vispy 0.15.0__cp312-cp312-macosx_10_13_x86_64.whl

vispy/plot/plotwidget.py

@@ -0,0 +1,522 @@
+# -*- coding: utf-8 -*-
+# Copyright (c) Vispy Development Team. All Rights Reserved.
+# Distributed under the (new) BSD License. See LICENSE.txt for more info.
+
+from ..import scene
+from ..io import read_mesh
+from ..geometry import MeshData
+
+__all__ = ['PlotWidget']
+
+
+class PlotWidget(scene.Widget):
+    """Widget to facilitate plotting
+
+    Parameters
+    ----------
+    *args : arguments
+        Arguments passed to the `ViewBox` super class.
+    **kwargs : keywoard arguments
+        Keyword arguments passed to the `ViewBox` super class.
+
+    Notes
+    -----
+    This class is typically instantiated implicitly by a `Figure`
+    instance, e.g., by doing ``fig[0, 0]``.
+    """
+
+    def __init__(self, *args, **kwargs):
+        self._fg = kwargs.pop('fg_color', 'k')
+        self.grid = None
+        self.camera = None
+        self.title = None
+        self.title_widget = None
+        self.yaxis = None
+        self.xaxis = None
+        self.xlabel = None
+        self.ylabel = None
+        self._configured = False
+        self.visuals = []
+        self.section_y_x = None
+
+        self.cbar_top = None
+        self.cbar_bottom = None
+        self.cbar_left = None
+        self.cbar_right = None
+
+        super(PlotWidget, self).__init__(*args, **kwargs)
+        self.grid = self.add_grid(spacing=0, margin=10)
+
+        self.title = scene.Label("", font_size=16, color="#ff0000")
+
+    def _configure_2d(self, fg_color=None):
+        if self._configured:
+            return
+
+        if fg_color is None:
+            fg = self._fg
+        else:
+            fg = fg_color
+
+        #     c0        c1      c2      c3      c4      c5         c6
+        #  r0 +---------+-------+-------+-------+-------+---------+---------+
+        #     |         |                       | title |         |         |
+        #  r1 |         +-----------------------+-------+---------+         |
+        #     |         |                       | cbar  |         |         |
+        #  r2 |         +-------+-------+-------+-------+---------+         |
+        #     |         | cbar  | ylabel| yaxis |  view | cbar    | padding |
+        #  r3 | padding +-------+-------+-------+-------+---------+         |
+        #     |         |                       | xaxis |         |         |
+        #  r4 |         +-----------------------+-------+---------+         |
+        #     |         |                       | xlabel|         |         |
+        #  r5 |         +-----------------------+-------+---------+         |
+        #     |         |                       | cbar  |         |         |
+        #  r6 |---------+-----------------------+-------+---------+---------|
+        #     |                           padding                           |
+        #     +---------+-----------------------+-------+---------+---------+
+
+        # padding left
+        padding_left = self.grid.add_widget(None, row=0, row_span=5, col=0)
+        padding_left.width_min = 30
+        padding_left.width_max = 60
+
+        # padding right
+        padding_right = self.grid.add_widget(None, row=0, row_span=5, col=6)
+        padding_right.width_min = 30
+        padding_right.width_max = 60
+
+        # padding right
+        padding_bottom = self.grid.add_widget(None, row=6, col=0, col_span=6)
+        padding_bottom.height_min = 20
+        padding_bottom.height_max = 40
+
+        # row 0
+        # title - column 4 to 5
+        self.title_widget = self.grid.add_widget(self.title, row=0, col=4)
+        self.title_widget.height_min = self.title_widget.height_max = 40
+
+        # row 1
+        # colorbar - column 4 to 5
+        self.cbar_top = self.grid.add_widget(None, row=1, col=4)
+        self.cbar_top.height_max = 1
+
+        # row 2
+        # colorbar_left - column 1
+        # ylabel - column 2
+        # yaxis - column 3
+        # view - column 4
+        # colorbar_right - column 5
+        self.cbar_left = self.grid.add_widget(None, row=2, col=1)
