setiastrosuitepro 1.6.5.post3__py3-none-any.whl

setiastro/saspro/linear_fit.py

@@ -0,0 +1,537 @@
+# pro/linear_fit.py
+from __future__ import annotations
+
+import numpy as np
+from dataclasses import dataclass
+from typing import Optional, Tuple, List
+
+from PyQt6.QtCore import Qt, QThread, pyqtSignal
+from PyQt6.QtWidgets import (
+    QDialog, QVBoxLayout, QHBoxLayout, QLabel, QComboBox, QDialogButtonBox,
+    QPushButton, QGroupBox, QMessageBox, QGridLayout, QWidget, QProgressBar
+)
+
+# --------------------------------------------------------------------------------------
+# Preset editor (used by Shortcuts “Edit Preset…”). Import into shortcuts.py like:
+#   from setiastro.saspro.linear_fit import _LinearFitPresetDialog
+# and then store/load via your existing _load_preset/_save_preset helpers.
+# --------------------------------------------------------------------------------------
+
+class _LinearFitPresetDialog(QDialog):
+    """
+    Stores defaults for Linear Fit when run via shortcuts/DnD.
+    For mono images the preset does not store a specific reference;
+    we will ask the user if needed.
+    """
+    def __init__(self, parent=None, initial: dict | None = None):
+        super().__init__(parent)
+        self.setWindowTitle("Linear Fit — Preset")
+        init = dict(initial or {})
+        v = QVBoxLayout(self)
+
+        gb = QGroupBox("RGB strategy", self)
+        grid = QGridLayout(gb)
+        self.combo_rgb_mode = QComboBox(self)
+        self.combo_rgb_mode.addItems([
+            "Match to Highest Median",
+            "Match to Lowest Median",
+            "Match to Red",
+            "Match to Green",
+            "Match to Blue",
+        ])
+        self.combo_rgb_mode.setCurrentIndex(int(init.get("rgb_mode_idx", 0)))
+        grid.addWidget(QLabel("Target channel:"), 0, 0)
+        grid.addWidget(self.combo_rgb_mode, 0, 1)
+        v.addWidget(gb)
+
+        gb2 = QGroupBox("Out-of-range handling", self)
+        h2 = QHBoxLayout(gb2)
+        self.combo_rescale = QComboBox(self)
+        self.combo_rescale.addItems([
+            "Clip to [0..1]",
+            "Normalize to [0..1] if needed",
+            "Leave values as-is",
+        ])
+        self.combo_rescale.setCurrentIndex(int(init.get("rescale_mode_idx", 1)))
+        h2.addWidget(QLabel("Mode:"))
+        h2.addWidget(self.combo_rescale, 1)
+        v.addWidget(gb2)
+
+        info = QLabel("Mono images will be matched to a reference view's median.\n"
+                      "If reference isn’t provided in the headless path, you'll be asked.")
+        info.setWordWrap(True)
+        v.addWidget(info)
+
+        btns = QDialogButtonBox(QDialogButtonBox.StandardButton.Ok | QDialogButtonBox.StandardButton.Cancel, parent=self)
+        btns.accepted.connect(self.accept); btns.rejected.connect(self.reject)
+        v.addWidget(btns)
+
+    def result_dict(self) -> dict:
+        return {
+            "rgb_mode_idx": int(self.combo_rgb_mode.currentIndex()),
+            "rescale_mode_idx": int(self.combo_rescale.currentIndex()),
+        }
+
+# --------------------------------------------------------------------------------------
+# Engine: pure NumPy Linear Fit helpers
+# --------------------------------------------------------------------------------------
+
+def _nanmedian(x: np.ndarray) -> float:
+    try:
+        m = float(np.nanmedian(x))
+        if np.isfinite(m):
+            return m
+    except Exception:
+        pass
+    return 0.0
+
+def _postprocess(arr: np.ndarray, rescale_mode_idx: int) -> np.ndarray:
+    """
+    rescale_mode_idx:
+      0 = clip to [0..1]
+      1 = normalize to [0..1] if min<0 or max>1
+      2 = leave values as-is
+    """
+    if rescale_mode_idx == 2:
+        return arr
+    if rescale_mode_idx == 0:
+        return np.clip(arr, 0.0, 1.0)
+    # normalize if needed
+    a_min = float(np.nanmin(arr))
+    a_max = float(np.nanmax(arr))
+    if a_min >= 0.0 and a_max <= 1.0:
+        return arr
+    rng = max(a_max - a_min, 1e-12)
+    return (arr - a_min) / rng
+
+def linear_fit_rgb(img: np.ndarray, rgb_mode_idx: int, rescale_mode_idx: int) -> Tuple[np.ndarray, int, List[float], List[float]]:
+    """
+    Fit each channel to a reference channel by median.
