gsl 1.15.3 → 1.16.0.6

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Files changed (446) hide show
  1. checksums.yaml +7 -0
  2. data/.gitignore +12 -0
  3. data/.travis.yml +24 -0
  4. data/AUTHORS +10 -2
  5. data/COPYING +341 -339
  6. data/ChangeLog +612 -554
  7. data/Gemfile +4 -0
  8. data/README.md +77 -0
  9. data/Rakefile +14 -93
  10. data/THANKS +1 -1
  11. data/examples/blas/blas.rb +1 -1
  12. data/examples/bspline.rb +3 -3
  13. data/examples/complex/functions.rb +4 -4
  14. data/examples/complex/mul.rb +1 -1
  15. data/examples/const/physconst.rb +4 -4
  16. data/examples/const/travel.rb +4 -4
  17. data/examples/eigen/nonsymmv.rb +1 -1
  18. data/examples/eigen/qhoscillator.rb +3 -3
  19. data/examples/fft/radix2.rb +1 -1
  20. data/examples/fft/real-halfcomplex.rb +3 -3
  21. data/examples/fft/real-halfcomplex2.rb +3 -3
  22. data/examples/fit/expfit.rb +1 -1
  23. data/examples/fit/multifit.rb +1 -1
  24. data/examples/fit/ndlinear.rb +44 -44
  25. data/examples/fit/nonlinearfit.rb +1 -1
  26. data/examples/fit/wlinear.rb +3 -3
  27. data/examples/function/function.rb +1 -1
  28. data/examples/function/min.rb +1 -1
  29. data/examples/function/synchrotron.rb +2 -2
  30. data/examples/gallery/koch.rb +1 -1
  31. data/examples/histogram/cauchy.rb +2 -2
  32. data/examples/histogram/exponential.rb +1 -1
  33. data/examples/histogram/histo3d.rb +1 -1
  34. data/examples/histogram/histogram-pdf.rb +2 -2
  35. data/examples/histogram/xexp.rb +1 -1
  36. data/examples/integration/ahmed.rb +2 -2
  37. data/examples/integration/cosmology.rb +7 -7
  38. data/examples/integration/friedmann.rb +4 -4
  39. data/examples/integration/qng.rb +1 -1
  40. data/examples/interp/demo.rb +2 -2
  41. data/examples/linalg/LQ_solve.rb +1 -1
  42. data/examples/linalg/LU.rb +1 -1
  43. data/examples/linalg/LU2.rb +1 -1
  44. data/examples/linalg/LU_narray.rb +1 -1
  45. data/examples/linalg/PTLQ.rb +1 -1
  46. data/examples/linalg/QRPT.rb +1 -1
  47. data/examples/linalg/chol.rb +1 -1
  48. data/examples/linalg/chol_narray.rb +1 -1
  49. data/examples/linalg/complex.rb +1 -1
  50. data/examples/math/elementary.rb +1 -1
  51. data/examples/math/functions.rb +1 -1
  52. data/examples/math/inf_nan.rb +1 -1
  53. data/examples/math/minmax.rb +1 -1
  54. data/examples/math/power.rb +1 -1
  55. data/examples/math/test.rb +1 -1
  56. data/examples/min.rb +1 -1
  57. data/examples/multimin/bundle.rb +1 -1
  58. data/examples/multimin/cqp.rb +17 -17
  59. data/examples/multiroot/fsolver3.rb +1 -1
  60. data/examples/odeiv/binarysystem.rb +12 -12
  61. data/examples/odeiv/demo.rb +3 -3
  62. data/examples/odeiv/frei1.rb +7 -7
  63. data/examples/odeiv/frei2.rb +4 -4
  64. data/examples/odeiv/oscillator.rb +1 -1
  65. data/examples/odeiv/sedov.rb +3 -3
  66. data/examples/odeiv/whitedwarf.rb +11 -11
  67. data/examples/permutation/ex1.rb +2 -2
  68. data/examples/permutation/permutation.rb +1 -1
  69. data/examples/poly/demo.rb +1 -1
  70. data/examples/random/diffusion.rb +1 -1
  71. data/examples/random/generator.rb +2 -2
  72. data/examples/random/randomwalk.rb +3 -3
  73. data/examples/random/rng.rb +1 -1
  74. data/examples/roots/bisection.rb +1 -1
  75. data/examples/roots/brent.rb +1 -1
  76. data/examples/roots/demo.rb +1 -1
  77. data/examples/roots/newton.rb +2 -2
  78. data/examples/roots/recombination.gp +0 -1
  79. data/examples/sf/hyperg.rb +1 -1
  80. data/examples/sf/sphbessel.rb +1 -1
  81. data/examples/sort/sort.rb +1 -1
  82. data/examples/tamu_anova.rb +4 -4
  83. data/examples/vector/add.rb +1 -1
  84. data/examples/vector/decimate.rb +1 -1
  85. data/examples/vector/gnuplot.rb +8 -8
  86. data/examples/vector/vector.rb +2 -2
  87. data/examples/wavelet/wavelet1.rb +1 -1
  88. data/ext/{alf.c → gsl_native/alf.c} +10 -10
  89. data/ext/{array.c → gsl_native/array.c} +70 -159
  90. data/ext/{array_complex.c → gsl_native/array_complex.c} +63 -66
  91. data/ext/{blas.c → gsl_native/blas.c} +2 -3
  92. data/ext/{blas1.c → gsl_native/blas1.c} +35 -36
  93. data/ext/{blas2.c → gsl_native/blas2.c} +57 -62
  94. data/ext/{blas3.c → gsl_native/blas3.c} +57 -58
  95. data/ext/{block.c → gsl_native/block.c} +14 -18
  96. data/ext/{block_source.c → gsl_native/block_source.h} +110 -112
  97. data/ext/gsl_native/bspline.c +122 -0
