tnfr 4.5.1__py3-none-any.whl → 6.0.0__py3-none-any.whl

tnfr/metrics.py

@@ -1,597 +0,0 @@
-from __future__ import annotations
-from typing import Dict, Any, List, Tuple
-from collections import defaultdict, Counter
-import statistics
-import csv
-import json
-from math import cos
-
-from .constants import DEFAULTS, ALIAS_EPI, ALIAS_THETA, ALIAS_DNFR
-from .helpers import (
-    register_callback,
-    ensure_history,
-    last_glifo,
-    _get_attr,
-    clamp01,
-    list_mean,
-    fmean,
-)
-from .sense import GLYPHS_CANONICAL
-
-# -------------
-# DEFAULTS
-# -------------
-DEFAULTS.setdefault("METRICS", {
-    "enabled": True,
-    "save_by_node": True,     # guarda Tg por nodo (más pesado)
-    "normalize_series": False # glifograma normalizado a fracción por paso
-})
-
-    
-    
-# -------------
-# Utilidades internas
-# -------------
-
-
-# -------------
-# Estado nodal para Tg
-# -------------
-
-def _tg_state(nd: Dict[str, Any]) -> Dict[str, Any]:
-    """Estructura interna por nodo para acumular tiempos de corrida por glifo.
-    Campos: curr (glifo actual), run (tiempo acumulado en el glifo actual)
-    """
-    return nd.setdefault("_Tg", {"curr": None, "run": 0.0})
-
-
-# -------------
-# Callback principal: actualizar métricas por paso
-# -------------
-
-def _metrics_step(G, *args, **kwargs):
-    """Actualiza métricas operativas TNFR por paso.
-
-    - Tg (tiempo glífico): sumatoria de corridas por glifo (global y por nodo).
-    - Índice de latencia: fracción de nodos en SH’A.
-    - Glifograma: conteo o fracción por glifo en el paso.
-
-    Todos los resultados se guardan en G.graph['history'].
-    """
-    if not G.graph.get("METRICS", DEFAULTS.get("METRICS", {})).get("enabled", True):
-        return
-
-    hist = ensure_history(G)
-    dt = float(G.graph.get("DT", 1.0))
-    t = float(G.graph.get("_t", 0.0))
-
-    # --- Glifograma (conteos por glifo este paso) ---
-    counts = Counter()
-
-    # --- Índice de latencia: proporción de nodos en SH’A ---
-    n_total = 0
-    n_latent = 0
-
-    # --- Tg: acumular corridas por nodo ---
-    save_by_node = bool(G.graph.get("METRICS", DEFAULTS["METRICS"]).get("save_by_node", True))
-    tg_total = hist.setdefault("Tg_total", defaultdict(float))  # tiempo total por glifo (global)
-    tg_by_node = hist.setdefault("Tg_by_node", {})             # nodo → {glifo: [runs,...]}
-
-    for n in G.nodes():
-        nd = G.nodes[n]
-        g = last_glifo(nd)
-        if not g:
-            continue
-
-        n_total += 1
-        if g == "SH’A":
-            n_latent += 1
-
-        counts[g] += 1
-
-        st = _tg_state(nd)
-        # Si seguimos en el mismo glifo, acumulamos; si cambiamos, cerramos corrida
-        if st["curr"] is None:
-            st["curr"] = g
-            st["run"] = dt
-        elif g == st["curr"]:
-            st["run"] += dt
-        else:
-            # cerramos corrida anterior
-            prev = st["curr"]
-            dur = float(st["run"])
-            tg_total[prev] += dur
-            if save_by_node:
-                rec = tg_by_node.setdefault(n, defaultdict(list))
-                rec[prev].append(dur)
-            # reiniciamos corrida
-            st["curr"] = g
-            st["run"] = dt
-
-    # Al final del paso, no cerramos la corrida actual: se cerrará cuando cambie.
