gsl 1.15.3 → 1.16.0.6

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Files changed (446) hide show
  1. checksums.yaml +7 -0
  2. data/.gitignore +12 -0
  3. data/.travis.yml +24 -0
  4. data/AUTHORS +10 -2
  5. data/COPYING +341 -339
  6. data/ChangeLog +612 -554
  7. data/Gemfile +4 -0
  8. data/README.md +77 -0
  9. data/Rakefile +14 -93
  10. data/THANKS +1 -1
  11. data/examples/blas/blas.rb +1 -1
  12. data/examples/bspline.rb +3 -3
  13. data/examples/complex/functions.rb +4 -4
  14. data/examples/complex/mul.rb +1 -1
  15. data/examples/const/physconst.rb +4 -4
  16. data/examples/const/travel.rb +4 -4
  17. data/examples/eigen/nonsymmv.rb +1 -1
  18. data/examples/eigen/qhoscillator.rb +3 -3
  19. data/examples/fft/radix2.rb +1 -1
  20. data/examples/fft/real-halfcomplex.rb +3 -3
  21. data/examples/fft/real-halfcomplex2.rb +3 -3
  22. data/examples/fit/expfit.rb +1 -1
  23. data/examples/fit/multifit.rb +1 -1
  24. data/examples/fit/ndlinear.rb +44 -44
  25. data/examples/fit/nonlinearfit.rb +1 -1
  26. data/examples/fit/wlinear.rb +3 -3
  27. data/examples/function/function.rb +1 -1
  28. data/examples/function/min.rb +1 -1
  29. data/examples/function/synchrotron.rb +2 -2
  30. data/examples/gallery/koch.rb +1 -1
  31. data/examples/histogram/cauchy.rb +2 -2
  32. data/examples/histogram/exponential.rb +1 -1
  33. data/examples/histogram/histo3d.rb +1 -1
  34. data/examples/histogram/histogram-pdf.rb +2 -2
  35. data/examples/histogram/xexp.rb +1 -1
  36. data/examples/integration/ahmed.rb +2 -2
  37. data/examples/integration/cosmology.rb +7 -7
  38. data/examples/integration/friedmann.rb +4 -4
  39. data/examples/integration/qng.rb +1 -1
  40. data/examples/interp/demo.rb +2 -2
  41. data/examples/linalg/LQ_solve.rb +1 -1
  42. data/examples/linalg/LU.rb +1 -1
  43. data/examples/linalg/LU2.rb +1 -1
  44. data/examples/linalg/LU_narray.rb +1 -1
  45. data/examples/linalg/PTLQ.rb +1 -1
  46. data/examples/linalg/QRPT.rb +1 -1
  47. data/examples/linalg/chol.rb +1 -1
  48. data/examples/linalg/chol_narray.rb +1 -1
  49. data/examples/linalg/complex.rb +1 -1
  50. data/examples/math/elementary.rb +1 -1
  51. data/examples/math/functions.rb +1 -1
  52. data/examples/math/inf_nan.rb +1 -1
  53. data/examples/math/minmax.rb +1 -1
  54. data/examples/math/power.rb +1 -1
  55. data/examples/math/test.rb +1 -1
  56. data/examples/min.rb +1 -1
  57. data/examples/multimin/bundle.rb +1 -1
  58. data/examples/multimin/cqp.rb +17 -17
  59. data/examples/multiroot/fsolver3.rb +1 -1
  60. data/examples/odeiv/binarysystem.rb +12 -12
  61. data/examples/odeiv/demo.rb +3 -3
  62. data/examples/odeiv/frei1.rb +7 -7
  63. data/examples/odeiv/frei2.rb +4 -4
  64. data/examples/odeiv/oscillator.rb +1 -1
  65. data/examples/odeiv/sedov.rb +3 -3
  66. data/examples/odeiv/whitedwarf.rb +11 -11
  67. data/examples/permutation/ex1.rb +2 -2
  68. data/examples/permutation/permutation.rb +1 -1
  69. data/examples/poly/demo.rb +1 -1
  70. data/examples/random/diffusion.rb +1 -1
  71. data/examples/random/generator.rb +2 -2
  72. data/examples/random/randomwalk.rb +3 -3
  73. data/examples/random/rng.rb +1 -1
  74. data/examples/roots/bisection.rb +1 -1
  75. data/examples/roots/brent.rb +1 -1
  76. data/examples/roots/demo.rb +1 -1
  77. data/examples/roots/newton.rb +2 -2
  78. data/examples/roots/recombination.gp +0 -1
  79. data/examples/sf/hyperg.rb +1 -1
  80. data/examples/sf/sphbessel.rb +1 -1
  81. data/examples/sort/sort.rb +1 -1
  82. data/examples/tamu_anova.rb +4 -4
  83. data/examples/vector/add.rb +1 -1
  84. data/examples/vector/decimate.rb +1 -1
  85. data/examples/vector/gnuplot.rb +8 -8
  86. data/examples/vector/vector.rb +2 -2
  87. data/examples/wavelet/wavelet1.rb +1 -1
  88. data/ext/{alf.c → gsl_native/alf.c} +10 -10
  89. data/ext/{array.c → gsl_native/array.c} +70 -159
  90. data/ext/{array_complex.c → gsl_native/array_complex.c} +63 -66
  91. data/ext/{blas.c → gsl_native/blas.c} +2 -3
  92. data/ext/{blas1.c → gsl_native/blas1.c} +35 -36
  93. data/ext/{blas2.c → gsl_native/blas2.c} +57 -62
  94. data/ext/{blas3.c → gsl_native/blas3.c} +57 -58
  95. data/ext/{block.c → gsl_native/block.c} +14 -18
  96. data/ext/{block_source.c → gsl_native/block_source.h} +110 -112
  97. data/ext/gsl_native/bspline.c +122 -0
  98. data/ext/{bundle.c → gsl_native/bundle.c} +0 -0
