evosynth 0.1.0

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Files changed (390) hide show
  1. data/INSTALL +74 -0
  2. data/LICENSE +22 -0
  3. data/README +57 -0
  4. data/Rakefile +132 -0
  5. data/TODO +88 -0
  6. data/docs/FEATURES +111 -0
  7. data/docs/rdoc/classes/EvoSynth.html +2643 -0
  8. data/docs/rdoc/classes/EvoSynth/Adjustments.html +119 -0
  9. data/docs/rdoc/classes/EvoSynth/Adjustments/AdaptiveAdjustment.html +264 -0
  10. data/docs/rdoc/classes/EvoSynth/Adjustments/PredifinedAdjustment.html +235 -0
  11. data/docs/rdoc/classes/EvoSynth/ArrayGenome.html +313 -0
  12. data/docs/rdoc/classes/EvoSynth/BinaryGenome.html +518 -0
  13. data/docs/rdoc/classes/EvoSynth/Decoder.html +286 -0
  14. data/docs/rdoc/classes/EvoSynth/Evaluator.html +466 -0
  15. data/docs/rdoc/classes/EvoSynth/Evolvers.html +469 -0
  16. data/docs/rdoc/classes/EvoSynth/Evolvers/AdaptiveES.html +448 -0
  17. data/docs/rdoc/classes/EvoSynth/Evolvers/BalancedCoevolutionary.html +439 -0
  18. data/docs/rdoc/classes/EvoSynth/Evolvers/DerandomizedES.html +450 -0
  19. data/docs/rdoc/classes/EvoSynth/Evolvers/Evolver.html +125 -0
  20. data/docs/rdoc/classes/EvoSynth/Evolvers/GeneticAlgorithm.html +467 -0
  21. data/docs/rdoc/classes/EvoSynth/Evolvers/Hillclimber.html +343 -0
  22. data/docs/rdoc/classes/EvoSynth/Evolvers/LocalSearch.html +422 -0
  23. data/docs/rdoc/classes/EvoSynth/Evolvers/LocalSearch/GreatDelugeAcceptance.html +287 -0
  24. data/docs/rdoc/classes/EvoSynth/Evolvers/LocalSearch/HillclimberAcceptance.html +197 -0
  25. data/docs/rdoc/classes/EvoSynth/Evolvers/LocalSearch/RecordToRecordTravelAcceptance.html +296 -0
  26. data/docs/rdoc/classes/EvoSynth/Evolvers/LocalSearch/SimulatedAnnealingAcceptance.html +286 -0
  27. data/docs/rdoc/classes/EvoSynth/Evolvers/LocalSearch/ThresholdAcceptance.html +287 -0
  28. data/docs/rdoc/classes/EvoSynth/Evolvers/MemeticAlgorithm.html +441 -0
  29. data/docs/rdoc/classes/EvoSynth/Evolvers/PopulationHillclimber.html +375 -0
  30. data/docs/rdoc/classes/EvoSynth/Evolvers/ProfileUsingEvolver.html +205 -0
  31. data/docs/rdoc/classes/EvoSynth/Evolvers/RoundRobinCoevolutionary.html +383 -0
  32. data/docs/rdoc/classes/EvoSynth/Evolvers/RunnableEvolver.html +279 -0
  33. data/docs/rdoc/classes/EvoSynth/Evolvers/RunnableEvolver/Goal.html +193 -0
  34. data/docs/rdoc/classes/EvoSynth/Evolvers/SelfAdaptiveES.html +394 -0
  35. data/docs/rdoc/classes/EvoSynth/Evolvers/SteadyStateGA.html +390 -0
  36. data/docs/rdoc/classes/EvoSynth/GlobalRecombinations.html +119 -0
  37. data/docs/rdoc/classes/EvoSynth/GlobalRecombinations/GlobalArithmeticCrossover.html +204 -0
  38. data/docs/rdoc/classes/EvoSynth/GlobalRecombinations/GlobalUniformCrossover.html +203 -0
  39. data/docs/rdoc/classes/EvoSynth/Individual.html +561 -0
  40. data/docs/rdoc/classes/EvoSynth/MaximizingIndividual.html +266 -0
  41. data/docs/rdoc/classes/EvoSynth/MetaOperators.html +149 -0
  42. data/docs/rdoc/classes/EvoSynth/MetaOperators/ConditionalCombinedOperator.html +278 -0
  43. data/docs/rdoc/classes/EvoSynth/MetaOperators/ProportionalCombinedOperator.html +285 -0
  44. data/docs/rdoc/classes/EvoSynth/MetaOperators/SequentialCombinedOperator.html +290 -0
  45. data/docs/rdoc/classes/EvoSynth/MinimizingIndividual.html +266 -0
  46. data/docs/rdoc/classes/EvoSynth/Mutations.html +251 -0
  47. data/docs/rdoc/classes/EvoSynth/Mutations/BinaryMutation.html +336 -0
  48. data/docs/rdoc/classes/EvoSynth/Mutations/EfficientBinaryMutation.html +345 -0
  49. data/docs/rdoc/classes/EvoSynth/Mutations/ExchangeMutation.html +320 -0
  50. data/docs/rdoc/classes/EvoSynth/Mutations/Functions.html +160 -0
  51. data/docs/rdoc/classes/EvoSynth/Mutations/GaussMutation.html +311 -0
  52. data/docs/rdoc/classes/EvoSynth/Mutations/Identity.html +220 -0
  53. data/docs/rdoc/classes/EvoSynth/Mutations/InversionMutation.html +231 -0
  54. data/docs/rdoc/classes/EvoSynth/Mutations/MixingMutation.html +233 -0
  55. data/docs/rdoc/classes/EvoSynth/Mutations/OneGeneFlipping.html +295 -0
  56. data/docs/rdoc/classes/EvoSynth/Mutations/SelfAdaptiveGaussMutation.html +347 -0
  57. data/docs/rdoc/classes/EvoSynth/Mutations/ShiftingMutation.html +229 -0
  58. data/docs/rdoc/classes/EvoSynth/Mutations/UniformRealMutation.html +264 -0
  59. data/docs/rdoc/classes/EvoSynth/Output.html +212 -0
  60. data/docs/rdoc/classes/EvoSynth/Output/CSVExporter.html +211 -0
  61. data/docs/rdoc/classes/EvoSynth/Output/ConsoleWriter.html +194 -0
  62. data/docs/rdoc/classes/EvoSynth/Output/GnuPlotExporter.html +235 -0
  63. data/docs/rdoc/classes/EvoSynth/Output/GruffExporter.html +219 -0
  64. data/docs/rdoc/classes/EvoSynth/Output/Logger.html +345 -0
  65. data/docs/rdoc/classes/EvoSynth/Population.html +430 -0
  66. data/docs/rdoc/classes/EvoSynth/Problems.html +159 -0
  67. data/docs/rdoc/classes/EvoSynth/Problems/BinaryBenchmarkFuntions.html +258 -0
  68. data/docs/rdoc/classes/EvoSynth/Problems/FloatBenchmarkFuntions.html +406 -0
  69. data/docs/rdoc/classes/EvoSynth/Problems/GraphColouring.html +265 -0
  70. data/docs/rdoc/classes/EvoSynth/Problems/TSP.html +327 -0
  71. data/docs/rdoc/classes/EvoSynth/Profile.html +324 -0
  72. data/docs/rdoc/classes/EvoSynth/Recombinations.html +251 -0
  73. data/docs/rdoc/classes/EvoSynth/Recombinations/ArithmeticCrossover.html +286 -0
  74. data/docs/rdoc/classes/EvoSynth/Recombinations/EdgeRecombination.html +203 -0
  75. data/docs/rdoc/classes/EvoSynth/Recombinations/Identity.html +192 -0
  76. data/docs/rdoc/classes/EvoSynth/Recombinations/KPointCrossover.html +286 -0
  77. data/docs/rdoc/classes/EvoSynth/Recombinations/OnePointCrossover.html +211 -0
  78. data/docs/rdoc/classes/EvoSynth/Recombinations/OrderedRecombination.html +206 -0
  79. data/docs/rdoc/classes/EvoSynth/Recombinations/PartiallyMappedCrossover.html +206 -0
  80. data/docs/rdoc/classes/EvoSynth/Recombinations/UniformCrossover.html +208 -0
  81. data/docs/rdoc/classes/EvoSynth/Selections.html +174 -0
  82. data/docs/rdoc/classes/EvoSynth/Selections/FitnessProportionalSelection.html +206 -0
  83. data/docs/rdoc/classes/EvoSynth/Selections/Identity.html +200 -0
  84. data/docs/rdoc/classes/EvoSynth/Selections/NStageTournamentSelection.html +273 -0
  85. data/docs/rdoc/classes/EvoSynth/Selections/RandomSelection.html +192 -0
  86. data/docs/rdoc/classes/EvoSynth/Selections/RouletteWheelSelection.html +212 -0
  87. data/docs/rdoc/classes/EvoSynth/Selections/SelectBest.html +206 -0
  88. data/docs/rdoc/classes/EvoSynth/Selections/TournamentSelection.html +274 -0
  89. data/docs/rdoc/classes/Examples.html +268 -0
  90. data/docs/rdoc/classes/Examples/Ants.html +198 -0
  91. data/docs/rdoc/classes/Examples/Ants/AntMutation.html +381 -0
  92. data/docs/rdoc/classes/Examples/Ants/Pheromon.html +256 -0
  93. data/docs/rdoc/classes/Examples/CCGAExample.html +305 -0
