evosynth 0.1.0

data/test/ts_core.rb

@@ -0,0 +1,29 @@
+#	Copyright (c) 2009, 2010 Yves Adler <yves.adler@googlemail.com>
+#
+#	Permission is hereby granted, free of charge, to any person
+#	obtaining a copy of this software and associated documentation
+#	files (the "Software"), to deal in the Software without
+#	restriction, including without limitation the rights to use,
+#	copy, modify, merge, publish, distribute, sublicense, and/or sell
+#	copies of the Software, and to permit persons to whom the
+#	Software is furnished to do so, subject to the following
+#	conditions:
+#
+#	The above copyright notice and this permission notice shall be
+#	included in all copies or substantial portions of the Software.
+#
+#	THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+#	EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
+#	OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+#	NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
+#	HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+#	WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
+#	FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+#	OTHER DEALINGS IN THE SOFTWARE.
+
+
+require 'test/core/tc_array_genome'
+require 'test/core/tc_binary_genome'
+require 'test/core/tc_population'
+require 'test/core/tc_profile'
+require 'test/core/tc_randomizer'

data/test/ts_decoder.rb

@@ -0,0 +1,26 @@
+#	Copyright (c) 2009, 2010 Yves Adler <yves.adler@googlemail.com>
+#
+#	Permission is hereby granted, free of charge, to any person
+#	obtaining a copy of this software and associated documentation
+#	files (the "Software"), to deal in the Software without
+#	restriction, including without limitation the rights to use,
+#	copy, modify, merge, publish, distribute, sublicense, and/or sell
+#	copies of the Software, and to permit persons to whom the
+#	Software is furnished to do so, subject to the following
+#	conditions:
+#
+#	The above copyright notice and this permission notice shall be
+#	included in all copies or substantial portions of the Software.
+#
+#	THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+#	EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
+#	OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+#	NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
+#	HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+#	WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
+#	FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+#	OTHER DEALINGS IN THE SOFTWARE.
+
+
+require 'test/decoder/tc_gray'
+require 'test/decoder/tc_binary_to_real'

data/test/ts_global_recombinations.rb

@@ -0,0 +1,26 @@
+#	Copyright (c) 2009, 2010 Yves Adler <yves.adler@googlemail.com>
+#
+#	Permission is hereby granted, free of charge, to any person
+#	obtaining a copy of this software and associated documentation
+#	files (the "Software"), to deal in the Software without
+#	restriction, including without limitation the rights to use,
+#	copy, modify, merge, publish, distribute, sublicense, and/or sell
+#	copies of the Software, and to permit persons to whom the
+#	Software is furnished to do so, subject to the following
+#	conditions:
+#
+#	The above copyright notice and this permission notice shall be
+#	included in all copies or substantial portions of the Software.
+#
+#	THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+#	EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
+#	OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+#	NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
+#	HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+#	WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
+#	FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+#	OTHER DEALINGS IN THE SOFTWARE.
+
+
+require 'test/operators/global_recombinations/tc_global_uniform_crossover'
+require 'test/operators/global_recombinations/tc_global_arithmetic_crossover'

data/test/ts_meta_operators.rb

@@ -0,0 +1,27 @@
+#	Copyright (c) 2009, 2010 Yves Adler <yves.adler@googlemail.com>
+#
+#	Permission is hereby granted, free of charge, to any person
+#	obtaining a copy of this software and associated documentation
+#	files (the "Software"), to deal in the Software without
+#	restriction, including without limitation the rights to use,
+#	copy, modify, merge, publish, distribute, sublicense, and/or sell
+#	copies of the Software, and to permit persons to whom the
+#	Software is furnished to do so, subject to the following
+#	conditions:
+#
+#	The above copyright notice and this permission notice shall be
+#	included in all copies or substantial portions of the Software.
+#
+#	THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+#	EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
+#	OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+#	NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
+#	HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+#	WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
+#	FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+#	OTHER DEALINGS IN THE SOFTWARE.
+
+
+require 'test/operators/meta_operators/tc_proportional_combined_operator'
+require 'test/operators/meta_operators/tc_sequential_combined_operator'
+require 'test/operators/meta_operators/tc_conditional_combined_operator'

data/test/ts_mutations.rb

@@ -0,0 +1,35 @@
+#	Copyright (c) 2009, 2010 Yves Adler <yves.adler@googlemail.com>
+#
+#	Permission is hereby granted, free of charge, to any person
+#	obtaining a copy of this software and associated documentation
+#	files (the "Software"), to deal in the Software without
+#	restriction, including without limitation the rights to use,
+#	copy, modify, merge, publish, distribute, sublicense, and/or sell
+#	copies of the Software, and to permit persons to whom the
+#	Software is furnished to do so, subject to the following
+#	conditions:
+#
+#	The above copyright notice and this permission notice shall be
+#	included in all copies or substantial portions of the Software.
+#
+#	THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+#	EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
+#	OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+#	NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
+#	HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+#	WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
+#	FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+#	OTHER DEALINGS IN THE SOFTWARE.
+
+
+require 'test/operators/mutations/tc_shifting_muation'
+require 'test/operators/mutations/tc_mixing_mutation'
+require 'test/operators/mutations/tc_binary_mutation'
+require 'test/operators/mutations/tc_one_gene_flipping'
+require 'test/operators/mutations/tc_exchange_mutation'
+require 'test/operators/mutations/tc_inversion_mutation'
+require 'test/operators/mutations/tc_identity_mutation'
+require 'test/operators/mutations/tc_efficient_binary_mutation'
+require 'test/operators/mutations/tc_gauss_mutation'
+require 'test/operators/mutations/tc_uniform_real_mutation'
+require 'test/operators/mutations/tc_self_adaptive_gauss_mutation'

data/test/ts_problems.rb

@@ -0,0 +1,26 @@
+#	Copyright (c) 2009, 2010 Yves Adler <yves.adler@googlemail.com>
+#
+#	Permission is hereby granted, free of charge, to any person
+#	obtaining a copy of this software and associated documentation
+#	files (the "Software"), to deal in the Software without
+#	restriction, including without limitation the rights to use,
+#	copy, modify, merge, publish, distribute, sublicense, and/or sell
+#	copies of the Software, and to permit persons to whom the
+#	Software is furnished to do so, subject to the following
+#	conditions:
+#
+#	The above copyright notice and this permission notice shall be
+#	included in all copies or substantial portions of the Software.
+#
+#	THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+#	EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
+#	OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+#	NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
+#	HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+#	WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
+#	FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+#	OTHER DEALINGS IN THE SOFTWARE.
+
+
+require 'test/problems/tc_float_benchmark_functions'
+require 'test/problems/tc_binary_benchmark_functions'

data/test/ts_recombinations.rb

@@ -0,0 +1,32 @@
+#	Copyright (c) 2009, 2010 Yves Adler <yves.adler@googlemail.com>
+#
+#	Permission is hereby granted, free of charge, to any person
+#	obtaining a copy of this software and associated documentation
+#	files (the "Software"), to deal in the Software without
+#	restriction, including without limitation the rights to use,
+#	copy, modify, merge, publish, distribute, sublicense, and/or sell
+#	copies of the Software, and to permit persons to whom the
+#	Software is furnished to do so, subject to the following
+#	conditions:
+#
+#	The above copyright notice and this permission notice shall be
+#	included in all copies or substantial portions of the Software.
+#
+#	THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+#	EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
+#	OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+#	NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
+#	HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+#	WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
+#	FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+#	OTHER DEALINGS IN THE SOFTWARE.
+
+
+require 'test/operators/recombinations/tc_one_point_crossover'
+require 'test/operators/recombinations/tc_k_point_crossover'
+require 'test/operators/recombinations/tc_partially_mapped_crossover'
+require 'test/operators/recombinations/tc_uniform_crossover'
+require 'test/operators/recombinations/tc_identity_recombination'
+require 'test/operators/recombinations/tc_ordered_recombination'
+require 'test/operators/recombinations/tc_edge_recombination'
+require 'test/operators/recombinations/tc_arithmetic_crossover'