  99. data/ext/{cdf.c → gsl_native/cdf.c} +79 -93
  100. data/ext/{cheb.c → gsl_native/cheb.c} +78 -89
  101. data/ext/{combination.c → gsl_native/combination.c} +11 -19
  102. data/ext/{common.c → gsl_native/common.c} +9 -41
  103. data/ext/{complex.c → gsl_native/complex.c} +116 -118
  104. data/ext/gsl_native/const.c +331 -0
  105. data/ext/{const_additional.c → gsl_native/const_additional.c} +13 -34
  106. data/ext/gsl_native/cqp.c +283 -0
  107. data/ext/{deriv.c → gsl_native/deriv.c} +25 -33
  108. data/ext/{dht.c → gsl_native/dht.c} +23 -31
  109. data/ext/{diff.c → gsl_native/diff.c} +26 -28
  110. data/ext/{dirac.c → gsl_native/dirac.c} +45 -46
  111. data/ext/{eigen.c → gsl_native/eigen.c} +1044 -1095
  112. data/ext/{error.c → gsl_native/error.c} +18 -18
  113. data/ext/gsl_native/extconf.rb +118 -0
  114. data/ext/{fft.c → gsl_native/fft.c} +197 -204
  115. data/ext/{fit.c → gsl_native/fit.c} +17 -18
  116. data/ext/gsl_native/fresnel.c +312 -0
  117. data/ext/{function.c → gsl_native/function.c} +37 -43
  118. data/ext/{geometry.c → gsl_native/geometry.c} +16 -16
  119. data/ext/{graph.c → gsl_native/graph.c} +39 -89
  120. data/ext/{gsl.c → gsl_native/gsl.c} +12 -33
  121. data/ext/{gsl_narray.c → gsl_native/gsl_narray.c} +20 -30
  122. data/ext/{histogram.c → gsl_native/histogram.c} +133 -160
  123. data/ext/{histogram2d.c → gsl_native/histogram2d.c} +78 -104
  124. data/ext/{histogram3d.c → gsl_native/histogram3d.c} +76 -76
  125. data/ext/{histogram3d_source.c → gsl_native/histogram3d_source.c} +196 -197
  126. data/ext/{histogram_find.c → gsl_native/histogram_find.c} +32 -34
  127. data/ext/{histogram_oper.c → gsl_native/histogram_oper.c} +43 -52
  128. data/ext/{ieee.c → gsl_native/ieee.c} +9 -21
  129. data/{include → ext/gsl_native/include}/rb_gsl.h +4 -26
  130. data/{include → ext/gsl_native/include}/rb_gsl_array.h +15 -39
  131. data/{include → ext/gsl_native/include}/rb_gsl_cheb.h +0 -2
  132. data/{include → ext/gsl_native/include}/rb_gsl_common.h +61 -61
  133. data/{include → ext/gsl_native/include}/rb_gsl_complex.h +1 -1
  134. data/{include → ext/gsl_native/include}/rb_gsl_const.h +0 -6
  135. data/ext/gsl_native/include/rb_gsl_dirac.h +6 -0
  136. data/{include → ext/gsl_native/include}/rb_gsl_eigen.h +1 -1
  137. data/{include → ext/gsl_native/include}/rb_gsl_fft.h +0 -13
  138. data/{include → ext/gsl_native/include}/rb_gsl_fit.h +0 -2
  139. data/{include → ext/gsl_native/include}/rb_gsl_function.h +0 -4
  140. data/{include → ext/gsl_native/include}/rb_gsl_graph.h +2 -4
  141. data/{include → ext/gsl_native/include}/rb_gsl_histogram.h +8 -8
  142. data/{include → ext/gsl_native/include}/rb_gsl_histogram3d.h +50 -50
  143. data/{include → ext/gsl_native/include}/rb_gsl_integration.h +1 -1
  144. data/{include → ext/gsl_native/include}/rb_gsl_interp.h +0 -5
  145. data/{include → ext/gsl_native/include}/rb_gsl_linalg.h +2 -6
  146. data/{include → ext/gsl_native/include}/rb_gsl_math.h +0 -6
  147. data/{include → ext/gsl_native/include}/rb_gsl_odeiv.h +0 -3
  148. data/{include → ext/gsl_native/include}/rb_gsl_poly.h +3 -7
  149. data/{include → ext/gsl_native/include}/rb_gsl_rational.h +1 -8
  150. data/{include → ext/gsl_native/include}/rb_gsl_rng.h +0 -1
  151. data/{include → ext/gsl_native/include}/rb_gsl_root.h +1 -1
  152. data/{include → ext/gsl_native/include}/rb_gsl_sf.h +39 -48
  153. data/{include → ext/gsl_native/include}/rb_gsl_statistics.h +1 -1
  154. data/{include → ext/gsl_native/include}/rb_gsl_tensor.h +0 -2
  155. data/{include → ext/gsl_native/include}/rb_gsl_with_narray.h +3 -1
  156. data/{include → ext/gsl_native/include}/templates_off.h +0 -0
  157. data/{include → ext/gsl_native/include}/templates_on.h +1 -1
  158. data/ext/{integration.c → gsl_native/integration.c} +164 -189
  159. data/ext/{interp.c → gsl_native/interp.c} +25 -38
  160. data/ext/gsl_native/jacobi.c +733 -0
  161. data/ext/{linalg.c → gsl_native/linalg.c} +462 -589
  162. data/ext/{linalg_complex.c → gsl_native/linalg_complex.c} +93 -106
  163. data/ext/{math.c → gsl_native/math.c} +48 -67
  164. data/ext/{matrix.c → gsl_native/matrix.c} +13 -16
  165. data/ext/{matrix_complex.c → gsl_native/matrix_complex.c} +119 -123
  166. data/ext/{matrix_double.c → gsl_native/matrix_double.c} +79 -82