  98. data/ext/{bundle.c → gsl_native/bundle.c} +0 -0
  99. data/ext/{cdf.c → gsl_native/cdf.c} +79 -93
  100. data/ext/{cheb.c → gsl_native/cheb.c} +78 -89
  101. data/ext/{combination.c → gsl_native/combination.c} +11 -19
  102. data/ext/{common.c → gsl_native/common.c} +9 -41
  103. data/ext/{complex.c → gsl_native/complex.c} +116 -118
  104. data/ext/gsl_native/const.c +331 -0
  105. data/ext/{const_additional.c → gsl_native/const_additional.c} +13 -34
  106. data/ext/gsl_native/cqp.c +283 -0
  107. data/ext/{deriv.c → gsl_native/deriv.c} +25 -33
  108. data/ext/{dht.c → gsl_native/dht.c} +23 -31
  109. data/ext/{diff.c → gsl_native/diff.c} +26 -28
  110. data/ext/{dirac.c → gsl_native/dirac.c} +45 -46
  111. data/ext/{eigen.c → gsl_native/eigen.c} +1044 -1095
  112. data/ext/{error.c → gsl_native/error.c} +18 -18
  113. data/ext/gsl_native/extconf.rb +118 -0
  114. data/ext/{fft.c → gsl_native/fft.c} +197 -204
  115. data/ext/{fit.c → gsl_native/fit.c} +17 -18
  116. data/ext/gsl_native/fresnel.c +312 -0
  117. data/ext/{function.c → gsl_native/function.c} +37 -43
  118. data/ext/{geometry.c → gsl_native/geometry.c} +16 -16
  119. data/ext/{graph.c → gsl_native/graph.c} +39 -89
  120. data/ext/{gsl.c → gsl_native/gsl.c} +12 -33
  121. data/ext/{gsl_narray.c → gsl_native/gsl_narray.c} +20 -30
  122. data/ext/{histogram.c → gsl_native/histogram.c} +133 -160
  123. data/ext/{histogram2d.c → gsl_native/histogram2d.c} +78 -104
  124. data/ext/{histogram3d.c → gsl_native/histogram3d.c} +76 -76
  125. data/ext/{histogram3d_source.c → gsl_native/histogram3d_source.c} +196 -197
  126. data/ext/{histogram_find.c → gsl_native/histogram_find.c} +32 -34
  127. data/ext/{histogram_oper.c → gsl_native/histogram_oper.c} +43 -52
  128. data/ext/{ieee.c → gsl_native/ieee.c} +9 -21
  129. data/{include → ext/gsl_native/include}/rb_gsl.h +4 -26
  130. data/{include → ext/gsl_native/include}/rb_gsl_array.h +15 -39
  131. data/{include → ext/gsl_native/include}/rb_gsl_cheb.h +0 -2
  132. data/{include → ext/gsl_native/include}/rb_gsl_common.h +61 -61
  133. data/{include → ext/gsl_native/include}/rb_gsl_complex.h +1 -1
  134. data/{include → ext/gsl_native/include}/rb_gsl_const.h +0 -6
  135. data/ext/gsl_native/include/rb_gsl_dirac.h +6 -0
  136. data/{include → ext/gsl_native/include}/rb_gsl_eigen.h +1 -1
  137. data/{include → ext/gsl_native/include}/rb_gsl_fft.h +0 -13
  138. data/{include → ext/gsl_native/include}/rb_gsl_fit.h +0 -2
  139. data/{include → ext/gsl_native/include}/rb_gsl_function.h +0 -4
  140. data/{include → ext/gsl_native/include}/rb_gsl_graph.h +2 -4
  141. data/{include → ext/gsl_native/include}/rb_gsl_histogram.h +8 -8
  142. data/{include → ext/gsl_native/include}/rb_gsl_histogram3d.h +50 -50
  143. data/{include → ext/gsl_native/include}/rb_gsl_integration.h +1 -1
  144. data/{include → ext/gsl_native/include}/rb_gsl_interp.h +0 -5
  145. data/{include → ext/gsl_native/include}/rb_gsl_linalg.h +2 -6
  146. data/{include → ext/gsl_native/include}/rb_gsl_math.h +0 -6
  147. data/{include → ext/gsl_native/include}/rb_gsl_odeiv.h +0 -3
  148. data/{include → ext/gsl_native/include}/rb_gsl_poly.h +3 -7
  149. data/{include → ext/gsl_native/include}/rb_gsl_rational.h +1 -8
  150. data/{include → ext/gsl_native/include}/rb_gsl_rng.h +0 -1
  151. data/{include → ext/gsl_native/include}/rb_gsl_root.h +1 -1
  152. data/{include → ext/gsl_native/include}/rb_gsl_sf.h +39 -48
  153. data/{include → ext/gsl_native/include}/rb_gsl_statistics.h +1 -1
  154. data/{include → ext/gsl_native/include}/rb_gsl_tensor.h +0 -2
  155. data/{include → ext/gsl_native/include}/rb_gsl_with_narray.h +3 -1
  156. data/{include → ext/gsl_native/include}/templates_off.h +0 -0
  157. data/{include → ext/gsl_native/include}/templates_on.h +1 -1
  158. data/ext/{integration.c → gsl_native/integration.c} +164 -189
  159. data/ext/{interp.c → gsl_native/interp.c} +25 -38
  160. data/ext/gsl_native/jacobi.c +733 -0
  161. data/ext/{linalg.c → gsl_native/linalg.c} +462 -589
  162. data/ext/{linalg_complex.c → gsl_native/linalg_complex.c} +93 -106
  163. data/ext/{math.c → gsl_native/math.c} +48 -67
  164. data/ext/{matrix.c → gsl_native/matrix.c} +13 -16
  165. data/ext/{matrix_complex.c → gsl_native/matrix_complex.c} +119 -123
  166. data/ext/{matrix_double.c → gsl_native/matrix_double.c} +79 -82
