bn4r 0.1.0 → 0.1.2

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Files changed (433) hide show
  1. data/CHANGELOG +12 -0
  2. data/README +71 -5
  3. data/doc/classes/BNTPGFromPositiveNegativeRelations.html +172 -0
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data/test/dog-problem.bif ADDED
@@ -0,0 +1,106 @@
1
+ <?xml version="1.0" encoding="US-ASCII"?>
2
+
3
+
4
+ <!--
5
+ Bayesian network in XMLBIF v0.3 (BayesNet Interchange Format)
6
+ Produced by JavaBayes (http://www.cs.cmu.edu/~javabayes/
7
+ Output created Wed Aug 12 21:16:40 GMT+01:00 1998
8
+ -->
9
+
10
+
11
+
12
+ <!-- DTD for the XMLBIF 0.3 format -->
13
+ <!DOCTYPE BIF [
14
+ <!ELEMENT BIF ( NETWORK )*>
15
+ <!ATTLIST BIF VERSION CDATA #REQUIRED>
16
+ <!ELEMENT NETWORK ( NAME, ( PROPERTY | VARIABLE | DEFINITION )* )>
17
+ <!ELEMENT NAME (#PCDATA)>
18
+ <!ELEMENT VARIABLE ( NAME, ( OUTCOME | PROPERTY )* ) >
19
+ <!ATTLIST VARIABLE TYPE (nature|decision|utility) "nature">
20
+ <!ELEMENT OUTCOME (#PCDATA)>
21
+ <!ELEMENT DEFINITION ( FOR | GIVEN | TABLE | PROPERTY )* >
22
+ <!ELEMENT FOR (#PCDATA)>
23
+ <!ELEMENT GIVEN (#PCDATA)>
24
+ <!ELEMENT TABLE (#PCDATA)>
25
+ <!ELEMENT PROPERTY (#PCDATA)>
26
+ ]>
27
+
28
+
29
+ <BIF VERSION="0.3">
30
+ <NETWORK>
31
+ <NAME>Dog-Problem</NAME>
32
+
33
+ <!-- Variables -->
34
+ <VARIABLE TYPE="nature">
35
+ <NAME>light-on</NAME>
36
+ <OUTCOME>true</OUTCOME>
37
+ <OUTCOME>false</OUTCOME>
38
+ <PROPERTY>position = (73, 165)</PROPERTY>
39
+ </VARIABLE>
40
+
41
+ <VARIABLE TYPE="nature">
42
+ <NAME>bowel-problem</NAME>
43
+ <OUTCOME>true</OUTCOME>
44
+ <OUTCOME>false</OUTCOME>
45
+ <PROPERTY>position = (190, 69)</PROPERTY>
46
+ </VARIABLE>
47
+
48
+ <VARIABLE TYPE="nature">
49
+ <NAME>dog-out</NAME>
50
+ <OUTCOME>true</OUTCOME>
51
+ <OUTCOME>false</OUTCOME>
52
+ <PROPERTY>position = (155, 165)</PROPERTY>
53
+ </VARIABLE>
54
+
55
+ <VARIABLE TYPE="nature">
56
+ <NAME>hear-bark</NAME>
57
+ <OUTCOME>true</OUTCOME>
58
+ <OUTCOME>false</OUTCOME>
59
+ <PROPERTY>position = (154, 241)</PROPERTY>
60
+ </VARIABLE>
61
+
62
+ <VARIABLE TYPE="nature">
63
+ <NAME>family-out</NAME>
64
+ <OUTCOME>true</OUTCOME>
65
+ <OUTCOME>false</OUTCOME>
66
+ <PROPERTY>position = (112, 69)</PROPERTY>
67
+ </VARIABLE>
68
+
69
+
70
+ <!-- Probability distributions -->
71
+ <DEFINITION>
72
+ <FOR>bowel-problem</FOR>
73
+ <TABLE>0.01 0.99 </TABLE>
74
+ </DEFINITION>
75
+
76
+ <DEFINITION>
77
+ <FOR>light-on</FOR>
78
+ <GIVEN>family-out</GIVEN>
79
+ <TABLE>0.6 0.4 0.05 0.95 </TABLE>
80
+ </DEFINITION>
81
+
82
+
83
+ <DEFINITION>
84
+ <FOR>dog-out</FOR>
85
+ <GIVEN>bowel-problem</GIVEN>
86
+ <GIVEN>family-out</GIVEN>
87
+ <TABLE>0.99 0.01
88
+ 0.97 0.03
89
+ 0.9 0.1
90
+ 0.3 0.7 </TABLE>
91
+ </DEFINITION>
92
+
93
+ <DEFINITION>
94
+ <FOR>hear-bark</FOR>
95
+ <GIVEN>dog-out</GIVEN>
96
+ <TABLE>0.7 0.3 0.01 0.99 </TABLE>
97
+ </DEFINITION>
98
+
99
+ <DEFINITION>
100
+ <FOR>family-out</FOR>
101
+ <TABLE>0.15 0.85 </TABLE>
102
+ </DEFINITION>
103
+
104
+
105
+ </NETWORK>
106
+ </BIF>
data/test/print_bn_output.rb ADDED
@@ -0,0 +1,11 @@
1
+ require File.dirname(__FILE__) + '/../lib/bn4r'
2
+ require 'bn_test_models'
3
+
4
+ def main
5
+ # bn = BayesNet.new.create_from_xmlbif("dog-problem.bif")
6
+ bn = bayes_net_aima
7
+ # print "Created bn"
8
+ print bn.to_xbn
9
+ end
10
+
11
+ main
metadata CHANGED
@@ -3,8 +3,8 @@ rubygems_version: 0.8.11
3
3
  specification_version: 1
4
4
  name: bn4r
5
5
  version: !ruby/object:Gem::Version
6
- version: 0.1.0
7
- date: 2006-10-31 00:00:00 +01:00
6
+ version: 0.1.2
7
+ date: 2006-11-10 00:00:00 +01:00
8
8
  summary: bn4r is a bayesian networks library on ruby that provides the user with classes for create bayesian networks and diverse algorithms for solve them.
9
9
  require_paths:
10
10
  - lib
@@ -31,14 +31,477 @@ files:
31
31
  - README
32
32
  - CHANGELOG
33
33
  - Rakefile
34
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35
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36
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+ - doc/classes/FileOperations.src/M000306.html
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+ - doc/classes/Errno/ENOTEMPTY.html
34
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  - test/test_helper.rb
35
493
  - test/bn4r_test.rb
494
+ - test/print_bn_output.rb
495
+ - test/bn_test_models.rb
496
+ - test/dog-problem.bif
36
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  - lib/bn4r
37
498
  - lib/bn4r.rb
38
499
  - lib/bn4r/version.rb
39
500
  - lib/bn4r/bn.rb
40
501
  - lib/bn4r/bn_table_probabilities.rb
41
502
  - lib/bn4r/bn_algorithms.rb
503
+ - lib/bn4r/bn_export.rb
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+ - lib/bn4r/bn_import.rb
42
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  test_files: []
43
506
 
44
507
  rdoc_options: