finishm 0.0.1
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TTAGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCATGCCTAACACATGCAAGTCGAACGAGACCTTCGGGTCTAGTGGCGCACGGGTGCGTAACGCGTGGGAATCTGCCCTCTGGTACGGAATAACTCAGGGAAACTTGAGCTAATACCGTATAATGACTTCGGTCCAAAGATTTATCGCCTGAGGATGAGCCCGCGTAGGATTAGCTTGTTGGTGAGGTAAAAGCTCACCAAGGCGACGATCCTTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGAGTGATGAAGGCCTTAGGGTTGTAAAGCTCTTTTACCCGGGATGATAATGACAGTACCGGGAGAATAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGCTTTGTAAGTTAGAGGTGAAAGCCCGGGGCTCAACTCCGGAATTGCCTTTAAGACTGCATCGCTAGAATTGTGGAGAGGTAAGTGGAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAAGAACACCAGTGGCGAAGGCGACTTACTGGACACATATTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATGACTAGCTGTCCGGGCACTTAGTGCTTGGGTGGCGCAGCTAACGCGTTAAGTCATCCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAAGAAATTGACGGGGGCCTGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAGCGTTTGACATGGTAGGACGGTTTCCAGAGATGGATTCCTTCCCTTACGGGACCTACACACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTCTTTAGTTGCTACCATTTAGTTGAGCACTCTAAAGAAACTGCCGGTGATAAGCCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTACGCGCTGGGCTACACACGTGCTACAATGGCGGTGACAGAGGGCAGCAAACCCGCGAGGGTGAGCTAATCTCCAAAAGCCGTCTCAGTTCGGATTGTTCTCTGCAACTCGAGAGCATGAAGGCGGAATCGCTAGTAATCGCGGATCAGCACGCCGCGGTGAATACGTTCCCAGGCCTTGTACACACCGCCCGTCACACCATGGGAGTTGGATTGACCCGAAGGTGGTGAGCTAACCCGCAAGGGAGGCAGCCAACCACGGTCGGTTCAGCGACTGGGGTGAAGTCGTAACAAGGTAACC
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|
+
AACGAACGCTGGCGGCATGCCTAACACATGCAAGTCGAACGAGACCTTCGGGTCTAGTGGCGCACGGGTGCGTAACGCGTGGGAATCTGCCCTTGGGTACGGAATAACAGTTAGAAATGACTGCTAATACCGTATAATGACTTCGGTCCAAAGATTTATCGCCCAGGGATGAGCCCGCGTAGGATTAGCTTGTTGGTGAGGTAAAGGCTCACCAAGGCGACGATCCTTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACATGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGAGTGATGAAGGCCTTAGGGTTGTAAAGCTCTTTTACCCGGGATGATAATGACAGTACCGGGAGAATAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGCTTTGTAAGTTAGAGGTGAAAGCCCGGGGCTCAACTCCGGAATTGCCTTTAAGACTGCATCGCTAGAATTGTGGAGAGGTGAGTGGAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAAGAACACCAGTGGCGAAGGCGACTCACTGGACACATATTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATGACTAGCTGTCGGGGCGCTTAGCGTTTCGGTGGCGCAGCTAACGCGTTAAGTCATCCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAAGAAATTGACGGGGGCCTGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAGCGTTTGACATGGTAGGACGGTTTCCAGAGATGGATTCCTACCCTTACGGGACCTACACACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTCTTTGGTTGCTACCATTTAGTTGAGCACTCTAAAAAAACTGCCGGTGATAAGCCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATAGCCCTTACGCGCTGGGCTACACACGTGCTACAATGGCGGTGACAGAGGGCAGCAAACCCGCGAGGGTGAGCTAATCTCCAAAAGCCGTCTCAGTTCGGATTGTTCTCTGCAACTCGAGAGCATGAAGGCGGAATCGCTAGTAATCGCGGATCAGCACGCCGCGGTGAATACGTTCCCAGGCCTTGTACACACCGCCCGTCACATCACGAAAGTCGGTTGCACTAGAAGTCGGTGGGCTAACCCGCAAGGGAGGCAGCCGCCTAAAGTGTGATCGGTAATTGGGGTG
|
@@ -0,0 +1,171 @@
|
|
1
|
+
>r1
|
2
|
+
CACTTATCTCTACCAAAGATCACGATTTAGAATCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGA
|
3
|
+
>r2
|
4
|
+
TCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGATTCGGAGTTAAAAAAGTAGATTCAG
|
5
|
+
>r3
|
6
|
+
GAAAATATTTCAATAGATCTTGCAGGCGCAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAAT
|
7
|
+
>r4
|
8
|
+
CAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
9
|
+
>r4.slightly_different
|
10
|
+
CAGCTTTTTCTGTTAGGGATGGGGATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
11
|
+
>r5
|
12
|
+
ATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTA
|
13
|
+
>r6
|
14
|
+
ATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTATATTTACTGGTTTAAAAGAAGGAGATTACTTTATAAAAGAAGAAAAAGCTCCTAAAGGGTATAGCCTTTTAAAAGAACCAGTAAAAGTTACTATAACAGCTCAAAAAGATGATAATGGAGAGTATACTGGTCAAGCAACTATATCTGTAACTAATGGCAATGAAGCTGGAAGTATAATAAATAATATTACTATGAATGATGGCAATGTATTATTTAATGTACAAATTAAAAACTATGCTGGTATTTCACTTCCAGGTACAGG
|
15
|
+
|
16
|
+
|
17
|
+
>r_again1
|
18
|
+
CACTTATCTCTACCAAAGATCACGATTTAGAATCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGA
|
19
|
+
>r_again2
|
20
|
+
TCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGATTCGGAGTTAAAAAAGTAGATTCAG
|
21
|
+
>r_again3
|
22
|
+
GAAAATATTTCAATAGATCTTGCAGGCGCAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAAT
|
23
|
+
>r_again4
|
24
|
+
CAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
25
|
+
>r_again4.slightly_different
|
26
|
+
CAGCTTTTTCTGTTAGGGATGGGGATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
27
|
+
>r_again5
|
28
|
+
ATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTA
|
29
|
+
>r_again6
|
30
|
+
ATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTATATTTACTGGTTTAAAAGAAGGAGATTACTTTATAAAAGAAGAAAAAGCTCCTAAAGGGTATAGCCTTTTAAAAGAACCAGTAAAAGTTACTATAACAGCTCAAAAAGATGATAATGGAGAGTATACTGGTCAAGCAACTATATCTGTAACTAATGGCAATGAAGCTGGAAGTATAATAAATAATATTACTATGAATGATGGCAATGTATTATTTAATGTACAAATTAAAAACTATGCTGGTATTTCACTTCCAGGTACAGG
|
31
|
+
|
32
|
+
|
33
|
+
>r_again1
|
34
|
+
CACTTATCTCTACCAAAGATCACGATTTAGAATCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGA
|
35
|
+
>r_again2
|
36
|
+
TCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGATTCGGAGTTAAAAAAGTAGATTCAG
|
37
|
+
>r_again3
|
38
|
+
GAAAATATTTCAATAGATCTTGCAGGCGCAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAAT
|
39
|
+
>r_again4
|
40
|
+
CAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
41
|
+
>r_again4.slightly_different
|
42
|
+
CAGCTTTTTCTGTTAGGGATGGGGATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
43
|
+
>r_again5
|
44
|
+
ATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTA
|
45
|
+
>r_again6
|
46
|
+
ATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTATATTTACTGGTTTAAAAGAAGGAGATTACTTTATAAAAGAAGAAAAAGCTCCTAAAGGGTATAGCCTTTTAAAAGAACCAGTAAAAGTTACTATAACAGCTCAAAAAGATGATAATGGAGAGTATACTGGTCAAGCAACTATATCTGTAACTAATGGCAATGAAGCTGGAAGTATAATAAATAATATTACTATGAATGATGGCAATGTATTATTTAATGTACAAATTAAAAACTATGCTGGTATTTCACTTCCAGGTACAGG
|
47
|
+
|
48
|
+
|
49
|
+
>r_again1
|
50
|
+
CACTTATCTCTACCAAAGATCACGATTTAGAATCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGA
|
51
|
+
>r_again2
|
52
|
+
TCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGATTCGGAGTTAAAAAAGTAGATTCAG
|
53
|
+
>r_again3
|
54
|
+
GAAAATATTTCAATAGATCTTGCAGGCGCAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAAT
|
55
|
+
>r_again4
|
56
|
+
CAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
57
|
+
>r_again4.slightly_different
|
58
|
+
CAGCTTTTTCTGTTAGGGATGGGGATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
59
|
+
>r_again5
|
60
|
+
ATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTA
|
61
|
+
>r_again6
|
62
|
+
ATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTATATTTACTGGTTTAAAAGAAGGAGATTACTTTATAAAAGAAGAAAAAGCTCCTAAAGGGTATAGCCTTTTAAAAGAACCAGTAAAAGTTACTATAACAGCTCAAAAAGATGATAATGGAGAGTATACTGGTCAAGCAACTATATCTGTAACTAATGGCAATGAAGCTGGAAGTATAATAAATAATATTACTATGAATGATGGCAATGTATTATTTAATGTACAAATTAAAAACTATGCTGGTATTTCACTTCCAGGTACAGG
|
63
|
+
|
64
|
+
|
65
|
+
>r_again1
|
66
|
+
CACTTATCTCTACCAAAGATCACGATTTAGAATCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGA
|
67
|
+
>r_again2
|
68
|
+
TCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGATTCGGAGTTAAAAAAGTAGATTCAG
|
69
|
+
>r_again3
|
70
|
+
GAAAATATTTCAATAGATCTTGCAGGCGCAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAAT
|
71
|
+
>r_again4
|
72
|
+
CAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
73
|
+
>r_again4.slightly_different
|
74
|
+
CAGCTTTTTCTGTTAGGGATGGGGATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
75
|
+
>r_again5
|
76
|
+
ATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTA
|
77
|
+
>r_again6
|
78
|
+
ATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTATATTTACTGGTTTAAAAGAAGGAGATTACTTTATAAAAGAAGAAAAAGCTCCTAAAGGGTATAGCCTTTTAAAAGAACCAGTAAAAGTTACTATAACAGCTCAAAAAGATGATAATGGAGAGTATACTGGTCAAGCAACTATATCTGTAACTAATGGCAATGAAGCTGGAAGTATAATAAATAATATTACTATGAATGATGGCAATGTATTATTTAATGTACAAATTAAAAACTATGCTGGTATTTCACTTCCAGGTACAGG
|
79
|
+
|
80
|
+
|
81
|
+
>r_again1
|
82
|
+
CACTTATCTCTACCAAAGATCACGATTTAGAATCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGA
|
83
|
+
>r_again2
|
84
|
+
TCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGATTCGGAGTTAAAAAAGTAGATTCAG
|
85
|
+
>r_again3
|
86
|
+
GAAAATATTTCAATAGATCTTGCAGGCGCAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAAT
|
87
|
+
>r_again4
|
88
|
+
CAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
89
|
+
>r_again4.slightly_different
|
90
|
+
CAGCTTTTTCTGTTAGGGATGGGGATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
91
|
+
>r_again5
|
92
|
+
ATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTA
|
93
|
+
>r_again6
|
94
|
+
ATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTATATTTACTGGTTTAAAAGAAGGAGATTACTTTATAAAAGAAGAAAAAGCTCCTAAAGGGTATAGCCTTTTAAAAGAACCAGTAAAAGTTACTATAACAGCTCAAAAAGATGATAATGGAGAGTATACTGGTCAAGCAACTATATCTGTAACTAATGGCAATGAAGCTGGAAGTATAATAAATAATATTACTATGAATGATGGCAATGTATTATTTAATGTACAAATTAAAAACTATGCTGGTATTTCACTTCCAGGTACAGG
|
95
|
+
|
96
|
+
|
97
|
+
>r_again1
|
98
|
+
CACTTATCTCTACCAAAGATCACGATTTAGAATCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGA
|
99
|
+
>r_again2
|
100
|
+
TCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGATTCGGAGTTAAAAAAGTAGATTCAG
|
101
|
+
>r_again3
|
102
|
+
GAAAATATTTCAATAGATCTTGCAGGCGCAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAAT
|
103
|
+
>r_again4
|
104
|
+
CAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
105
|
+
>r_again4.slightly_different
|
106
|
+
CAGCTTTTTCTGTTAGGGATGGGGATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGG
|
107
|
+
>r_again5
|
108
|
+
ATAAAAATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTA
|
109
|
+
>r_again6
|
110
|
+
ATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTATATTTACTGGTTTAAAAGAAGGAGATTACTTTATAAAAGAAGAAAAAGCTCCTAAAGGGTATAGCCTTTTAAAAGAACCAGTAAAAGTTACTATAACAGCTCAAAAAGATGATAATGGAGAGTATACTGGTCAAGCAACTATATCTGTAACTAATGGCAATGAAGCTGGAAGTATAATAAATAATATTACTATGAATGATGGCAATGTATTATTTAATGTACAAATTAAAAACTATGCTGGTATTTCACTTCCAGGTACAGG
|
111
|
+
|
112
|
+
|
113
|
+
|
114
|
+
|
115
|
+
>r_again1_revcom
|
116
|
+
TCCCCATGTATAAGTTGTTACTTTATCTTCTAAAACTTTATAGTTTGATTCTAAATCGTGATCTTTGGTAGAGATAAGTG
|
117
|
+
>r_again2_revcom
|
118
|
+
CTGAATCTACTTTTTTAACTCCGAATCCCCATGTATAAGTTGTTACTTTATCTTCTAAAACTTTATAGTTTGA
|
119
|
+
>r_again3_revcom
|
120
|
+
ATTTACCAATTACATTACCATTTTTATCCCTAACAGAAAAAGCTGCGCCTGCAAGATCTATTGAAATATTTTC
|
121
|
+
>r_again4_revcom
|
122
|
+
CCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCATTTTTATCCCTAACAGAAAAAGCTG
|
123
|
+
>r_again4.slightly_different_revcom
|
124
|
+
CCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCATCCCCATCCCTAACAGAAAAAGCTG
|
125
|
+
>r_again5_revcom
|
126
|
+
TAACTCGTCCATTTTTATCAGTTACACCCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCATTTTTAT
|
127
|
+
>r_again6_revcom
|
128
|
+