+    Returns (out, ref_idx, medians_before, scales).
+    """
+    assert img.ndim == 3 and img.shape[2] >= 3, "RGB image expected"
+    work = img.astype(np.float32, copy=False)
+    meds = [_nanmedian(work[..., c]) for c in range(3)]
+    eps = 1e-12
+
+    if rgb_mode_idx == 0:      # Highest
+        ref_idx = int(np.argmax(meds))
+    elif rgb_mode_idx == 1:    # Lowest
+        ref_idx = int(np.argmin(meds))
+    elif rgb_mode_idx == 2:    # Red
+        ref_idx = 0
+    elif rgb_mode_idx == 3:    # Green
+        ref_idx = 1
+    else:                      # Blue
+        ref_idx = 2
+
+    m_ref = max(meds[ref_idx], eps)
+    scales = []
+    out = work.copy()
+    for c in range(3):
+        m_c = max(meds[c], eps)
+        s = m_ref / m_c
+        scales.append(float(s))
+        out[..., c] *= float(s)
+
+    out = _postprocess(out, rescale_mode_idx)
+    return out, ref_idx, meds, scales
+
+def linear_fit_mono_to_ref(mono: np.ndarray, ref: np.ndarray, rescale_mode_idx: int) -> Tuple[np.ndarray, float, float]:
+    """
+    Scale mono image median to the reference image median (RGB ref uses luminance proxy).
+    Returns (out, m_src, m_ref).
+    """
+    mono = mono.astype(np.float32, copy=False)
+    if ref.ndim == 3 and ref.shape[2] >= 3:
+        ref_lum = 0.2126*ref[...,0] + 0.7152*ref[...,1] + 0.0722*ref[...,2]
+        m_ref = _nanmedian(ref_lum)
+    else:
+        m_ref = _nanmedian(ref)
+
+    m_src = _nanmedian(mono)
+    eps = 1e-12
+    s = (m_ref) / max(m_src, eps)
+    out = mono * float(s)
+    out = _postprocess(out, rescale_mode_idx)
+    return out, m_src, m_ref
+
+# --------------------------------------------------------------------------------------
+# Worker
+# --------------------------------------------------------------------------------------
+
+@dataclass
+class _Job:
+    mode: str                         # "rgb" or "mono"
+    rgb_mode_idx: int = 0
+    rescale_mode_idx: int = 1
+    src: Optional[np.ndarray] = None
+    ref: Optional[np.ndarray] = None  # only for mono mode
+
+class _LinearFitWorker(QThread):
+    progress = pyqtSignal(int, str)
+    failed = pyqtSignal(str)
+    done = pyqtSignal(object, str)    # (np.ndarray, step_name)
+
+    def __init__(self, job: _Job):
+        super().__init__()
+        self.job = job
+
+    def run(self):
+        try:
+            j = self.job
+            if j.src is None:
+                raise RuntimeError("No source image")
+            self.progress.emit(5, "Analyzing…")
+
+            if j.mode == "rgb":
+                out, ref_idx, meds, scales = linear_fit_rgb(j.src, j.rgb_mode_idx, j.rescale_mode_idx)
+                names = ["R", "G", "B"]
+                target = {
+                    0: "highest median", 1: "lowest median",
+                    2: "Red", 3: "Green", 4: "Blue"
+                }.get(j.rgb_mode_idx, "highest median")
+                step = f"Linear Fit (RGB → {names[ref_idx]} / {target})"
+                self.progress.emit(100, "Done")
+                self.done.emit(out, step)
+                return
+
+            if j.mode == "mono":
+                if j.ref is None:
+                    raise RuntimeError("No reference image selected")
+                out, m_src, m_ref = linear_fit_mono_to_ref(j.src, j.ref, j.rescale_mode_idx)
+                step = "Linear Fit (mono → reference median)"
+                self.progress.emit(100, "Done")
+                self.done.emit(out, step)
+                return
+
+            raise RuntimeError("Unknown mode")
+
+        except Exception as e:
+            self.failed.emit(str(e))
+
+# --------------------------------------------------------------------------------------
+# Modal dialog to configure & run on the ACTIVE view
+# --------------------------------------------------------------------------------------
+
+class LinearFitDialog(QDialog):
+    """
+    One-shot UI: works on the active doc image.