data/test/ts_selections.rb

@@ -0,0 +1,31 @@
+#	Copyright (c) 2009, 2010 Yves Adler <yves.adler@googlemail.com>
+#
+#	Permission is hereby granted, free of charge, to any person
+#	obtaining a copy of this software and associated documentation
+#	files (the "Software"), to deal in the Software without
+#	restriction, including without limitation the rights to use,
+#	copy, modify, merge, publish, distribute, sublicense, and/or sell
+#	copies of the Software, and to permit persons to whom the
+#	Software is furnished to do so, subject to the following
+#	conditions:
+#
+#	The above copyright notice and this permission notice shall be
+#	included in all copies or substantial portions of the Software.
+#
+#	THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+#	EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
+#	OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+#	NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
+#	HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+#	WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
+#	FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+#	OTHER DEALINGS IN THE SOFTWARE.
+
+
+require 'test/operators/selections/tc_best_selection'
+require 'test/operators/selections/tc_fitness_proportional_selection'
+require 'test/operators/selections/tc_roulette_wheel_selection'
+require 'test/operators/selections/tc_tournament_selection'
+require 'test/operators/selections/tc_random_selection'
+require 'test/operators/selections/tc_n_stage_tournament'
+require 'test/operators/selections/tc_identity'

data/testdata/README

@@ -0,0 +1,4 @@
+For working TSP, Ant and Graph colouring examples, please download:
+
+	http://mat.gsia.cmu.edu/COLOR/instances/myciel4.col
+	http://elib.zib.de/pub/mp-testdata/tsp/tsplib/tsp/bays29.tsp