  167. data/ext/{matrix_int.c → gsl_native/matrix_int.c} +53 -54
  168. data/ext/{matrix_source.c → gsl_native/matrix_source.h} +292 -318
  169. data/ext/{min.c → gsl_native/min.c} +45 -76
  170. data/ext/{monte.c → gsl_native/monte.c} +50 -64
  171. data/ext/{multifit.c → gsl_native/multifit.c} +142 -151
  172. data/ext/{multimin.c → gsl_native/multimin.c} +64 -92
  173. data/ext/{multimin_fsdf.c → gsl_native/multimin_fsdf.c} +16 -16
  174. data/ext/{multiroots.c → gsl_native/multiroots.c} +73 -76
  175. data/ext/{multiset.c → gsl_native/multiset.c} +4 -8
  176. data/ext/{ndlinear.c → gsl_native/ndlinear.c} +320 -321
  177. data/ext/{nmf.c → gsl_native/nmf.c} +11 -11
  178. data/ext/{nmf_wrap.c → gsl_native/nmf_wrap.c} +1 -1
  179. data/ext/{ntuple.c → gsl_native/ntuple.c} +23 -23
  180. data/ext/{odeiv.c → gsl_native/odeiv.c} +101 -116
  181. data/ext/gsl_native/ool.c +879 -0
  182. data/ext/{permutation.c → gsl_native/permutation.c} +39 -37
  183. data/ext/{poly.c → gsl_native/poly.c} +10 -13
  184. data/ext/{poly2.c → gsl_native/poly2.c} +16 -16
  185. data/ext/{poly_source.c → gsl_native/poly_source.h} +249 -293
  186. data/ext/{qrng.c → gsl_native/qrng.c} +9 -20
  187. data/ext/{randist.c → gsl_native/randist.c} +222 -247
  188. data/ext/{rational.c → gsl_native/rational.c} +12 -12
  189. data/ext/{rng.c → gsl_native/rng.c} +30 -47
  190. data/ext/{root.c → gsl_native/root.c} +47 -48
  191. data/ext/{sf.c → gsl_native/sf.c} +196 -244
  192. data/ext/{sf_airy.c → gsl_native/sf_airy.c} +2 -2
  193. data/ext/{sf_bessel.c → gsl_native/sf_bessel.c} +7 -7
  194. data/ext/{sf_clausen.c → gsl_native/sf_clausen.c} +1 -1
  195. data/ext/{sf_coulomb.c → gsl_native/sf_coulomb.c} +40 -40
  196. data/ext/{sf_coupling.c → gsl_native/sf_coupling.c} +30 -30
  197. data/ext/{sf_dawson.c → gsl_native/sf_dawson.c} +1 -1
  198. data/ext/{sf_debye.c → gsl_native/sf_debye.c} +1 -10
  199. data/ext/{sf_dilog.c → gsl_native/sf_dilog.c} +1 -1
  200. data/ext/{sf_elementary.c → gsl_native/sf_elementary.c} +3 -3
  201. data/ext/{sf_ellint.c → gsl_native/sf_ellint.c} +43 -43
  202. data/ext/{sf_elljac.c → gsl_native/sf_elljac.c} +3 -3
  203. data/ext/{sf_erfc.c → gsl_native/sf_erfc.c} +1 -5
  204. data/ext/{sf_exp.c → gsl_native/sf_exp.c} +3 -3
  205. data/ext/{sf_expint.c → gsl_native/sf_expint.c} +2 -12
  206. data/ext/{sf_fermi_dirac.c → gsl_native/sf_fermi_dirac.c} +1 -1
  207. data/ext/{sf_gamma.c → gsl_native/sf_gamma.c} +2 -6
  208. data/ext/{sf_gegenbauer.c → gsl_native/sf_gegenbauer.c} +1 -1
  209. data/ext/{sf_hyperg.c → gsl_native/sf_hyperg.c} +1 -1
  210. data/ext/{sf_laguerre.c → gsl_native/sf_laguerre.c} +4 -4
  211. data/ext/{sf_lambert.c → gsl_native/sf_lambert.c} +1 -1
  212. data/ext/{sf_legendre.c → gsl_native/sf_legendre.c} +1 -1
  213. data/ext/{sf_log.c → gsl_native/sf_log.c} +4 -4
  214. data/ext/gsl_native/sf_mathieu.c +235 -0
  215. data/ext/{sf_power.c → gsl_native/sf_power.c} +1 -1
  216. data/ext/{sf_psi.c → gsl_native/sf_psi.c} +3 -12
  217. data/ext/{sf_synchrotron.c → gsl_native/sf_synchrotron.c} +1 -1
  218. data/ext/{sf_transport.c → gsl_native/sf_transport.c} +1 -1
  219. data/ext/{sf_trigonometric.c → gsl_native/sf_trigonometric.c} +4 -4
  220. data/ext/{sf_zeta.c → gsl_native/sf_zeta.c} +1 -5
  221. data/ext/{signal.c → gsl_native/signal.c} +63 -68
  222. data/ext/{siman.c → gsl_native/siman.c} +45 -49
  223. data/ext/{sort.c → gsl_native/sort.c} +6 -7
  224. data/ext/{spline.c → gsl_native/spline.c} +28 -46
  225. data/ext/{stats.c → gsl_native/stats.c} +105 -118
  226. data/ext/{sum.c → gsl_native/sum.c} +34 -34
  227. data/ext/{tamu_anova.c → gsl_native/tamu_anova.c} +1 -1
  228. data/ext/{tensor.c → gsl_native/tensor.c} +8 -11
  229. data/ext/{tensor_source.c → gsl_native/tensor_source.h} +147 -148
  230. data/ext/{vector.c → gsl_native/vector.c} +11 -14
  231. data/ext/{vector_complex.c → gsl_native/vector_complex.c} +179 -184
  232. data/ext/{vector_double.c → gsl_native/vector_double.c} +178 -183
  233. data/ext/{vector_int.c → gsl_native/vector_int.c} +27 -29
  234. data/ext/{vector_source.c → gsl_native/vector_source.h} +428 -443
  235. data/ext/{wavelet.c → gsl_native/wavelet.c} +224 -246
  236. data/gsl.gemspec +29 -0
  237. data/lib/gsl.rb +8 -3
  238. data/lib/gsl/gnuplot.rb +3 -3
  239. data/lib/gsl/oper.rb +35 -60
  240. data/lib/gsl/version.rb +3 -0
  241. data/lib/rbgsl.rb +1 -3
  242. data/rdoc/alf.rdoc +5 -5
  243. data/rdoc/blas.rdoc +9 -9
  244. data/rdoc/bspline.rdoc +17 -17
  245. data/rdoc/changes.rdoc +4 -9
  246. data/rdoc/cheb.rdoc +25 -25
  247. data/rdoc/cholesky_complex.rdoc +21 -21
  248. data/rdoc/combi.rdoc +37 -37
  249. data/rdoc/complex.rdoc +22 -22
  250. data/rdoc/const.rdoc +47 -47
  251. data/rdoc/dht.rdoc +49 -49
  252. data/rdoc/diff.rdoc +42 -42
  253. data/rdoc/ehandling.rdoc +6 -6
  254. data/rdoc/eigen.rdoc +153 -153
  255. data/rdoc/fft.rdoc +146 -146
  256. data/rdoc/fit.rdoc +109 -109
  257. data/rdoc/function.rdoc +11 -11
  258. data/rdoc/graph.rdoc +17 -17
  259. data/rdoc/hist.rdoc +103 -103
  260. data/rdoc/hist2d.rdoc +42 -42
  261. data/rdoc/hist3d.rdoc +9 -9
  262. data/rdoc/integration.rdoc +110 -110
  263. data/rdoc/interp.rdoc +71 -71
  264. data/rdoc/intro.rdoc +8 -8
  265. data/rdoc/linalg.rdoc +188 -188
  266. data/rdoc/linalg_complex.rdoc +1 -1
  267. data/rdoc/math.rdoc +58 -58
  268. data/rdoc/matrix.rdoc +275 -275
  269. data/rdoc/min.rdoc +57 -57
  270. data/rdoc/monte.rdoc +22 -22
  271. data/rdoc/multimin.rdoc +95 -95
  272. data/rdoc/multiroot.rdoc +80 -80
  273. data/rdoc/narray.rdoc +32 -32
  274. data/rdoc/ndlinear.rdoc +54 -54
  275. data/rdoc/nonlinearfit.rdoc +100 -100
  276. data/rdoc/ntuple.rdoc +31 -31
  277. data/rdoc/odeiv.rdoc +88 -88
  278. data/rdoc/perm.rdoc +90 -90
  279. data/rdoc/poly.rdoc +66 -66
  280. data/rdoc/qrng.rdoc +21 -21
  281. data/rdoc/randist.rdoc +82 -82
  282. data/rdoc/ref.rdoc +57 -57
  283. data/rdoc/rng.rdoc +85 -85
  284. data/rdoc/roots.rdoc +57 -57
  285. data/rdoc/sf.rdoc +428 -428
  286. data/rdoc/siman.rdoc +19 -19
  287. data/rdoc/sort.rdoc +30 -30
  288. data/rdoc/start.rdoc +8 -8
  289. data/rdoc/stats.rdoc +52 -52
  290. data/rdoc/sum.rdoc +12 -12
  291. data/rdoc/tensor.rdoc +31 -31
  292. data/rdoc/tut.rdoc +1 -1
  293. data/rdoc/use.rdoc +39 -39
  294. data/rdoc/vector.rdoc +188 -188
  295. data/rdoc/vector_complex.rdoc +24 -24
  296. data/rdoc/wavelet.rdoc +46 -46
  297. data/test/gsl/blas_test.rb +79 -0
  298. data/test/gsl/bspline_test.rb +63 -0
  299. data/test/gsl/cdf_test.rb +1512 -0
  300. data/test/gsl/cheb_test.rb +80 -0
  301. data/test/gsl/combination_test.rb +100 -0
  302. data/test/gsl/complex_test.rb +20 -0
  303. data/test/gsl/const_test.rb +29 -0
  304. data/test/gsl/deriv_test.rb +62 -0
  305. data/test/gsl/dht_test.rb +79 -0
  306. data/test/gsl/diff_test.rb +53 -0
  307. data/test/gsl/eigen_test.rb +563 -0
  308. data/test/gsl/err_test.rb +23 -0
  309. data/test/gsl/fit_test.rb +101 -0
  310. data/test/gsl/histo_test.rb +14 -0
  311. data/test/gsl/index_test.rb +61 -0
  312. data/test/gsl/integration_test.rb +274 -0
  313. data/test/gsl/interp_test.rb +27 -0
  314. data/test/gsl/linalg_test.rb +463 -0
  315. data/test/gsl/matrix_nmf_test.rb +37 -0
  316. data/test/gsl/matrix_test.rb +98 -0
  317. data/test/gsl/min_test.rb +89 -0
  318. data/test/gsl/monte_test.rb +77 -0
  319. data/test/gsl/multifit_test.rb +753 -0
  320. data/test/gsl/multimin_test.rb +157 -0
  321. data/test/gsl/multiroot_test.rb +135 -0
  322. data/test/gsl/multiset_test.rb +52 -0
  323. data/test/gsl/odeiv_test.rb +275 -0
  324. data/test/gsl/oper_test.rb +98 -0
  325. data/test/gsl/poly_test.rb +338 -0
  326. data/test/gsl/qrng_test.rb +94 -0
  327. data/test/gsl/quartic_test.rb +28 -0
  328. data/test/gsl/randist_test.rb +122 -0
  329. data/test/gsl/rng_test.rb +303 -0
  330. data/test/gsl/roots_test.rb +78 -0
  331. data/test/gsl/sf_test.rb +2079 -0
  332. data/test/gsl/stats_test.rb +122 -0
  333. data/test/gsl/sum_test.rb +69 -0
  334. data/test/gsl/tensor_test.rb +396 -0
  335. data/test/gsl/vector_test.rb +223 -0
  336. data/test/gsl/wavelet_test.rb +130 -0
  337. data/test/gsl_test.rb +321 -0
  338. data/test/test_helper.rb +42 -0
  339. data/uncrustify.cfg +1693 -0
  340. metadata +337 -378
  341. data/README +0 -32
  342. data/VERSION +0 -1
  343. data/ext/bspline.c +0 -130
  344. data/ext/const.c +0 -673
  345. data/ext/cqp.c +0 -283
  346. data/ext/extconf.rb +0 -295
  347. data/ext/fcmp.c +0 -66
  348. data/ext/fresnel.c +0 -312
  349. data/ext/jacobi.c +0 -739
  350. data/ext/ool.c +0 -879
  351. data/ext/oper_complex_source.c +0 -253
  352. data/ext/sf_mathieu.c +0 -238
  353. data/include/rb_gsl_config.h +0 -62
  354. data/include/rb_gsl_dirac.h +0 -13
  355. data/rdoc/index.rdoc +0 -62
  356. data/rdoc/rngextra.rdoc +0 -11
  357. data/rdoc/screenshot.rdoc +0 -40
  358. data/setup.rb +0 -1585
  359. data/tests/blas/amax.rb +0 -14
  360. data/tests/blas/asum.rb +0 -16
  361. data/tests/blas/axpy.rb +0 -25
  362. data/tests/blas/copy.rb +0 -23
  363. data/tests/blas/dot.rb +0 -23
  364. data/tests/bspline.rb +0 -53
  365. data/tests/cdf.rb +0 -1388
  366. data/tests/cheb.rb +0 -112
  367. data/tests/combination.rb +0 -123
  368. data/tests/complex.rb +0 -17
  369. data/tests/const.rb +0 -24
  370. data/tests/deriv.rb +0 -85
  371. data/tests/dht/dht1.rb +0 -17
  372. data/tests/dht/dht2.rb +0 -23
  373. data/tests/dht/dht3.rb +0 -23
  374. data/tests/dht/dht4.rb +0 -23
  375. data/tests/diff.rb +0 -78
  376. data/tests/eigen/eigen.rb +0 -220
  377. data/tests/eigen/gen.rb +0 -105
  378. data/tests/eigen/genherm.rb +0 -66
  379. data/tests/eigen/gensymm.rb +0 -68
  380. data/tests/eigen/nonsymm.rb +0 -53
  381. data/tests/eigen/nonsymmv.rb +0 -53
  382. data/tests/eigen/symm-herm.rb +0 -74
  383. data/tests/err.rb +0 -58
  384. data/tests/fit.rb +0 -124
  385. data/tests/gsl_test.rb +0 -118
  386. data/tests/gsl_test2.rb +0 -110
  387. data/tests/histo.rb +0 -12
  388. data/tests/integration/integration1.rb +0 -72
  389. data/tests/integration/integration2.rb +0 -71
  390. data/tests/integration/integration3.rb +0 -71
  391. data/tests/integration/integration4.rb +0 -71
  392. data/tests/interp.rb +0 -45
  393. data/tests/linalg/HH.rb +0 -64
  394. data/tests/linalg/LU.rb +0 -47
  395. data/tests/linalg/QR.rb +0 -77
  396. data/tests/linalg/SV.rb +0 -24
  397. data/tests/linalg/TDN.rb +0 -116
  398. data/tests/linalg/TDS.rb +0 -122
  399. data/tests/linalg/bidiag.rb +0 -73
  400. data/tests/linalg/cholesky.rb +0 -20
  401. data/tests/linalg/linalg.rb +0 -158
  402. data/tests/matrix/matrix_complex_test.rb +0 -36
  403. data/tests/matrix/matrix_nmf_test.rb +0 -39
  404. data/tests/matrix/matrix_test.rb +0 -48
  405. data/tests/min.rb +0 -99
  406. data/tests/monte/miser.rb +0 -31
  407. data/tests/monte/vegas.rb +0 -45
  408. data/tests/multifit/test_2dgauss.rb +0 -112
  409. data/tests/multifit/test_brown.rb +0 -90
  410. data/tests/multifit/test_enso.rb +0 -246
  411. data/tests/multifit/test_filip.rb +0 -155
  412. data/tests/multifit/test_gauss.rb +0 -97
  413. data/tests/multifit/test_longley.rb +0 -110
  414. data/tests/multifit/test_multifit.rb +0 -52
  415. data/tests/multimin.rb +0 -139
  416. data/tests/multiroot.rb +0 -131
  417. data/tests/multiset.rb +0 -52
  418. data/tests/narray/blas_dnrm2.rb +0 -20
  419. data/tests/odeiv.rb +0 -353
  420. data/tests/poly/poly.rb +0 -290
  421. data/tests/poly/special.rb +0 -65
  422. data/tests/qrng.rb +0 -131
  423. data/tests/quartic.rb +0 -29
  424. data/tests/randist.rb +0 -134
  425. data/tests/rng.rb +0 -305
  426. data/tests/roots.rb +0 -76
  427. data/tests/run-test.sh +0 -17
  428. data/tests/sf/gsl_test_sf.rb +0 -249
  429. data/tests/sf/test_airy.rb +0 -83
  430. data/tests/sf/test_bessel.rb +0 -306
  431. data/tests/sf/test_coulomb.rb +0 -17
  432. data/tests/sf/test_dilog.rb +0 -25
  433. data/tests/sf/test_gamma.rb +0 -209
  434. data/tests/sf/test_hyperg.rb +0 -356
  435. data/tests/sf/test_legendre.rb +0 -227
  436. data/tests/sf/test_mathieu.rb +0 -59
  437. data/tests/sf/test_mode.rb +0 -19
  438. data/tests/sf/test_sf.rb +0 -839
  439. data/tests/stats.rb +0 -174
  440. data/tests/stats_mt.rb +0 -16
  441. data/tests/sum.rb +0 -98
  442. data/tests/sys.rb +0 -323
  443. data/tests/tensor.rb +0 -419
  444. data/tests/vector/vector_complex_test.rb +0 -101
  445. data/tests/vector/vector_test.rb +0 -141
  446. data/tests/wavelet.rb +0 -142
@@ -1,31 +0,0 @@
1
- #!/usr/bin/env ruby
2
- require("gsl")
3
- require("../gsl_test2.rb")
4
- include GSL::Test
5
-
6
- exit unless GSL::Monte::Miser.method_defined?("params_get")
7
-
8
- dim = 1
9
- miser = GSL::Monte::Miser.alloc(dim)
10
-
11
- params = miser.params_get
12
-
13
- params.estimate_frac = 99
14
- miser.params_set(params)
15
- test_abs(miser.estimate_frac, 99, 1e-5, "miser_estimate_frac")
16
-
17
- params.min_calls = 9
18
- miser.params_set(params)