+    For RGB → choose target channel strategy.
+    For mono → pick a reference view from doc_manager.
+    Applies result back through doc_manager.apply_edit_to_active().
+    """
+    def __init__(self, parent, doc_manager, active_doc):
+        super().__init__(parent)
+        self.setWindowTitle("Linear Fit")
+        self.setWindowFlag(Qt.WindowType.Window, True)
+        self.setWindowModality(Qt.WindowModality.NonModal)
+        self.setModal(False)
+        self.dm = doc_manager
+        self.doc = active_doc
+        self.worker: Optional[_LinearFitWorker] = None
+
+        if active_doc is None or getattr(active_doc, "image", None) is None:
+            raise RuntimeError("No active image/view")
+
+        img = np.asarray(active_doc.image)
+        self._src = img.astype(np.float32, copy=False)
+
+        v = QVBoxLayout(self)
+
+        # Determine mode
+        is_rgb = (self._src.ndim == 3 and self._src.shape[2] >= 3)
+        self.mode = "rgb" if is_rgb else "mono"
+
+        if self.mode == "rgb":
+            gb = QGroupBox("RGB options", self)
+            g = QGridLayout(gb)
+            self.combo_rgb = QComboBox(self)
+            self.combo_rgb.addItems([
+                "Match to Highest Median",
+                "Match to Lowest Median",
+                "Match to Red",
+                "Match to Green",
+                "Match to Blue",
+            ])
+            self.combo_rgb.setCurrentIndex(0)
+            g.addWidget(QLabel("Target channel:"), 0, 0)
+            g.addWidget(self.combo_rgb, 0, 1)
+            v.addWidget(gb)
+        else:
+            gb = QGroupBox("Mono reference", self)
+            g = QGridLayout(gb)
+            self.combo_ref = QComboBox(self)
+            self._ref_docs: list = []
+            for d in self.dm.all_documents():
+                if d is active_doc:
+                    continue
+                if getattr(d, "image", None) is None:
+                    continue
+                self._ref_docs.append(d)
+                self.combo_ref.addItem(d.display_name())
+            if not self._ref_docs:
+                self.combo_ref.addItem("(no other views open)")
+            g.addWidget(QLabel("Reference view:"), 0, 0)
+            g.addWidget(self.combo_ref, 0, 1)
+            note = QLabel("If the reference is RGB, a luminance proxy is used to compute its median.")
+            note.setWordWrap(True)
+            g.addWidget(note, 1, 0, 1, 2)
+            v.addWidget(gb)
+
+        # Common: out-of-range handling
+        gb2 = QGroupBox("Out-of-range handling", self)
+        h2 = QHBoxLayout(gb2)
+        self.combo_rescale = QComboBox(self)
+        self.combo_rescale.addItems([
+            "Clip to [0..1]",
+            "Normalize to [0..1] if needed",
+            "Leave values as-is",
+        ])
+        self.combo_rescale.setCurrentIndex(1)
+        h2.addWidget(QLabel("Mode:"))
+        h2.addWidget(self.combo_rescale, 1)
+        v.addWidget(gb2)
+
+        # Progress
+        self.status = QLabel("")
+        self.bar = QProgressBar(self); self.bar.setRange(0, 100)
+        v.addWidget(self.status)
+        v.addWidget(self.bar)
+
+        # Buttons
+        btns = QDialogButtonBox(QDialogButtonBox.StandardButton.Ok | QDialogButtonBox.StandardButton.Cancel, parent=self)
+        btns.accepted.connect(self._go)
+        btns.rejected.connect(self.reject)
+        v.addWidget(btns)
+
+        # Small pre-read medians for info (non-blocking)
+        try:
+            if self.mode == "rgb":
+                meds = [_nanmedian(self._src[...,i]) for i in range(3)]
+                self.status.setText(f"Channel medians R/G/B: {meds[0]:.4g} / {meds[1]:.4g} / {meds[2]:.4g}")
+            else:
+                self.status.setText("Mono image selected. Choose a reference view.")
+        except Exception:
+            pass
+
+    def _go(self):
+        rescale_idx = int(self.combo_rescale.currentIndex())
+        job = _Job(mode=self.mode, rescale_mode_idx=rescale_idx, src=self._src)
+
+        if self.mode == "rgb":
+            job.rgb_mode_idx = int(self.combo_rgb.currentIndex())
+        else:
+            if not self._ref_docs:
+                QMessageBox.warning(self, "Linear Fit", "No reference view available.")