  94. data/docs/rdoc/classes/Examples/CCGAExample/CCGA2BenchmarkEvaluator.html +165 -0
  95. data/docs/rdoc/classes/Examples/CCGAExample/CCGABenchmarkEvaluator.html +242 -0
  96. data/docs/rdoc/classes/Examples/CCGAExample/CCGAIndividual.html +181 -0
  97. data/docs/rdoc/classes/Examples/CMBExample.html +215 -0
  98. data/docs/rdoc/classes/Examples/CMBExample/CMBEvaluator.html +212 -0
  99. data/docs/rdoc/classes/Examples/EsExample.html +270 -0
  100. data/docs/rdoc/classes/Examples/EsExample/BenchmarkEvaluator.html +162 -0
  101. data/docs/rdoc/classes/Examples/Exporter.html +208 -0
  102. data/docs/rdoc/classes/Examples/Exporter/ExporterEvaluator.html +196 -0
  103. data/docs/rdoc/classes/Examples/GraphColouring.html +199 -0
  104. data/docs/rdoc/classes/Examples/Hacking.html +147 -0
  105. data/docs/rdoc/classes/Examples/Hacking/HackingEvaluator.html +169 -0
  106. data/docs/rdoc/classes/Examples/LocalSearch.html +294 -0
  107. data/docs/rdoc/classes/Examples/LocalSearch/LocalSearchEvaluator.html +198 -0
  108. data/docs/rdoc/classes/Examples/MaxOnes.html +187 -0
  109. data/docs/rdoc/classes/Examples/MaxOnes/MaxOnesEvaluator.html +170 -0
  110. data/docs/rdoc/classes/Examples/Partitionproblem.html +201 -0
  111. data/docs/rdoc/classes/Examples/Partitionproblem/PartitionEvaluator.html +164 -0
  112. data/docs/rdoc/classes/Examples/Partitionproblem/PartitionIndividual.html +334 -0
  113. data/docs/rdoc/classes/Examples/Partitionproblem/PartitionMutation.html +199 -0
  114. data/docs/rdoc/classes/Examples/Partitionproblem/Testdata.html +294 -0
  115. data/docs/rdoc/classes/Examples/SPk.html +139 -0
  116. data/docs/rdoc/classes/Examples/SPk/SPkFitnessEvaluator.html +299 -0
  117. data/docs/rdoc/classes/Examples/TSP.html +187 -0
  118. data/docs/rdoc/created.rid +1 -0
  119. data/docs/rdoc/files/INSTALL.html +253 -0
  120. data/docs/rdoc/files/LICENSE.html +119 -0
  121. data/docs/rdoc/files/README.html +235 -0
  122. data/docs/rdoc/files/docs/FEATURES.html +428 -0
  123. data/docs/rdoc/files/examples/ants_rb.html +133 -0
  124. data/docs/rdoc/files/examples/ccga_example_rb.html +129 -0
  125. data/docs/rdoc/files/examples/cmb_example_rb.html +129 -0
  126. data/docs/rdoc/files/examples/evolution_strategies_rb.html +129 -0
  127. data/docs/rdoc/files/examples/exporter_rb.html +129 -0
  128. data/docs/rdoc/files/examples/graph_colouring_rb.html +129 -0
  129. data/docs/rdoc/files/examples/hacking_rb.html +129 -0
  130. data/docs/rdoc/files/examples/local_search_rb.html +129 -0
  131. data/docs/rdoc/files/examples/max_ones_rb.html +129 -0
  132. data/docs/rdoc/files/examples/partition_rb.html +131 -0
  133. data/docs/rdoc/files/examples/spk_rb.html +129 -0
  134. data/docs/rdoc/files/examples/tsp_rb.html +131 -0
  135. data/docs/rdoc/files/lib/evosynth/core/array_genome_rb.html +119 -0
  136. data/docs/rdoc/files/lib/evosynth/core/binary_genome_rb.html +119 -0
  137. data/docs/rdoc/files/lib/evosynth/core/evaluator_rb.html +129 -0
  138. data/docs/rdoc/files/lib/evosynth/core/individual_rb.html +119 -0
  139. data/docs/rdoc/files/lib/evosynth/core/maximizing_individual_rb.html +119 -0
  140. data/docs/rdoc/files/lib/evosynth/core/minimizing_individual_rb.html +119 -0
  141. data/docs/rdoc/files/lib/evosynth/core/population_rb.html +119 -0
  142. data/docs/rdoc/files/lib/evosynth/core/profile_rb.html +119 -0
  143. data/docs/rdoc/files/lib/evosynth/core/randomizer_rb.html +119 -0
  144. data/docs/rdoc/files/lib/evosynth/core_rb.html +145 -0
  145. data/docs/rdoc/files/lib/evosynth/decoder/binary_to_real_rb.html +119 -0
  146. data/docs/rdoc/files/lib/evosynth/decoder/gray_rb.html +119 -0
  147. data/docs/rdoc/files/lib/evosynth/decoder_rb.html +131 -0
  148. data/docs/rdoc/files/lib/evosynth/evolvers/basic/genetic_algorithm_rb.html +119 -0
  149. data/docs/rdoc/files/lib/evosynth/evolvers/basic/hillclimber_rb.html +119 -0
  150. data/docs/rdoc/files/lib/evosynth/evolvers/basic/memetic_algorithm_rb.html +119 -0
  151. data/docs/rdoc/files/lib/evosynth/evolvers/basic/population_hillclimber_rb.html +119 -0
  152. data/docs/rdoc/files/lib/evosynth/evolvers/basic/steady_state_ga_rb.html +119 -0
  153. data/docs/rdoc/files/lib/evosynth/evolvers/coevolutionary/balanced_coevolutionary_rb.html +119 -0
  154. data/docs/rdoc/files/lib/evosynth/evolvers/coevolutionary/round_robin_coevolutionary_rb.html +119 -0
  155. data/docs/rdoc/files/lib/evosynth/evolvers/elitism_rb.html +119 -0
  156. data/docs/rdoc/files/lib/evosynth/evolvers/evolution_strategies/adaptive_es_rb.html +129 -0
  157. data/docs/rdoc/files/lib/evosynth/evolvers/evolution_strategies/derandomized_es_rb.html +129 -0
  158. data/docs/rdoc/files/lib/evosynth/evolvers/evolution_strategies/selfadaptive_es_rb.html +119 -0
  159. data/docs/rdoc/files/lib/evosynth/evolvers/evolver_rb.html +131 -0
  160. data/docs/rdoc/files/lib/evosynth/evolvers/local_search/acceptance_great_deluge_rb.html +119 -0
  161. data/docs/rdoc/files/lib/evosynth/evolvers/local_search/acceptance_hillclimber_rb.html +119 -0
  162. data/docs/rdoc/files/lib/evosynth/evolvers/local_search/acceptance_record_to_record_rb.html +119 -0
  163. data/docs/rdoc/files/lib/evosynth/evolvers/local_search/acceptance_simulated_annealing_rb.html +119 -0
  164. data/docs/rdoc/files/lib/evosynth/evolvers/local_search/acceptance_threshold_rb.html +119 -0
  165. data/docs/rdoc/files/lib/evosynth/evolvers/local_search/local_search_rb.html +137 -0
  166. data/docs/rdoc/files/lib/evosynth/evolvers/profile_using_evolver_rb.html +119 -0
  167. data/docs/rdoc/files/lib/evosynth/evolvers/runnable_evolver_rb.html +129 -0
  168. data/docs/rdoc/files/lib/evosynth/evolvers_rb.html +153 -0
  169. data/docs/rdoc/files/lib/evosynth/operators/adjustments/adaptive_adjustment_rb.html +119 -0
  170. data/docs/rdoc/files/lib/evosynth/operators/adjustments/predefined_adjustment_rb.html +119 -0
  171. data/docs/rdoc/files/lib/evosynth/operators/adjustments_rb.html +131 -0
  172. data/docs/rdoc/files/lib/evosynth/operators/global_recombinations/global_arithmetic_crossover_rb.html +119 -0
  173. data/docs/rdoc/files/lib/evosynth/operators/global_recombinations/global_uniform_crossover_rb.html +119 -0
  174. data/docs/rdoc/files/lib/evosynth/operators/global_recombinations_rb.html +131 -0
  175. data/docs/rdoc/files/lib/evosynth/operators/meta_operators/conditional_combined_operator_rb.html +119 -0
  176. data/docs/rdoc/files/lib/evosynth/operators/meta_operators/proportional_combined_operator_rb.html +119 -0
  177. data/docs/rdoc/files/lib/evosynth/operators/meta_operators/sequential_combined_operator_rb.html +119 -0
  178. data/docs/rdoc/files/lib/evosynth/operators/meta_operators_rb.html +133 -0
  179. data/docs/rdoc/files/lib/evosynth/operators/mutations/binary_mutation_rb.html +119 -0
  180. data/docs/rdoc/files/lib/evosynth/operators/mutations/efficient_binary_mutation_rb.html +119 -0