-
-    # Guardar glifograma (conteos crudos y normalizados)
-    norm = bool(G.graph.get("METRICS", DEFAULTS["METRICS"]).get("normalize_series", False))
-    row = {"t": t}
-    total = max(1, sum(counts.values()))
-    for g in GLYPHS_CANONICAL:
-        c = counts.get(g, 0)
-        row[g] = (c / total) if norm else c
-    hist.setdefault("glifogram", []).append(row)
-
-    # Guardar índice de latencia
-    li = (n_latent / max(1, n_total)) if n_total else 0.0
-    hist.setdefault("latency_index", []).append({"t": t, "value": li})
-
-    # --- Soporte y norma de la EPI ---
-    thr = float(G.graph.get("EPI_SUPPORT_THR", DEFAULTS.get("EPI_SUPPORT_THR", 0.0)))
-    supp_nodes = [n for n in G.nodes() if abs(_get_attr(G.nodes[n], ALIAS_EPI, 0.0)) >= thr]
-    norm = (
-        sum(abs(_get_attr(G.nodes[n], ALIAS_EPI, 0.0)) for n in supp_nodes) / len(supp_nodes)
-        if supp_nodes else 0.0
-    )
-    hist.setdefault("EPI_support", []).append({"t": t, "size": len(supp_nodes), "norm": float(norm)})
-
-    # --- Métricas morfosintácticas ---
-    total = max(1, sum(counts.values()))
-    id_val = counts.get("O’Z", 0) / total
-    cm_val = (counts.get("Z’HIR", 0) + counts.get("NA’V", 0)) / total
-    ne_val = (counts.get("I’L", 0) + counts.get("T’HOL", 0)) / total
-    pp_val = counts.get("SH’A", 0) / max(1, counts.get("RE’MESH", 0))
-    hist.setdefault("morph", []).append({"t": t, "ID": id_val, "CM": cm_val, "NE": ne_val, "PP": pp_val})
-
-
-# -------------
-# Registro del callback
-# -------------
-
-def register_metrics_callbacks(G) -> None:
-    register_callback(G, when="after_step", func=_metrics_step, name="metrics_step")
-    # Nuevas funcionalidades canónicas
-    register_coherence_callbacks(G)
-    register_diagnosis_callbacks(G)
-
-
-# -------------
-# Consultas / reportes
-# -------------
-
-def Tg_global(G, normalize: bool = True) -> Dict[str, float]:
-    """Tiempo glífico total por clase. Si normalize=True, devuelve fracciones del total."""
-    hist = ensure_history(G)
-    tg_total: Dict[str, float] = hist.get("Tg_total", {})
-    total = sum(tg_total.values()) or 1.0
-    if normalize:
-        return {g: float(tg_total.get(g, 0.0)) / total for g in GLYPHS_CANONICAL}
-    return {g: float(tg_total.get(g, 0.0)) for g in GLYPHS_CANONICAL}
-
-
-def Tg_by_node(G, n, normalize: bool = False) -> Dict[str, float | List[float]]:
-    """Resumen por nodo: si normalize, devuelve medias por glifo; si no, lista de corridas."""
-    hist = ensure_history(G)
-    rec = hist.get("Tg_by_node", {}).get(n, {})
-    if not normalize:
-        # convertir default dict → list para serializar
-        return {g: list(rec.get(g, [])) for g in GLYPHS_CANONICAL}
-    out = {}
-    for g in GLYPHS_CANONICAL:
-        runs = rec.get(g, [])
-        out[g] = float(statistics.mean(runs)) if runs else 0.0
-        
-    return out
-
-
-def latency_series(G) -> Dict[str, List[float]]:
-    hist = ensure_history(G)
-    xs = hist.get("latency_index", [])
-    return {
-        "t": [float(x.get("t", i)) for i, x in enumerate(xs)],
-        "value": [float(x.get("value", 0.0)) for x in xs],
-    }
-
-
-def glifogram_series(G) -> Dict[str, List[float]]:
-    hist = ensure_history(G)
-    xs = hist.get("glifogram", [])
-    if not xs:
-        return {"t": []}
-    out = {"t": [float(x.get("t", i)) for i, x in enumerate(xs)]}
-    for g in GLYPHS_CANONICAL:
-        out[g] = [float(x.get(g, 0.0)) for x in xs]
-    return out
-
-
-def glyph_top(G, k: int = 3) -> List[Tuple[str, float]]:
-    """Top-k operadores estructurales por Tg_global (fracción)."""