  167. data/ext/{matrix_int.c → gsl_native/matrix_int.c} +53 -54
  168. data/ext/{matrix_source.c → gsl_native/matrix_source.h} +292 -318
  169. data/ext/{min.c → gsl_native/min.c} +45 -76
  170. data/ext/{monte.c → gsl_native/monte.c} +50 -64
  171. data/ext/{multifit.c → gsl_native/multifit.c} +142 -151
  172. data/ext/{multimin.c → gsl_native/multimin.c} +64 -92
  173. data/ext/{multimin_fsdf.c → gsl_native/multimin_fsdf.c} +16 -16
  174. data/ext/{multiroots.c → gsl_native/multiroots.c} +73 -76
  175. data/ext/{multiset.c → gsl_native/multiset.c} +4 -8
  176. data/ext/{ndlinear.c → gsl_native/ndlinear.c} +320 -321
  177. data/ext/{nmf.c → gsl_native/nmf.c} +11 -11
  178. data/ext/{nmf_wrap.c → gsl_native/nmf_wrap.c} +1 -1
  179. data/ext/{ntuple.c → gsl_native/ntuple.c} +23 -23
  180. data/ext/{odeiv.c → gsl_native/odeiv.c} +101 -116
  181. data/ext/gsl_native/ool.c +879 -0
  182. data/ext/{permutation.c → gsl_native/permutation.c} +39 -37
  183. data/ext/{poly.c → gsl_native/poly.c} +10 -13
  184. data/ext/{poly2.c → gsl_native/poly2.c} +16 -16
  185. data/ext/{poly_source.c → gsl_native/poly_source.h} +249 -293
  186. data/ext/{qrng.c → gsl_native/qrng.c} +9 -20
  187. data/ext/{randist.c → gsl_native/randist.c} +222 -247
  188. data/ext/{rational.c → gsl_native/rational.c} +12 -12
  189. data/ext/{rng.c → gsl_native/rng.c} +30 -47
  190. data/ext/{root.c → gsl_native/root.c} +47 -48
  191. data/ext/{sf.c → gsl_native/sf.c} +196 -244
  192. data/ext/{sf_airy.c → gsl_native/sf_airy.c} +2 -2
  193. data/ext/{sf_bessel.c → gsl_native/sf_bessel.c} +7 -7
  194. data/ext/{sf_clausen.c → gsl_native/sf_clausen.c} +1 -1
  195. data/ext/{sf_coulomb.c → gsl_native/sf_coulomb.c} +40 -40
  196. data/ext/{sf_coupling.c → gsl_native/sf_coupling.c} +30 -30
  197. data/ext/{sf_dawson.c → gsl_native/sf_dawson.c} +1 -1
  198. data/ext/{sf_debye.c → gsl_native/sf_debye.c} +1 -10
  199. data/ext/{sf_dilog.c → gsl_native/sf_dilog.c} +1 -1
  200. data/ext/{sf_elementary.c → gsl_native/sf_elementary.c} +3 -3
  201. data/ext/{sf_ellint.c → gsl_native/sf_ellint.c} +43 -43
  202. data/ext/{sf_elljac.c → gsl_native/sf_elljac.c} +3 -3
  203. data/ext/{sf_erfc.c → gsl_native/sf_erfc.c} +1 -5
  204. data/ext/{sf_exp.c → gsl_native/sf_exp.c} +3 -3
  205. data/ext/{sf_expint.c → gsl_native/sf_expint.c} +2 -12
  206. data/ext/{sf_fermi_dirac.c → gsl_native/sf_fermi_dirac.c} +1 -1
  207. data/ext/{sf_gamma.c → gsl_native/sf_gamma.c} +2 -6
  208. data/ext/{sf_gegenbauer.c → gsl_native/sf_gegenbauer.c} +1 -1
  209. data/ext/{sf_hyperg.c → gsl_native/sf_hyperg.c} +1 -1
  210. data/ext/{sf_laguerre.c → gsl_native/sf_laguerre.c} +4 -4
  211. data/ext/{sf_lambert.c → gsl_native/sf_lambert.c} +1 -1
  212. data/ext/{sf_legendre.c → gsl_native/sf_legendre.c} +1 -1
  213. data/ext/{sf_log.c → gsl_native/sf_log.c} +4 -4
  214. data/ext/gsl_native/sf_mathieu.c +235 -0
  215. data/ext/{sf_power.c → gsl_native/sf_power.c} +1 -1
  216. data/ext/{sf_psi.c → gsl_native/sf_psi.c} +3 -12
  217. data/ext/{sf_synchrotron.c → gsl_native/sf_synchrotron.c} +1 -1
  218. data/ext/{sf_transport.c → gsl_native/sf_transport.c} +1 -1
  219. data/ext/{sf_trigonometric.c → gsl_native/sf_trigonometric.c} +4 -4
  220. data/ext/{sf_zeta.c → gsl_native/sf_zeta.c} +1 -5
  221. data/ext/{signal.c → gsl_native/signal.c} +63 -68
  222. data/ext/{siman.c → gsl_native/siman.c} +45 -49
  223. data/ext/{sort.c → gsl_native/sort.c} +6 -7
  224. data/ext/{spline.c → gsl_native/spline.c} +28 -46
  225. data/ext/{stats.c → gsl_native/stats.c} +105 -118
  226. data/ext/{sum.c → gsl_native/sum.c} +34 -34
  227. data/ext/{tamu_anova.c → gsl_native/tamu_anova.c} +1 -1
  228. data/ext/{tensor.c → gsl_native/tensor.c} +8 -11
  229. data/ext/{tensor_source.c → gsl_native/tensor_source.h} +147 -148
  230. data/ext/{vector.c → gsl_native/vector.c} +11 -14
  231. data/ext/{vector_complex.c → gsl_native/vector_complex.c} +179 -184
  232. data/ext/{vector_double.c → gsl_native/vector_double.c} +178 -183
  233. data/ext/{vector_int.c → gsl_native/vector_int.c} +27 -29
  234. data/ext/{vector_source.c → gsl_native/vector_source.h} +428 -443
  235. data/ext/{wavelet.c → gsl_native/wavelet.c} +224 -246
  236. data/gsl.gemspec +29 -0
  237. data/lib/gsl.rb +8 -3
  238. data/lib/gsl/gnuplot.rb +3 -3
  239. data/lib/gsl/oper.rb +35 -60
  240. data/lib/gsl/version.rb +3 -0