  181. data/docs/rdoc/files/lib/evosynth/operators/mutations/exchange_mutation_rb.html +119 -0
  182. data/docs/rdoc/files/lib/evosynth/operators/mutations/flip_functions_rb.html +119 -0
  183. data/docs/rdoc/files/lib/evosynth/operators/mutations/gauss_mutation_rb.html +119 -0
  184. data/docs/rdoc/files/lib/evosynth/operators/mutations/identity_rb.html +119 -0
  185. data/docs/rdoc/files/lib/evosynth/operators/mutations/inversion_mutation_rb.html +119 -0
  186. data/docs/rdoc/files/lib/evosynth/operators/mutations/mixing_mutation_rb.html +119 -0
  187. data/docs/rdoc/files/lib/evosynth/operators/mutations/one_gene_flipping_rb.html +119 -0
  188. data/docs/rdoc/files/lib/evosynth/operators/mutations/self_adaptive_gauss_mutation_rb.html +119 -0
  189. data/docs/rdoc/files/lib/evosynth/operators/mutations/shifting_mutation_rb.html +119 -0
  190. data/docs/rdoc/files/lib/evosynth/operators/mutations/uniform_real_mutation_rb.html +119 -0
  191. data/docs/rdoc/files/lib/evosynth/operators/mutations_rb.html +151 -0
  192. data/docs/rdoc/files/lib/evosynth/operators/recombinations/arithmetic_crossover_rb.html +119 -0
  193. data/docs/rdoc/files/lib/evosynth/operators/recombinations/edge_recombination_rb.html +129 -0
  194. data/docs/rdoc/files/lib/evosynth/operators/recombinations/identity_rb.html +119 -0
  195. data/docs/rdoc/files/lib/evosynth/operators/recombinations/k_point_crossover_rb.html +119 -0
  196. data/docs/rdoc/files/lib/evosynth/operators/recombinations/one_point_crossover_rb.html +119 -0
  197. data/docs/rdoc/files/lib/evosynth/operators/recombinations/ordered_recombination_rb.html +129 -0
  198. data/docs/rdoc/files/lib/evosynth/operators/recombinations/partially_mapped_crossover_rb.html +129 -0
  199. data/docs/rdoc/files/lib/evosynth/operators/recombinations/uniform_crossover_rb.html +119 -0
  200. data/docs/rdoc/files/lib/evosynth/operators/recombinations_rb.html +143 -0
  201. data/docs/rdoc/files/lib/evosynth/operators/selections/best_selection_rb.html +119 -0
  202. data/docs/rdoc/files/lib/evosynth/operators/selections/fitness_proportional_selection_rb.html +119 -0
  203. data/docs/rdoc/files/lib/evosynth/operators/selections/identity_rb.html +119 -0
  204. data/docs/rdoc/files/lib/evosynth/operators/selections/n_stage_tournament_selection_rb.html +119 -0
  205. data/docs/rdoc/files/lib/evosynth/operators/selections/random_selection_rb.html +119 -0
  206. data/docs/rdoc/files/lib/evosynth/operators/selections/roulette_wheel_selection_rb.html +119 -0
  207. data/docs/rdoc/files/lib/evosynth/operators/selections/tournament_selection_rb.html +119 -0
  208. data/docs/rdoc/files/lib/evosynth/operators/selections_rb.html +141 -0
  209. data/docs/rdoc/files/lib/evosynth/operators_rb.html +139 -0
  210. data/docs/rdoc/files/lib/evosynth/output/console_writer_rb.html +129 -0
  211. data/docs/rdoc/files/lib/evosynth/output/exporter/csv_exporter_rb.html +129 -0
  212. data/docs/rdoc/files/lib/evosynth/output/exporter/gnuplot_exporter_rb.html +131 -0
  213. data/docs/rdoc/files/lib/evosynth/output/exporter/gruff_exporter_rb.html +131 -0
  214. data/docs/rdoc/files/lib/evosynth/output/exporter_rb.html +133 -0
  215. data/docs/rdoc/files/lib/evosynth/output/factory_rb.html +129 -0
  216. data/docs/rdoc/files/lib/evosynth/output/logger_rb.html +119 -0
  217. data/docs/rdoc/files/lib/evosynth/output_rb.html +135 -0
  218. data/docs/rdoc/files/lib/evosynth/problems/binary_benchmark_functions_rb.html +119 -0
  219. data/docs/rdoc/files/lib/evosynth/problems/float_benchmark_functions_rb.html +1630 -0
  220. data/docs/rdoc/files/lib/evosynth/problems/graph_colouring_rb.html +129 -0
  221. data/docs/rdoc/files/lib/evosynth/problems/tsp_rb.html +129 -0
  222. data/docs/rdoc/files/lib/evosynth/problems_rb.html +135 -0
  223. data/docs/rdoc/files/lib/evosynth_rb.html +139 -0
  224. data/docs/rdoc/fr_class_index.html +245 -0
  225. data/docs/rdoc/fr_file_index.html +233 -0
  226. data/docs/rdoc/fr_method_index.html +661 -0
  227. data/docs/rdoc/index.html +21 -0
  228. data/docs/rdoc/rdoc-style.css +299 -0
  229. data/examples/ants.rb +237 -0
  230. data/examples/ccga_example.rb +150 -0
  231. data/examples/cmb_example.rb +117 -0
  232. data/examples/evolution_strategies.rb +84 -0
  233. data/examples/exporter.rb +90 -0
  234. data/examples/graph_colouring.rb +72 -0
  235. data/examples/hacking.rb +62 -0
  236. data/examples/local_search.rb +109 -0
  237. data/examples/max_ones.rb +83 -0
  238. data/examples/partition.rb +172 -0
  239. data/examples/spk.rb +106 -0
  240. data/examples/tsp.rb +83 -0
  241. data/lib/evosynth.rb +32 -0
  242. data/lib/evosynth/core.rb +33 -0
  243. data/lib/evosynth/core/array_genome.rb +77 -0
  244. data/lib/evosynth/core/binary_genome.rb +156 -0
  245. data/lib/evosynth/core/evaluator.rb +109 -0
  246. data/lib/evosynth/core/individual.rb +92 -0
  247. data/lib/evosynth/core/maximizing_individual.rb +71 -0
  248. data/lib/evosynth/core/minimizing_individual.rb +71 -0
  249. data/lib/evosynth/core/population.rb +120 -0
  250. data/lib/evosynth/core/profile.rb +110 -0
  251. data/lib/evosynth/core/randomizer.rb +73 -0
  252. data/lib/evosynth/decoder.rb +33 -0
  253. data/lib/evosynth/decoder/binary_to_real.rb +57 -0
  254. data/lib/evosynth/decoder/gray.rb +54 -0
  255. data/lib/evosynth/evolvers.rb +41 -0
  256. data/lib/evosynth/evolvers/basic/genetic_algorithm.rb +92 -0
  257. data/lib/evosynth/evolvers/basic/hillclimber.rb +64 -0
  258. data/lib/evosynth/evolvers/basic/memetic_algorithm.rb +111 -0
  259. data/lib/evosynth/evolvers/basic/population_hillclimber.rb +69 -0
  260. data/lib/evosynth/evolvers/basic/steady_state_ga.rb +85 -0
  261. data/lib/evosynth/evolvers/coevolutionary/balanced_coevolutionary.rb +125 -0
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+ <head>
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+ <title>Class: EvoSynth::Evolvers::LocalSearch::ThresholdAcceptance [EvoSynth Documentation]</title>
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+ <td><strong>Class</strong></td>
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+ <td class="class-name-in-header">EvoSynth::Evolvers::LocalSearch::ThresholdAcceptance</td>
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+ <tr class="top-aligned-row">
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+ <td><strong>In:</strong></td>
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+ <a href="../../../../files/lib/evosynth/evolvers/local_search/acceptance_threshold_rb.html">
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+ lib/evosynth/evolvers/local_search/acceptance_threshold.rb
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+ Object
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+ </td>
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+ </tr>
