bn4r 0.1.2 → 0.9.0

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Files changed (432) hide show
  1. data/CHANGELOG +15 -1
  2. data/README +9 -2
  3. data/doc/classes/BNTPGFromPositiveNegativeRelations.html +184 -171
  4. data/doc/classes/BNTPGFromPositiveNegativeRelations.src/M000031.html +20 -20
  5. data/doc/classes/BNTPGFromPositiveNegativeRelations.src/M000032.html +15 -15
  6. data/doc/classes/BayesNet.html +986 -560
  7. data/doc/classes/BayesNet.src/M000003.html +19 -17
  8. data/doc/classes/BayesNet.src/M000004.html +34 -16
  9. data/doc/classes/BayesNet.src/M000005.html +24 -17
  10. data/doc/classes/BayesNet.src/M000006.html +18 -18
  11. data/doc/classes/BayesNet.src/M000007.html +21 -17
  12. data/doc/classes/BayesNet.src/M000008.html +17 -19
  13. data/doc/classes/BayesNet.src/M000009.html +17 -18
  14. data/doc/classes/BayesNet.src/M000010.html +18 -17
  15. data/doc/classes/BayesNet.src/M000011.html +17 -22
  16. data/doc/classes/BayesNet.src/M000012.html +17 -24
  17. data/doc/classes/BayesNet.src/M000013.html +17 -26
  18. data/doc/classes/BayesNet.src/M000014.html +20 -42
  19. data/doc/classes/BayesNet.src/M000015.html +18 -33
  20. data/doc/classes/BayesNet.src/M000016.html +17 -38
  21. data/doc/classes/BayesNet.src/M000017.html +17 -37
  22. data/doc/classes/BayesNet.src/M000018.html +19 -32
  23. data/doc/classes/BayesNet.src/M000019.html +18 -19
  24. data/doc/classes/BayesNet.src/M000020.html +17 -35
  25. data/doc/classes/BayesNet.src/M000021.html +22 -52
  26. data/doc/classes/BayesNet.src/M000022.html +22 -16
  27. data/doc/classes/BayesNet.src/M000023.html +24 -17
  28. data/doc/classes/BayesNet.src/M000024.html +30 -16
  29. data/doc/classes/BayesNet.src/M000025.html +42 -18
  30. data/doc/classes/BayesNet.src/M000026.html +32 -16
  31. data/doc/classes/BayesNet.src/M000027.html +38 -19
  32. data/doc/classes/BayesNet.src/M000028.html +42 -18
  33. data/doc/classes/BayesNet.src/M000029.html +32 -17
  34. data/doc/classes/BayesNet.src/M000030.html +52 -22
  35. data/doc/classes/BayesNetNode.html +604 -476
  36. data/doc/classes/BayesNetNode.src/M000033.html +21 -17
  37. data/doc/classes/BayesNetNode.src/M000034.html +17 -17
  38. data/doc/classes/BayesNetNode.src/M000035.html +20 -25
  39. data/doc/classes/BayesNetNode.src/M000036.html +17 -17
  40. data/doc/classes/BayesNetNode.src/M000037.html +17 -19
  41. data/doc/classes/BayesNetNode.src/M000038.html +17 -17
  42. data/doc/classes/BayesNetNode.src/M000039.html +17 -22
  43. data/doc/classes/BayesNetNode.src/M000040.html +17 -51
  44. data/doc/classes/BayesNetNode.src/M000041.html +21 -18
  45. data/doc/classes/BayesNetNode.src/M000042.html +18 -17
  46. data/doc/classes/BayesNetNode.src/M000043.html +17 -17
  47. data/doc/classes/BayesNetNode.src/M000044.html +17 -25
  48. data/doc/classes/BayesNetNode.src/M000045.html +24 -16
  49. data/doc/classes/BayesNetNode.src/M000046.html +17 -19
  50. data/doc/classes/BayesNetNode.src/M000047.html +19 -17
  51. data/doc/classes/BayesNetNode.src/M000048.html +17 -22
  52. data/doc/classes/BayesNetNode.src/M000049.html +23 -51
  53. data/doc/classes/BayesNetNode.src/M000050.html +51 -21
  54. data/doc/classes/BnTableProbabilitiesGenerator.html +122 -142
  55. data/doc/classes/BnTableProbabilitiesGenerator.src/{M000036.html → M000051.html} +15 -15
  56. data/doc/created.rid +1 -1
  57. data/doc/files/README.html +267 -264
  58. data/doc/files/README_es.html +271 -0
  59. data/doc/files/lib/bn4r/bn_algorithms_rb.html +125 -130
  60. data/doc/files/lib/bn4r/bn_export_rb.html +119 -124
  61. data/doc/files/lib/bn4r/bn_import_rb.html +133 -144
  62. data/doc/files/lib/bn4r/bn_rb.html +124 -134
  63. data/doc/files/lib/bn4r/bn_table_probabilities_rb.html +165 -140
  64. data/doc/files/lib/bn4r/bn_table_probabilities_rb.src/M000001.html +15 -15
  65. data/doc/files/lib/bn4r/bn_table_probabilities_rb.src/M000002.html +26 -0
  66. data/doc/files/lib/bn4r/version_rb.html +97 -100
  67. data/doc/files/lib/bn4r_rb.html +108 -113
  68. data/doc/fr_class_index.html +49 -30
  69. data/doc/fr_file_index.html +54 -34
  70. data/doc/fr_method_index.html +96 -67
  71. data/doc/index.html +25 -23
  72. data/doc/rdoc-style.css +175 -208
