebook). The latest version Jupyter Notebook v7 (JupyterLab) are
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supported by upcoming versions of j1-nbinteract *2.x*.
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Anyone with a modern web browser can use the resulting web pages even if
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the viewer does *not* have Python or Jupyter installed on their computer.
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To make this possible, NBI uses the freely available cloud service _Binder_.
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Two communication libraries are used to interact with the _BinderHub_ and the
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_JupyterHub_ services
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You can find an overview of these services and their communication interfaces
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at:
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* link:{url-j1-docs-binderhub--remote}[BinderHub, {browser-window--new}]
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* link:{url-j1-docs-jupyterhub--remote}[JupyterHub, {browser-window--new}]
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TIP: The `nbinteract` package also includes additional methods for interactive
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plots (widgets) designed for very fast interaction prototyping in the notebook
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and smooth interaction on static HTML web pages.
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== J1 NBI Integration
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as resource record `nbinteract` (see: `~/_data/resources.yml`)
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* an J1 adapter `nbinteract.js` for integration
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* a module configuration `nbinteract.yml`
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* an Asciidoc Extension `textbook::` to integrate textbooks (in webpages)
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The built-in Starter Web of the template comes with a suitable J1 NBI
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configuration and documents for testing. You can find examples of pages that
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contain interactive textbooks under the menu `Lern` underneath the submenu
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`Juyper Notebooks`.
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WARNING: To develop your *Jupyter Notebooks*, a *local* installation of the
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*Python* programming language is required. For the development of Jupyter
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Notebooks, the *Jupyter* package and the installation of the library
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*nbinteract* are expected.
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The module for J1 NBI integration is available as a stable version. However,
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it is still in an experimental state. The main reason for that experimental
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status is the *age* of the base library `nbinteract-core` of version v0.2.6.
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version of the Jupyter Notebook V7 application (JupyterLab), unfortunately,
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=== Notebooks vs. Textbooks
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Jupyter Notebooks to be viewed in a web browser.
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`.ipynb` are to be *exported* to HTML (text) files using the (Python)
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program `nbinteract`. Textbooks that have already been exported can be found
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for the *Starter Web* in the folder `~/pages/public/jupyter/notebooks/textbooks`.
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== J1 NBI Configuration
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The Template system J1 integrates the Javascript (core) library
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`j1-nbinteract-core.js` from NBI (j1-nbinteract). The integration is a J1
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module that requires *no programming* to integrate interactive textbooks in
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your webpages.
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WARNING: The (core) library integrated with J1 can *only* used with the
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Template System J1. The library `j1-nbinteract-core` is modified for the use
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with J1, allowing seamless integration between NBI and the pages of a J1 Web.
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=== Modul configuration
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As with all modules available with J1, *no programming* is required. An
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adapter for the template system takes the necessary steps for integration,
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so easy integration into your website is possible using the module
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configuration.
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==== Default settings
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Find all parameters used for the default settings below. The configuration
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file is `~/_data/default/nbinteract.yml`.
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.Default settings
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[cols="3a,4a,5a", subs=+macros, options="header", width="100%", role="rtable mt-3"]
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|`preferred`
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|`<baseUrl> \| <provider>`
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|Defines the provider and the *public* repo to be used by the
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*Binder* service.
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|`provider_spec`
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|`<user>/<repo>/<branch>`
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|Defines the *public* repo the configuration data is available to be read
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by the *Binder* service.
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|`baseUrl`
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|`https://mybinder.org`
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|Base URL of the *Binder* service.
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|`provider_id`
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|gh\|gist\|gl\|zenodo
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|Provider of the *public* repo. +
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`gh`, GitHub +
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`gist`, GitHub Gist +
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`gl`, GitLab +
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`zenodo`, Zenodo Org
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|`button_styles`
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|CSS styles
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|For *Bootstrap*, styles like `btn btn-primary btn-raised ` can be used.
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|`show_nbi_messages`
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|`true`\|`false`
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|Show info\|progress\|error messages while nbinteract is being initialized.
|
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Messges are shown in (Bootstrap) modals. +
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Default: `false`
|
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|`indicate_nbi_activity`
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|`true`\|`false`
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|Show a spinner while nbinteract in being initialized.