  241. data/lib/rbgsl.rb +1 -3
  242. data/rdoc/alf.rdoc +5 -5
  243. data/rdoc/blas.rdoc +9 -9
  244. data/rdoc/bspline.rdoc +17 -17
  245. data/rdoc/changes.rdoc +4 -9
  246. data/rdoc/cheb.rdoc +25 -25
  247. data/rdoc/cholesky_complex.rdoc +21 -21
  248. data/rdoc/combi.rdoc +37 -37
  249. data/rdoc/complex.rdoc +22 -22
  250. data/rdoc/const.rdoc +47 -47
  251. data/rdoc/dht.rdoc +49 -49
  252. data/rdoc/diff.rdoc +42 -42
  253. data/rdoc/ehandling.rdoc +6 -6
  254. data/rdoc/eigen.rdoc +153 -153
  255. data/rdoc/fft.rdoc +146 -146
  256. data/rdoc/fit.rdoc +109 -109
  257. data/rdoc/function.rdoc +11 -11
  258. data/rdoc/graph.rdoc +17 -17
  259. data/rdoc/hist.rdoc +103 -103
  260. data/rdoc/hist2d.rdoc +42 -42
  261. data/rdoc/hist3d.rdoc +9 -9
  262. data/rdoc/integration.rdoc +110 -110
  263. data/rdoc/interp.rdoc +71 -71
  264. data/rdoc/intro.rdoc +8 -8
  265. data/rdoc/linalg.rdoc +188 -188
  266. data/rdoc/linalg_complex.rdoc +1 -1
  267. data/rdoc/math.rdoc +58 -58
  268. data/rdoc/matrix.rdoc +275 -275
  269. data/rdoc/min.rdoc +57 -57
  270. data/rdoc/monte.rdoc +22 -22
  271. data/rdoc/multimin.rdoc +95 -95
  272. data/rdoc/multiroot.rdoc +80 -80
  273. data/rdoc/narray.rdoc +32 -32
  274. data/rdoc/ndlinear.rdoc +54 -54
  275. data/rdoc/nonlinearfit.rdoc +100 -100
  276. data/rdoc/ntuple.rdoc +31 -31
  277. data/rdoc/odeiv.rdoc +88 -88
  278. data/rdoc/perm.rdoc +90 -90
  279. data/rdoc/poly.rdoc +66 -66
  280. data/rdoc/qrng.rdoc +21 -21
  281. data/rdoc/randist.rdoc +82 -82
  282. data/rdoc/ref.rdoc +57 -57
  283. data/rdoc/rng.rdoc +85 -85
  284. data/rdoc/roots.rdoc +57 -57
  285. data/rdoc/sf.rdoc +428 -428
  286. data/rdoc/siman.rdoc +19 -19
  287. data/rdoc/sort.rdoc +30 -30
  288. data/rdoc/start.rdoc +8 -8
  289. data/rdoc/stats.rdoc +52 -52
  290. data/rdoc/sum.rdoc +12 -12
  291. data/rdoc/tensor.rdoc +31 -31
  292. data/rdoc/tut.rdoc +1 -1
  293. data/rdoc/use.rdoc +39 -39
  294. data/rdoc/vector.rdoc +188 -188
  295. data/rdoc/vector_complex.rdoc +24 -24
  296. data/rdoc/wavelet.rdoc +46 -46
  297. data/test/gsl/blas_test.rb +79 -0
  298. data/test/gsl/bspline_test.rb +63 -0
  299. data/test/gsl/cdf_test.rb +1512 -0
  300. data/test/gsl/cheb_test.rb +80 -0
  301. data/test/gsl/combination_test.rb +100 -0
  302. data/test/gsl/complex_test.rb +20 -0
  303. data/test/gsl/const_test.rb +29 -0
  304. data/test/gsl/deriv_test.rb +62 -0
  305. data/test/gsl/dht_test.rb +79 -0
  306. data/test/gsl/diff_test.rb +53 -0
  307. data/test/gsl/eigen_test.rb +563 -0
  308. data/test/gsl/err_test.rb +23 -0
  309. data/test/gsl/fit_test.rb +101 -0
  310. data/test/gsl/histo_test.rb +14 -0
  311. data/test/gsl/index_test.rb +61 -0
  312. data/test/gsl/integration_test.rb +274 -0
  313. data/test/gsl/interp_test.rb +27 -0
  314. data/test/gsl/linalg_test.rb +463 -0
  315. data/test/gsl/matrix_nmf_test.rb +37 -0
  316. data/test/gsl/matrix_test.rb +98 -0
  317. data/test/gsl/min_test.rb +89 -0
  318. data/test/gsl/monte_test.rb +77 -0
  319. data/test/gsl/multifit_test.rb +753 -0
  320. data/test/gsl/multimin_test.rb +157 -0
  321. data/test/gsl/multiroot_test.rb +135 -0
  322. data/test/gsl/multiset_test.rb +52 -0
  323. data/test/gsl/odeiv_test.rb +275 -0
  324. data/test/gsl/oper_test.rb +98 -0
  325. data/test/gsl/poly_test.rb +338 -0
  326. data/test/gsl/qrng_test.rb +94 -0
  327. data/test/gsl/quartic_test.rb +28 -0
  328. data/test/gsl/randist_test.rb +122 -0
  329. data/test/gsl/rng_test.rb +303 -0
  330. data/test/gsl/roots_test.rb +78 -0
  331. data/test/gsl/sf_test.rb +2079 -0
  332. data/test/gsl/stats_test.rb +122 -0
  333. data/test/gsl/sum_test.rb +69 -0
  334. data/test/gsl/tensor_test.rb +396 -0
  335. data/test/gsl/vector_test.rb +223 -0
  336. data/test/gsl/wavelet_test.rb +130 -0
  337. data/test/gsl_test.rb +321 -0
  338. data/test/test_helper.rb +42 -0
  339. data/uncrustify.cfg +1693 -0
  340. metadata +337 -378
  341. data/README +0 -32
  342. data/VERSION +0 -1
  343. data/ext/bspline.c +0 -130
  344. data/ext/const.c +0 -673
  345. data/ext/cqp.c +0 -283
  346. data/ext/extconf.rb +0 -295
  347. data/ext/fcmp.c +0 -66
  348. data/ext/fresnel.c +0 -312
  349. data/ext/jacobi.c +0 -739
  350. data/ext/ool.c +0 -879
  351. data/ext/oper_complex_source.c +0 -253
  352. data/ext/sf_mathieu.c +0 -238