-    tg = Tg_global(G, normalize=True)
-    return sorted(tg.items(), key=lambda kv: kv[1], reverse=True)[:max(1, int(k))]
-
-
-def glyph_dwell_stats(G, n) -> Dict[str, Dict[str, float]]:
-    """Estadísticos por nodo: mean/median/max de corridas por glifo."""
-    hist = ensure_history(G)
-    rec = hist.get("Tg_by_node", {}).get(n, {})
-    out = {}
-    for g in GLYPHS_CANONICAL:
-        runs = list(rec.get(g, []))
-        if not runs:
-            out[g] = {"mean": 0.0, "median": 0.0, "max": 0.0, "count": 0}
-        else:
-            out[g] = {
-                "mean": float(statistics.mean(runs)),
-                "median": float(statistics.median(runs)),
-                "max": float(max(runs)),
-                "count": int(len(runs)),
-            }
-    return out
-
-
-# -----------------------------
-# Export history to CSV/JSON
-# -----------------------------
-
-def export_history(G, base_path: str, fmt: str = "csv") -> None:
-    """Vuelca glifograma y traza σ(t) a archivos CSV o JSON compactos."""
-    hist = ensure_history(G)
-    glifo = glifogram_series(G)
-    sigma_mag = hist.get("sense_sigma_mag", [])
-    sigma = {
-        "t": list(range(len(sigma_mag))),
-        "sigma_x": hist.get("sense_sigma_x", []),
-        "sigma_y": hist.get("sense_sigma_y", []),
-        "mag": sigma_mag,
-        "angle": hist.get("sense_sigma_angle", []),
-    }
-    morph = hist.get("morph", [])
-    epi_supp = hist.get("EPI_support", [])
-    fmt = fmt.lower()
-    if fmt == "csv":
-        with open(base_path + "_glifogram.csv", "w", newline="") as f:
-            writer = csv.writer(f)
-            writer.writerow(["t", *GLYPHS_CANONICAL])
-            ts = glifo.get("t", [])
-            default_col = [0] * len(ts)
-            for i, t in enumerate(ts):
-                row = [t] + [glifo.get(g, default_col)[i] for g in GLYPHS_CANONICAL]
-                writer.writerow(row)
-        with open(base_path + "_sigma.csv", "w", newline="") as f:
-            writer = csv.writer(f)
-            writer.writerow(["t", "x", "y", "mag", "angle"])
-            for i, t in enumerate(sigma["t"]):
-                writer.writerow([t, sigma["sigma_x"][i], sigma["sigma_y"][i], sigma["mag"][i], sigma["angle"][i]])
-        if morph:
-            with open(base_path + "_morph.csv", "w", newline="") as f:
-                writer = csv.writer(f)
-                writer.writerow(["t", "ID", "CM", "NE", "PP"])
-                for row in morph:
-                    writer.writerow([row.get("t"), row.get("ID"), row.get("CM"), row.get("NE"), row.get("PP")])
-        if epi_supp:
-            with open(base_path + "_epi_support.csv", "w", newline="") as f:
-                writer = csv.writer(f)
-                writer.writerow(["t", "size", "norm"])
-                for row in epi_supp:
-                    writer.writerow([row.get("t"), row.get("size"), row.get("norm")])
-    else:
-        data = {"glifogram": glifo, "sigma": sigma, "morph": morph, "epi_support": epi_supp}
-        with open(base_path + ".json", "w") as f:
-            json.dump(data, f)
-
-
-# =========================
-# COHERENCIA W_ij^t (TNFR)
-# =========================
-
-
-def _norm01(x, lo, hi):
-    if hi <= lo:
-        return 0.0
-    v = (float(x) - float(lo)) / (float(hi) - float(lo))
-    return 0.0 if v < 0 else (1.0 if v > 1.0 else v)
-
-
-def _similarity_abs(a, b, lo, hi):
-    return 1.0 - _norm01(abs(float(a) - float(b)), 0.0, float(hi - lo) if hi > lo else 1.0)