CCTGTACCTGGAAGTGAAATACCAGCATAGTTTTTAATTTGTACATTAAATAATACATTGCCATCATTCATAGTAATATTATTTATTATACTTCCAGCTTCATTGCCATTAGTTACAGATATAGTTGCTTGACCAGTATACTCTCCATTATCATCTTTTTGAGCTGTTATAGTAACTTTTACTGGTTCTTTTAAAAGGCTATACCCTTTAGGAGCTTTTTCTTCTTTTATAAAGTAATCTCCTTCTTTTAAACCAGTAAATATAACTCGTCCATTTTTATCAGTTACACCCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACAT
|
129
|
+
>r_again1_revcom
|
130
|
+
TCCCCATGTATAAGTTGTTACTTTATCTTCTAAAACTTTATAGTTTGATTCTAAATCGTGATCTTTGGTAGAGATAAGTG
|
131
|
+
>r_again2_revcom
|
132
|
+
CTGAATCTACTTTTTTAACTCCGAATCCCCATGTATAAGTTGTTACTTTATCTTCTAAAACTTTATAGTTTGA
|
133
|
+
>r_again3_revcom
|
134
|
+
ATTTACCAATTACATTACCATTTTTATCCCTAACAGAAAAAGCTGCGCCTGCAAGATCTATTGAAATATTTTC
|
135
|
+
>r_again4_revcom
|
136
|
+
CCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCATTTTTATCCCTAACAGAAAAAGCTG
|
137
|
+
>r_again4.slightly_different_revcom
|
138
|
+
CCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCATCCCCATCCCTAACAGAAAAAGCTG
|
139
|
+
>r_again5_revcom
|
140
|
+
TAACTCGTCCATTTTTATCAGTTACACCCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCATTTTTAT
|
141
|
+
>r_again6_revcom
|
142
|
+
CCTGTACCTGGAAGTGAAATACCAGCATAGTTTTTAATTTGTACATTAAATAATACATTGCCATCATTCATAGTAATATTATTTATTATACTTCCAGCTTCATTGCCATTAGTTACAGATATAGTTGCTTGACCAGTATACTCTCCATTATCATCTTTTTGAGCTGTTATAGTAACTTTTACTGGTTCTTTTAAAAGGCTATACCCTTTAGGAGCTTTTTCTTCTTTTATAAAGTAATCTCCTTCTTTTAAACCAGTAAATATAACTCGTCCATTTTTATCAGTTACACCCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACAT
|
143
|
+
>r_again1_revcom
|
144
|
+
TCCCCATGTATAAGTTGTTACTTTATCTTCTAAAACTTTATAGTTTGATTCTAAATCGTGATCTTTGGTAGAGATAAGTG
|
145
|
+
>r_again2_revcom
|
146
|
+
CTGAATCTACTTTTTTAACTCCGAATCCCCATGTATAAGTTGTTACTTTATCTTCTAAAACTTTATAGTTTGA
|
147
|
+
>r_again3_revcom
|
148
|
+
ATTTACCAATTACATTACCATTTTTATCCCTAACAGAAAAAGCTGCGCCTGCAAGATCTATTGAAATATTTTC
|
149
|
+
>r_again4_revcom
|
150
|
+
CCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCATTTTTATCCCTAACAGAAAAAGCTG
|
151
|
+
>r_again4.slightly_different_revcom
|
152
|
+
CCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCATCCCCATCCCTAACAGAAAAAGCTG
|
153
|
+
>r_again5_revcom
|
154
|
+
TAACTCGTCCATTTTTATCAGTTACACCCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCATTTTTAT
|
155
|
+
>r_again6_revcom
|
156
|
+
CCTGTACCTGGAAGTGAAATACCAGCATAGTTTTTAATTTGTACATTAAATAATACATTGCCATCATTCATAGTAATATTATTTATTATACTTCCAGCTTCATTGCCATTAGTTACAGATATAGTTGCTTGACCAGTATACTCTCCATTATCATCTTTTTGAGCTGTTATAGTAACTTTTACTGGTTCTTTTAAAAGGCTATACCCTTTAGGAGCTTTTTCTTCTTTTATAAAGTAATCTCCTTCTTTTAAACCAGTAAATATAACTCGTCCATTTTTATCAGTTACACCCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACAT
|
157
|
+
>r_again1_revcom
|
158
|
+
TCCCCATGTATAAGTTGTTACTTTATCTTCTAAAACTTTATAGTTTGATTCTAAATCGTGATCTTTGGTAGAGATAAGTG
|
159
|
+
>r_again2_revcom
|
160
|
+