  353. data/include/rb_gsl_config.h +0 -62
  354. data/include/rb_gsl_dirac.h +0 -13
  355. data/rdoc/index.rdoc +0 -62
  356. data/rdoc/rngextra.rdoc +0 -11
  357. data/rdoc/screenshot.rdoc +0 -40
  358. data/setup.rb +0 -1585
  359. data/tests/blas/amax.rb +0 -14
  360. data/tests/blas/asum.rb +0 -16
  361. data/tests/blas/axpy.rb +0 -25
  362. data/tests/blas/copy.rb +0 -23
  363. data/tests/blas/dot.rb +0 -23
  364. data/tests/bspline.rb +0 -53
  365. data/tests/cdf.rb +0 -1388
  366. data/tests/cheb.rb +0 -112
  367. data/tests/combination.rb +0 -123
  368. data/tests/complex.rb +0 -17
  369. data/tests/const.rb +0 -24
  370. data/tests/deriv.rb +0 -85
  371. data/tests/dht/dht1.rb +0 -17
  372. data/tests/dht/dht2.rb +0 -23
  373. data/tests/dht/dht3.rb +0 -23
  374. data/tests/dht/dht4.rb +0 -23
  375. data/tests/diff.rb +0 -78
  376. data/tests/eigen/eigen.rb +0 -220
  377. data/tests/eigen/gen.rb +0 -105
  378. data/tests/eigen/genherm.rb +0 -66
  379. data/tests/eigen/gensymm.rb +0 -68
  380. data/tests/eigen/nonsymm.rb +0 -53
  381. data/tests/eigen/nonsymmv.rb +0 -53
  382. data/tests/eigen/symm-herm.rb +0 -74
  383. data/tests/err.rb +0 -58
  384. data/tests/fit.rb +0 -124
  385. data/tests/gsl_test.rb +0 -118
  386. data/tests/gsl_test2.rb +0 -110
  387. data/tests/histo.rb +0 -12
  388. data/tests/integration/integration1.rb +0 -72
  389. data/tests/integration/integration2.rb +0 -71
  390. data/tests/integration/integration3.rb +0 -71
  391. data/tests/integration/integration4.rb +0 -71
  392. data/tests/interp.rb +0 -45
  393. data/tests/linalg/HH.rb +0 -64
  394. data/tests/linalg/LU.rb +0 -47
  395. data/tests/linalg/QR.rb +0 -77
  396. data/tests/linalg/SV.rb +0 -24
  397. data/tests/linalg/TDN.rb +0 -116
  398. data/tests/linalg/TDS.rb +0 -122
  399. data/tests/linalg/bidiag.rb +0 -73
  400. data/tests/linalg/cholesky.rb +0 -20
  401. data/tests/linalg/linalg.rb +0 -158
  402. data/tests/matrix/matrix_complex_test.rb +0 -36
  403. data/tests/matrix/matrix_nmf_test.rb +0 -39
  404. data/tests/matrix/matrix_test.rb +0 -48
  405. data/tests/min.rb +0 -99
  406. data/tests/monte/miser.rb +0 -31
  407. data/tests/monte/vegas.rb +0 -45
  408. data/tests/multifit/test_2dgauss.rb +0 -112
  409. data/tests/multifit/test_brown.rb +0 -90
  410. data/tests/multifit/test_enso.rb +0 -246
  411. data/tests/multifit/test_filip.rb +0 -155
  412. data/tests/multifit/test_gauss.rb +0 -97
  413. data/tests/multifit/test_longley.rb +0 -110
  414. data/tests/multifit/test_multifit.rb +0 -52
  415. data/tests/multimin.rb +0 -139
  416. data/tests/multiroot.rb +0 -131
  417. data/tests/multiset.rb +0 -52
  418. data/tests/narray/blas_dnrm2.rb +0 -20
  419. data/tests/odeiv.rb +0 -353
  420. data/tests/poly/poly.rb +0 -290
  421. data/tests/poly/special.rb +0 -65
  422. data/tests/qrng.rb +0 -131
  423. data/tests/quartic.rb +0 -29
  424. data/tests/randist.rb +0 -134
  425. data/tests/rng.rb +0 -305
  426. data/tests/roots.rb +0 -76
  427. data/tests/run-test.sh +0 -17
  428. data/tests/sf/gsl_test_sf.rb +0 -249
  429. data/tests/sf/test_airy.rb +0 -83
  430. data/tests/sf/test_bessel.rb +0 -306
  431. data/tests/sf/test_coulomb.rb +0 -17
  432. data/tests/sf/test_dilog.rb +0 -25
  433. data/tests/sf/test_gamma.rb +0 -209
  434. data/tests/sf/test_hyperg.rb +0 -356
  435. data/tests/sf/test_legendre.rb +0 -227
  436. data/tests/sf/test_mathieu.rb +0 -59
  437. data/tests/sf/test_mode.rb +0 -19
  438. data/tests/sf/test_sf.rb +0 -839
  439. data/tests/stats.rb +0 -174
  440. data/tests/stats_mt.rb +0 -16
  441. data/tests/sum.rb +0 -98
  442. data/tests/sys.rb +0 -323
  443. data/tests/tensor.rb +0 -419
  444. data/tests/vector/vector_complex_test.rb +0 -101
  445. data/tests/vector/vector_test.rb +0 -141
  446. data/tests/wavelet.rb +0 -142
@@ -0,0 +1,28 @@
1
+ require 'test_helper'
2
+
3
+ class QuarticTest < GSL::TestCase
4
+
5
+ def _test_quartic(n, *sol)
6
+ z = GSL::Poly.complex_solve_quartic(0.0, 0.0, 0.0, n)
7
+ desc = "Four roots, x^4 #{n}"
8
+
9
+ assert_rel z[0].re, sol[0], 1e-9, "#{desc}: z0.real"
10
+ assert_rel z[0].im, sol[1], 1e-9, "#{desc}: z0.imag"
11
+ assert_rel z[1].re, sol[2], 1e-9, "#{desc}: z1.real"
12
+ assert_rel z[1].im, sol[3], 1e-9, "#{desc}: z1.imag"
13
+ assert_rel z[2].re, sol[4], 1e-9, "#{desc}: z2.real"
14
+ assert_rel z[2].im, sol[5], 1e-9, "#{desc}: z2.imag"