data/testdata/bays29.tsp

@@ -0,0 +1,68 @@
+NAME: bays29
+TYPE: TSP
+COMMENT: 29 cities in Bavaria, street distances (Groetschel,Juenger,Reinelt)
+DIMENSION: 29
+EDGE_WEIGHT_TYPE: EXPLICIT
+EDGE_WEIGHT_FORMAT: FULL_MATRIX 
+DISPLAY_DATA_TYPE: TWOD_DISPLAY
+EDGE_WEIGHT_SECTION
+   0 107 241 190 124  80 316  76 152 157 283 133 113 297 228 129 348 276 188 150  65 341 184  67 221 169 108  45 167
+ 107   0 148 137  88 127 336 183 134  95 254 180 101 234 175 176 265 199 182  67  42 278 271 146 251 105 191 139  79
+ 241 148   0 374 171 259 509 317 217 232 491 312 280 391 412 349 422 356 355 204 182 435 417 292 424 116 337 273  77
+ 190 137 374   0 202 234 222 192 248  42 117 287  79 107  38 121 152  86  68  70 137 151 239 135 137 242 165 228 205
+ 124  88 171 202   0  61 392 202  46 160 319 112 163 322 240 232 314 287 238 155  65 366 300 175 307  57 220 121  97
+  80 127 259 234  61   0 386 141  72 167 351  55 157 331 272 226 362 296 232 164  85 375 249 147 301 118 188  60 185
+ 316 336 509 222 392 386   0 233 438 254 202 439 235 254 210 187 313 266 154 282 321 298 168 249  95 437 190 314 435
+  76 183 317 192 202 141 233   0 213 188 272 193 131 302 233  98 344 289 177 216 141 346 108  57 190 245  43  81 243
+ 152 134 217 248  46  72 438 213   0 206 365  89 209 368 286 278 360 333 284 201 111 412 321 221 353  72 266 132 111
+ 157  95 232  42 160 167 254 188 206   0 159 220  57 149  80 132 193 127 100  28  95 193 241 131 169 200 161 189 163
+ 283 254 491 117 319 351 202 272 365 159   0 404 176 106  79 161 165 141  95 187 254 103 279 215 117 359 216 308 322
+ 133 180 312 287 112  55 439 193  89 220 404   0 210 384 325 279 415 349 285 217 138 428 310 200 354 169 241 112 238
+ 113 101 280  79 163 157 235 131 209  57 176 210   0 186 117  75 231 165  81  85  92 230 184  74 150 208 104 158 206
+ 297 234 391 107 322 331 254 302 368 149 106 384 186   0  69 191  59  35 125 167 255  44 309 245 169 327 246 335 288
+ 228 175 412  38 240 272 210 233 286  80  79 325 117  69   0 122 122  56  56 108 175 113 240 176 125 280 177 266 243
+ 129 176 349 121 232 226 187  98 278 132 161 279  75 191 122   0 244 178  66 160 161 235 118  62  92 277  55 155 275
+ 348 265 422 152 314 362 313 344 360 193 165 415 231  59 122 244   0  66 178 198 286  77 362 287 228 358 299 380 319
+ 276 199 356  86 287 296 266 289 333 127 141 349 165  35  56 178  66   0 112 132 220  79 296 232 181 292 233 314 253
+ 188 182 355  68 238 232 154 177 284 100  95 285  81 125  56  66 178 112   0 128 167 169 179 120  69 283 121 213 281
+ 150  67 204  70 155 164 282 216 201  28 187 217  85 167 108 160 198 132 128   0  88 211 269 159 197 172 189 182 135
+  65  42 182 137  65  85 321 141 111  95 254 138  92 255 175 161 286 220 167  88   0 299 229 104 236 110 149  97 108
+ 341 278 435 151 366 375 298 346 412 193 103 428 230  44 113 235  77  79 169 211 299   0 353 289 213 371 290 379 332
+ 184 271 417 239 300 249 168 108 321 241 279 310 184 309 240 118 362 296 179 269 229 353   0 121 162 345  80 189 342
+  67 146 292 135 175 147 249  57 221 131 215 200  74 245 176  62 287 232 120 159 104 289 121   0 154 220  41  93 218
+ 221 251 424 137 307 301  95 190 353 169 117 354 150 169 125  92 228 181  69 197 236 213 162 154   0 352 147 247 350
+ 169 105 116 242  57 118 437 245  72 200 359 169 208 327 280 277 358 292 283 172 110 371 345 220 352   0 265 178  39
+ 108 191 337 165 220 188 190  43 266 161 216 241 104 246 177  55 299 233 121 189 149 290  80  41 147 265   0 124 263
+  45 139 273 228 121  60 314  81 132 189 308 112 158 335 266 155 380 314 213 182  97 379 189  93 247 178 124   0 199
+ 167  79  77 205  97 185 435 243 111 163 322 238 206 288 243 275 319 253 281 135 108 332 342 218 350  39 263 199   0
+DISPLAY_DATA_SECTION
+   1    1150.0  1760.0
+   2     630.0  1660.0
+   3      40.0  2090.0
+   4     750.0  1100.0
+   5     750.0  2030.0
+   6    1030.0  2070.0
+   7    1650.0   650.0
+   8    1490.0  1630.0
+   9     790.0  2260.0
+  10     710.0  1310.0
+  11     840.0   550.0
+  12    1170.0  2300.0
+  13     970.0  1340.0
+  14     510.0   700.0
+  15     750.0   900.0
+  16    1280.0  1200.0
+  17     230.0   590.0
+  18     460.0   860.0
+  19    1040.0   950.0
+  20     590.0  1390.0
+  21     830.0  1770.0
+  22     490.0   500.0
+  23    1840.0  1240.0
+  24    1260.0  1500.0
+  25    1280.0   790.0
+  26     490.0  2130.0
+  27    1460.0  1420.0
+  28    1260.0  1910.0
+  29     360.0  1980.0
+EOF

data/testdata/myciel4.col

@@ -0,0 +1,77 @@
+c FILE: myciel4.col
+c SOURCE: Michael Trick (trick@cmu.edu)
+c DESCRIPTION: Graph based on Mycielski transformation. 
+c              Triangle free (clique number 2) but increasing
+c              coloring number
+p edge 23 71
+e 1 2
+e 1 4
+e 1 7
+e 1 9
+e 1 13
+e 1 15
+e 1 18
+e 1 20
+e 2 3
+e 2 6
+e 2 8
+e 2 12
+e 2 14
+e 2 17
+e 2 19
+e 3 5
+e 3 7
+e 3 10
+e 3 13
+e 3 16
+e 3 18
+e 3 21
+e 4 5
+e 4 6
+e 4 10
+e 4 12
+e 4 16
+e 4 17
+e 4 21
+e 5 8
+e 5 9
+e 5 14
+e 5 15
+e 5 19
+e 5 20
+e 6 11
+e 6 13
+e 6 15
+e 6 22
+e 7 11
+e 7 12
+e 7 14
+e 7 22
+e 8 11
+e 8 13
+e 8 16
+e 8 22
+e 9 11
+e 9 12
+e 9 16
+e 9 22
+e 10 11
+e 10 14
+e 10 15
+e 10 22
+e 11 17
+e 11 18
+e 11 19
+e 11 20
+e 11 21
+e 12 23
+e 13 23
+e 14 23
+e 15 23
+e 16 23
+e 17 23
+e 18 23
+e 19 23
+e 20 23
+e 21 23
+e 22 23