+                return
+            ref_doc = self._ref_docs[self.combo_ref.currentIndex()]
+            job.ref = np.asarray(ref_doc.image).astype(np.float32, copy=False)
+
+        self._run(job)
+
+    def _run(self, job: _Job):
+        self.bar.setValue(0)
+        self.status.setText("Working…")
+        self.setEnabled(False)
+
+        self.worker = _LinearFitWorker(job)
+        self.worker.progress.connect(self._on_prog)
+        self.worker.failed.connect(self._on_fail)
+        self.worker.done.connect(self._on_done)
+        self.worker.start()
+
+    def _on_prog(self, pct: int, msg: str):
+        self.bar.setValue(pct); self.status.setText(msg)
+
+    def _on_fail(self, err: str):
+        self.setEnabled(True)
+        self.status.setText("Failed.")
+        QMessageBox.critical(self, "Linear Fit", err)
+
+    def _on_done(self, out_img: np.ndarray, step_name: str):
+        self.setEnabled(True)
+        self.status.setText("Done.")
+
+        # 1) Apply result via DocManager (ROI/full handled there)
+        try:
+            self.dm.apply_edit_to_active(out_img, step_name=step_name)
+        except Exception as e:
+            QMessageBox.warning(self, "Linear Fit", f"Applied, but could not update document:\n{e}")
+
+        # 2) Remember this as the last headless-style command for Replay
+        try:
+            preset: dict = {
+                "rescale_mode_idx": int(self.combo_rescale.currentIndex()),
+                "mode": self.mode,
+            }
+            if self.mode == "rgb":
+                preset["rgb_mode_idx"] = int(self.combo_rgb.currentIndex())
+            else:
+                # Mono: stash reference info for future enhancements
+                if getattr(self, "_ref_docs", None):
+                    idx = int(self.combo_ref.currentIndex())
+                    if 0 <= idx < len(self._ref_docs):
+                        ref_doc = self._ref_docs[idx]
+                        ref_uid = getattr(ref_doc, "uid", None)
+                        if ref_uid:
+                            preset["ref_uid"] = ref_uid
+                        preset["ref_name"] = ref_doc.display_name()
+
+            # Walk up to a parent that knows how to remember headless commands
+            mw = self.parent()
+            while mw is not None and not hasattr(mw, "_remember_last_headless_command"):
+                mw = mw.parent() if hasattr(mw, "parent") else None
+
+            if mw is not None and hasattr(mw, "_remember_last_headless_command"):
+                mw._remember_last_headless_command(
+                    "linear_fit",
+                    preset,
+                    description=step_name or "Linear Fit",
+                )
+        except Exception:
+            # Replay tracking should never break the dialog
+            pass
+
+        self.accept()
+
+
+# --------------------------------------------------------------------------------------
+# Public helpers for wiring into MainWindow
+# --------------------------------------------------------------------------------------
+
+def open_linear_fit_dialog(parent, doc_manager) -> None:
+    """
+    Bring up the Linear Fit dialog for the active view.
+    Applies to active view via doc_manager on success.
+    """
+    doc = getattr(doc_manager, "get_active_document", lambda: None)()
+    if doc is None or getattr(doc, "image", None) is None:
+        QMessageBox.information(parent, "Linear Fit", "No active image.")
+        return
+    try:
+        dlg = LinearFitDialog(parent, doc_manager, doc)
+        dlg.exec()
+    except Exception as e:
+        QMessageBox.critical(parent, "Linear Fit", str(e))
+
+def apply_linear_fit_via_preset(parent, doc_manager, active_doc, preset: dict | None) -> None:
+    """
+    Headless/DnD path: apply using a preset dict (from Shortcuts).
+    If mono and no reference provided, asks the user to pick one.