15
+ assert_rel z[3].re, sol[6], 1e-9, "#{desc}: z3.real"
16
+ assert_rel z[3].im, sol[7], 1e-9, "#{desc}: z3.imag"
17
+ end
18
+
19
+ def test_quartic
20
+ return unless GSL::Poly.method_defined?(:complex_solve_quartic)
21
+
22
+ sol = 3.0 / Math.sqrt(2.0)
23
+
24
+ _test_quartic(-81.0, -3.0, 0.0, 0.0, -3.0, 0.0, 3.0, 3.0, 0.0)
25
+ _test_quartic(81.0, -sol, -sol, -sol, sol, sol, -sol, sol, sol)
26
+ end
27
+
28
+ end
@@ -0,0 +1,122 @@
1
+ require 'test_helper'
2
+
3
+ class RandistTest < GSL::TestCase
4
+
5
+ N = 100000
6
+ MULTI_DIM = 10
7
+
8
+ BINS = 100
9
+ STEPS = 100
10
+
11
+ R_GLOBAL = GSL::Rng.alloc
12
+
13
+ def test_shuffle
14
+ n = 10
15
+
16
+ count = GSL::Matrix.calloc(n, n)
17
+ x = GSL::Permutation.alloc(n)
18
+
19
+ N.times { |i|
20
+ n.times { |j| x[j] = j }
21
+ GSL::Ran.shuffle(R_GLOBAL, x)
22
+ n.times { |j| count.set(x[j], j, count[x[j], j] + 1) }
23
+ }
24
+
25
+ expected = N / 10.0
26
+
27
+ n.times { |i|
28
+ n.times { |j|
29
+ d = (count[i, j] - expected).abs
30
+
31
+ refute d > 1 && d / Math.sqrt(expected) > 5,
32
+ "gsl_ran_shuffle #{i},#{j} (#{count[i, j] / N} observed vs 0.1 expected)"
33
+ }
34
+ }
35
+ end
36
+
37
+ def _test_moments(name, arg, a, b, pp)
38
+ count, expected = 0, pp * N
39
+
40
+ N.times {
41
+ r = R_GLOBAL.send(*[name, arg].compact)
42
+ count += 1 if r < b && r > a
43
+ }
44
+
45
+ refute((count - expected).abs / Math.sqrt(expected) > 3,
46
+ "#{name}(#{arg}) [#{a},#{b}] (#{count.to_f / N} observed vs #{pp} expected)")
47
+ end
48
+
49
+ def _test_pdf(name, *args)
50
+ pdf = "#{name}_pdf"
51
+
52
+ a, b = -5.0, 5.0
53
+ dx = (b - a) / BINS
54
+
55
+ status = status_i = 0
56
+
57
+ count = GSL::Vector.calloc(BINS)
58
+ pp = GSL::Vector.calloc(BINS)
59
+
60
+ N.times { |i|
61
+ r = R_GLOBAL.send(name, *args)
62
+
63
+ if r < b && r > a
64
+ j = ((r - a) / dx).to_i
65
+ count[j] = count[j] + 1
66
+ end
67
+ }
68
+
69
+ BINS.times { |i|
70
+ x = a + i * dx
71
+ x = 0.0 if x.abs < 1e-10
72
+
73
+ sum = 0.0
74
+
75
+ STEPS.times { |j| sum += GSL::Ran.send(pdf, x + j * dx / STEPS, *args) }
76
+
77
+ pp[i] = 0.5 * (GSL::Ran.send(pdf, x, *args) + 2 * sum + GSL::Ran.send(pdf, x + dx - 1e-7, *args)) * dx / STEPS
78
+ }
79
+
80
+ BINS.times { |i|
81
+ x = a + i * dx
82
+ d = count[i] - N * pp[i]
83
+
84
+ status_i = (pp[i] == 0 ? count[i] != 0 : d < 1 && d / Math.sqrt(N * pp[i]) > 5) ? 1 : 0
85
+ status |= status_i
86
+
87
+ refute status_i == 1,
88
+ "#{name} [#{x},#{x + dx}) (#{count[i]}/#{N}=#{count.to_f / N} observed vs #{pp[i]} expected)"
89
+ }
90
+
91
+ assert status.zero?, "#{name}, sampling against pdf over range [#{a},#{b})"
92
+ end
93
+
94
+ def test_randist
95
+ _test_moments(:ugaussian, nil, 0.0, 100.0, 0.5)
96
+ _test_moments(:ugaussian, nil, -1.0, 1.0, 0.6826895)
97
+ _test_moments(:ugaussian, nil, 3.0, 3.5, 0.0011172689)
98
+ _test_moments(:ugaussian_tail, 3.0, 3.0, 3.5, 0.0011172689 / 0.0013498981)
99
+ _test_moments(:exponential, 2.0, 0.0, 1.0, 1 - Math.exp(-0.5))
100
+ _test_moments(:cauchy, 2.0, 0.0, 10000.0, 0.5)
101
+
102
+ _test_moments(:discrete, GSL::Ran::Discrete.alloc(GSL::Vector.alloc(0.59, 0.4, 0.01)), -0.5, 0.5, 0.59)
103
+ _test_moments(:discrete, GSL::Ran::Discrete.alloc(GSL::Vector.alloc(0.59, 0.4, 0.01)), 0.5, 1.5, 0.40)
104
+ _test_moments(:discrete, GSL::Ran::Discrete.alloc(GSL::Vector.alloc(0.59, 0.4, 0.01)), 1.5, 3.5, 0.01)
105
+
106
+ _test_moments(:discrete, GSL::Ran::Discrete.alloc(GSL::Vector.alloc(1, 9, 3, 4, 5, 8, 6, 7, 2, 0)), -0.5, 0.5, 1.0 / 45.0)
107
+ _test_moments(:discrete, GSL::Ran::Discrete.alloc(GSL::Vector.alloc(1, 9, 3, 4, 5, 8, 6, 7, 2, 0)), 8.5, 9.5, 0)
108
+
109
+ _test_pdf(:beta, 2.0, 3.0)
110
+ _test_pdf(:cauchy, 2.0)
111
+ _test_pdf(:chisq, 2.0)
112
+
113
+ _test_pdf(:exponential, 2.0)
114
+ _test_pdf(:exppow, 3.7, 0.3)
115
+ _test_pdf(:fdist, 3.0, 4.0)
116
+ _test_pdf(:flat, 3.0, 4.0)
117
+ _test_pdf(:gamma, 2.5, 2.17)
118
+ _test_pdf(:gaussian, 3.0)
119
+ _test_pdf(:ugaussian_tail, 0.1, 2.0)
120
+ end
121
+
122
+ end
@@ -0,0 +1,303 @@
1
+ require 'test_helper'
2
+
3
+ class RngTest < GSL::TestCase
4
+
5
+ N = 1000
6
+ N2 = 20000
7
+
8
+ BINS = 17
9
+ EXTRA = 10
10
+
11
+ {
12
+ 'rand' => [[1, 10000, 1910041713]],
13
+ 'randu' => [[1, 10000, 1623524161]],
14
+ 'cmrg' => [[1, 10000, 719452880]],
15
+ 'minstd' => [[1, 10000, 1043618065]],