  73. data/lib/bn4r/bn.rb +76 -5
  74. data/lib/bn4r/bn_algorithms.rb +13 -3
  75. data/lib/bn4r/bn_export.rb +29 -15
  76. data/lib/bn4r/bn_table_probabilities.rb +10 -0
  77. data/lib/bn4r/version.rb +2 -2
  78. data/test/bn4r_test.rb +104 -0
  79. data/test/test_helper.rb +1 -0
  80. metadata +15 -393
  81. data/doc/classes/BNTPGFromPositiveNegativeRelations.src/M000018.html +0 -41
  82. data/doc/classes/BNTPGFromPositiveNegativeRelations.src/M000019.html +0 -23
  83. data/doc/classes/BNTPGFromPositiveNegativeRelations.src/M000021.html +0 -41
  84. data/doc/classes/BNTPGFromPositiveNegativeRelations.src/M000022.html +0 -41
  85. data/doc/classes/BNTPGFromPositiveNegativeRelations.src/M000023.html +0 -23
  86. data/doc/classes/BNTPGFromPositiveNegativeRelations.src/M000143.html +0 -41
  87. data/doc/classes/BNTPGFromPositiveNegativeRelations.src/M000144.html +0 -23
  88. data/doc/classes/BNTPGFromPositiveNegativeRelations.src/M000145.html +0 -41
  89. data/doc/classes/BNTPGFromPositiveNegativeRelations.src/M000146.html +0 -23
  90. data/doc/classes/BayesNet.src/M000001.html +0 -22
  91. data/doc/classes/BayesNet.src/M000002.html +0 -25
  92. data/doc/classes/BayesNet.src/M000091.html +0 -25
  93. data/doc/classes/BayesNet.src/M000092.html +0 -18
  94. data/doc/classes/BayesNet.src/M000093.html +0 -18
  95. data/doc/classes/BayesNet.src/M000094.html +0 -18
  96. data/doc/classes/BayesNet.src/M000095.html +0 -19
  97. data/doc/classes/BayesNet.src/M000096.html +0 -18
  98. data/doc/classes/BayesNet.src/M000097.html +0 -20
  99. data/doc/classes/BayesNet.src/M000098.html +0 -19
  100. data/doc/classes/BayesNet.src/M000099.html +0 -18
  101. data/doc/classes/BayesNet.src/M000100.html +0 -23
  102. data/doc/classes/BayesNet.src/M000101.html +0 -25
  103. data/doc/classes/BayesNet.src/M000102.html +0 -27
  104. data/doc/classes/BayesNet.src/M000103.html +0 -43
  105. data/doc/classes/BayesNet.src/M000104.html +0 -34
  106. data/doc/classes/BayesNet.src/M000105.html +0 -39
  107. data/doc/classes/BayesNet.src/M000106.html +0 -38
  108. data/doc/classes/BayesNet.src/M000107.html +0 -33
  109. data/doc/classes/BayesNet.src/M000108.html +0 -18
  110. data/doc/classes/BayesNet.src/M000109.html +0 -35
  111. data/doc/classes/BayesNet.src/M000110.html +0 -22
  112. data/doc/classes/BayesNet.src/M000111.html +0 -18
  113. data/doc/classes/BayesNet.src/M000112.html +0 -18
  114. data/doc/classes/BayesNet.src/M000113.html +0 -18
  115. data/doc/classes/BayesNet.src/M000114.html +0 -19
  116. data/doc/classes/BayesNet.src/M000115.html +0 -18
  117. data/doc/classes/BayesNet.src/M000116.html +0 -20
  118. data/doc/classes/BayesNet.src/M000117.html +0 -19
  119. data/doc/classes/BayesNet.src/M000118.html +0 -18
  120. data/doc/classes/BayesNet.src/M000119.html +0 -23
  121. data/doc/classes/BayesNet.src/M000120.html +0 -25
  122. data/doc/classes/BayesNet.src/M000121.html +0 -27
  123. data/doc/classes/BayesNet.src/M000122.html +0 -43
  124. data/doc/classes/BayesNet.src/M000123.html +0 -33
  125. data/doc/classes/BayesNet.src/M000124.html +0 -39
  126. data/doc/classes/BayesNet.src/M000125.html +0 -38
  127. data/doc/classes/BayesNet.src/M000126.html +0 -33
  128. data/doc/classes/BayesNetNode.src/M000020.html +0 -22
  129. data/doc/classes/BayesNetNode.src/M000021.html +0 -21
  130. data/doc/classes/BayesNetNode.src/M000022.html +0 -18
  131. data/doc/classes/BayesNetNode.src/M000023.html +0 -22
  132. data/doc/classes/BayesNetNode.src/M000024.html +0 -22
  133. data/doc/classes/BayesNetNode.src/M000025.html +0 -21
  134. data/doc/classes/BayesNetNode.src/M000026.html +0 -18
  135. data/doc/classes/BayesNetNode.src/M000027.html +0 -18
  136. data/doc/classes/BayesNetNode.src/M000028.html +0 -18
  137. data/doc/classes/BayesNetNode.src/M000029.html +0 -18
  138. data/doc/classes/BayesNetNode.src/M000030.html +0 -18
  139. data/doc/classes/BayesNetNode.src/M000031.html +0 -19
  140. data/doc/classes/BayesNetNode.src/M000032.html +0 -19
  141. data/doc/classes/BayesNetNode.src/M000051.html +0 -21
  142. data/doc/classes/BayesNetNode.src/M000052.html +0 -18
  143. data/doc/classes/BayesNetNode.src/M000053.html +0 -18
  144. data/doc/classes/BayesNetNode.src/M000054.html +0 -18