-
-
-def _coherence_components(G, ni, nj, epi_min, epi_max, vf_min, vf_max):
-    ndi = G.nodes[ni]
-    ndj = G.nodes[nj]
-    th_i = _get_attr(ndi, ALIAS_THETA, 0.0)
-    th_j = _get_attr(ndj, ALIAS_THETA, 0.0)
-    s_phase = 0.5 * (1.0 + cos(th_i - th_j))
-    epi_i = _get_attr(ndi, ALIAS_EPI, 0.0)
-    epi_j = _get_attr(ndj, ALIAS_EPI, 0.0)
-    s_epi = _similarity_abs(epi_i, epi_j, epi_min, epi_max)
-    vf_i = float(_get_attr(ndi, "νf", 0.0))
-    vf_j = float(_get_attr(ndj, "νf", 0.0))
-    s_vf = _similarity_abs(vf_i, vf_j, vf_min, vf_max)
-    si_i = clamp01(float(_get_attr(ndi, "Si", 0.0)))
-    si_j = clamp01(float(_get_attr(ndj, "Si", 0.0)))
-    s_si = 1.0 - abs(si_i - si_j)
-    return s_phase, s_epi, s_vf, s_si
-
-
-def coherence_matrix(G):
-    cfg = G.graph.get("COHERENCE", DEFAULTS["COHERENCE"])
-    if not cfg.get("enabled", True):
-        return None, None
-
-    nodes = list(G.nodes())
-    n = len(nodes)
-    if n == 0:
-        return nodes, []
-
-    # Precompute indices to avoid repeated list.index calls within loops
-    node_to_index = {node: idx for idx, node in enumerate(nodes)}
-
-    epi_vals = [float(_get_attr(G.nodes[v], ALIAS_EPI, 0.0)) for v in nodes]
-    vf_vals = [float(_get_attr(G.nodes[v], "νf", 0.0)) for v in nodes]
-    epi_min, epi_max = min(epi_vals), max(epi_vals)
-    vf_min, vf_max = min(vf_vals), max(vf_vals)
-
-    wdict = dict(cfg.get("weights", {}))
-    for k in ("phase", "epi", "vf", "si"):
-        wdict.setdefault(k, 0.0)
-    wsum = sum(float(v) for v in wdict.values()) or 1.0
-    wnorm = {k: float(v) / wsum for k, v in wdict.items()}
-
-    scope = str(cfg.get("scope", "neighbors")).lower()
-    neighbors_only = scope != "all"
-    self_diag = bool(cfg.get("self_on_diag", True))
-    mode = str(cfg.get("store_mode", "sparse")).lower()
-    thr = float(cfg.get("threshold", 0.0))
-    if mode not in ("sparse", "dense"):
-        mode = "sparse"
-
-    if mode == "dense":
-        W = [[0.0] * n for _ in range(n)]
-    else:
-        W = []
-
-    row_sum = [0.0] * n
-    row_count = [0] * n
-
-    for i, ni in enumerate(nodes):
-        if self_diag:
-            if mode == "dense":
-                W[i][i] = 1.0
-            else:
-                W.append((i, i, 1.0))
-            row_sum[i] += 1.0
-            row_count[i] += 1
-
-        neighs = G.neighbors(ni) if neighbors_only else nodes
-        for nj in neighs:
-            if nj == ni:
-                continue
-            j = node_to_index[nj]
-            s_phase, s_epi, s_vf, s_si = _coherence_components(
-                G, ni, nj, epi_min, epi_max, vf_min, vf_max
-            )
-            wij = (
-                wnorm["phase"] * s_phase
-                + wnorm["epi"] * s_epi
-                + wnorm["vf"] * s_vf
-                + wnorm["si"] * s_si
-            )
-            wij = clamp01(wij)
-            if mode == "dense":
-                W[i][j] = wij
-            else:
-                if wij >= thr:
-                    W.append((i, j, wij))
-            row_sum[i] += wij
-            row_count[i] += 1
-
-    Wi = [row_sum[i] / max(1, row_count[i]) for i in range(n)]
-    vals = []
-    if mode == "dense":
-        for i in range(n):
-            for j in range(n):
-                if i == j:
-                    continue
-                vals.append(W[i][j])
-    else:
-        for (i, j, w) in W:
-            if i == j:
-                continue
-            vals.append(w)