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+ AKZEPTANZ-TA (Weicker Page 157)
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+ </div>
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+ <h3 class="section-bar">Methods</h3>
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+ <a href="#M000155">accepts</a>&nbsp;&nbsp;
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+ <table summary="Constants">
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+ <tr class="top-aligned-row context-row">
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+ <td class="context-item-name">DEFAULT_START_TEMP</td>
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+ <td>=</td>
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+ <td class="context-item-value">Float::MAX</td>
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+
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+ </tr>
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+
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+ <tr class="top-aligned-row context-row">
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+ <td class="context-item-name">DEFAULT_ALPHA</td>
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+ <td>=</td>
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+ <td class="context-item-value">0.9</td>
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+
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+ </tr>
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+ </div>
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+ <h3 class="section-bar">Attributes</h3>
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+ <div class="name-list">
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+ <table>
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+ <tr class="top-aligned-row context-row">
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+ <td class="context-item-name">alpha</td>
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+ <td class="context-item-value">&nbsp;[RW]&nbsp;</td>
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+
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+ <td class="context-item-desc"></td>
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+ </tr>
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+ <tr class="top-aligned-row context-row">
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+ <td class="context-item-name">temperature</td>
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+
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+ <td class="context-item-value">&nbsp;[RW]&nbsp;</td>
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+ <td class="context-item-desc"></td>
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+ </tr>
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+ </table>
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+ </div>
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+ <div id="methods">
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+ <a href="#M000154" class="method-signature">
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+ <span class="method-name">new</span><span class="method-args">(start_temp = DEFAULT_START_TEMP, alpha = DEFAULT_ALPHA)</span>
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+ </a>
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+ onclick="toggleCode('M000154-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000154-source">
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+ <pre>
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+ <span class="ruby-comment cmt"># File lib/evosynth/evolvers/local_search/acceptance_threshold.rb, line 38</span>
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+ 38: <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">start_temp</span> = <span class="ruby-constant">DEFAULT_START_TEMP</span>, <span class="ruby-identifier">alpha</span> = <span class="ruby-constant">DEFAULT_ALPHA</span>)
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+ 39: <span class="ruby-ivar">@temperature</span> = <span class="ruby-identifier">start_temp</span>
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+ 40: <span class="ruby-ivar">@alpha</span> = <span class="ruby-identifier">alpha</span>
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+ 41: <span class="ruby-keyword kw">end</span>
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+ </pre>
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+ <div class="method-source-code" id="M000155-source">
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+ <pre>
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+ <span class="ruby-comment cmt"># File lib/evosynth/evolvers/local_search/acceptance_threshold.rb, line 43</span>
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+ 43: <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">accepts</span>(<span class="ruby-identifier">parent</span>, <span class="ruby-identifier">child</span>, <span class="ruby-identifier">generation</span>)
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+ 44: <span class="ruby-identifier">threshold</span> = <span class="ruby-constant">Math</span>.<span class="ruby-identifier">sqrt</span>( (<span class="ruby-identifier">child</span>.<span class="ruby-identifier">fitness</span> <span class="ruby-operator">-</span> <span class="ruby-identifier">parent</span>.<span class="ruby-identifier">fitness</span>)<span class="ruby-operator">**</span><span class="ruby-value">2</span> )
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+ 45: <span class="ruby-identifier">accepted</span> = <span class="ruby-identifier">child</span> <span class="ruby-operator">&gt;</span> <span class="ruby-identifier">parent</span> <span class="ruby-operator">||</span> <span class="ruby-identifier">threshold</span> <span class="ruby-operator">&lt;=</span> <span class="ruby-ivar">@temperature</span>
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+ 46: <span class="ruby-ivar">@temperature</span> <span class="ruby-operator">*=</span> <span class="ruby-ivar">@alpha</span>
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+ 47:
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+ 48: <span class="ruby-identifier">accepted</span>
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+ 49: <span class="ruby-keyword kw">end</span>
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+ </pre>
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+ onclick="toggleCode('M000156-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000156-source">
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+ <pre>
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+ <span class="ruby-comment cmt"># File lib/evosynth/evolvers/local_search/acceptance_threshold.rb, line 51</span>