+        self.cbar_left.width_max = 1
+
+        self.ylabel = scene.Label("", rotation=-90)
+        ylabel_widget = self.grid.add_widget(self.ylabel, row=2, col=2)
+        ylabel_widget.width_max = 1
+
+        self.yaxis = scene.AxisWidget(orientation='left',
+                                      text_color=fg,
+                                      axis_color=fg, tick_color=fg)
+
+        yaxis_widget = self.grid.add_widget(self.yaxis, row=2, col=3)
+        yaxis_widget.width_max = 40
+
+        # row 3
+        # xaxis - column 4
+        self.xaxis = scene.AxisWidget(orientation='bottom', text_color=fg,
+                                      axis_color=fg, tick_color=fg)
+        xaxis_widget = self.grid.add_widget(self.xaxis, row=3, col=4)
+        xaxis_widget.height_max = 40
+
+        self.cbar_right = self.grid.add_widget(None, row=2, col=5)
+        self.cbar_right.width_max = 1
+
+        # row 4
+        # xlabel - column 4
+        self.xlabel = scene.Label("")
+        xlabel_widget = self.grid.add_widget(self.xlabel, row=4, col=4)
+        xlabel_widget.height_max = 40
+
+        # row 5
+        self.cbar_bottom = self.grid.add_widget(None, row=5, col=4)
+        self.cbar_bottom.height_max = 1
+
+        # This needs to be added to the grid last (to fix #1742)
+        self.view = self.grid.add_view(row=2, col=4,
+                                       border_color='grey', bgcolor="#efefef")
+        self.view.camera = 'panzoom'
+        self.camera = self.view.camera
+
+        self._configured = True
+        self.xaxis.link_view(self.view)
+        self.yaxis.link_view(self.view)
+
+    def _configure_3d(self):
+        if self._configured:
+            return
+
+        self.view = self.grid.add_view(row=0, col=0,
+                                       border_color='grey', bgcolor="#efefef")
+
+        self.view.camera = 'turntable'
+        self.camera = self.view.camera
+
+        self._configured = True
+
+    def histogram(self, data, bins=10, color='w', orientation='h'):
+        """Calculate and show a histogram of data
+
+        Parameters
+        ----------
+        data : array-like
+            Data to histogram. Currently only 1D data is supported.
+        bins : int | array-like
+            Number of bins, or bin edges.
+        color : instance of Color
+            Color of the histogram.
+        orientation : {'h', 'v'}
+            Orientation of the histogram.
+
+        Returns
+        -------
+        hist : instance of Polygon
+            The histogram polygon.
+        """
+        self._configure_2d()
+        hist = scene.Histogram(data, bins, color, orientation)
+        self.view.add(hist)
+        self.view.camera.set_range()
+        return hist
+
+    def image(self, data, cmap='cubehelix', clim='auto', fg_color=None, **kwargs):
+        """Show an image
+
+        Parameters
+        ----------
+        data : ndarray
+            Should have shape (N, M), (N, M, 3) or (N, M, 4).
+        cmap : str
+            Colormap name.
+        clim : str | tuple
+            Colormap limits. Should be ``'auto'`` or a two-element tuple of
+            min and max values.
+        fg_color : Color or None
+            Sets the plot foreground color if specified.
+        kwargs : keyword arguments.
+            More args to pass to :class:`~vispy.visuals.image.Image`.
+
+        Returns
+        -------
+        image : instance of Image
+            The image.
+
+        Notes
+        -----
+        The colormap is only used if the image pixels are scalars.
+        """
+        self._configure_2d(fg_color)
+        image = scene.Image(data, cmap=cmap, clim=clim, **kwargs)
+        self.view.add(image)
+        self.view.camera.aspect = 1
+        self.view.camera.set_range()
+
+        return image
+
+    def mesh(self, vertices=None, faces=None, vertex_colors=None,
+             face_colors=None, color=(0.5, 0.5, 1.), fname=None,
+             meshdata=None, shading='auto'):
+        """Show a 3D mesh
+
+        Parameters
+        ----------
+        vertices : array
+            Vertices.