metadata

@@ -0,0 +1,552 @@
+--- !ruby/object:Gem::Specification 
+name: evosynth
+version: !ruby/object:Gem::Version 
+  version: 0.1.0
+platform: ruby
+authors: 
+- Yves Adler
+autorequire: 
+bindir: bin
+cert_chain: []
+
+date: 2010-03-12 00:00:00 +01:00
+default_executable: 
+dependencies: 
+- !ruby/object:Gem::Dependency 
+  name: 
+  - shoulda
+  - rake
+  type: :development
+  version_requirement: 
+  version_requirements: !ruby/object:Gem::Requirement 
+    requirements: 
+    - - ">="
+      - !ruby/object:Gem::Version 
+        version: "0"
+    version: 
+description: 
+email: yves.adler@googlemail.com
+executables: []
+
+extensions: []
+
+extra_rdoc_files: 
+- README
+- LICENSE
+- INSTALL
+- docs/FEATURES
+files: 
+- LICENSE
+- docs
+- docs/FEATURES
+- docs/rdoc
+- docs/rdoc/rdoc-style.css
+- docs/rdoc/classes
+- docs/rdoc/classes/Examples
+- docs/rdoc/classes/Examples/EsExample.html
+- docs/rdoc/classes/Examples/CCGAExample
+- docs/rdoc/classes/Examples/CCGAExample/CCGA2BenchmarkEvaluator.html
+- docs/rdoc/classes/Examples/CCGAExample/CCGABenchmarkEvaluator.html
+- docs/rdoc/classes/Examples/CCGAExample/CCGAIndividual.html
+- docs/rdoc/classes/Examples/CMBExample.html
+- docs/rdoc/classes/Examples/Partitionproblem.html
+- docs/rdoc/classes/Examples/Exporter.html
+- docs/rdoc/classes/Examples/EsExample
+- docs/rdoc/classes/Examples/EsExample/BenchmarkEvaluator.html
+- docs/rdoc/classes/Examples/Hacking
+- docs/rdoc/classes/Examples/Hacking/HackingEvaluator.html
+- docs/rdoc/classes/Examples/Ants
+- docs/rdoc/classes/Examples/Ants/AntMutation.html
+- docs/rdoc/classes/Examples/Ants/Pheromon.html
+- docs/rdoc/classes/Examples/Ants.html
+- docs/rdoc/classes/Examples/LocalSearch.html
+- docs/rdoc/classes/Examples/LocalSearch
+- docs/rdoc/classes/Examples/LocalSearch/LocalSearchEvaluator.html
+- docs/rdoc/classes/Examples/Partitionproblem
+- docs/rdoc/classes/Examples/Partitionproblem/Testdata.html
+- docs/rdoc/classes/Examples/Partitionproblem/PartitionMutation.html
+- docs/rdoc/classes/Examples/Partitionproblem/PartitionEvaluator.html
+- docs/rdoc/classes/Examples/Partitionproblem/PartitionIndividual.html
+- docs/rdoc/classes/Examples/CCGAExample.html
+- docs/rdoc/classes/Examples/MaxOnes.html
+- docs/rdoc/classes/Examples/Hacking.html
+- docs/rdoc/classes/Examples/MaxOnes
+- docs/rdoc/classes/Examples/MaxOnes/MaxOnesEvaluator.html
+- docs/rdoc/classes/Examples/SPk.html
+- docs/rdoc/classes/Examples/SPk
+- docs/rdoc/classes/Examples/SPk/SPkFitnessEvaluator.html
+- docs/rdoc/classes/Examples/TSP.html
+- docs/rdoc/classes/Examples/CMBExample
+- docs/rdoc/classes/Examples/CMBExample/CMBEvaluator.html
+- docs/rdoc/classes/Examples/Exporter
+- docs/rdoc/classes/Examples/Exporter/ExporterEvaluator.html
+- docs/rdoc/classes/Examples/GraphColouring.html
+- docs/rdoc/classes/EvoSynth.html
+- docs/rdoc/classes/EvoSynth
+- docs/rdoc/classes/EvoSynth/ArrayGenome.html
+- docs/rdoc/classes/EvoSynth/Profile.html
+- docs/rdoc/classes/EvoSynth/Output
+- docs/rdoc/classes/EvoSynth/Output/Logger.html
+- docs/rdoc/classes/EvoSynth/Output/ConsoleWriter.html
+- docs/rdoc/classes/EvoSynth/Output/GnuPlotExporter.html
+- docs/rdoc/classes/EvoSynth/Output/CSVExporter.html
+- docs/rdoc/classes/EvoSynth/Output/GruffExporter.html
+- docs/rdoc/classes/EvoSynth/MaximizingIndividual.html