-
-    stats = {
-        "min": min(vals) if vals else 0.0,
-        "max": max(vals) if vals else 0.0,
-        "mean": (sum(vals) / len(vals)) if vals else 0.0,
-        "n_edges": len(vals),
-        "mode": mode,
-        "scope": scope,
-    }
-
-    hist = ensure_history(G)
-    hist.setdefault(cfg.get("history_key", "W_sparse"), []).append(W)
-    hist.setdefault(cfg.get("Wi_history_key", "W_i"), []).append(Wi)
-    hist.setdefault(cfg.get("stats_history_key", "W_stats"), []).append(stats)
-
-    return nodes, W
-
-
-def local_phase_sync_weighted(G, n, nodes_order=None, W_row=None):
-    import cmath
-
-    cfg = G.graph.get("COHERENCE", DEFAULTS["COHERENCE"])
-    scope = str(cfg.get("scope", "neighbors")).lower()
-    neighbors_only = scope != "all"
-
-    if W_row is None or nodes_order is None:
-        vec = [
-            cmath.exp(1j * float(_get_attr(G.nodes[v], ALIAS_THETA, 0.0)))
-            for v in (G.neighbors(n) if neighbors_only else (set(G.nodes()) - {n}))
-        ]
-        if not vec:
-            return 0.0
-        mean = sum(vec) / len(vec)
-        return abs(mean)
-
-    i = nodes_order.index(n)
-    if isinstance(W_row, list) and W_row and isinstance(W_row[0], (int, float)):
-        weights = W_row
-    else:
-        weights = [0.0] * len(nodes_order)
-        for (ii, jj, w) in W_row:
-            if ii == i:
-                weights[jj] = w
-
-    num = 0 + 0j
-    den = 0.0
-    for j, nj in enumerate(nodes_order):
-        if nj == n:
-            continue
-        w = weights[j]
-        den += w
-        th_j = float(_get_attr(G.nodes[nj], ALIAS_THETA, 0.0))
-        num += w * cmath.exp(1j * th_j)
-    return abs(num / den) if den else 0.0
-
-
-def _coherence_step(G, ctx=None):
-    if not G.graph.get("COHERENCE", DEFAULTS["COHERENCE"]).get("enabled", True):
-        return
-    coherence_matrix(G)
-
-
-def register_coherence_callbacks(G) -> None:
-    register_callback(G, when="after_step", func=_coherence_step, name="coherence_step")
-
-
-# =========================
-# DIAGNÓSTICO NODAL (TNFR)
-# =========================
-
-
-def _dnfr_norm(nd, dnfr_max):
-    val = abs(float(_get_attr(nd, ALIAS_DNFR, 0.0)))
-    if dnfr_max <= 0:
-        return 0.0
-    x = val / dnfr_max
-    return 1.0 if x > 1 else x
-
-
-def _symmetry_index(G, n, k=3, epi_min=None, epi_max=None):
-    nd = G.nodes[n]
-    epi_i = float(_get_attr(nd, ALIAS_EPI, 0.0))
-    vec = list(G.neighbors(n))
-    if not vec:
-        return 1.0
-    epi_bar = fmean(float(_get_attr(G.nodes[v], ALIAS_EPI, epi_i)) for v in vec)
-    if epi_min is None or epi_max is None:
-        epis = [float(_get_attr(G.nodes[v], ALIAS_EPI, 0.0)) for v in G.nodes()]
-        epi_min, epi_max = min(epis), max(epis)
-    return _similarity_abs(epi_i, epi_bar, epi_min, epi_max)
-
-
-def _state_from_thresholds(Rloc, dnfr_n, cfg):
-    stb = cfg.get("stable", {"Rloc_hi": 0.8, "dnfr_lo": 0.2, "persist": 3})
-    dsr = cfg.get("dissonance", {"Rloc_lo": 0.4, "dnfr_hi": 0.5, "persist": 3})
-    if (Rloc >= float(stb["Rloc_hi"])) and (dnfr_n <= float(stb["dnfr_lo"])):
-        return "estable"
-    if (Rloc <= float(dsr["Rloc_lo"])) and (dnfr_n >= float(dsr["dnfr_hi"])):
-        return "disonante"
-    return "transicion"
-
-
-def _recommendation(state, cfg):
-    adv = cfg.get("advice", {})
-    key = {"estable": "stable", "transicion": "transition", "disonante": "dissonant"}[state]
-    return list(adv.get(key, []))
-
-
-def _diagnosis_step(G, ctx=None):