  145. data/doc/classes/BayesNetNode.src/M000055.html +0 -18
  146. data/doc/classes/BayesNetNode.src/M000056.html +0 -18
  147. data/doc/classes/BayesNetNode.src/M000057.html +0 -19
  148. data/doc/classes/BayesNetNode.src/M000058.html +0 -19
  149. data/doc/classes/BayesNetNode.src/M000059.html +0 -18
  150. data/doc/classes/BayesNetNode.src/M000060.html +0 -18
  151. data/doc/classes/BayesNetNode.src/M000061.html +0 -26
  152. data/doc/classes/BayesNetNode.src/M000062.html +0 -18
  153. data/doc/classes/BayesNetNode.src/M000063.html +0 -20
  154. data/doc/classes/BayesNetNode.src/M000064.html +0 -18
  155. data/doc/classes/BayesNetNode.src/M000065.html +0 -23
  156. data/doc/classes/BayesNetNode.src/M000066.html +0 -52
  157. data/doc/classes/BayesNetNode.src/M000147.html +0 -22
  158. data/doc/classes/BayesNetNode.src/M000148.html +0 -21
  159. data/doc/classes/BayesNetNode.src/M000149.html +0 -18
  160. data/doc/classes/BayesNetNode.src/M000150.html +0 -18
  161. data/doc/classes/BayesNetNode.src/M000151.html +0 -18
  162. data/doc/classes/BayesNetNode.src/M000152.html +0 -18
  163. data/doc/classes/BayesNetNode.src/M000153.html +0 -18
  164. data/doc/classes/BayesNetNode.src/M000154.html +0 -19
  165. data/doc/classes/BayesNetNode.src/M000155.html +0 -19
  166. data/doc/classes/BayesNetNode.src/M000156.html +0 -18
  167. data/doc/classes/BayesNetNode.src/M000157.html +0 -18
  168. data/doc/classes/BayesNetNode.src/M000158.html +0 -26
  169. data/doc/classes/BayesNetNode.src/M000159.html +0 -18
  170. data/doc/classes/BayesNetNode.src/M000160.html +0 -20
  171. data/doc/classes/BayesNetNode.src/M000161.html +0 -18
  172. data/doc/classes/BayesNetNode.src/M000162.html +0 -23
  173. data/doc/classes/BayesNetNode.src/M000163.html +0 -52
  174. data/doc/classes/BayesNetNode.src/M000164.html +0 -22
  175. data/doc/classes/BayesNetNode.src/M000165.html +0 -21
  176. data/doc/classes/BayesNetNode.src/M000166.html +0 -18
  177. data/doc/classes/BayesNetNode.src/M000167.html +0 -18
  178. data/doc/classes/BayesNetNode.src/M000168.html +0 -18
  179. data/doc/classes/BayesNetNode.src/M000169.html +0 -18
  180. data/doc/classes/BayesNetNode.src/M000170.html +0 -18
  181. data/doc/classes/BayesNetNode.src/M000171.html +0 -19
  182. data/doc/classes/BayesNetNode.src/M000172.html +0 -18
  183. data/doc/classes/BayesNetNode.src/M000173.html +0 -18
  184. data/doc/classes/BayesNetNode.src/M000174.html +0 -26
  185. data/doc/classes/BayesNetNode.src/M000175.html +0 -18
  186. data/doc/classes/BayesNetNode.src/M000176.html +0 -20
  187. data/doc/classes/BayesNetNode.src/M000177.html +0 -18
  188. data/doc/classes/BayesNetNode.src/M000178.html +0 -23
  189. data/doc/classes/BayesNetNode.src/M000179.html +0 -52
  190. data/doc/classes/Bn4rTest.html +0 -549
  191. data/doc/classes/Bn4rTest.src/M000180.html +0 -17
  192. data/doc/classes/Bn4rTest.src/M000181.html +0 -21
  193. data/doc/classes/Bn4rTest.src/M000182.html +0 -21
  194. data/doc/classes/Bn4rTest.src/M000183.html +0 -34
  195. data/doc/classes/Bn4rTest.src/M000184.html +0 -27
  196. data/doc/classes/Bn4rTest.src/M000185.html +0 -23
  197. data/doc/classes/Bn4rTest.src/M000186.html +0 -42
  198. data/doc/classes/Bn4rTest.src/M000187.html +0 -39
  199. data/doc/classes/Bn4rTest.src/M000188.html +0 -25
  200. data/doc/classes/Bn4rTest.src/M000189.html +0 -45
  201. data/doc/classes/Bn4rTest.src/M000190.html +0 -32
  202. data/doc/classes/Bn4rTest.src/M000191.html +0 -32
  203. data/doc/classes/Bn4rTest.src/M000192.html +0 -45
  204. data/doc/classes/Bn4rTest.src/M000193.html +0 -41
  205. data/doc/classes/Bn4rTest.src/M000194.html +0 -42
  206. data/doc/classes/Bn4rTest.src/M000195.html +0 -17
  207. data/doc/classes/Bn4rTest.src/M000196.html +0 -21
  208. data/doc/classes/Bn4rTest.src/M000197.html +0 -21
  209. data/doc/classes/Bn4rTest.src/M000198.html +0 -34
  210. data/doc/classes/Bn4rTest.src/M000199.html +0 -27
  211. data/doc/classes/Bn4rTest.src/M000200.html +0 -23
  212. data/doc/classes/Bn4rTest.src/M000201.html +0 -42
  213. data/doc/classes/Bn4rTest.src/M000202.html +0 -39
  214. data/doc/classes/Bn4rTest.src/M000203.html +0 -25
  215. data/doc/classes/Bn4rTest.src/M000204.html +0 -45