+- docs/rdoc/classes/EvoSynth/Recombinations.html
+- docs/rdoc/classes/EvoSynth/Evaluator.html
+- docs/rdoc/classes/EvoSynth/Recombinations
+- docs/rdoc/classes/EvoSynth/Recombinations/ArithmeticCrossover.html
+- docs/rdoc/classes/EvoSynth/Recombinations/UniformCrossover.html
+- docs/rdoc/classes/EvoSynth/Recombinations/OrderedRecombination.html
+- docs/rdoc/classes/EvoSynth/Recombinations/KPointCrossover.html
+- docs/rdoc/classes/EvoSynth/Recombinations/Identity.html
+- docs/rdoc/classes/EvoSynth/Recombinations/EdgeRecombination.html
+- docs/rdoc/classes/EvoSynth/Recombinations/OnePointCrossover.html
+- docs/rdoc/classes/EvoSynth/Recombinations/PartiallyMappedCrossover.html
+- docs/rdoc/classes/EvoSynth/Mutations.html
+- docs/rdoc/classes/EvoSynth/Decoder.html
+- docs/rdoc/classes/EvoSynth/Population.html
+- docs/rdoc/classes/EvoSynth/Evolvers
+- docs/rdoc/classes/EvoSynth/Evolvers/GeneticAlgorithm.html
+- docs/rdoc/classes/EvoSynth/Evolvers/ProfileUsingEvolver.html
+- docs/rdoc/classes/EvoSynth/Evolvers/RunnableEvolver.html
+- docs/rdoc/classes/EvoSynth/Evolvers/MemeticAlgorithm.html
+- docs/rdoc/classes/EvoSynth/Evolvers/AdaptiveES.html
+- docs/rdoc/classes/EvoSynth/Evolvers/BalancedCoevolutionary.html
+- docs/rdoc/classes/EvoSynth/Evolvers/Evolver.html
+- docs/rdoc/classes/EvoSynth/Evolvers/LocalSearch.html
+- docs/rdoc/classes/EvoSynth/Evolvers/LocalSearch
+- docs/rdoc/classes/EvoSynth/Evolvers/LocalSearch/GreatDelugeAcceptance.html
+- docs/rdoc/classes/EvoSynth/Evolvers/LocalSearch/SimulatedAnnealingAcceptance.html
+- docs/rdoc/classes/EvoSynth/Evolvers/LocalSearch/HillclimberAcceptance.html
+- docs/rdoc/classes/EvoSynth/Evolvers/LocalSearch/ThresholdAcceptance.html
+- docs/rdoc/classes/EvoSynth/Evolvers/LocalSearch/RecordToRecordTravelAcceptance.html
+- docs/rdoc/classes/EvoSynth/Evolvers/Hillclimber.html
+- docs/rdoc/classes/EvoSynth/Evolvers/RunnableEvolver
+- docs/rdoc/classes/EvoSynth/Evolvers/RunnableEvolver/Goal.html
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+- TODO
+- Rakefile
+- testdata
+- testdata/myciel4.col
+- testdata/README
+- testdata/bays29.tsp
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+- test/problems
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+- test/problems/tc_binary_benchmark_functions.rb
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+- test/operators/adjustments/tc_adaptive_adjustment.rb
+- test/operators/global_recombinations
+- test/operators/global_recombinations/tc_global_arithmetic_crossover.rb
+- test/operators/global_recombinations/tc_global_uniform_crossover.rb
+- test/operators/selections
+- test/operators/selections/tc_tournament_selection.rb
+- test/operators/selections/tc_roulette_wheel_selection.rb
+- test/operators/selections/tc_fitness_proportional_selection.rb
+- test/operators/selections/tc_identity.rb
+- test/operators/selections/tc_n_stage_tournament.rb
+- test/operators/selections/tc_random_selection.rb
+- test/operators/selections/tc_best_selection.rb
+- test/operators/mutations
+- test/operators/mutations/tc_shifting_muation.rb
+- test/operators/mutations/tc_efficient_binary_mutation.rb
+- test/operators/mutations/tc_inversion_mutation.rb
+- test/operators/mutations/tc_one_gene_flipping.rb
+- test/operators/mutations/tc_gauss_mutation.rb
+- test/operators/mutations/tc_uniform_real_mutation.rb