-    dcfg = G.graph.get("DIAGNOSIS", DEFAULTS["DIAGNOSIS"])
-    if not dcfg.get("enabled", True):
-        return
-
-    hist = ensure_history(G)
-    key = dcfg.get("history_key", "nodal_diag")
-
-    dnfr_vals = [abs(float(_get_attr(G.nodes[v], ALIAS_DNFR, 0.0))) for v in G.nodes()]
-    dnfr_max = max(dnfr_vals) if dnfr_vals else 1.0
-    epi_vals = [float(_get_attr(G.nodes[v], ALIAS_EPI, 0.0)) for v in G.nodes()]
-    epi_min, epi_max = (min(epi_vals) if epi_vals else 0.0), (max(epi_vals) if epi_vals else 1.0)
-
-    CfgW = G.graph.get("COHERENCE", DEFAULTS["COHERENCE"])
-    Wkey = CfgW.get("Wi_history_key", "W_i")
-    Wm_key = CfgW.get("history_key", "W_sparse")
-    Wi_series = hist.get(Wkey, [])
-    Wi_last = Wi_series[-1] if Wi_series else None
-    Wm_series = hist.get(Wm_key, [])
-    Wm_last = Wm_series[-1] if Wm_series else None
-
-    nodes = list(G.nodes())
-    diag = {}
-    for i, n in enumerate(nodes):
-        nd = G.nodes[n]
-        Si = clamp01(float(_get_attr(nd, "Si", 0.0)))
-        EPI = float(_get_attr(nd, ALIAS_EPI, 0.0))
-        vf = float(_get_attr(nd, "νf", 0.0))
-        dnfr_n = _dnfr_norm(nd, dnfr_max)
-
-        Rloc = 0.0
-        if Wm_last is not None:
-            if Wm_last and isinstance(Wm_last[0], list):
-                row = Wm_last[i]
-            else:
-                row = Wm_last
-            Rloc = local_phase_sync_weighted(G, n, nodes_order=nodes, W_row=row)
-        else:
-            Rloc = local_phase_sync_weighted(G, n)
-
-        symm = _symmetry_index(G, n, epi_min=epi_min, epi_max=epi_max) if dcfg.get("compute_symmetry", True) else None
-        state = _state_from_thresholds(Rloc, dnfr_n, dcfg)
-
-        alerts = []
-        if state == "disonante" and dnfr_n >= float(dcfg.get("dissonance", {}).get("dnfr_hi", 0.5)):
-            alerts.append("tensión estructural alta")
-
-        advice = _recommendation(state, dcfg)
-
-        rec = {
-            "node": n,
-            "Si": Si,
-            "EPI": EPI,
-            "νf": vf,
-            "dnfr_norm": dnfr_n,
-            "W_i": (Wi_last[i] if (Wi_last and i < len(Wi_last)) else None),
-            "R_local": Rloc,
-            "symmetry": symm,
-            "state": state,
-            "advice": advice,
-            "alerts": alerts,
-        }
-        diag[n] = rec
-
-    hist.setdefault(key, []).append(diag)
-
-
-def dissonance_events(G, ctx=None):
-    """Emite eventos de inicio/fin de disonancia estructural por nodo."""
-    hist = ensure_history(G)
-    evs = hist.setdefault("events", [])
-    norms = G.graph.get("_sel_norms", {})
-    dnfr_max = float(norms.get("dnfr_max", 1.0)) or 1.0
-    step_idx = len(hist.get("C_steps", []))
-    for n in G.nodes():
-        nd = G.nodes[n]
-        dn = abs(_get_attr(nd, ALIAS_DNFR, 0.0)) / dnfr_max
-        Rloc = local_phase_sync_weighted(G, n)
-        st = bool(nd.get("_disr_state", False))
-        if (not st) and dn >= 0.5 and Rloc <= 0.4:
-            nd["_disr_state"] = True
-            evs.append(("disonance_start", {"node": n, "step": step_idx}))
-        elif st and dn <= 0.2 and Rloc >= 0.7:
-            nd["_disr_state"] = False
-            evs.append(("disonance_end", {"node": n, "step": step_idx}))
-
-
-def register_diagnosis_callbacks(G) -> None:
-    register_callback(G, when="after_step", func=_diagnosis_step, name="diagnosis_step")
-    register_callback(G, when="after_step", func=dissonance_events, name="dissonance_events")
-