19
- test_int(miser.min_calls, 9, "miser_min_calls")
20
-
21
- params.min_calls_per_bisection = 7
22
- miser.params_set(params)
23
- test_int(miser.min_calls_per_bisection, 7, "miser_min_calls_per_bisection")
24
-
25
- params.alpha = 3
26
- miser.params_set(params)
27
- test_abs(miser.alpha, 3, 1e-5, "miser_alpha")
28
-
29
- params.dither = 4
30
- miser.params_set(params)
31
- test_abs(miser.dither, 4, 1e-5, "miser_dither")
@@ -1,45 +0,0 @@
1
- #!/usr/bin/env ruby
2
- require("gsl")
3
- require("../gsl_test2.rb")
4
- include GSL::Test
5
-
6
- exit unless GSL::Monte::Vegas.method_defined?("params_get")
7
-
8
- dim = 1
9
- vegas = GSL::Monte::Vegas.alloc(dim)
10
-
11
- params = vegas.params_get
12
-
13
- params.alpha = 1
14
- vegas.params_set(params)
15
- test_abs(vegas.alpha, 1, 1e-5, "vegas_alpha")
16
-
17
- params.iterations = 4
18
- vegas.params_set(params)
19
- test_int(vegas.iterations, 4, "vegas_iterations")
20
-
21
- params.stage = 3
22
- vegas.params_set(params)
23
- test_int(vegas.stage, 3, "vegas_stage")
24
-
25
- params.mode = GSL::Monte::Vegas::MODE_IMPORTANCE
26
- vegas.params_set(params)
27
- test_int(vegas.mode, GSL::Monte::Vegas::MODE_IMPORTANCE, "vegas_mode MODE_IMPORTANCE")
28
-
29
- params.mode = GSL::Monte::Vegas::MODE_IMPORTANCE_ONLY
30
- vegas.params_set(params)
31
- test_int(vegas.mode, GSL::Monte::Vegas::MODE_IMPORTANCE_ONLY, "vegas_mode MODE_IMPORTANCE_ONLY")
32
-
33
- params.mode = GSL::Monte::Vegas::MODE_STRATIFIED
34
- vegas.params_set(params)
35
- test_int(vegas.mode, GSL::Monte::Vegas::MODE_STRATIFIED, "vegas_mode MODE_STRATIFIED")
36
-
37
- params.verbose = 0
38
- vegas.params_set(params)
39
- test_int(vegas.verbose, 0, "vegas_verbose 0")
40
- params.verbose = 1
41
- vegas.params_set(params)
42
- test_int(vegas.verbose, 1, "vegas_verbose 1")
43
- params.verbose = -1
44
- vegas.params_set(params)
45
- test_int(vegas.verbose, -1, "vegas_verbose -1")
@@ -1,112 +0,0 @@
1
- #!/usr/bin/env ruby
2
- # vim: set ts=8 sw=2 sts=2:
3
- #require("gsl")
4
- #require("../gsl_test2.rb")
5
- require("./test_multifit.rb")
6
- include GSL::Test
7
- include Math
8
-
9
- Maxiter = 10
10
- N = 33
11
-
12
- # point
13
- class Point
14
- attr_accessor :x, :y
15
- def initialize(x = nil, y = nil)
16
- @x, @y = x, y
17
- end
18
- end
19
-
20
- # model: a*exp(-((x-x0)**2+(y-y0)**2)/2/sigma**2)
21
- gauss_f = Proc.new { |x, t, y, s, f|
22
- # x: parameters as a Vecor
23
- # t: observed points as an Array
24
- # y: observed data as a GSL::Vector
25
- # s: errorbar
26
- # f: result
27
- a = x[0]
28
- x0 = x[1]
29
- y0 = x[2]
30
- sigma2 = x[3]**2
31
- y.size.times do |i|
32
- f.set(i, (a*Math::exp(-((t[i].x - x0)**2+(t[i].y - y0)**2)/2/sigma2) - y[i])/s[i])
33
- end
34
- GSL::SUCCESS
35
- }
36
-
37
- gauss_df = Proc.new { |x, t, y, s, df|
38
- a = x[0]
39
- x0 = x[1]
40
- y0 = x[2]
41
- sigma = x[3]
42
- sigma2 = sigma**2
43
- y.size.times do |i|
44
- dx = t[i].x - x0; dx2 = dx**2
45
- dy = t[i].y - y0; dy2 = dy**2
46
- f = a*Math::exp(-(dx2+dy2)/2/sigma2)
47
- df.set(i, 0, f/a/s[i])
48
- df.set(i, 1, f*dx/sigma2/s[i])
49
- df.set(i, 2, f*dy/sigma2/s[i])
50
- df.set(i, 3, f*(dx2+dy2)/sigma2/sigma/s[i])
51
- end
52
- GSL::SUCCESS
53
- }
54
-
55
- # goal
56
- xgoal = GSL::Vector.alloc([1, 0, 0, 1])
57
- parname = %w( a x0 y0 si )
58
-
59
- # data
60
- t = Array.new
61
- tmin = -10.0
62
- tmax = 10.0
63
- N.times do |j|
64
- N.times do |i|
65
- t << Point.new(tmin + (tmax - tmin)*i/(N-1), tmin + (tmax - tmin)*j/(N-1))
66
- end
67
- end
68
- stdev = xgoal[0]*0.1
69
- s = GSL::Vector.alloc(Array.new(t.size, stdev)) # error bar of each datum
70
- r = Rng.alloc
71
- e = GSL::Vector.alloc(t.size)
72
- t.size.times do |i|
73
- e[i] = -r.gaussian(stdev) # perturbation to data
74
- end
75
- y = GSL::Vector.alloc(t.size)
76
- n = GSL::Vector.alloc(Array.new(t.size, 1.0))
77
- gauss_f.call(xgoal, t, e, n, y) # data: y = model - e
78
-
79
- # fitting
80
- x = GSL::Vector.alloc([0.5, 0.1, -0.1, 2.0]) # initial guess
81
- fdf = GSL::MultiFit::Function_fdf.alloc(gauss_f, gauss_df, x.size)
82
- fdf.set_data(t, y, s)
83
-
84
- solver = GSL::MultiFit::FdfSolver.alloc(GSL::MultiFit::FdfSolver::LMSDER, t.size, x.size)
85
- solver.set(fdf, x)
86
-
87
- solver.print_state(0)
88
- Maxiter.times do |i|
89
- solver.iterate
90
- status = solver.test_delta(1e-6, 1e-6)