  216. data/doc/classes/Bn4rTest.src/M000205.html +0 -32
  217. data/doc/classes/Bn4rTest.src/M000206.html +0 -32
  218. data/doc/classes/BnTableProbabilitiesGenerator.src/M000040.html +0 -18
  219. data/doc/classes/BnTableProbabilitiesGenerator.src/M000041.html +0 -18
  220. data/doc/classes/BnTableProbabilitiesGenerator.src/M000067.html +0 -18
  221. data/doc/classes/BnTableProbabilitiesGenerator.src/M000207.html +0 -18
  222. data/doc/classes/BnTableProbabilitiesGenerator.src/M000208.html +0 -18
  223. data/doc/classes/ConfigTable.html +0 -500
  224. data/doc/classes/ConfigTable.src/M000007.html +0 -25
  225. data/doc/classes/ConfigTable.src/M000008.html +0 -18
  226. data/doc/classes/ConfigTable.src/M000009.html +0 -18
  227. data/doc/classes/ConfigTable.src/M000010.html +0 -18
  228. data/doc/classes/ConfigTable.src/M000011.html +0 -18
  229. data/doc/classes/ConfigTable.src/M000012.html +0 -18
  230. data/doc/classes/ConfigTable.src/M000013.html +0 -18
  231. data/doc/classes/ConfigTable.src/M000014.html +0 -18
  232. data/doc/classes/ConfigTable.src/M000015.html +0 -18
  233. data/doc/classes/ConfigTable.src/M000016.html +0 -19
  234. data/doc/classes/ConfigTable.src/M000017.html +0 -21
  235. data/doc/classes/ConfigTable.src/M000018.html +0 -20
  236. data/doc/classes/ConfigTable.src/M000019.html +0 -18
  237. data/doc/classes/ConfigTable.src/M000020.html +0 -25
  238. data/doc/classes/ConfigTable.src/M000021.html +0 -23
  239. data/doc/classes/ConfigTable.src/M000022.html +0 -20
  240. data/doc/classes/ConfigTable.src/M000023.html +0 -20
  241. data/doc/classes/ConfigTable.src/M000024.html +0 -23
  242. data/doc/classes/ConfigTable.src/M000025.html +0 -19
  243. data/doc/classes/ConfigTable.src/M000026.html +0 -18
  244. data/doc/classes/ConfigTable.src/M000027.html +0 -18
  245. data/doc/classes/ConfigTable/BoolItem.html +0 -154
  246. data/doc/classes/ConfigTable/BoolItem.src/M000028.html +0 -18
  247. data/doc/classes/ConfigTable/BoolItem.src/M000029.html +0 -18
  248. data/doc/classes/ConfigTable/ExecItem.html +0 -201
  249. data/doc/classes/ConfigTable/ExecItem.src/M000047.html +0 -20
  250. data/doc/classes/ConfigTable/ExecItem.src/M000048.html +0 -18
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  254. data/doc/classes/ConfigTable/Item.html +0 -250
  255. data/doc/classes/ConfigTable/Item.src/M000054.html +0 -22
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  260. data/doc/classes/ConfigTable/Item.src/M000059.html +0 -18
  261. data/doc/classes/ConfigTable/MetaConfigEnvironment.html +0 -325
  262. data/doc/classes/ConfigTable/MetaConfigEnvironment.src/M000034.html +0 -19
  263. data/doc/classes/ConfigTable/MetaConfigEnvironment.src/M000035.html +0 -18
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  274. data/doc/classes/ConfigTable/MetaConfigEnvironment.src/M000046.html +0 -19
  275. data/doc/classes/ConfigTable/PackageSelectionItem.html +0 -169
  276. data/doc/classes/ConfigTable/PackageSelectionItem.src/M000032.html +0 -19
  277. data/doc/classes/ConfigTable/PackageSelectionItem.src/M000033.html +0 -18
  278. data/doc/classes/ConfigTable/PathItem.html +0 -139
  279. data/doc/classes/ConfigTable/PathItem.src/M000031.html +0 -18
  280. data/doc/classes/ConfigTable/ProgramItem.html +0 -139
  281. data/doc/classes/ConfigTable/ProgramItem.src/M000030.html +0 -18
  282. data/doc/classes/ConfigTable/SelectItem.html +0 -156
  283. data/doc/classes/ConfigTable/SelectItem.src/M000052.html +0 -19
  284. data/doc/classes/ConfigTable/SelectItem.src/M000053.html +0 -18
  285. data/doc/classes/Enumerable.html +0 -118
  286. data/doc/classes/Errno.html +0 -111
  287. data/doc/classes/Errno/ENOTEMPTY.html +0 -111
  288. data/doc/classes/File.html +0 -166
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  291. data/doc/classes/File.src/M000278.html +0 -18
  292. data/doc/classes/FileOperations.html +0 -375
  293. data/doc/classes/FileOperations.src/M000291.html +0 -31
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data/CHANGELOG CHANGED
@@ -1,4 +1,18 @@
1
- *0.1.1*
1
+ *0.9*
2
+ - Supports non boolean outcomes. The value of a node can be discrete,
3
+ is not obligatory to be boolean.