CTGAATCTACTTTTTTAACTCCGAATCCCCATGTATAAGTTGTTACTTTATCTTCTAAAACTTTATAGTTTGA
|
161
|
+
>r_again3_revcom
|
162
|
+
ATTTACCAATTACATTACCATTTTTATCCCTAACAGAAAAAGCTGCGCCTGCAAGATCTATTGAAATATTTTC
|
163
|
+
>r_again4_revcom
|
164
|
+
CCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCATTTTTATCCCTAACAGAAAAAGCTG
|
165
|
+
>r_again4.slightly_different_revcom
|
166
|
+
CCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCATCCCCATCCCTAACAGAAAAAGCTG
|
167
|
+
>r_again5_revcom
|
168
|
+
TAACTCGTCCATTTTTATCAGTTACACCCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCATTTTTAT
|
169
|
+
>r_again6_revcom
|
170
|
+
CCTGTACCTGGAAGTGAAATACCAGCATAGTTTTTAATTTGTACATTAAATAATACATTGCCATCATTCATAGTAATATTATTTATTATACTTCCAGCTTCATTGCCATTAGTTACAGATATAGTTGCTTGACCAGTATACTCTCCATTATCATCTTTTTGAGCTGTTATAGTAACTTTTACTGGTTCTTTTAAAAGGCTATACCCTTTAGGAGCTTTTTCTTCTTTTATAAAGTAATCTCCTTCTTTTAAACCAGTAAATATAACTCGTCCATTTTTATCAGTTACACCCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACAT
|
171
|
+
|
@@ -0,0 +1,5 @@
|
|
1
|
+
>to_gapfill
|
2
|
+
CACTTATCTCTACCAAAGATCACGATTTAGAATCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGATTCGGAGTTAAAAAAGTAGATTCAGAAAATATTTCAATAGATCTTGCAGGCGCAGCTTTTTCTGTTAGGG
|
3
|
+
NNNNNNATGGTAATGTAATTGGTAAATATACGTATGATTCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTATATTTACTGGTTTAAAAGAAGGAGATTACTTTATAAAAGAAGAAAAAGCTCCTAAAGGGTATAGCCTTTTAAAAGAACCAGTAAAAGTTACTATAACAGCTCAAAAAGATGATAATGGAGAGTATACTGGTCAAGCAACTATATCTGTAACTAATGGCAATGAAGCTGGAAGTATAATAAATAATATTACTATGAATGATGGCAATGTATTATTTAATGTACAAATTAAAAACTATGCTGGTATTTCACTTCCAGGTACAGG
|
4
|
+
|
5
|
+
|
@@ -0,0 +1,130 @@
|
|
1
|
+
3 79 33 1
|
2
|
+
NODE 1 156 67 67 1760 1760
|
3
|
+
TCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGATTCGGAGTTAAAAAAGTAGATTCAGAAAATATTTCAATAGATCTTGCAGGCGCAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAATATACGTATGAT
|
4
|
+
TTTTATCCCTAACAGAAAAAGCTGCGCCTGCAAGATCTATTGAAATATTTTCTGAATCTACTTTTTTAACTCCGAATCCCCATGTATAAGTTGTTACTTTATCTTCTAAAACTTTATAGTTTGATTCTAAATCGTGATCTTTGGTAGAGATAAGTG
|
5
|
+
NODE 2 323 69 69 4906 4906
|
6
|
+
TCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTATATTTACTGGTTTAAAAGAAGGAGATTACTTTATAAAAGAAGAAAAAGCTCCTAAAGGGTATAGCCTTTTAAAAGAACCAGTAAAAGTTACTATAACAGCTCAAAAAGATGATAATGGAGAGTATACTGGTCAAGCAACTATATCTGTAACTAATGGCAATGAAGCTGGAAGTATAATAAATAATATTACTATGAATGATGGCAATGTATTATTTAATGTACAAATTAAAAACTATGCTGGTATTTCACTTCCAGGTACAGG
|
7
|
+
TTTAATTTGTACATTAAATAATACATTGCCATCATTCATAGTAATATTATTTATTATACTTCCAGCTTCATTGCCATTAGTTACAGATATAGTTGCTTGACCAGTATACTCTCCATTATCATCTTTTTGAGCTGTTATAGTAACTTTTACTGGTTCTTTTAAAAGGCTATACCCTTTAGGAGCTTTTTCTTCTTTTATAAAGTAATCTCCTTCTTTTAAACCAGTAAATATAACTCGTCCATTTTTATCAGTTACACCCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCAT
|
8
|
+
NODE 3 24 0 0 264 264
|
9
|
+
GTAATTGGTAAATATACGTATGAT