+        faces : array | None
+            Face definitions.
+        vertex_colors : array | None
+            Vertex colors.
+        face_colors : array | None
+            Face colors.
+        color : instance of Color
+            Color to use.
+        fname : str | None
+            Filename to load. If not None, then vertices, faces, and meshdata
+            must be None.
+        meshdata : MeshData | None
+            Meshdata to use. If not None, then vertices, faces, and fname
+            must be None.
+        shading : str
+            Shading to use, can be None, 'smooth', 'flat', or 'auto'.
+            Default ('auto') will use None if face_colors is set, and
+            'smooth' otherwise.
+
+        Returns
+        -------
+        mesh : instance of Mesh
+            The mesh.
+        """
+        self._configure_3d()
+        if shading == 'auto':
+            shading = 'smooth'
+            if face_colors is not None:
+                shading = None
+        if fname is not None:
+            if not all(x is None for x in (vertices, faces, meshdata)):
+                raise ValueError('vertices, faces, and meshdata must be None '
+                                 'if fname is not None')
+            vertices, faces = read_mesh(fname)[:2]
+        if meshdata is not None:
+            if not all(x is None for x in (vertices, faces, fname)):
+                raise ValueError('vertices, faces, and fname must be None if '
+                                 'meshdata is not None')
+        else:
+            meshdata = MeshData(vertices, faces, vertex_colors=vertex_colors,
+                                face_colors=face_colors)
+        mesh = scene.Mesh(meshdata=meshdata, vertex_colors=vertex_colors,
+                          face_colors=face_colors, color=color,
+                          shading=shading)
+        self.view.add(mesh)
+        self.view.camera.set_range()
+        return mesh
+
+    def plot(self, data, color='k', symbol=None, line_kind='-', width=1.,
+             marker_size=10., edge_color='k', face_color='b', edge_width=1.,
+             title=None, xlabel=None, ylabel=None, connect='strip'):
+        """Plot a series of data using lines and markers
+
+        Parameters
+        ----------
+        data : array | two arrays
+            Arguments can be passed as ``(Y,)``, ``(X, Y)`` or
+            ``np.array((X, Y))``.
+        color : instance of Color
+            Color of the line.
+        symbol : str
+            Marker symbol to use.
+        line_kind : str
+            Kind of line to draw. For now, only solid lines (``'-'``)
+            are supported.
+        width : float
+            Line width.
+        marker_size : float
+            Marker size. If `size == 0` markers will not be shown.
+        edge_color : instance of Color
+            Color of the marker edge.
+        face_color : instance of Color
+            Color of the marker face.
+        edge_width : float
+            Edge width of the marker.
+        title : str | None
+            The title string to be displayed above the plot
+        xlabel : str | None
+            The label to display along the bottom axis
+        ylabel : str | None
+            The label to display along the left axis.
+        connect : str | array
+            Determines which vertices are connected by lines.
+
+        Returns
+        -------
+        line : instance of LinePlot
+            The line plot.
+
+        See also
+        --------
+        LinePlot
+        """
+        self._configure_2d()
+        line = scene.LinePlot(data, connect=connect, color=color,
+                              symbol=symbol, line_kind=line_kind,
+                              width=width, marker_size=marker_size,
+                              edge_color=edge_color,
+                              face_color=face_color,
+                              edge_width=edge_width)
+        self.view.add(line)
+        self.view.camera.set_range()
+        self.visuals.append(line)
+
+        if title is not None:
+            self.title.text = title
+        if xlabel is not None:
+            self.xlabel.text = xlabel
+        if ylabel is not None:
+            self.ylabel.text = ylabel
+
+        return line
+
+    def spectrogram(self, x, n_fft=256, step=None, fs=1., window='hann',
+                    normalize=False, color_scale='log', cmap='cubehelix',
+                    clim='auto'):
+        """Calculate and show a spectrogram
+
+        Parameters
+        ----------
+        x : array-like
+            1D signal to operate on. ``If len(x) < n_fft``, x will be
+            zero-padded to length ``n_fft``.