16
+ 'mrg' => [[1, 10000, 2064828650]],
17
+ 'taus' => [[1, 10000, 2733957125]],
18
+ 'taus113' => [[1, 1000, 1925420673]],
19
+ 'transputer' => [[1, 10000, 1244127297]],
20
+ 'vax' => [[1, 10000, 3051034865]],
21
+
22
+ 'borosh13' => [[1, 10000, 2513433025]],
23
+ 'fishman18' => [[1, 10000, 330402013]],
24
+ 'fishman2x' => [[1, 10000, 540133597]],
25
+ 'knuthran2' => [[1, 10000, 1084477620]],
26
+ 'knuthran' => [[310952, 1009 * 2009 + 1, 461390032]],
27
+ 'lecuyer21' => [[1, 10000, 2006618587]],
28
+
29
+ 'waterman14' => [[1, 10000, 3776680385]],
30
+ 'coveyou' => [[6, 10000, 1416754246]],
31
+ 'fishman20' => [[6, 10000, 248127575]],
32
+ 'ranlux' => [[314159265, 10000, 12077992]],
33
+ 'ranlux389' => [[314159265, 10000, 165942]],
34
+ 'ranlxs0' => [[1, 10000, 11904320]],
35
+
36
+ 'ranlxs1' => [[1, 10000, 8734328]],
37
+ 'ranlxs2' => [[1, 10000, 6843140]],
38
+ 'ranlxd1' => [[1, 10000, 1998227290]],
39
+ 'ranlxd2' => [[1, 10000, 3949287736]],
40
+ 'slatec' => [[1, 10000, 45776]],
41
+ 'uni' => [[1, 10000, 9214]],
42
+ 'uni32' => [[1, 10000, 1155229825]],
43
+ 'zuf' => [[1, 10000, 3970]],
44
+
45
+ 'r250' => [[1, 10000, 1100653588]],
46
+ 'mt19937' => [[4357, 1000, 1186927261]],
47
+ 'mt19937_1999' => [[4357, 1000, 1030650439]],
48
+ 'mt19937_1998' => [[4357, 1000, 1309179303]],
49
+ 'tt800' => [[0, 10000, 2856609219]],
50
+
51
+ 'ran0' => [[0, 10000, 1115320064]],
52
+ 'ran1' => [[0, 10000, 1491066076]],
53
+ 'ran2' => [[0, 10000, 1701364455]],
54
+ 'ran3' => [[0, 10000, 186340785]],
55
+
56
+ 'ranmar' => [[1, 10000, 14428370]],
57
+
58
+ 'rand48' => [[0, 10000, 0xDE095043],
59
+ [1, 10000, 0xEDA54977]],
60
+
61
+ 'random_glibc2' => [[0, 10000, 1908609430]],
62
+ 'random8_glibc2' => [[0, 10000, 1910041713]],
63
+ 'random32_glibc2' => [[0, 10000, 1587395585]],
64
+ 'random64_glibc2' => [[0, 10000, 52848624]],
65
+ 'random128_glibc2' => [[0, 10000, 1908609430]],
66
+ 'random256_glibc2' => [[0, 10000, 179943260]],
67
+
68
+ 'random_bsd' => [[0, 10000, 1457025928]],
69
+ 'random8_bsd' => [[0, 10000, 1910041713]],
70
+ 'random32_bsd' => [[0, 10000, 1663114331]],
71
+ 'random64_bsd' => [[0, 10000, 864469165]],
72
+ 'random128_bsd' => [[0, 10000, 1457025928]],
73
+ 'random256_bsd' => [[0, 10000, 1216357476]],
74
+
75
+ 'random_libc5' => [[0, 10000, 428084942]],
76
+ 'random8_libc5' => [[0, 10000, 1910041713]],
77
+ 'random32_libc5' => [[0, 10000, 1967452027]],
78
+ 'random64_libc5' => [[0, 10000, 2106639801]],
79
+ 'random128_libc5' => [[0, 10000, 428084942]],
80
+ 'random256_libc5' => [[0, 10000, 116367984]],
81
+
82
+ 'ranf' => [[0, 10000, 2152890433],
83
+ [2, 10000, 339327233]]
84
+ }.each { |type, args|
85
+ args.each_with_index { |(seed, n, result), i|
86
+ define_method("test_#{type}_#{i}") {
87
+ r, k = GSL::Rng.alloc(type), nil
88
+ r.set(seed) if seed != 0
89
+
90
+ n.times { k = r.get }
91
+
92
+ assert k == result, "#{r.name}, #{n} steps (#{k} observed vs #{result} expected)"
93
+ }
94
+ }
95
+ }
96
+
97
+ GSL::Rng.types.each { |type|
98
+ define_method("test_float_#{type}") { _rng_float_test(type) }
99
+ define_method("test_state_#{type}") { _rng_state_test(type) }
100
+ define_method("test_parallel_state_#{type}") { _rng_parallel_state_test(type) }
101
+ define_method("test_read_write_#{type}") { _rng_read_write_test(type) }
102
+ define_method("test_generic_#{type}") { _generic_rng_test(type) }
103
+ }
104
+
105
+ def _rng_float_test(type)
106
+ ri = GSL::Rng.alloc(type)
107
+ rf = GSL::Rng.alloc(type)
108
+
109
+ status = k = 0
110
+
111
+ begin
112
+ k = ri.get
113
+ u = rf.get
114
+ end while k == 0
115
+
116
+ c = k / u
117
+
118
+ N2.times {
119
+ k = ri.get
120
+ u = rf.get
121
+
122
+ if c * k != u
123
+ status = 1
124
+ break
125
+ end
126
+ }
127
+
128
+ assert status.zero?, "#{ri.name}, ratio of int to double (#{c} observed vs #{k/u} expected)"
129
+ end
130
+
131
+ def _rng_state_test(type)
132
+ r = GSL::Rng.alloc(type)
133
+ r_save = GSL::Rng.alloc(type)
134
+
135
+ N.times { r.get }
136
+
137
+ GSL::Rng.memcpy(r_save, r)
138
+
139
+ test_a = GSL::Vector.alloc(N)
140
+ test_b = GSL::Vector.alloc(N)
141
+
142
+ N.times { |i| test_a[i] = r.get }
143
+
144
+ GSL::Rng.memcpy(r, r_save)
145
+ N.times { |i| test_b[i] = r.get }
146
+
147
+ assert((0...N).all? { |i| test_b[i] == test_a[i] }, "#{r.name}, random number state consistency")