|
10
|
+
CCCCATCCCTAACAGAAAAAGCTG
|
11
|
+
ARC 1 2 22
|
12
|
+
ARC -2 -3 11
|
13
|
+
NR -3 4
|
14
|
+
56 0 34
|
15
|
+
63 0 34
|
16
|
+
70 0 34
|
17
|
+
77 0 34
|
18
|
+
NR -2 16
|
19
|
+
55 289 0
|
20
|
+
56 289 0
|
21
|
+
57 262 0
|
22
|
+
58 0 0
|
23
|
+
62 289 0
|
24
|
+
63 289 0
|
25
|
+
64 262 0
|
26
|
+
65 0 0
|
27
|
+
69 289 0
|
28
|
+
70 289 0
|
29
|
+
71 262 0
|
30
|
+
72 0 0
|
31
|
+
76 289 0
|
32
|
+
77 289 0
|
33
|
+
78 262 0
|
34
|
+
79 0 0
|
35
|
+
NR -1 20
|
36
|
+
52 108 0
|
37
|
+
53 83 0
|
38
|
+
54 11 0
|
39
|
+
55 0 34
|
40
|
+
57 0 61
|
41
|
+
59 108 0
|
42
|
+
60 83 0
|
43
|
+
61 11 0
|
44
|
+
62 0 34
|
45
|
+
64 0 61
|
46
|
+
66 108 0
|
47
|
+
67 83 0
|
48
|
+
68 11 0
|
49
|
+
69 0 34
|
50
|
+
71 0 61
|
51
|
+
73 108 0
|
52
|
+
74 83 0
|
53
|
+
75 11 0
|
54
|
+
76 0 34
|
55
|
+
78 0 61
|
56
|
+
NR 1 36
|
57
|
+
1 51 0
|
58
|
+
3 0 0
|
59
|
+
4 32 0
|
60
|
+
5 104 0
|
61
|
+
6 132 0
|
62
|
+
8 150 0
|
63
|
+
10 0 0
|
64
|
+
11 32 0
|
65
|
+
12 104 0
|
66
|
+
13 132 0
|
67
|
+
15 150 0
|
68
|
+
17 0 0
|
69
|
+
18 32 0
|
70
|
+
19 104 0
|
71
|
+
20 132 0
|
72
|
+
22 150 0
|
73
|
+
24 0 0
|
74
|
+
25 32 0
|
75
|
+
26 104 0
|
76
|
+
27 132 0
|
77
|
+
29 150 0
|
78
|
+
31 0 0
|
79
|
+
32 32 0
|
80
|
+
33 104 0
|
81
|
+
34 132 0
|
82
|
+
36 150 0
|
83
|
+
38 0 0
|
84
|
+
39 32 0
|
85
|
+
40 104 0
|
86
|
+
41 132 0
|
87
|
+
43 150 0
|
88
|
+
45 0 0
|
89
|
+
46 32 0
|
90
|
+
47 104 0
|
91
|
+
48 132 0
|
92
|
+
50 150 0
|
93
|
+
NR 2 29
|
94
|
+
2 0 0
|
95
|
+
6 0 24
|
96
|
+
7 0 24
|
97
|
+
8 0 6
|
98
|
+
9 6 0
|
99
|
+
13 0 24
|
100
|
+
14 0 24
|
101
|
+
15 0 6
|
102
|
+
16 6 0
|
103
|
+
20 0 24
|
104
|
+
21 0 24
|
105
|
+
22 0 6
|
106
|
+
23 6 0
|
107
|
+
27 0 24
|
108
|
+
28 0 24
|
109
|
+
29 0 6
|
110
|
+
30 6 0
|
111
|
+
34 0 24
|
112
|
+
35 0 24
|
113
|
+
36 0 6
|
114
|
+
37 6 0
|
115
|
+
41 0 24
|
116
|
+
42 0 24
|
117
|
+
43 0 6
|
118
|
+
44 6 0
|
119
|
+
48 0 24
|
120
|
+
49 0 24
|
121
|
+
50 0 6
|
122
|
+
51 6 0
|
123
|
+
NR 3 7
|
124
|
+
7 0 0
|
125
|
+
14 0 0
|
126
|
+
21 0 0
|
127
|
+
28 0 0
|
128
|
+
35 0 0
|
129
|
+
42 0 0
|
130
|
+
49 0 0
|
@@ -0,0 +1,130 @@
|
|
1
|
+
3 79 33 1
|
2
|
+
NODE 1 156 67 67 1760 1760
|
3
|
+
TCAAACTATAAAGTTTTAGAAGATAAAGTAACAACTTATACATGGGGATTCGGAGTTAAAAAAGTAGATTCAGAAAATATTTCAATAGATCTTGCAGGCGCAGCTTTTTCTGTTAGGGATAAAAATGGTAATGTAATTGGTAAATATACGTATGAT
|
4
|
+
TTTTATCCCTAACAGAAAAAGCTGCGCCTGCAAGATCTATTGAAATATTTTCTGAATCTACTTTTTTAACTCCGAATCCCCATGTATAAGTTGTTACTTTATCTTCTAAAACTTTATAGTTTGATTCTAAATCGTGATCTTTGGTAGAGATAAGTG
|
5
|
+
NODE 2 323 69 69 4906 4906
|
6
|
+