4
+
5
+ *0.1.4*
6
+ - New methods:
7
+ - leafs, each_leaf, childs(node), each_child(node)
8
+ - nodes_ordered_by_breath_first_search
9
+ - xbn exports with nodes positioned more intuitive.
10
+
11
+ *0.1.3*
12
+ - Added method deep in BayesNet and BayesNetNode
13
+ - Export to_xbn with deep level
14
+
15
+ *0.1.2*
2
16
  - Added export methods:
3
17
  - create_from_xmlbif
4
18
  *0.1.1*
data/README CHANGED
@@ -11,6 +11,10 @@ Intelligence, A Modern Approach", 2nd Edition.
11
11
  Website:
12
12
  http://bn4r.rubyforge.org
13
13
 
14
+ Spanish Website:
15
+ http://bn4r.rubyforge.org/es
16
+
17
+
14
18
  Rubyforge Project:
15
19
  http://rubyforge.org/projects/bn4r
16
20
 
@@ -28,12 +32,15 @@ especialization of RGL::DirectedAdjacencyGraph ( http://rgl.rubyforge.org ).
28
32
  The file bn_algorithms.rb has the implementation of the inference algorithms
29
33
  that can be used to solve BayesNet structures.
30
34
 
35
+ Files bn_export.rb and bn_import.rb have methods for import and export bayesian
36
+ networkd in different formats.
37
+
31
38
  Finally, a set of objects and methods are given to automaticly fill BayesNetNode
32
39
  probabilities tables.
33
40
 
34
41
  == Play a bit ...
35
42
 
36
- 1. Install the gem
43
+ 1. Install the gem ( bn4r-0.1.2.gem )
37
44
  gem install bn4r
38
45
 
39
46
  2. Include the bn4r
@@ -118,7 +125,7 @@ Also thanks to all the ruby community.
118
125
  == Copying
119
126
 
120
127
  This work is developed by Sergio Espeja ( http://www.upf.edu/pdi/iula/sergio.espeja, sergio.espeja at gmail.com )
121
- mainly in Institut Universitari de Ling�istica Aplicada of Universitat Pompeu Fabra ( http://www.iula.upf.es ),
128
+ mainly in Institut Universitari de Ling��stica Aplicada of Universitat Pompeu Fabra ( http://www.iula.upf.es ),
122
129
  and also in bee.com.es ( http://bee.com.es ).
123
130
 
124
131
  It is free software, and may be redistributed under GPL license.
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53
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- <td>
58
- <a href="../files/lib/bn4r/bn_table_probabilities_rb.html">
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- lib/bn4r/bn_table_probabilities.rb
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- <br />
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- <a href="BnTableProbabilitiesGenerator.html">
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- BnTableProbabilitiesGenerator
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-
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-
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-
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-
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- <div id="description">
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- <p>
85
- Bayes Net Table Probabilities Generator from Positive Negative Relations
86
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-
88
- </div>
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-
90
-
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- </div>
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-
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-
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- <div class="name-list">
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- <a href="#M000023">get_node_probability_from_boolean_combination</a>&nbsp;&nbsp;
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- <a href="#M000022">table_probabilities_for_node</a>&nbsp;&nbsp;
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125
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126
- <span class="method-name">get_node_probability_from_boolean_combination</span><span class="method-args">(boolean_combination, type_of_position_impact)</span>
127
- </a>
128
- </div>
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-
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- <div class="method-description">
131
- <p>
132
- returns P(node=yes| parents={boolean_combination}) where parents have
133
- relations with the node showed in type_of_position_impact
134
- type_of_position_impact is a array of boolean values showing the relation (
135
- positive | negative ) beetwen the node and its parents.