+    Expected preset keys:
+        - rgb_mode_idx (int: 0..4)
+        - rescale_mode_idx (int: 0..2)
+    """
+    preset = dict(preset or {})
+    rescale_idx = int(preset.get("rescale_mode_idx", 1))
+
+    img = np.asarray(active_doc.image)
+    if img.ndim == 3 and img.shape[2] >= 3:
+        rgb_idx = int(preset.get("rgb_mode_idx", 0))
+        out, ref_idx, _, _ = linear_fit_rgb(img, rgb_idx, rescale_idx)
+        names = ["R","G","B"]
+        target = {0:"highest median", 1:"lowest median", 2:"Red", 3:"Green", 4:"Blue"}.get(rgb_idx, "highest median")
+        step = f"Linear Fit (RGB → {names[ref_idx]} / {target})"
+        doc_manager.apply_edit_to_active(out, step_name=step)
+        return
+
+    # MONO → prompt for reference
+    # Enumerate other docs
+    others = []
+    for d in doc_manager.all_documents():
+        if d is active_doc:
+            continue
+        if getattr(d, "image", None) is None:
+            continue
+        others.append(d)
+
+    if not others:
+        QMessageBox.information(parent, "Linear Fit", "Mono image requires a reference view.\nOpen another image and try again.")
+        return
+
+    # small inline pick
+    pick = QDialog(parent)
+    pick.setWindowTitle("Choose Reference View")
+    vv = QVBoxLayout(pick)
+    cb = QComboBox(pick)
+    for d in others:
+        cb.addItem(d.display_name())
+    vv.addWidget(QLabel("Reference view (median target):"))
+    vv.addWidget(cb)
+    bb = QDialogButtonBox(QDialogButtonBox.StandardButton.Ok | QDialogButtonBox.StandardButton.Cancel, parent=pick)
+    bb.accepted.connect(pick.accept); bb.rejected.connect(pick.reject)
+    vv.addWidget(bb)
+    if pick.exec() != QDialog.DialogCode.Accepted:
+        return
+    ref = np.asarray(others[cb.currentIndex()].image)
+
+    out, _, _ = linear_fit_mono_to_ref(img, ref, rescale_idx)
+    step = f"Linear Fit (mono → {others[cb.currentIndex()].display_name()})"
+    doc_manager.apply_edit_to_active(out, step_name=step)
+
+def apply_linear_fit_to_doc(parent, target_doc, preset: dict | None) -> None:
+    """
+    Replay helper: apply Linear Fit to a specific ImageDocument
+    (usually the *base* doc when 'Replay Last on Base' is used).
+
+    Currently supports RGB images; mono replay-on-base will just
+    show a friendly message so you don't get a silent no-op.
+    """
+    if target_doc is None or getattr(target_doc, "image", None) is None:
+        QMessageBox.information(parent, "Linear Fit", "No target image.")
+        return
+
+    preset = dict(preset or {})
+    rescale_idx = int(preset.get("rescale_mode_idx", 1))
+
+    img = np.asarray(target_doc.image)
+    if img.ndim == 3 and img.shape[2] >= 3:
+        rgb_idx = int(preset.get("rgb_mode_idx", 0))
+        out, ref_idx, _, _ = linear_fit_rgb(img, rgb_idx, rescale_idx)
+
+        names = ["R", "G", "B"]
+        target = {
+            0: "highest median",
+            1: "lowest median",
+            2: "Red",
+            3: "Green",
+            4: "Blue",
+        }.get(rgb_idx, "highest median")
+
+        step = f"Linear Fit (RGB → {names[ref_idx]} / {target})"
+        meta = {"step_name": step, "bit_depth": "32-bit floating point"}
+        try:
+            target_doc.apply_edit(out.astype(np.float32, copy=False),
+                                  metadata=meta,
+                                  step_name=step)
+        except Exception as e:
+            QMessageBox.warning(parent, "Linear Fit", f"Replay apply failed:\n{e}")
+        return
+
+    # Mono replay-on-base: we don't have the reference baked into the preset yet.
+    QMessageBox.information(
+        parent,
+        "Linear Fit",
+        "Replay-on-base for mono Linear Fit is not implemented yet.\n"
+        "Please re-run Linear Fit on this image via the dialog."
+    )
+
+# -------- headless command runner (Scripts / Presets / Replay) ---------------
+from setiastro.saspro.headless_utils import normalize_headless_main, unwrap_docproxy
+
+def run_linear_fit_via_preset(main, preset=None, target_doc=None):
+    from PyQt6.QtWidgets import QMessageBox
+    from setiastro.saspro.linear_fit import apply_linear_fit_via_preset
+
+    p = dict(preset or {})
+    main, doc, dm = normalize_headless_main(main, target_doc)
+
+    if dm is None:
+        QMessageBox.warning(main or None, "Linear Fit", "DocManager not available.")
+        return
+    if doc is None or getattr(doc, "image", None) is None:
+        QMessageBox.warning(main or None, "Linear Fit", "Load an image first.")
+        return
+
+    apply_linear_fit_via_preset(main, dm, doc, p)