+        n_fft : int
+            Number of FFT points. Much faster for powers of two.
+        step : int | None
+            Step size between calculations. If None, ``n_fft // 2``
+            will be used.
+        fs : float
+            The sample rate of the data.
+        window : str | None
+            Window function to use. Can be ``'hann'`` for Hann window, or None
+            for no windowing.
+        normalize : bool
+            Normalization of spectrogram values across frequencies.
+        color_scale : {'linear', 'log'}
+            Scale to apply to the result of the STFT.
+            ``'log'`` will use ``10 * log10(power)``.
+        cmap : str
+            Colormap name.
+        clim : str | tuple
+            Colormap limits. Should be ``'auto'`` or a two-element tuple of
+            min and max values.
+
+        Returns
+        -------
+        spec : instance of Spectrogram
+            The spectrogram.
+
+        See also
+        --------
+        Image
+        """
+        self._configure_2d()
+        # XXX once we have axes, we should use "fft_freqs", too
+        spec = scene.Spectrogram(x, n_fft, step, fs, window,
+                                 normalize, color_scale, cmap, clim)
+        self.view.add(spec)
+        self.view.camera.set_range()
+        return spec
+
+    def volume(self, vol, clim=None, method='mip', threshold=None,
+               cmap='grays', **kwargs):
+        """Show a 3D volume
+
+        Parameters
+        ----------
+        vol : ndarray
+            Volume to render.
+        clim : tuple of two floats | None
+            The contrast limits. The values in the volume are mapped to
+            black and white corresponding to these values. Default maps
+            between min and max.
+        method : {'mip', 'iso', 'translucent', 'additive'}
+            The render style to use. See corresponding docs for details.
+            Default 'mip'.
+        threshold : float
+            The threshold to use for the isosurafce render style. By default
+            the mean of the given volume is used.
+        cmap : str
+            The colormap to use.
+        kwargs : keyword arguments.
+            More args to pass to :class:`~vispy.visuals.volume.Volume`.
+
+        Returns
+        -------
+        volume : instance of Volume
+            The volume visualization.
+
+        See also
+        --------
+        Volume
+        """
+        self._configure_3d()
+        volume = scene.Volume(vol, clim, method, threshold, cmap=cmap, **kwargs)
+        self.view.add(volume)
+        self.view.camera.set_range()
+        return volume
+
+    def surface(self, zdata, **kwargs):
+        """Show a 3D surface plot.
+
+        Extra keyword arguments are passed to `SurfacePlot()`.
+
+        Parameters
+        ----------
+        zdata : array-like
+            A 2D array of the surface Z values.
+
+        """
+        self._configure_3d()
+        surf = scene.SurfacePlot(z=zdata, **kwargs)
+        self.view.add(surf)
+        self.view.camera.set_range()
+        return surf
+
+    def colorbar(self, cmap, position="right",
+                 label="", clim=("", ""),
+                 border_width=0.0, border_color="black",
+                 **kwargs):
+        """Show a ColorBar
+
+        Parameters
+        ----------
+        cmap : str | vispy.color.ColorMap
+            Either the name of the ColorMap to be used from the standard
+            set of names (refer to `vispy.color.get_colormap`),
+            or a custom ColorMap object.
+            The ColorMap is used to apply a gradient on the colorbar.
+        position : {'left', 'right', 'top', 'bottom'}
+            The position of the colorbar with respect to the plot.
+            'top' and 'bottom' are placed horizontally, while
+            'left' and 'right' are placed vertically
+        label : str
+            The label that is to be drawn with the colorbar
+            that provides information about the colorbar.
+        clim : tuple (min, max)
+            the minimum and maximum values of the data that
+            is given to the colorbar. This is used to draw the scale
+            on the side of the colorbar.