+- test/operators/mutations/tc_exchange_mutation.rb
+- test/operators/mutations/tc_mixing_mutation.rb
+- test/operators/mutations/tc_binary_mutation.rb
+- test/operators/mutations/tc_identity_mutation.rb
+- test/operators/mutations/tc_self_adaptive_gauss_mutation.rb
+- test/operators/recombinations
+- test/operators/recombinations/tc_k_point_crossover.rb
+- test/operators/recombinations/tc_edge_recombination.rb
+- test/operators/recombinations/tc_partially_mapped_crossover.rb
+- test/operators/recombinations/tc_one_point_crossover.rb
+- test/operators/recombinations/tc_identity_recombination.rb
+- test/operators/recombinations/tc_ordered_recombination.rb
+- test/operators/recombinations/tc_arithmetic_crossover.rb
+- test/operators/recombinations/tc_uniform_crossover.rb
+- test/operators/meta_operators
+- test/operators/meta_operators/tc_conditional_combined_operator.rb
+- test/operators/meta_operators/tc_sequential_combined_operator.rb
+- test/operators/meta_operators/tc_proportional_combined_operator.rb
+- test/ts_problems.rb
+- test/benchmark
+- test/benchmark/mutation_benchmark.rb
+- test/benchmark/selection_benchmark.rb
+- test/benchmark/recombination_benchmark.rb
+- test/benchmark/decoder_benchmark.rb
+- test/ts_decoder.rb
+- test/ts_global_recombinations.rb
+- test/coverage.rb
+- test/core
+- test/core/tc_array_genome.rb
+- test/core/tc_binary_genome.rb
+- test/core/tc_profile.rb
+- test/core/tc_randomizer.rb
+- test/core/tc_population.rb
+- test/ts_adjustments.rb
+- test/decoder
+- test/decoder/tc_binary_to_real.rb
+- test/decoder/tc_gray.rb
+- test/ts_recombinations.rb
+- test/ts_meta_operators.rb
+- test/ts_core.rb
+- test/ts_mutations.rb
+- test/ts_selections.rb
+- examples
+- examples/ccga_example.rb
+- examples/local_search.rb
+- examples/graph_colouring.rb
+- examples/cmb_example.rb
+- examples/hacking.rb
+- examples/spk.rb
+- examples/max_ones.rb
+- examples/tsp.rb
+- examples/evolution_strategies.rb
+- examples/ants.rb
+- examples/exporter.rb
+- examples/partition.rb
+- lib
+- lib/evosynth.rb
+- lib/evosynth
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+- lib/evosynth/problems/float_benchmark_functions.rb
+- lib/evosynth/problems/tsp.rb
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+- lib/evosynth/operators/adjustments/adaptive_adjustment.rb
+- lib/evosynth/operators/meta_operators.rb
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+- lib/evosynth/operators/global_recombinations
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+- lib/evosynth/operators/global_recombinations/global_uniform_crossover.rb
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+- lib/evosynth/operators/selections/best_selection.rb
+- lib/evosynth/operators/selections/roulette_wheel_selection.rb
+- lib/evosynth/operators/selections/n_stage_tournament_selection.rb
+- lib/evosynth/operators/selections/identity.rb
+- lib/evosynth/operators/selections/fitness_proportional_selection.rb
+- lib/evosynth/operators/selections/random_selection.rb
+- lib/evosynth/operators/mutations
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+- lib/evosynth/operators/mutations/exchange_mutation.rb
+- lib/evosynth/operators/mutations/binary_mutation.rb
+- lib/evosynth/operators/mutations/uniform_real_mutation.rb
+- lib/evosynth/operators/mutations/shifting_mutation.rb