91
- solver.print_state(i+1)
92
- break unless GSL::CONTINUE == status
93
- end
94
-
95
- # results
96
- covar = solver.covar(0.0)
97
- xresult = solver.position
98
- dof = t.size - xresult.size
99
- chi2 = pow_2(solver.f.dnrm2)
100
- xsigma = GSL::Vector.alloc(xresult.size)
101
- xresult.size.times do |i|
102
- xsigma[i] = Math::sqrt(chi2/dof*covar[i,i]) * 2.0
103
- # allow resulting parameters to differ two times than standard error
104
- end
105
- puts "a*exp(-((x-x0)**2+(y-y0)**2)/2/si**2), chi2/N:%.3g" % (chi2/t.size)
106
- xresult.size.times do |i|
107
- test_rel(xresult[i], xgoal[i], xsigma[i], "%-2.2s" % parname[i])
108
- if (xresult[i] - xgoal[i]).abs > xsigma[i] then
109
- puts "#{'%-2.2s' % parname[i]} is #{xresult[i]} +- #{xsigma[i]}"
110
- exit 1
111
- end
112
- end
@@ -1,90 +0,0 @@
1
- #!/usr/bin/env ruby
2
- #require("gsl")
3
- #require("../gsl_test2.rb")
4
- require("./test_multifit.rb")
5
- include GSL::Test
6
- include Math
7
-
8
- Brown_N = 20;
9
- Brown_P = 4;
10
-
11
- Brown_X = GSL::Matrix.alloc([24.3485677, 4.71448798, -2.19486633, 2.69405755],
12
- [22.4116222, 3.93075538, -1.42344852, 2.5233557],
13
- [17.88886, 2.9290853, 0.125174936, -3.96823353],
14
- [17.3237176, 2.99606803, 2.03285653, 2.28992327],
15
- [17.0906508, 3.02485425, 0.296995153, 0.0876226126],
16
- [16.578006, 3.1036312, -0.18617941, 0.103262914],
17
- [15.692993, 3.33088442, 0.0706406887, 1.05923955],
18
- [14.3232177, 3.85604218, -2.3762839, -3.09486813],
19
- [14.1279266, 3.97896121, 0.446109351, 1.40023753],
20
- [13.6081961, 4.16435075, -1.51250057, -1.52510626],
21
- [13.4295245, 4.22697223, -0.196985195, 0.532009293],
22
- [13.0176117, 4.3579261, -0.353131208, 0.301377627],
23
- [12.2713535, 4.62398535, -0.00183585584, 0.894170703],
24
- [11.0316144, 5.13967727, -2.38978772, -2.89510064],
25
- [10.8807981, 5.24558004, 0.230495952, 1.27315117],
26
- [10.4029264, 5.41141257, -1.5116632, -1.47615921],
27
- [10.2574435, 5.46211045, -0.299855732, 0.451893162],
28
- [9.87863876, 5.57914292, -0.368885288, 0.358086545],
29
- [9.1894983, 5.82082741, -0.230157969, 0.621476534],
30
- [8.00589008, 6.27788753, -1.46022815, -1.33468082])
31
-
32
- Brown_F = GSL::Vector.alloc(
33
- 2474.05541,
34
- 1924.69004,
35
- 1280.63194,
36
- 1244.81867,
37
- 1190.53739,
38
- 1159.34935,
39
- 1108.44426,
40
- 1090.11073,
41
- 1015.92942,
42
- 1002.43533,
43
- 971.221084,
44
- 949.589435,
45
- 911.359899,
46
- 906.522994,
47
- 840.525729,
48
- 833.950164,
49
- 807.557511,
50
- 791.00924,
51
- 761.09598,
52
- 726.787783)
53
-
54
- Brown_cov = GSL::Matrix.alloc(
55
- [ 1.8893186910e-01, -4.7099989571e-02, 5.2154168404e-01, 1.6608168209e-02],
56
- [-4.7099989571e-02, 1.1761534388e-02, -1.2987843074e-01, -4.1615942391e-03],
57
- [ 5.2154168404e-01, -1.2987843074e-01, 1.4653936514e+00, 1.5738321686e-02],
58
- [ 1.6608168209e-02, -4.1615942391e-03, 1.5738321686e-02, 4.2348042340e-02]
59
- )
60
-
61
- Brown_x0 = GSL::Vector.alloc(25, 5, -5, -1)
62
-
63
- brown_f = Proc.new { |x, t, y, f|
64
- for i in 0...Brown_N
65
- ti = 0.2 * (i + 1);
66
- ui = x[0] + x[1] * ti - exp(ti);
67
- vi = x[2] + x[3] * sin(ti) - cos(ti);
68
- f[i] = ui*ui + vi*vi
69
- end
70
- GSL::SUCCESS
71
- }
72
-
73
- brown_df = Proc.new { |x, t, y, df|
74
- for i in 0...Brown_N
75
- ti = 0.2 * (i + 1);
76
- ui = x[0] + x[1] * ti - exp(ti);
77
- vi = x[2] + x[3] * sin(ti) - cos(ti);
78
- df.set(i, 0, 2.0*ui)
79
- df.set(i, 1, 2.0*ui*ti)
80
- df.set(i, 2, 2.0*vi)
81
- df.set(i, 3, 2.0*vi*sin(ti))
82
- end
83
- GSL::SUCCESS
84
- }
85
-
86
- fdf = GSL::MultiFit::Function_fdf.alloc(brown_f, brown_df, Brown_P)
87
-
88
- fdf.set_data(GSL::Vector.alloc(Brown_N), GSL::Vector.alloc(Brown_N))
89
-
90
- test_lmder(fdf, Brown_x0, Brown_X.vector_view, Brown_F, Brown_cov.vector_view)
@@ -1,246 +0,0 @@
1
- #!/usr/bin/env ruby
2
- #require("gsl")
3
- #require("../gsl_test2.rb")
4
- require("./test_multifit.rb")
5
- include GSL::Test
6
- include Math
7
-
8
- Enso_N = 168;
9
- Enso_P = 9;
10
-
11
- Enso_x0 = GSL::Vector.alloc(10.0, 3.0, 0.5, 44.0, -1.5, 0.5, 26.0, 0.1, 1.5)
12
-
13
- Enso_x = GSL::Vector.alloc(
14
- 1.0510749193E+01,
15
- 3.0762128085E+00,
16
- 5.3280138227E-01,
17
- 4.4311088700E+01,
18
- -1.6231428586E+00,
19
- 5.2554493756E-01,
20
- 2.6887614440E+01,
21
- 2.1232288488E-01,
22
- 1.4966870418E+00)