TCTACTGGAAATGTGGTTTTATTAAAAGGAAAGGGTGTAACTGATAAAAATGGACGAGTTATATTTACTGGTTTAAAAGAAGGAGATTACTTTATAAAAGAAGAAAAAGCTCCTAAAGGGTATAGCCTTTTAAAAGAACCAGTAAAAGTTACTATAACAGCTCAAAAAGATGATAATGGAGAGTATACTGGTCAAGCAACTATATCTGTAACTAATGGCAATGAAGCTGGAAGTATAATAAATAATATTACTATGAATGATGGCAATGTATTATTTAATGTACAAATTAAAAACTATGCTGGTATTTCACTTCCAGGTACAGG
|
7
|
+
TTTAATTTGTACATTAAATAATACATTGCCATCATTCATAGTAATATTATTTATTATACTTCCAGCTTCATTGCCATTAGTTACAGATATAGTTGCTTGACCAGTATACTCTCCATTATCATCTTTTTGAGCTGTTATAGTAACTTTTACTGGTTCTTTTAAAAGGCTATACCCTTTAGGAGCTTTTTCTTCTTTTATAAAGTAATCTCCTTCTTTTAAACCAGTAAATATAACTCGTCCATTTTTATCAGTTACACCCTTTCCTTTTAATAAAACCACATTTCCAGTAGAATCATACGTATATTTACCAATTACATTACCAT
|
8
|
+
NODE 3 24 0 0 264 264
|
9
|
+
GTAATTGGTAAATATACGTATGAT
|
10
|
+
CCCCATCCCTAACAGAAAAAGCTG
|
11
|
+
ARC 1 2 22
|
12
|
+
ARC -2 -3 11
|
13
|
+
NR -3 4
|
14
|
+
56 0 34
|
15
|
+
63 0 34
|
16
|
+
70 0 34
|
17
|
+
77 0 34
|
18
|
+
NR -2 16
|
19
|
+
55 289 0
|
20
|
+
56 289 0
|
21
|
+
57 262 0
|
22
|
+
58 0 0
|
23
|
+
62 289 0
|
24
|
+
63 289 0
|
25
|
+
64 262 0
|
26
|
+
65 0 0
|
27
|
+
69 289 0
|
28
|
+
70 289 0
|
29
|
+
71 262 0
|
30
|
+
72 0 0
|
31
|
+
76 289 0
|
32
|
+
77 289 0
|
33
|
+
78 262 0
|
34
|
+
79 0 0
|
35
|
+
NR -1 20
|
36
|
+
52 108 0
|
37
|
+
53 83 0
|
38
|
+
54 11 0
|
39
|
+
55 0 34
|
40
|
+
57 0 61
|
41
|
+
59 108 0
|
42
|
+
60 83 0
|
43
|
+
61 11 0
|
44
|
+
62 0 34
|
45
|
+
64 0 61
|
46
|
+
66 108 0
|
47
|
+
67 83 0
|
48
|
+
68 11 0
|
49
|
+
69 0 34
|
50
|
+
71 0 61
|
51
|
+
73 108 0
|
52
|
+
74 83 0
|
53
|
+
75 11 0
|
54
|
+
76 0 34
|
55
|
+
78 0 61
|
56
|
+
NR 1 36
|
57
|
+
1 51 0
|
58
|
+
3 0 0
|
59
|
+
4 32 0
|
60
|
+
5 104 0
|
61
|
+
6 132 0
|
62
|
+
8 150 0
|
63
|
+
10 0 0
|
64
|
+
11 32 0
|
65
|
+
12 104 0
|
66
|
+
13 132 0
|
67
|
+
15 150 0
|
68
|
+
17 0 0
|
69
|
+
18 32 0
|
70
|
+
19 104 0
|
71
|
+
20 132 0
|
72
|
+
22 150 0
|
73
|
+
24 0 0
|
74
|
+
25 32 0
|
75
|
+
26 104 0
|
76
|
+
27 132 0
|
77
|
+
29 150 0
|
78
|
+
31 0 0
|
79
|
+
32 32 0
|
80
|
+
33 104 0
|
81
|
+
34 132 0
|
82
|
+
36 150 0
|
83
|
+
38 0 0
|
84
|
+
39 32 0
|
85
|
+
40 104 0
|
86
|
+
41 132 0
|
87
|
+
43 150 0
|
88
|
+
45 0 0
|
89
|
+
46 32 0
|
90
|
+
47 104 0
|
91
|
+
48 132 0
|
92
|
+
50 150 0
|
93
|
+
NR 2 29
|
94
|
+
2 0 0
|
95
|
+
6 0 24
|
96
|
+
7 0 24
|
97
|
+
8 0 6
|
98
|
+
9 6 0
|
99
|
+
13 0 24
|
100
|
+
14 0 24
|
101
|
+
15 0 6
|
102
|
+
16 6 0
|
103
|
+
20 0 24
|
104
|
+
21 0 24
|
105
|
+
22 0 6
|
106
|
+
23 6 0
|
107
|
+
27 0 24
|
108
|
+
28 0 24
|
109
|
+
29 0 6
|
110
|
+
30 6 0
|
111
|
+
34 0 24
|
112
|
+
35 0 24
|
113
|
+
36 0 6
|
114
|
+
37 6 0
|
115
|
+
41 0 24
|
116
|
+
42 0 24
|
117
|
+
43 0 6
|
118
|
+
44 6 0
|
119
|
+
48 0 24
|
120
|
+
49 0 24
|
121
|
+
50 0 6
|
122
|
+
51 6 0
|
123
|
+
NR 3 7
|
124
|
+
7 0 0
|
125
|
+
14 0 0
|
126
|
+
21 0 0
|
127
|
+
28 0 0
|
128
|
+
35 0 0
|
129
|
+
42 0 0
|
130
|
+
49 0 0
|