+        border_width : float (in px)
+            The width of the border the colormap should have. This measurement
+            is given in pixels
+        border_color : str | vispy.color.Color
+            The color of the border of the colormap. This can either be a
+            str as the color's name or an actual instace of a vipy.color.Color
+
+        Returns
+        -------
+        colorbar : instance of ColorBarWidget
+
+        See also
+        --------
+        ColorBarWidget
+        """
+        self._configure_2d()
+
+        cbar = scene.ColorBarWidget(orientation=position,
+                                    label=label,
+                                    cmap=cmap,
+                                    clim=clim,
+                                    border_width=border_width,
+                                    border_color=border_color,
+                                    **kwargs)
+
+        CBAR_LONG_DIM = 50
+
+        if cbar.orientation == "bottom":
+            self.grid.remove_widget(self.cbar_bottom)
+            self.cbar_bottom = self.grid.add_widget(cbar, row=5, col=4)
+            self.cbar_bottom.height_max = \
+                self.cbar_bottom.height_max = CBAR_LONG_DIM
+
+        elif cbar.orientation == "top":
+            self.grid.remove_widget(self.cbar_top)
+            self.cbar_top = self.grid.add_widget(cbar, row=1, col=4)
+            self.cbar_top.height_max = self.cbar_top.height_max = CBAR_LONG_DIM
+
+        elif cbar.orientation == "left":
+            self.grid.remove_widget(self.cbar_left)
+            self.cbar_left = self.grid.add_widget(cbar, row=2, col=1)
+            self.cbar_left.width_max = self.cbar_left.width_min = CBAR_LONG_DIM
+
+        else:  # cbar.orientation == "right"
+            self.grid.remove_widget(self.cbar_right)
+            self.cbar_right = self.grid.add_widget(cbar, row=2, col=5)
+            self.cbar_right.width_max = \
+                self.cbar_right.width_min = CBAR_LONG_DIM
+
+        return cbar

vispy/plot/tests/test_plot.py

@@ -0,0 +1,46 @@
+# -*- coding: utf-8 -*-
+# Copyright (c) Vispy Development Team. All Rights Reserved.
+# Distributed under the (new) BSD License. See LICENSE.txt for more info.
+
+import vispy.plot as vp
+from vispy.testing import (assert_raises, requires_application,
+                           run_tests_if_main)
+from vispy.visuals.axis import AxisVisual
+from unittest import mock
+
+
+@requires_application()
+def test_figure_creation():
+    """Test creating a figure"""
+    with vp.Fig(show=False) as fig:
+        fig[0, 0:2]
+        fig[1:3, 0:2]
+        ax_right = fig[1:3, 2]
+        assert fig[1:3, 2] is ax_right
+        # collision
+        assert_raises(ValueError, fig.__getitem__, (slice(1, 3), 1))
+
+
+@requires_application()
+def test_plot_widget_axes():
+    """Test that the axes domains are updated correctly when a figure is first drawn"""
+    fig = vp.Fig(size=(800, 800), show=False)
+    point = (0, 100)
+    fig[0, 0].plot((point, point))
+    # mocking the AxisVisual domain.setter
+    domain_setter = mock.Mock(wraps=AxisVisual.domain.fset)
+    mock_property = AxisVisual.domain.setter(domain_setter)
+
+    with mock.patch.object(AxisVisual, "domain", mock_property):
+        # note: fig.show() must be called for this test to work... otherwise
+        # Grid._update_child_widget_dim is not triggered and the axes aren't updated
+        fig.show(run=False)
+        # currently, the AxisWidget adds a buffer of 5% of the
+        # full range to either end of the axis domain
+        buffer = (point[1] - point[0]) * 0.05
+        expectation = [point[0] - buffer, point[1] + buffer]
+        for call in domain_setter.call_args_list:
+            assert [round(x, 2) for x in call[0][1]] == expectation
+
+
+run_tests_if_main()

vispy/scene/__init__.py

@@ -0,0 +1,43 @@
+# -*- coding: utf-8 -*-
+# Copyright (c) Vispy Development Team. All Rights Reserved.
+# Distributed under the (new) BSD License. See LICENSE.txt for more info.
+"""
+The vispy.scene subpackage provides high-level, flexible, and easy to use
+functionality for creating scenes composed of multiple visual objects. 