136
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-
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- <h3 class="section-bar">Public Instance methods</h3>
141
-
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- <div id="method-M000022" class="method-detail">
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- <a name="M000022"></a>
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-
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148
- <span class="method-name">table_probabilities_for_node</span><span class="method-args">(node, type_of_position_impact)</span>
149
- </a>
150
- </div>
151
-
152
- <div class="method-description">
153
- <p>
154
- type_of_position_impact is a array of boolean values showing the relation (
155
- positive | negative ) beetwen the node and its parents.
156
- </p>
157
- </div>
158
- </div>
159
-
160
-
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- </div>
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-
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-
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- </div>
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-
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-
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- <div id="validator-badges">
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- <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
169
- </div>
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-
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- </body>
1
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+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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+ <html>
6
+ <head>
7
+ <title>Class: BNTPGFromPositiveNegativeRelations</title>
8
+ <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
9
+ <link rel="stylesheet" href=".././rdoc-style.css" type="text/css" media="screen" />
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+ </head>
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+
52
+ <body>
53
+ <table width="100%" border='0' cellpadding='0' cellspacing='0' class='banner'><tr>
54
+ <td class="file-title"><span class="file-title-prefix">Class</span><br />BNTPGFromPositiveNegativeRelations</td>
55
+ <td align="right">
56
+ <table cellspacing=0 cellpadding=2>
57
+ <tr valign="top">
58
+ <td>In:</td>
59
+ <td>
60
+ <a href="../files/lib/bn4r/bn_table_probabilities_rb.html">lib/bn4r/bn_table_probabilities.rb</a>
61
+ </td>
62
+ </tr>
63
+ <tr>
64
+ <td>Parent:</td>
65
+ <td>
66
+ <a href="BnTableProbabilitiesGenerator.html">
67
+ BnTableProbabilitiesGenerator
68
+ </a>
69
+ </td>
70
+ </tr>
71
+ </table>
72
+ </td>
73
+ </tr>
74
+ </table>
75
+ <!-- banner header -->
76
+
77
+ <div id="bodyContent">
78
+ <div id="content">
79
+
80
+ <div class="description"><p>
81
+ Bayes Net Table Probabilities Generator from Positive Negative Relations
82
+ </p>
83
+ </div>
84
+
85
+
86
+
87
+ <div class="sectiontitle">Methods</div>
88
+ <ul>
89
+ <li><a href="#M000032">get_node_probability_from_boolean_combination</a></li>
90
+ <li><a href="#M000031">table_probabilities_for_node</a></li>
91
+ </ul>
92
+
93
+
94
+
95
+
96
+
97
+
98
+ <div class="sectiontitle">Public Class methods</div>
99
+ <div class="method">
100
+ <div class="title">
101
+ <a name="M000032"></a><b>get_node_probability_from_boolean_combination</b>(boolean_combination, type_of_position_impact)
102
+ </div>
103
+ <div class="description">
104
+ <p>
105
+ returns P(node=yes| parents={boolean_combination}) where parents have
106
+ relations with the node showed in type_of_position_impact
107
+ type_of_position_impact is a array of boolean values showing the relation (
108
+ positive | negative ) beetwen the node and its parents.
109
+ </p>
110
+ </div>
111
+ <div class="sourcecode">
112
+ <p class="source-link">[ <a href="javascript:toggleSource('M000032_source')" id="l_M000032_source">show source</a> ]</p>
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+ <div id="M000032_source" class="dyn-source">
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+ <pre>
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+ <span class="ruby-comment cmt"># File lib/bn4r/bn_table_probabilities.rb, line 56</span>
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+ 56: <span class="ruby-keyword kw">def</span> <span class="ruby-keyword kw">self</span>.<span class="ruby-identifier">get_node_probability_from_boolean_combination</span>(<span class="ruby-identifier">boolean_combination</span>, <span class="ruby-identifier">type_of_position_impact</span>)
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+ 57: <span class="ruby-identifier">num_eq</span> = <span class="ruby-value">0</span><span class="ruby-value">.0</span>
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+ 58: <span class="ruby-identifier">boolean_combination</span>.<span class="ruby-identifier">size</span>.<span class="ruby-identifier">times</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">i</span><span class="ruby-operator">|</span>
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+ 59: <span class="ruby-identifier">num_eq</span> <span class="ruby-operator">+=</span> <span class="ruby-value">1.0</span> <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">type_of_position_impact</span>[<span class="ruby-identifier">i</span>] <span class="ruby-operator">&amp;&amp;</span> <span class="ruby-identifier">boolean_combination</span>[<span class="ruby-identifier">i</span>]
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+ 60: <span class="ruby-identifier">num_eq</span> <span class="ruby-operator">+=</span> <span class="ruby-value">1.0</span> <span class="ruby-keyword kw">if</span> <span class="ruby-operator">!</span><span class="ruby-identifier">type_of_position_impact</span>[<span class="ruby-identifier">i</span>] <span class="ruby-operator">&amp;&amp;</span> <span class="ruby-operator">!</span><span class="ruby-identifier">boolean_combination</span>[<span class="ruby-identifier">i</span>]
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+ 61: }
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+ 62: <span class="ruby-identifier">num_eq</span> <span class="ruby-operator">/</span> <span class="ruby-identifier">boolean_combination</span>.<span class="ruby-identifier">size</span>.<span class="ruby-identifier">to_f</span>
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+ 63: <span class="ruby-keyword kw">end</span>
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+ </pre>
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+ </div>
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+ </div>
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+ </div>
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+ <div class="sectiontitle">Public Instance methods</div>
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+ <div class="method">
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+ <div class="title">
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+ <a name="M000031"></a><b>table_probabilities_for_node</b>(node, type_of_position_impact)
132
+ </div>
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+ <div class="description">
134
+ <p>
135
+ type_of_position_impact is a array of boolean values showing the relation (
136
+ positive | negative ) beetwen the node and its parents.