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Default: `true`
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|
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|`nbi_messages_auto_close`
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|`true`\|`false`
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|Close the nbi messages modals automatically. +
|
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Default: `true`
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|`nbi_init_timeout`
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|`integer`
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|Time (ms) textbooks on a page are to be finally initialized. If the
|
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init phase tooks longer, an error is issued. +
|
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Default: `180000` (3 min)
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-
|
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|`nbi_messages_auto_close_delay`
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|`integer`
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|Delay (ms) to auto-close nbi messages modal. +
|
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Default: `3500` (3.5 sec)
|
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|
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|`nbi_init_mathjax`
|
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|`true`\|`false`
|
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|Load and initialize the MathJax JS library. +
|
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|
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Default: `true`
|
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|
-
|
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|
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|===
|
325
|
-
|
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WARNING: In the current implementation of NBI for J1, the JS library *MathJax*
|
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*may* interfere with the HTML output of other pages of a J1 website. Integrating
|
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the MatJax JS library may result in *strange outcomes* for other contents.
|
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For that reason, the MathJax library should be used *carefully* for the
|
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time being.
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|
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|
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.Example settings (`~/_data/default/nbinteract.yml`)
|
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|
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[source, yaml]
|
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|
-
----
|
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|
-
# ------------------------------------------------------------------------------
|
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|
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# Default settings
|
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|
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#
|
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defaults:
|
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-
|
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# ----------------------------------------------------------------------------
|
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# Binder access
|
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# ----------------------------------------------------------------------------
|
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-
|
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# Binder baseUrls (all members of the Binder Org Federation)
|
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# ----------------------------------------------------------------------------
|
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|
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#
|
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baseUrls:
|
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preferred: mybinder
|
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mybinder: 'https://mybinder.org' # Binder Org
|
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gke: 'https://gke.mybinder.org' # Google Cloud
|
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ovh: 'https://ovh.mybinder.org' # OVH Cloud
|
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gesis: 'https://gesis.mybinder.org' # GESIS Notebooks
|
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turing: 'https://turing.mybinder.org' # Alan Turing Institute
|
354
|
-
|
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|
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# Provider specs
|
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# ----------------------------------------------------------------------------
|
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|
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#
|
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|
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providers:
|
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preferred: github # github
|
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|
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github:
|
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provider_id: gh
|
362
|
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provider_spec: jekyll-one/j1-binder-repo/main # config: requirements.txt
|
363
|
-
zenodo:
|
364
|
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provider_id: zenodo
|
365
|
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provider_spec: 10.5281/zenodo.6721479 # 2nd version, config: requirements.txt
|
366
|
-
|
367
|
-
# ----------------------------------------------------------------------------
|
368
|
-
# Module settings
|
369
|
-
# ----------------------------------------------------------------------------
|
370
|
-
|
371
|
-
show_nbi_messages: false
|
372
|
-
indicate_nbi_activity: true
|
373
|
-
nbi_messages_auto_close: true
|
374
|
-
|
375
|
-
nbi_init_timeout: 180000
|
376
|
-
nbi_messages_auto_close_delay: 3500
|
377
|
-
|
378
|
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nbi_init_mathjax: true
|
379
|
-
notebook_ready: first_widget
|
380
|
-
----
|
381
|
-
|
382
|
-
==== Textbook settings
|
383
|
-
|
384
|
-
Find all parameters used for the textbook settings below. The configuration
|
385
|
-
file is `~/_data/nbinteract.yml`.