148
+ end
149
+
150
+ def _rng_parallel_state_test(type)
151
+ r1 = GSL::Rng.alloc(type)
152
+ r2 = GSL::Rng.alloc(type)
153
+
154
+ test_a = GSL::Vector.alloc(N)
155
+ test_b = GSL::Vector.alloc(N)
156
+ test_c = GSL::Vector.alloc(N)
157
+ test_d = GSL::Vector.alloc(N)
158
+ test_e = GSL::Vector.alloc(N)
159
+ test_f = GSL::Vector.alloc(N)
160
+
161
+ N.times { r1.get }
162
+
163
+ GSL::Rng.memcpy(r2, r1)
164
+
165
+ N.times { |i|
166
+ test_a[i] = r1.get
167
+ test_b[i] = r2.get
168
+ test_c[i] = r1.uniform_int(1234)
169
+ test_d[i] = r2.uniform_int(1234)
170
+ test_e[i] = r1.uniform
171
+ test_f[i] = r2.uniform
172
+ }
173
+
174
+ assert((0...N).all? { |i| test_a[i] == test_b[i] }, "#{r1.name}, parallel random number state consistency (a/b)")
175
+ assert((0...N).all? { |i| test_c[i] == test_d[i] }, "#{r1.name}, parallel random number state consistency (c/d)")
176
+ assert((0...N).all? { |i| test_e[i] == test_f[i] }, "#{r1.name}, parallel random number state consistency (e/f)")
177
+ end
178
+
179
+ def _rng_read_write_test(type)
180
+ r = GSL::Rng.alloc(type)
181
+
182
+ test_a = GSL::Vector.alloc(N)
183
+ test_b = GSL::Vector.alloc(N)
184
+
185
+ N.times { r.get }
186
+
187
+ r.fwrite('test.dat')
188
+ N.times { |i| test_a[i] = r.get }
189
+
190
+ r.fread('test.dat')
191
+ N.times { |i| test_b[i] = r.get }
192
+
193
+ assert((0...N).all? { |i| test_b[i] == test_a[i] }, "#{r.name}, random number generator read and write")
194
+ ensure
195
+ File.delete('test.dat') if FileTest.exist?('test.dat')
196
+ end
197
+
198
+ def _generic_rng_test(type)
199
+ r = GSL::Rng.alloc(type)
200
+
201
+ name, ran_max, ran_min = r.name, r.max, r.min
202
+ kmax, kmin, sigma = 0, 1000, 0.0
203
+
204
+ kmax, status = _rng_max_test(r, ran_max)
205
+ assert status.zero?, "#{name}, observed vs theoretical maximum (#{kmax} vs #{ran_max})"
206
+
207
+ kmin, status = _rng_min_test(r, ran_min, ran_max)
208
+ assert status.zero?, "#{name}, observed vs theoretical minimum (#{kmin} vs #{ran_min})"
209
+
210
+ sigma, status = _rng_sum_test(r)
211
+ assert status.zero?, "#{r.name}, sum test within acceptable sigma (observed #{sigma} sigma)"
212
+
213
+ sigma, status = _rng_bin_test(r)
214
+ assert status.zero?, "#{r.name}, bin test within acceptable chisq (observed #{sigma} sigma)"
215
+
216
+ r.set(1)
217
+ kmax, status = _rng_max_test(r, ran_max)
218
+
219
+ r.set(1)
220
+ kmin, s = _rng_min_test(r, ran_min, ran_max)
221
+ status |= s
222
+
223
+ r.set(1)
224
+ sigma, s = _rng_sum_test(r)
225
+ status |= s
226
+
227
+ r.set(12345)
228
+ kmax, s = _rng_max_test(r, ran_max)
229
+ status |= s
230
+
231
+ r.set(12345)
232
+ kmin, s = _rng_min_test(r, ran_min, ran_max)
233
+ status |= s
234
+
235
+ r.set(12345)
236
+ sigma, s = _rng_sum_test(r)
237
+ status |= s
238
+
239
+ assert status.zero?, "#{r.name}, maximum and sum tests for non-default seeds"
240
+ end
241
+
242
+ def _rng_max_test(r, ran_max)
243
+ max = 0
244
+
245
+ N2.times {
246
+ k = r.get
247
+ max = k if k > max
248
+ }
249
+
250
+ actual_uncovered = ran_max - max
251
+ expect_uncovered = ran_max.to_f / N2.to_f
252
+
253
+ [max, max > ran_max || actual_uncovered > 7 * expect_uncovered ? 1 : 0]
254
+ end
255
+
256
+ def _rng_min_test(r, ran_min, ran_max)
257
+ min = 1000000000
258
+
259
+ N2.times {
260
+ k = r.get
261
+ min = k if k < min
262
+ }
263
+
264
+ actual_uncovered = min - ran_min
265
+ expect_uncovered = ran_max.to_f / N2.to_f
266
+
267
+ [min, min < ran_min || actual_uncovered > 7 * expect_uncovered ? 1 : 0]
268
+ end
269
+
270
+ def _rng_sum_test(r)
271
+ sum = 0.0
272
+
273
+ N2.times {
274
+ x = r.uniform - 0.5
275
+ sum += x
276
+ }
277
+
278
+ sum /= N2.to_f
279
+ sigma = sum * Math.sqrt(12.0 * N2)
280
+
281
+ [sigma, sigma.abs > 3 || sigma.abs < 0.003 ? 1 : 0]
282
+ end
283
+
284
+ def _rng_bin_test(r)
285
+ count = GSL::Vector.calloc(BINS + EXTRA)
286
+ chisq = 0.0
287
+
288
+ N2.times { count[r.uniform_int(BINS)] += 1 }
289
+
290
+ BINS.times { |i|
291
+ x = N2.to_f / BINS
292
+ d = count[i] - x
293
+ chisq += d * d / x
294
+ }
295
+
296
+ BINS.upto(EXTRA - 1) { |i|
297
+ assert count[i].zero?, "#{r.name}, wrote outside range in bin test (#{i} observed vs #{BINS - 1} expected)"
298
+ }
299
+
300
+ [sigma = Math.sqrt(chisq / BINS), sigma.abs > 3 || sigma.abs < 0.003 ? 1 : 0]
301
+ end
302
+
303
+ end