137
+ </p>
138
+ </div>
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+ <div class="sourcecode">
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+ <p class="source-link">[ <a href="javascript:toggleSource('M000031_source')" id="l_M000031_source">show source</a> ]</p>
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+ <div id="M000031_source" class="dyn-source">
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+ <pre>
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+ <span class="ruby-comment cmt"># File lib/bn4r/bn_table_probabilities.rb, line 25</span>
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+ 25: <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">table_probabilities_for_node</span>(<span class="ruby-identifier">node</span>, <span class="ruby-identifier">type_of_position_impact</span>)
145
+ 26: <span class="ruby-identifier">raise</span> <span class="ruby-value str">&quot;Node parents and type_of_position_impact with different size&quot;</span> <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">node</span>.<span class="ruby-identifier">parents</span>.<span class="ruby-identifier">size</span> <span class="ruby-operator">!=</span> <span class="ruby-identifier">type_of_position_impact</span>.<span class="ruby-identifier">size</span>
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+ 27: <span class="ruby-identifier">boolean_combinations</span> = []
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+ 28: (<span class="ruby-value">2</span><span class="ruby-operator">**</span><span class="ruby-identifier">node</span>.<span class="ruby-identifier">parents</span>.<span class="ruby-identifier">size</span>).<span class="ruby-identifier">times</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">i</span><span class="ruby-operator">|</span>
148
+ 29: <span class="ruby-identifier">boolean_combination</span> = <span class="ruby-constant">Array</span>.<span class="ruby-identifier">new</span>(<span class="ruby-identifier">node</span>.<span class="ruby-identifier">parents</span>.<span class="ruby-identifier">size</span>, <span class="ruby-keyword kw">false</span>)
149
+ 30: <span class="ruby-identifier">actual_value</span> = <span class="ruby-identifier">i</span>
150
+ 31: (<span class="ruby-identifier">node</span>.<span class="ruby-identifier">parents</span>.<span class="ruby-identifier">size</span>).<span class="ruby-identifier">times</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">j</span><span class="ruby-operator">|</span>
151
+ 32: <span class="ruby-identifier">boolean_combination</span>[<span class="ruby-identifier">j</span>] = <span class="ruby-operator">!</span>(<span class="ruby-identifier">actual_value</span><span class="ruby-operator">%</span><span class="ruby-value">2</span> <span class="ruby-operator">==</span> <span class="ruby-value">0</span>)
152
+ 33: <span class="ruby-identifier">actual_value</span> = <span class="ruby-identifier">actual_value</span> <span class="ruby-operator">/</span> <span class="ruby-value">2</span>
153
+ 34: }
154
+ 35: <span class="ruby-identifier">boolean_combinations</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-identifier">boolean_combination</span>
155
+ 36: }
156
+ 37: <span class="ruby-comment cmt">#p boolean_combinations
157
+ 38: <span class="ruby-identifier">table_probabilities</span> = [] <span class="ruby-comment cmt"># Array.new(2**(node.parents.size+1))
158
+ 39: <span class="ruby-identifier">boolean_combinations</span>.<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">boolean_combination</span><span class="ruby-operator">|</span>
159
+ 40: [<span class="ruby-keyword kw">true</span>,<span class="ruby-keyword kw">false</span>].<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">node_value</span><span class="ruby-operator">|</span>
160
+ 41: <span class="ruby-identifier">prob</span> = <span class="ruby-constant">BNTPGFromPositiveNegativeRelations</span>.<span class="ruby-identifier">get_node_probability_from_boolean_combination</span>(<span class="ruby-identifier">boolean_combination</span>, <span class="ruby-identifier">type_of_position_impact</span>)
161
+ 42: <span class="ruby-identifier">prob</span> = <span class="ruby-value">1</span> <span class="ruby-operator">-</span> <span class="ruby-identifier">prob</span> <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">node_value</span> <span class="ruby-operator">==</span> <span class="ruby-keyword kw">false</span>
162
+ 43: <span class="ruby-identifier">table_probabilities</span>[<span class="ruby-identifier">node</span>.<span class="ruby-identifier">get_table_index</span>(<span class="ruby-identifier">node_value</span>, <span class="ruby-identifier">boolean_combination</span>)] = <span class="ruby-identifier">prob</span>
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+ 44: <span class="ruby-comment cmt">#p &quot;pos :&quot; + node.get_table_index(node_value, boolean_combination).to_s
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+ 45: <span class="ruby-comment cmt">#p &quot;Ok :&quot; + node.get_table_index(node_value, boolean_combination).to_s if node.get_table_index(node_value, boolean_combination) &gt; 2**node.parents.size
165
+ 46: }
166
+ 47: }
167
+ 48: <span class="ruby-comment cmt">#p table_probabilities
168
+ 49: <span class="ruby-identifier">table_probabilities</span>
169
+ 50: <span class="ruby-keyword kw">end</span>
170
+ </pre>
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+ </div>
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+ </div>
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+ </div>
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+ </div>
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+
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+ </div>
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+
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+ <script src="http://www.google-analytics.com/urchin.js" type="text/javascript">
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+ </script>
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+ <script type="text/javascript">
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+ _uacct = "UA-262540-7";
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+ urchinTracker();
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+ </script>
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+ </body>
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  </html>
data/doc/classes/BNTPGFromPositiveNegativeRelations.src/M000031.html CHANGED
@@ -1,16 +1,16 @@
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- <body class="standalone-code">
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- <pre><span class="ruby-comment cmt"># File lib/bn4r/bn_table_probabilities.rb, line 25</span>
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+ <?xml version="1.0" encoding="iso-8859-1"?>
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+ <head>
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+ <title>table_probabilities_for_node (BNTPGFromPositiveNegativeRelations)</title>
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+ <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
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+ <link rel="stylesheet" href="../.././rdoc-style.css" type="text/css" media="screen" />
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+ </head>
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+ <body class="standalone-code">
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+ <pre><span class="ruby-comment cmt"># File lib/bn4r/bn_table_probabilities.rb, line 25</span>
14
14
  <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">table_probabilities_for_node</span>(<span class="ruby-identifier">node</span>, <span class="ruby-identifier">type_of_position_impact</span>)
15
15
  <span class="ruby-identifier">raise</span> <span class="ruby-value str">&quot;Node parents and type_of_position_impact with different size&quot;</span> <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">node</span>.<span class="ruby-identifier">parents</span>.<span class="ruby-identifier">size</span> <span class="ruby-operator">!=</span> <span class="ruby-identifier">type_of_position_impact</span>.<span class="ruby-identifier">size</span>
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  <span class="ruby-identifier">boolean_combinations</span> = []
@@ -23,19 +23,19 @@
23
23
  }
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24
  <span class="ruby-identifier">boolean_combinations</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-identifier">boolean_combination</span>
25
25
  }
26
- <span class="ruby-comment cmt">#p boolean_combinations</span>
27
- <span class="ruby-identifier">table_probabilities</span> = [] <span class="ruby-comment cmt"># Array.new(2**(node.parents.size+1))</span>
26
+ <span class="ruby-comment cmt">#p boolean_combinations
27
+ <span class="ruby-identifier">table_probabilities</span> = [] <span class="ruby-comment cmt"># Array.new(2**(node.parents.size+1))
28
28
  <span class="ruby-identifier">boolean_combinations</span>.<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">boolean_combination</span><span class="ruby-operator">|</span>
29
29
  [<span class="ruby-keyword kw">true</span>,<span class="ruby-keyword kw">false</span>].<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">node_value</span><span class="ruby-operator">|</span>
30
30
  <span class="ruby-identifier">prob</span> = <span class="ruby-constant">BNTPGFromPositiveNegativeRelations</span>.<span class="ruby-identifier">get_node_probability_from_boolean_combination</span>(<span class="ruby-identifier">boolean_combination</span>, <span class="ruby-identifier">type_of_position_impact</span>)
31
31
  <span class="ruby-identifier">prob</span> = <span class="ruby-value">1</span> <span class="ruby-operator">-</span> <span class="ruby-identifier">prob</span> <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">node_value</span> <span class="ruby-operator">==</span> <span class="ruby-keyword kw">false</span>
32
32
  <span class="ruby-identifier">table_probabilities</span>[<span class="ruby-identifier">node</span>.<span class="ruby-identifier">get_table_index</span>(<span class="ruby-identifier">node_value</span>, <span class="ruby-identifier">boolean_combination</span>)] = <span class="ruby-identifier">prob</span>
33
- <span class="ruby-comment cmt">#p &quot;pos :&quot; + node.get_table_index(node_value, boolean_combination).to_s</span>
34
- <span class="ruby-comment cmt">#p &quot;Ok :&quot; + node.get_table_index(node_value, boolean_combination).to_s if node.get_table_index(node_value, boolean_combination) &gt; 2**node.parents.size</span>
33
+ <span class="ruby-comment cmt">#p &quot;pos :&quot; + node.get_table_index(node_value, boolean_combination).to_s
34
+ <span class="ruby-comment cmt">#p &quot;Ok :&quot; + node.get_table_index(node_value, boolean_combination).to_s if node.get_table_index(node_value, boolean_combination) &gt; 2**node.parents.size
35
35
  }
36
36
  }
37
- <span class="ruby-comment cmt">#p table_probabilities</span>
37
+ <span class="ruby-comment cmt">#p table_probabilities
38
38
  <span class="ruby-identifier">table_probabilities</span>
39
- <span class="ruby-keyword kw">end</span></pre>
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- </body>
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+ <span class="ruby-keyword kw">end</span></pre>
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+ </body>
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  </html>