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+ 51: <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">to_s</span>
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+ 52: <span class="ruby-value str">&quot;Threshold Acceptance&quot;</span>
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+ 53: <span class="ruby-keyword kw">end</span>
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+ </pre>
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+ elemStyle.display = "block"
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+ } else {
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+ elemStyle.display = "none"
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+ }
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+
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+ return true;
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+ }
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+
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+ // Make codeblocks hidden by default
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+ document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }<\/style>" )
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+
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+ // ]]>
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+ </script>
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+
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+ </head>
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+ <body>
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+
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+
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+ <div id="classHeader">
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+ <table class="header-table">
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+ <tr class="top-aligned-row">
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+ <td><strong>Class</strong></td>
49
+ <td class="class-name-in-header">EvoSynth::Evolvers::MemeticAlgorithm</td>
50
+ </tr>
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+ <tr class="top-aligned-row">
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+ <td><strong>In:</strong></td>
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+ <td>
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+
55
+
56
+ <a href="../../../files/lib/evosynth/evolvers/basic/memetic_algorithm_rb.html">
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+
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+ lib/evosynth/evolvers/basic/memetic_algorithm.rb
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+
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+ </a>
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+
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+
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+ <br />
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+
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+ </td>
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+ </tr>
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+
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+
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+ <tr class="top-aligned-row">
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+ <td><strong>Parent:</strong></td>
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+ <td>
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+
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+ Object
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+
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+ </td>
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+ </tr>
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+
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+ </table>
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+ </div>
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+ <!-- banner header -->
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+
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+ <div id="bodyContent">
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+
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+ <div id="contextContent">
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+
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+ <div id="description">
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+ <p>
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+ MEMETISCHER-ALGORITHMUS (Weicker Page 165) see also: <a
89
+ href="http://en.wikipedia.org/wiki/Memetic_algorithm">en.wikipedia.org/wiki/Memetic_algorithm</a>
90
+ for later improvments
91
+ </p>
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+
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+ </div>
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+
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+ </div>
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+
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+
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+ <div id="method-list">
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+ <h3 class="section-bar">Methods</h3>
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+
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+ <div class="name-list">
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+
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+ <a href="#M000191">best_solution</a>&nbsp;&nbsp;
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+
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+ <a href="#M000189">new</a>&nbsp;&nbsp;
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+
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+ <a href="#M000194">next_generation</a>&nbsp;&nbsp;
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+
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+ <a href="#M000193">return_result</a>&nbsp;&nbsp;
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+
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+ <a href="#M000190">to_s</a>&nbsp;&nbsp;
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+
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+ <a href="#M000192">worst_solution</a>&nbsp;&nbsp;
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+
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+ </div>
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+ </div>
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+
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+ </div>
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+
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+ <!-- if includes -->
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+
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+ <div id="includes">
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+ <h3 class="section-bar">Included Modules</h3>
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+
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+ <div id="includes-list">
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+
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+ <span class="include-name"><a href="Evolver.html">EvoSynth::Evolvers::Evolver</a></span>
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+
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+ </div>
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+ </div>
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+
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+ <div id="section">
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+
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+ <div id="constants-list">
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+ <h3 class="section-bar">Constants</h3>
136
+
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+ <div class="name-list">
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+ <table summary="Constants">
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+
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+ <tr class="top-aligned-row context-row">
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+ <td class="context-item-name">DEFAULT_CHILD_FACTOR</td>
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+ <td>=</td>
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+ <td class="context-item-value">0.5</td>
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+
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+ </tr>
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+
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+ <tr class="top-aligned-row context-row">
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+ <td class="context-item-name">DEFAULT_RECOMBINATION_PROBABILITY</td>
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+ <td>=</td>
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+ <td class="context-item-value">1.0</td>
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+
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+ </tr>
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+
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+ <tr class="top-aligned-row context-row">
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+ <td class="context-item-name">DEFAULT_RECOMBINATION</td>
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+ <td>=</td>
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+ <td class="context-item-value">EvoSynth::Recombinations::KPointCrossover.new(2)</td>
158
+
159
+ </tr>
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+
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+ <tr class="top-aligned-row context-row">
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+ <td class="context-item-name">DEFAULT_INDIVIDUAL_LEARNING_GOAL</td>
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+ <td>=</td>
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+ <td class="context-item-value">-&gt;(gen, best) { gen &gt;= 10 }</td>
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+
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+ </tr>
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+
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+ <tr class="top-aligned-row context-row">
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+ <td class="context-item-name">DEFAULT_INDIVIDUAL_LEARNING_PROBABILITY</td>
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+ <td>=</td>
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+ <td class="context-item-value">0.75</td>
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+
173
+ </tr>
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+
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+ <tr class="top-aligned-row context-row">
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+ <td class="context-item-name">DEFAULT_SELECTION</td>
177
+ <td>=</td>
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+ <td class="context-item-value">EvoSynth::Selections::FitnessProportionalSelection.new</td>
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+
180
+ </tr>
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+
182
+ <tr class="top-aligned-row context-row">
183
+ <td class="context-item-name">DEFAULT_SUBEVOLVER_CREATOR</td>
184
+ <td>=</td>
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+ <td class="context-item-value">-&gt;(profile) { EvoSynth::Evolvers::LocalSearch.new(profile) }</td>
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+
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+ </tr>
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+
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+ </table>
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+ </div>
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+ </div>
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+
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+
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+
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+
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+ <!-- if method_list -->
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+
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+ <div id="methods">
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+
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+ <h3 class="section-bar">Public Class methods</h3>
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+
202
+
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+ <div id="method-M000189" class="method-detail">
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+ <a name="M000189"></a>
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+
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+ <div class="method-heading">
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+
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+ <a href="#M000189" class="method-signature">
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+
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+ <span class="method-name">new</span><span class="method-args">(profile)</span>
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+
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+ </a>
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+
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+ </div>
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+
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+ <div class="method-description">
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+
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+ <p><a class="source-toggle" href="#"
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+ onclick="toggleCode('M000189-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000189-source">