|
386
|
-
|
387
|
-
.Textbook settings
|
388
|
-
[cols="3a,4a,5a", options="header", width="100%", role="rtable mt-3"]
|
389
|
-
|===
|
390
|
-
|Paramter |Value |Description
|
391
|
-
|
392
|
-
|`enabled`
|
393
|
-
|`true`\|`false`
|
394
|
-
|Enables\|Disables the use of a notebook. If disabled, *no* J1 adapter
|
395
|
-
setting are generated for this Jupyter Notebook. +
|
396
|
-
Default: `true`
|
397
|
-
|
398
|
-
|`id`
|
399
|
-
|`string`
|
400
|
-
|The id of a notebook that is used by the *Asciidoc Extension*
|
401
|
-
`textbook::<id>[]` to place the HTML portion for the HTML code
|
402
|
-
of an exported Jupyter Notebook. +
|
403
|
-
Default: `no default`
|
404
|
-
|
405
|
-
|`xhr_data`
|
406
|
-
|`string`
|
407
|
-
|The name of the exported HTML data file of a Jupyter Notebook. +
|
408
|
-
Default: `no default`
|
409
|
-
|
410
|
-
|`xhr_data_path`
|
411
|
-
|`path`
|
412
|
-
|The (data) path the Jupyter Notebook is exported. +
|
413
|
-
Default: `no default`
|
414
|
-
|
415
|
-
|`use_mathjax`
|
416
|
-
|`true`\|`false`
|
417
|
-
|This is a per notebook setting to enable mathjax processing. In general
|
418
|
-
`nbi_init_mathjax` from *default* settings are be set to `true` (enabled). +
|
419
|
-
Default: `false`
|
420
|
-
|
421
|
-
|===
|
422
|
-
|
423
|
-
.Example settings (~/_data/nbinteract.yml)
|
424
|
-
[source, yaml]
|
425
|
-
----
|
426
|
-
# ------------------------------------------------------------------------------
|
427
|
-
# User configuration settings
|
428
|
-
#
|
429
|
-
settings:
|
430
|
-
|
431
|
-
textbooks:
|
432
|
-
|
433
|
-
# --------------------------------------------------------------------------
|
434
|
-
# interactive_widgets
|
435
|
-
#
|
436
|
-
- textbook:
|
437
|
-
enabled: true
|
438
|
-
|
439
|
-
id: j1_docs_example_dynamic
|
440
|
-
xhr_data: j1_docs_example_dynamic.html
|
441
|
-
xhr_data_path: /pages/public/jupyter/notebooks/textbooks
|
442
|
-
use_mathjax: false
|
443
|
-
----
|
444
|
-
|
445
|
-
=== Binder configuration
|
446
|
-
|
447
|
-
The use of J1 NBI requires a valid Binder configuration. The binder
|
448
|
-
configuration is to be provided via a public Git repo. An example of such a
|
449
|
-
Git repo you find on Github at
|
450
|
-
link:{url-j1--gh-binder-repo}[J1 Binder Repo, {browser-window--new}].
|
451
|
-
The configuration settings are described in the <<Default settings>> section.
|
452
|
-
|
453
|
-
=== Textbook configuration
|
454
|
-
|
455
|
-
Besides the default settings for J1 NBI (`~/_data/default/nbinteract.yml`),
|
456
|
-
*individual* settings for each textbook (nbinteract HTML textebook) are
|
457
|
-
required to include textbooks in webpages. You find examples in the
|
458
|
-
configuration file `~/_data/nbinteract.yml`, a description of the parameters
|
459
|
-
used in the <<Textbook settings>> section.
|
460
|
-
|
461
|
-
=== Textbook integration
|
462
|
-
|
463
|
-
For integrating textbooks (nbinteract HTML notebook) into web pages, the
|
464
|
-
resource of J1 NBI Module is required. The `ID` of the module of the J1 NBI
|
465
|
-
integration is: `nbinteract`.
|
466
|
-
|
467
|
-
.Example of a Frontmatter for a page using Textbooks
|
468
|
-
[source, yaml, role="noclip"]
|
469
|
-
----
|
470
|
-
title: J1 NbInteract
|
471
|
-
tagline: nbi integration
|
472
|
-
date: 2022-04-17 00:00:00
|
473
|
-
description: >
|
474
|
-
Things you should know about this site,
|
475
|
-
the people and the software and/or
|
476
|
-
services provided.
|
477
|
-
|
478
|
-
categories: [ J1, Integration ]
|
479
|
-
tags: [ NBI, nbinteract ]
|
480
|
-
|
481
|
-
scrollbar: false
|
482
|
-
fab_menu_id: page_ctrl
|
483
|
-
personalization: true <1>
|
484
|
-
|
485
|
-
permalink: /pages/public/jupyter/docs/j1-nbinteract-docs/
|
486
|
-
regenerate: false
|
487
|
-
|
488
|
-
resources: [ nbinteract, rouge ] <2>
|
489
|
-
----
|
490
|
-
<1> Binder's services require *Personalization* accepted in the users
|
491
|
-
*cookie* settings. Difficulties with the rules of privacy should be
|
492
|
-
explicitly pointed out and responded to in a suitable form if the cookie
|
493
|
-
settings of the visitor do not allow this.
|
494
|
-
<2> If highlighting the source code parts is desired in a textbook, the
|
495
|
-
`rouge` module must included as well.
|
496
|
-
|
497
|
-
Once the configuration steps for using J1 NBI have been completed, integrating
|
498
|
-
textbooks is very easy. The Asciidoc extension `textbook::` can include a
|
499
|
-
textbook (nbinteract HTML Notebook) anywhere.
|
500
|
-
|
501
|
-
.General syntax
|
502
|
-
[source, conf, role="noclip"]
|
503
|
-
----
|
504
|
-
textbook::<notebook-id>[]
|
505
|
-
----
|
506
|
-
|
507
|
-
Einbinden des Textbooks mit der ID `j1_docs_example_dynamic` in eine Webseite.
|
508
|
-
|
509
|
-
.Example
|
510
|
-
[source, conf]
|
511
|
-
----
|
512
|
-
textbook::j1_docs_example_dynamic[]
|
513
|
-
----
|
514
|
-
|
515
|
-
|
516
|
-
== NBI Textbook examples
|
517
|
-
|
518
|
-
For the J1 template, textbooks are typically integrated as *dynamic* HTML
|
519
|
-
pages. In addition to the dynamic pages, textbooks can also be integrated as
|
520
|
-
*static* HTML code. You can find examples for both variants in the following
|
521
|
-
sections.
|
522
|
-
|
523
|
-
=== Static Textbook
|
524
|
-
|
525
|
-
The `nbconvert` tool converts *Jupyter Notebooks* to various other formats via
|
526
|
-
Jinja templates. The tool allows you to convert an .ipynb notebook file into
|
527
|
-
various *static* formats. For more details, refer to
|
528
|
-
link:{url-nbconvert--doc}[nbconvert - usage, {browser-window--new}].
|
529
|
-
|
530
|
-
.Generate a static textbook
|
531
|
-
[source, sh]
|
532
|
-
----
|
533
|
-
jupyter nbconvert --execute --to html <full_path_to>/<notebook.ipynb>
|
534
|
-
----
|
535
|
-
|
536
|
-
Below you find an static HTML output (Textbook) generated via `nbconvert`.
|
537
|
-
|
538
|
-
include::{documentdir}/j1_docs_example_static.asciidoc[]
|
539
|
-
|
540
|
-
=== Interactive Textbook
|
541
|
-
|
542
|
-
*Interactive* Textbooks are generated using `nbinteract`:
|
543
|
-
|
544
|
-
.Generate an interactive textbook
|
545
|
-
[source, sh]
|
546
|
-
----
|
547
|
-
nbinteract <full_path_to>/<notebook.ipynb> -t plain -s fake/fake
|
548
|
-
----
|
549
|
-
|
550
|
-
textbook::j1_docs_example_dynamic[]
|
551
|
-
|
552
|
-
=== Conclusion
|
553
|
-
|
554
|
-
Compare both textbook versions, dynamic versus static, in terms of
|
555
|
-
*interactivity*. Again, compare the _Evaluation_ section at section
|
556
|
-
<<Interactive Textbook>> with the static conterpart at <<Static Textbook>>.
|
557
|
-
|
558
|
-
|
559
|
-
== Jupyter Basics
|
560
|
-
|
561
|
-
To understand this documentation better, below you find a brief description
|
562
|
-
of JupyterHub (JH) and the three base components of Jupyter Notebook (JN).