+
+Overview
+--------
+
+Scenegraphs are a commonly used system for describing a scene as a 
+hierarchy of visual objects. Users need only create these visual objects and 
+specify their location in the scene, and the scenegraph system will 
+automatically draw the entire scene whenever an update is required.
+
+Using the vispy scenegraph requires only a few steps:
+
+1. Create a SceneCanvas to display the scene. This object has a `scene` 
+   property that is the top-level Node in the scene.
+2. Create one or more Node instances (see vispy.scene.visuals)
+3. Add these Node instances to the scene by making them children of 
+   canvas.scene, or children of other nodes that are already in the scene.
+
+
+For more information see:
+
+* complete scenegraph documentation
+* scene examples
+* scene API reference
+
+"""
+
+from .visuals import *  # noqa
+from .cameras import *  # noqa
+from ..visuals.transforms import *  # noqa
+from .widgets import *  # noqa
+from .canvas import SceneCanvas  # noqa
+from . import visuals  # noqa
+from ..visuals import transforms  # noqa
+from ..visuals import filters  # noqa
+from . import widgets  # noqa
+from . import cameras  # noqa
+from .node import Node  # noqa

vispy/scene/cameras/__init__.py

@@ -0,0 +1,27 @@
+# -*- coding: utf-8 -*-
+# Copyright (c) Vispy Development Team. All Rights Reserved.
+# Distributed under the (new) BSD License. See LICENSE.txt for more info.
+"""
+Cameras are responsible for determining which part of a scene is displayed
+in a viewbox and for handling user input to change the view.
+
+Several Camera subclasses are available to customize the projection of the 
+scene such as 3D perspective and orthographic projections, 2D 
+scale/translation, and other specialty cameras. A variety of user interaction
+styles are available for each camera including arcball, turntable, 
+first-person, and pan/zoom interactions.
+
+Internally, Cameras work by setting the transform of a SubScene object such 
+that a certain part of the scene is mapped to the bounding rectangle of the 
+ViewBox.
+"""
+__all__ = ['ArcballCamera', 'BaseCamera', 'FlyCamera', 'MagnifyCamera',
+           'Magnify1DCamera', 'PanZoomCamera', 'TurntableCamera']
+
+from ._base import make_camera  # noqa
+from .base_camera import BaseCamera  # noqa
+from .panzoom import PanZoomCamera  # noqa
+from .arcball import ArcballCamera  # noqa
+from .turntable import TurntableCamera  # noqa
+from .fly import FlyCamera  # noqa
+from .magnify import MagnifyCamera, Magnify1DCamera  # noqa

vispy/scene/cameras/_base.py

@@ -0,0 +1,38 @@
+# -*- coding: utf-8 -*-
+# Copyright (c) Vispy Development Team. All Rights Reserved.
+# Distributed under the (new) BSD License. See LICENSE.txt for more info.
+from .base_camera import BaseCamera
+from .perspective import PerspectiveCamera
+from .panzoom import PanZoomCamera
+from .arcball import ArcballCamera
+from .turntable import TurntableCamera
+from .fly import FlyCamera
+
+
+def make_camera(cam_type, *args, **kwargs):
+    """Factory function for creating new cameras using a string name.
+
+    Parameters
+    ----------
+    cam_type : str
+        May be one of:
+
+            * 'panzoom' : Creates :class:`PanZoomCamera`
+            * 'turntable' : Creates :class:`TurntableCamera`
+            * None : Creates :class:`Camera`
+
+    Notes
+    -----
+    All extra arguments are passed to the __init__ method of the selected
+    Camera class.
+    """
+    cam_types = {None: BaseCamera}
+    for camType in (BaseCamera, PanZoomCamera, PerspectiveCamera,
+                    TurntableCamera, FlyCamera, ArcballCamera):
+        cam_types[camType.__name__[:-6].lower()] = camType
+
+    try:
+        return cam_types[cam_type](*args, **kwargs)
+    except KeyError:
+        raise KeyError('Unknown camera type "%s". Options are: %s' %
+                       (cam_type, cam_types.keys()))