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+ <pre>
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+ <span class="ruby-comment cmt"># File lib/evosynth/evolvers/basic/memetic_algorithm.rb, line 42</span>
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+ 42: <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">profile</span>)
224
+ 43: <span class="ruby-identifier">init_profile</span> <span class="ruby-identifier">:population</span>,
225
+ 44: <span class="ruby-identifier">:evaluator</span>,
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+ 45: <span class="ruby-identifier">:mutation</span>,
227
+ 46: <span class="ruby-identifier">:recombination</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-constant">DEFAULT_RECOMBINATION</span>,
228
+ 47: <span class="ruby-identifier">:parent_selection</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-constant">DEFAULT_SELECTION</span>,
229
+ 48: <span class="ruby-identifier">:enviromental_selection</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-constant">DEFAULT_SELECTION</span>,
230
+ 49: <span class="ruby-identifier">:child_factor</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-constant">DEFAULT_CHILD_FACTOR</span>,
231
+ 50: <span class="ruby-identifier">:recombination_probability</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-constant">DEFAULT_RECOMBINATION_PROBABILITY</span>,
232
+ 51: <span class="ruby-identifier">:subevolver_creator</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-constant">DEFAULT_SUBEVOLVER_CREATOR</span>,
233
+ 52: <span class="ruby-identifier">:individual_learning_goal</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-constant">DEFAULT_INDIVIDUAL_LEARNING_GOAL</span>,
234
+ 53: <span class="ruby-identifier">:individual_learning_probability</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-constant">DEFAULT_INDIVIDUAL_LEARNING_PROBABILITY</span>
235
+ 54:
236
+ 55: <span class="ruby-identifier">use_profile</span> <span class="ruby-identifier">profile</span>
237
+ 56:
238
+ 57: <span class="ruby-ivar">@population</span>.<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">individual</span><span class="ruby-operator">|</span> <span class="ruby-ivar">@evaluator</span>.<span class="ruby-identifier">calculate_and_set_initial_fitness</span>(<span class="ruby-identifier">individual</span>) }
239
+ 58: <span class="ruby-keyword kw">end</span>
240
+ </pre>
241
+ </div>
242
+
243
+ </div>
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+ </div>
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+
246
+
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+ <h3 class="section-bar">Public Instance methods</h3>
248
+
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+
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+ <div id="method-M000191" class="method-detail">
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+ <a name="M000191"></a>
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+
253
+ <div class="method-heading">
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+
255
+ <a href="#M000191" class="method-signature">
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+
257
+ <span class="method-name">best_solution</span><span class="method-args">()</span>
258
+
259
+ </a>
260
+
261
+ </div>
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+
263
+ <div class="method-description">
264
+
265
+ <p><a class="source-toggle" href="#"
266
+ onclick="toggleCode('M000191-source');return false;">[Source]</a></p>
267
+ <div class="method-source-code" id="M000191-source">
268
+ <pre>
269
+ <span class="ruby-comment cmt"># File lib/evosynth/evolvers/basic/memetic_algorithm.rb, line 64</span>
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+ 64: <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">best_solution</span>
271
+ 65: <span class="ruby-ivar">@population</span>.<span class="ruby-identifier">best</span>
272
+ 66: <span class="ruby-keyword kw">end</span>
273
+ </pre>
274
+ </div>
275
+
276
+ </div>
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+ </div>
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+
279
+
280
+ <div id="method-M000194" class="method-detail">
281
+ <a name="M000194"></a>
282
+
283
+ <div class="method-heading">
284
+
285
+ <a href="#M000194" class="method-signature">
286
+
287
+ <span class="method-name">next_generation</span><span class="method-args">()</span>
288
+
289
+ </a>
290
+
291
+ </div>
292
+
293
+ <div class="method-description">
294
+
295
+ <p><a class="source-toggle" href="#"
296
+ onclick="toggleCode('M000194-source');return false;">[Source]</a></p>
297
+ <div class="method-source-code" id="M000194-source">
298
+ <pre>
299
+ <span class="ruby-comment cmt"># File lib/evosynth/evolvers/basic/memetic_algorithm.rb, line 76</span>
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+ 76: <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">next_generation</span>
301
+ 77: <span class="ruby-identifier">selected_population</span> = <span class="ruby-ivar">@parent_selection</span>.<span class="ruby-identifier">select</span>(<span class="ruby-ivar">@population</span>, <span class="ruby-ivar">@population</span>.<span class="ruby-identifier">size</span> <span class="ruby-operator">*</span> <span class="ruby-ivar">@child_factor</span>)
302
+ 78: <span class="ruby-identifier">child_population</span> = <span class="ruby-constant">EvoSynth</span><span class="ruby-operator">::</span><span class="ruby-constant">Population</span>.<span class="ruby-identifier">new</span>
303
+ 79:
304
+ 80: <span class="ruby-identifier">selected_population</span>.<span class="ruby-identifier">each_index</span> <span class="ruby-keyword kw">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">index_one</span><span class="ruby-operator">|</span>
305
+ 81: <span class="ruby-identifier">index_two</span> = (<span class="ruby-identifier">index_one</span> <span class="ruby-operator">+</span> <span class="ruby-value">1</span>) <span class="ruby-operator">%</span> <span class="ruby-identifier">selected_population</span>.<span class="ruby-identifier">size</span>
306
+ 82:
307
+ 83: <span class="ruby-keyword kw">if</span> <span class="ruby-constant">EvoSynth</span>.<span class="ruby-identifier">rand</span> <span class="ruby-operator">&lt;</span> <span class="ruby-ivar">@recombination_probability</span>
308
+ 84: <span class="ruby-identifier">child_one</span>, <span class="ruby-identifier">child_two</span> = <span class="ruby-ivar">@recombination</span>.<span class="ruby-identifier">recombine</span>(<span class="ruby-identifier">selected_population</span>[<span class="ruby-identifier">index_one</span>], <span class="ruby-identifier">selected_population</span>[<span class="ruby-identifier">index_two</span>])