+- lib/evosynth/operators/mutations/self_adaptive_gauss_mutation.rb
+- lib/evosynth/operators/mutations/mixing_mutation.rb
+- lib/evosynth/operators/mutations/one_gene_flipping.rb
+- lib/evosynth/operators/mutations/gauss_mutation.rb
+- lib/evosynth/operators/mutations/flip_functions.rb
+- lib/evosynth/operators/mutations/identity.rb
+- lib/evosynth/operators/mutations/efficient_binary_mutation.rb
+- lib/evosynth/operators/recombinations
+- lib/evosynth/operators/recombinations/partially_mapped_crossover.rb
+- lib/evosynth/operators/recombinations/one_point_crossover.rb
+- lib/evosynth/operators/recombinations/edge_recombination.rb
+- lib/evosynth/operators/recombinations/ordered_recombination.rb
+- lib/evosynth/operators/recombinations/arithmetic_crossover.rb
+- lib/evosynth/operators/recombinations/uniform_crossover.rb
+- lib/evosynth/operators/recombinations/identity.rb
+- lib/evosynth/operators/recombinations/k_point_crossover.rb
+- lib/evosynth/operators/meta_operators
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+- lib/evosynth/operators/mutations.rb
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+- lib/evosynth/output/exporter/gruff_exporter.rb
+- lib/evosynth/output/exporter/csv_exporter.rb
+- lib/evosynth/output/factory.rb
+- lib/evosynth/output/exporter.rb
+- lib/evosynth/decoder.rb
+- lib/evosynth/core
+- lib/evosynth/core/minimizing_individual.rb
+- lib/evosynth/core/randomizer.rb
+- lib/evosynth/core/profile.rb
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+- lib/evosynth/core/maximizing_individual.rb
+- lib/evosynth/core/binary_genome.rb
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+- lib/evosynth/evolvers.rb
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+- lib/evosynth/decoder/gray.rb
+- lib/evosynth/problems.rb
+- lib/evosynth/operators.rb
+- lib/evosynth/evolvers
+- lib/evosynth/evolvers/coevolutionary
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+- lib/evosynth/evolvers/coevolutionary/balanced_coevolutionary.rb
+- lib/evosynth/evolvers/local_search
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+- lib/evosynth/evolvers/local_search/acceptance_great_deluge.rb
+- lib/evosynth/evolvers/local_search/acceptance_simulated_annealing.rb
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+- lib/evosynth/evolvers/basic/genetic_algorithm.rb
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+- lib/evosynth/evolvers/elitism.rb
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+homepage: http://evosynth.rubyforge.org
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+  requirements: 
+  - - ">="
+    - !ruby/object:Gem::Version 
+      version: "1.9"
+  version: 
+required_rubygems_version: !ruby/object:Gem::Requirement 
+  requirements: 
+  - - ">="
+    - !ruby/object:Gem::Version 
+      version: "0"
+  version: 
+requirements: []
+
+rubyforge_project: evosynth
+rubygems_version: 1.3.1
+signing_key: 
+specification_version: 2
+summary: EvoSynth (Evolutionary Computation Synthesizer) is a framework for rapid development and prototyping of evolutionary algorithms.
+test_files: 
+- test/ts_problems.rb
+- test/ts_decoder.rb
+- test/ts_global_recombinations.rb
+- test/ts_adjustments.rb
+- test/ts_recombinations.rb
+- test/ts_meta_operators.rb
+- test/ts_core.rb
+- test/ts_mutations.rb
+- test/ts_selections.rb