23
-
24
- Enso_sumsq = 7.8853978668E+02
25
-
26
- Enso_sigma = GSL::Vector.alloc(
27
- 1.7488832467E-01,
28
- 2.4310052139E-01,
29
- 2.4354686618E-01,
30
- 9.4408025976E-01,
31
- 2.8078369611E-01,
32
- 4.8073701119E-01,
33
- 4.1612939130E-01,
34
- 5.1460022911E-01,
35
- 2.5434468893E-01)
36
-
37
- Enso_F = GSL::Vector.alloc(
38
- 12.90000,
39
- 11.30000,
40
- 10.60000,
41
- 11.20000,
42
- 10.90000,
43
- 7.500000,
44
- 7.700000,
45
- 11.70000,
46
- 12.90000,
47
- 14.30000,
48
- 10.90000,
49
- 13.70000,
50
- 17.10000,
51
- 14.00000,
52
- 15.30000,
53
- 8.500000,
54
- 5.700000,
55
- 5.500000,
56
- 7.600000,
57
- 8.600000,
58
- 7.300000,
59
- 7.600000,
60
- 12.70000,
61
- 11.00000,
62
- 12.70000,
63
- 12.90000,
64
- 13.00000,
65
- 10.90000,
66
- 10.400000,
67
- 10.200000,
68
- 8.000000,
69
- 10.90000,
70
- 13.60000,
71
- 10.500000,
72
- 9.200000,
73
- 12.40000,
74
- 12.70000,
75
- 13.30000,
76
- 10.100000,
77
- 7.800000,
78
- 4.800000,
79
- 3.000000,
80
- 2.500000,
81
- 6.300000,
82
- 9.700000,
83
- 11.60000,
84
- 8.600000,
85
- 12.40000,
86
- 10.500000,
87
- 13.30000,
88
- 10.400000,
89
- 8.100000,
90
- 3.700000,
91
- 10.70000,
92
- 5.100000,
93
- 10.400000,
94
- 10.90000,
95
- 11.70000,
96
- 11.40000,
97
- 13.70000,
98
- 14.10000,
99
- 14.00000,
100
- 12.50000,
101
- 6.300000,
102
- 9.600000,
103
- 11.70000,
104
- 5.000000,
105
- 10.80000,
106
- 12.70000,
107
- 10.80000,
108
- 11.80000,
109
- 12.60000,
110
- 15.70000,
111
- 12.60000,
112
- 14.80000,
113
- 7.800000,
114
- 7.100000,
115
- 11.20000,
116
- 8.100000,
117
- 6.400000,
118
- 5.200000,
119
- 12.00000,
120
- 10.200000,
121
- 12.70000,
122
- 10.200000,
123
- 14.70000,
124
- 12.20000,
125
- 7.100000,
126
- 5.700000,
127
- 6.700000,
128
- 3.900000,
129
- 8.500000,
130
- 8.300000,
131
- 10.80000,
132
- 16.70000,
133
- 12.60000,
134
- 12.50000,
135
- 12.50000,
136
- 9.800000,
137
- 7.200000,
138
- 4.100000,
139
- 10.60000,
140
- 10.100000,
141
- 10.100000,
142
- 11.90000,
143
- 13.60000,
144
- 16.30000,
145
- 17.60000,
146
- 15.50000,
147
- 16.00000,
148
- 15.20000,
149
- 11.20000,
150
- 14.30000,
151
- 14.50000,
152
- 8.500000,
153
- 12.00000,
154
- 12.70000,
155
- 11.30000,
156
- 14.50000,
157
- 15.10000,
158
- 10.400000,
159
- 11.50000,
160
- 13.40000,
161
- 7.500000,
162
- 0.6000000,
163
- 0.3000000,
164
- 5.500000,
165
- 5.000000,
166
- 4.600000,
167
- 8.200000,
168
- 9.900000,
169
- 9.200000,
170
- 12.50000,
171
- 10.90000,
172
- 9.900000,
173
- 8.900000,
174
- 7.600000,
175
- 9.500000,
176
- 8.400000,
177
- 10.70000,
178
- 13.60000,
179
- 13.70000,
180
- 13.70000,
181
- 16.50000,
182
- 16.80000,
183
- 17.10000,
184
- 15.40000,
185
- 9.500000,
186
- 6.100000,
187
- 10.100000,
188
- 9.300000,
189
- 5.300000,
190
- 11.20000,
191
- 16.60000,
192
- 15.60000,
193
- 12.00000,
194
- 11.50000,
195
- 8.600000,
196
- 13.80000,
197
- 8.700000,
198
- 8.600000,
199
- 8.600000,
200
- 8.700000,
201
- 12.80000,
202
- 13.20000,
203
- 14.00000,
204
- 13.40000,
205
- 14.80000)
206
-
207
-
208
- enso_f = Proc.new { |x, t, y, f|
209
- b = x
210
- for i in 0...Enso_N
211
- ti = t[i]
212
- yy = b[0]
213
- yy += b[1]*cos(2.0*M_PI*ti/12)
214
- yy += b[2]*sin(2.0*M_PI*ti/12)
215
- yy += b[4]*cos(2.0*M_PI*ti/b[3])
216
- yy += b[5]*sin(2.0*M_PI*ti/b[3])
217
- yy += b[7]*cos(2.0*M_PI*ti/b[6])
218
- yy += b[8]*sin(2.0*M_PI*ti/b[6])
219
- f[i] = y[i] - yy
220
- end
221
- GSL::SUCCESS
222
- }
223
-
224
- enso_df = Proc.new { |x, t, y, df|
225
- b = x
226
- for i in 0...Enso_N
227
- ti = t[i]
228
- df.set(i, 0, -1.0)
229
- df.set(i, 1, -cos(2.0*M_PI*ti/12))
230
- df.set(i, 2, -sin(2.0*M_PI*ti/12))
231
- df.set(i, 3, -b[4]*(2.0*M_PI*ti/(b[3]*b[3]))*sin(2*M_PI*ti/b[3])+ b[5]*(2*M_PI*ti/(b[3]*b[3]))*cos(2*M_PI*ti/b[3]))
232
- df.set(i, 4, -cos(2*M_PI*ti/b[3]));
233
- df.set(i, 5, -sin(2*M_PI*ti/b[3]));
234
- df.set(i, 6, - b[7] * (2*M_PI*ti/(b[6]*b[6])) * sin(2*M_PI*ti/b[6]) + b[8] * (2*M_PI*ti/(b[6]*b[6])) * cos(2*M_PI*ti/b[6]))
235
- df.set(i, 7, -cos(2*M_PI*ti/b[6]));
236
- df.set(i, 8, -sin(2*M_PI*ti/b[6]));
237
- end
238
- GSL::SUCCESS
239
- }
240
-
241
- fdf = GSL::MultiFit::Function_fdf.alloc(enso_f, enso_df, Enso_P)
242
-
243
- #fdf.set_data(GSL::Vector.alloc(1..168), Enso_F)
244
- fdf.set_data(GSL::Vector.indgen(168, 1), Enso_F)
245
-
246
- test_fdf("nist-ENSO", fdf, Enso_x0, Enso_x, Enso_sumsq, Enso_sigma)