309
+ 85: <span class="ruby-keyword kw">else</span>
310
+ 86: <span class="ruby-identifier">child_one</span> = <span class="ruby-identifier">selected_population</span>[<span class="ruby-identifier">index_one</span>]
311
+ 87: <span class="ruby-identifier">child_two</span> = <span class="ruby-identifier">selected_population</span>[<span class="ruby-identifier">index_two</span>]
312
+ 88: <span class="ruby-keyword kw">end</span>
313
+ 89:
314
+ 90: <span class="ruby-identifier">child_population</span>.<span class="ruby-identifier">add</span>(<span class="ruby-ivar">@mutation</span>.<span class="ruby-identifier">mutate</span>(<span class="ruby-identifier">child_one</span>))
315
+ 91: <span class="ruby-identifier">child_population</span>.<span class="ruby-identifier">add</span>(<span class="ruby-ivar">@mutation</span>.<span class="ruby-identifier">mutate</span>(<span class="ruby-identifier">child_two</span>))
316
+ 92: <span class="ruby-keyword kw">end</span>
317
+ 93:
318
+ 94: <span class="ruby-identifier">child_population</span>.<span class="ruby-identifier">map!</span> <span class="ruby-keyword kw">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">child</span><span class="ruby-operator">|</span>
319
+ 95: <span class="ruby-keyword kw">if</span> <span class="ruby-constant">EvoSynth</span>.<span class="ruby-identifier">rand</span> <span class="ruby-operator">&lt;</span> <span class="ruby-ivar">@individual_learning_probability</span>
320
+ 96: <span class="ruby-ivar">@profile</span>.<span class="ruby-identifier">individual</span> = <span class="ruby-identifier">child</span>
321
+ 97: <span class="ruby-identifier">subevolver</span> = <span class="ruby-ivar">@subevolver_creator</span>.<span class="ruby-identifier">call</span>(<span class="ruby-ivar">@profile</span>)
322
+ 98: <span class="ruby-identifier">subevolver</span>.<span class="ruby-identifier">run_until</span> <span class="ruby-operator">&amp;</span><span class="ruby-ivar">@individual_learning_goal</span>
323
+ 99: <span class="ruby-keyword kw">else</span>
324
+ 100: <span class="ruby-identifier">child</span>
325
+ 101: <span class="ruby-keyword kw">end</span>
326
+ 102: <span class="ruby-keyword kw">end</span>
327
+ 103:
328
+ 104: <span class="ruby-identifier">child_population</span>.<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">individual</span><span class="ruby-operator">|</span> <span class="ruby-ivar">@evaluator</span>.<span class="ruby-identifier">calculate_and_set_fitness</span>(<span class="ruby-identifier">individual</span>) }
329
+ 105: <span class="ruby-ivar">@population</span> = <span class="ruby-ivar">@enviromental_selection</span>.<span class="ruby-identifier">select</span>(<span class="ruby-identifier">child_population</span>, <span class="ruby-ivar">@population</span>.<span class="ruby-identifier">size</span>)
330
+ 106: <span class="ruby-keyword kw">end</span>
331
+ </pre>
332
+ </div>
333
+
334
+ </div>
335
+ </div>
336
+
337
+
338
+ <div id="method-M000193" class="method-detail">
339
+ <a name="M000193"></a>
340
+
341
+ <div class="method-heading">
342
+
343
+ <a href="#M000193" class="method-signature">
344
+
345
+ <span class="method-name">return_result</span><span class="method-args">()</span>
346
+
347
+ </a>
348
+
349
+ </div>
350
+
351
+ <div class="method-description">
352
+
353
+ <p><a class="source-toggle" href="#"
354
+ onclick="toggleCode('M000193-source');return false;">[Source]</a></p>
355
+ <div class="method-source-code" id="M000193-source">
356
+ <pre>
357
+ <span class="ruby-comment cmt"># File lib/evosynth/evolvers/basic/memetic_algorithm.rb, line 72</span>
358
+ 72: <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">return_result</span>
359
+ 73: <span class="ruby-ivar">@population</span>
360
+ 74: <span class="ruby-keyword kw">end</span>
361
+ </pre>
362
+ </div>
363
+
364
+ </div>
365
+ </div>
366
+
367
+
368
+ <div id="method-M000190" class="method-detail">
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+ <a name="M000190"></a>
370
+
371
+ <div class="method-heading">
372
+
373
+ <a href="#M000190" class="method-signature">
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+
375
+ <span class="method-name">to_s</span><span class="method-args">()</span>
376
+
377
+ </a>
378
+
379
+ </div>
380
+
381
+ <div class="method-description">
382
+
383
+ <p><a class="source-toggle" href="#"
384
+ onclick="toggleCode('M000190-source');return false;">[Source]</a></p>
385
+ <div class="method-source-code" id="M000190-source">
386
+ <pre>
387
+ <span class="ruby-comment cmt"># File lib/evosynth/evolvers/basic/memetic_algorithm.rb, line 60</span>
388
+ 60: <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">to_s</span>
389
+ 61: <span class="ruby-value str">&quot;memetic algoritm&quot;</span>
390
+ 62: <span class="ruby-keyword kw">end</span>
391
+ </pre>
392
+ </div>
393
+
394
+ </div>
395
+ </div>
396
+
397
+
398
+ <div id="method-M000192" class="method-detail">
399
+ <a name="M000192"></a>
400
+
401
+ <div class="method-heading">
402
+
403
+ <a href="#M000192" class="method-signature">
404
+
405
+ <span class="method-name">worst_solution</span><span class="method-args">()</span>
406
+
407
+ </a>
408
+
409
+ </div>
410
+
411
+ <div class="method-description">
412
+
413
+ <p><a class="source-toggle" href="#"
414
+ onclick="toggleCode('M000192-source');return false;">[Source]</a></p>
415
+ <div class="method-source-code" id="M000192-source">
416
+ <pre>
417
+ <span class="ruby-comment cmt"># File lib/evosynth/evolvers/basic/memetic_algorithm.rb, line 68</span>
418
+ 68: <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">worst_solution</span>
419
+ 69: <span class="ruby-ivar">@population</span>.<span class="ruby-identifier">worst</span>
420
+ 70: <span class="ruby-keyword kw">end</span>
421
+ </pre>
422
+ </div>
423
+
424
+ </div>
425
+ </div>
426
+
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+
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+
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+ </div>
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+
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+
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+
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+
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+ </div>
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+
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+ <div id="validator-badges">
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+ <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
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+ </div>
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+
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+ </body>
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+ </html>