|
563
|
-
|
564
|
-
=== The Jupyter Project
|
565
|
-
|
566
|
-
The Jupyter Project is a non-profit organization founded in 2014 by
|
567
|
-
_Fernando Perez_. The Jupyter project supports interactive scientific
|
568
|
-
Data evaluations and scientific calculations. The main applications provided
|
569
|
-
by the Jupyter Project are:
|
570
|
-
|
571
|
-
* Jupyter Notebook (JN)
|
572
|
-
* JupyterHub (JH)
|
573
|
-
|
574
|
-
NOTE: The name _Jupyter_ refers to the three main programming languages
|
575
|
-
_Julia_, _Python_ and _R_ supported by the Jupyter Notebook App. The
|
576
|
-
name _Jupyter_ is a homage to the notebook entries by _Galileo Galilei_
|
577
|
-
on the discovery of the moons of Jupiter, where he made his observations
|
578
|
-
and the measurement data together.
|
579
|
-
|
580
|
-
Jupyter Notebook (JN) is an open source web application that allows data
|
581
|
-
scientists to create and share documents that include live code, equations,
|
582
|
-
and other multimedia resources. JN combines two components:
|
583
|
-
|
584
|
-
Web application::
|
585
|
-
a browser-based tool for interactive authoring of documents which combine
|
586
|
-
explanatory text, mathematics, computations and their rich media output.
|
587
|
-
|
588
|
-
Notebook documents::
|
589
|
-
a representation of all content visible in the web application, including
|
590
|
-
inputs and outputs of the computations, explanatory text, mathematics,
|
591
|
-
images, and rich media representations of objects.
|
592
|
-
|
593
|
-
=== Jupyter Notebook App
|
594
|
-
|
595
|
-
The Jupyter Notebook *App* is a server-client application that allows editing
|
596
|
-
and running notebook documents via a web browser. The Notebook App can be
|
597
|
-
executed on a local desktop requiring no internet access or can be installed
|
598
|
-
on a remote server and accessed through the internet.
|
599
|
-
|
600
|
-
=== Notebook documents
|
601
|
-
|
602
|
-
Notebook documents (or *notebooks* for short) are documents created by the
|
603
|
-
Notebook App, and both computer code (e.g., Python) and rich text may contain
|
604
|
-
elements (paragraphs, equations, figures, links, etc.). Notebook documents are
|
605
|
-
human-readable documents, alongside code descriptions and results (figures,
|
606
|
-
tables, etc.).
|
607
|
-
|
608
|
-
=== Kernels
|
609
|
-
|
610
|
-
Generally, a notebook *kernel* is a *calculating machine* that lives in the
|
611
|
-
Jupyter Notebook App to process a Notebook document and executes its
|
612
|
-
code. The *Ipython* kernel, used for the NBI integration, runs _Python_
|
613
|
-
code, and produces the results.
|
614
|
-
|
615
|
-
=== JupyterHub
|
616
|
-
|
617
|
-
_JupyterHub_ (JH) brings the power of notebooks to *groups* of users. It
|
618
|
-
gives users access to computational environments and resources without
|
619
|
-
burdening the users with installation and maintenance tasks. Users can get
|
620
|
-
their work done in their own workspaces on shared resources which can be
|
621
|
-
managed efficiently by system administrators without having the Jupyter
|
622
|
-
Notebook App (JN) locally installed on their systems.
|
623
|
-
|
624
|
-
JupyterHub runs in the cloud or on hardware hosted on your own and makes
|
625
|
-
it possible to serve a pre-configured data science environment to any user.
|
626
|
-
It is customizable and scalable and is suitable for small and large teams,
|
627
|
-
academic courses, and large-scale infrastructure (for example like the
|
628
|
-
Binder service).
|
629
|
-
|
630
|
-
== Binder
|
631
|
-
|
632
|
-
Binder allows you to create custom computing environments that can be
|
633
|
-
shared and used by many remote users. A Binder service is powered by
|
634
|
-
link:{github-repo--binderhub}[BinderHub Repo on Github, {browser-window--new}],
|
635
|
-
an open-source tool that runs on Kubernetes, a portable, extensible,
|
636
|
-
open-source platform for managing containerized services. One such deployment
|
637
|
-
lives at link:{binder--home}[Binder Home, {browser-window--new}], and is free
|
638
|
-
to use.
|