sequenzo 0.1.18__cp310-cp310-win_amd64.whl → 0.1.20__cp310-cp310-win_amd64.whl

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  1. sequenzo/__init__.py +39 -7
  2. sequenzo/big_data/clara/utils/get_weighted_diss.c +154 -154
  3. sequenzo/big_data/clara/utils/get_weighted_diss.cp310-win_amd64.pyd +0 -0
  4. sequenzo/clustering/KMedoids.py +39 -0
  5. sequenzo/clustering/clustering_c_code.cp310-win_amd64.pyd +0 -0
  6. sequenzo/clustering/hierarchical_clustering.py +108 -6
  7. sequenzo/define_sequence_data.py +10 -1
  8. sequenzo/dissimilarity_measures/c_code.cp310-win_amd64.pyd +0 -0
  9. sequenzo/dissimilarity_measures/get_distance_matrix.py +2 -3
  10. sequenzo/dissimilarity_measures/get_substitution_cost_matrix.py +1 -1
  11. sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.c +154 -154
  12. sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.cp310-win_amd64.pyd +0 -0
  13. sequenzo/dissimilarity_measures/utils/seqconc.c +154 -154
  14. sequenzo/dissimilarity_measures/utils/seqconc.cp310-win_amd64.pyd +0 -0
  15. sequenzo/dissimilarity_measures/utils/seqdss.c +154 -154
  16. sequenzo/dissimilarity_measures/utils/seqdss.cp310-win_amd64.pyd +0 -0
  17. sequenzo/dissimilarity_measures/utils/seqdur.c +154 -154
  18. sequenzo/dissimilarity_measures/utils/seqdur.cp310-win_amd64.pyd +0 -0
  19. sequenzo/dissimilarity_measures/utils/seqlength.c +154 -154
  20. sequenzo/dissimilarity_measures/utils/seqlength.cp310-win_amd64.pyd +0 -0
  21. sequenzo/multidomain/cat.py +0 -53
  22. sequenzo/multidomain/dat.py +11 -3
  23. sequenzo/multidomain/idcd.py +0 -3
  24. sequenzo/multidomain/linked_polyad.py +0 -1
  25. sequenzo/openmp_setup.py +233 -0
  26. sequenzo/visualization/plot_transition_matrix.py +21 -22
  27. {sequenzo-0.1.18.dist-info → sequenzo-0.1.20.dist-info}/METADATA +71 -10
  28. sequenzo-0.1.20.dist-info/RECORD +272 -0
  29. sequenzo/dissimilarity_measures/setup.py +0 -35
  30. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Cholesky/LDLT.h +0 -688
  31. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Cholesky/LLT.h +0 -558
  32. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Cholesky/LLT_LAPACKE.h +0 -99
  33. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +0 -682
  34. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +0 -346
  35. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +0 -462
  36. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +0 -91
  37. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/EigenSolver.h +0 -622
  38. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +0 -418
  39. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +0 -226
  40. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +0 -374
  41. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +0 -158
  42. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/RealQZ.h +0 -657
  43. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/RealSchur.h +0 -558
  44. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +0 -77
  45. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +0 -904
  46. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +0 -87
  47. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +0 -561
  48. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/AlignedBox.h +0 -486
  49. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/AngleAxis.h +0 -247
  50. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/EulerAngles.h +0 -114
  51. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Homogeneous.h +0 -501
  52. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Hyperplane.h +0 -282
  53. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/OrthoMethods.h +0 -235
  54. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/ParametrizedLine.h +0 -232
  55. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Quaternion.h +0 -870
  56. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Rotation2D.h +0 -199
  57. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/RotationBase.h +0 -206
  58. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Scaling.h +0 -188
  59. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Transform.h +0 -1563
  60. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Translation.h +0 -202
  61. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Umeyama.h +0 -166
  62. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h +0 -168
  63. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Householder/BlockHouseholder.h +0 -110
  64. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Householder/Householder.h +0 -176
  65. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Householder/HouseholderSequence.h +0 -545
  66. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +0 -226
  67. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +0 -212
  68. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +0 -229
  69. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +0 -394
  70. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +0 -453
  71. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +0 -444
  72. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +0 -198
  73. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +0 -117
  74. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Jacobi/Jacobi.h +0 -483
  75. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/KLUSupport/KLUSupport.h +0 -358
  76. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/Determinant.h +0 -117
  77. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/FullPivLU.h +0 -877
  78. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/InverseImpl.h +0 -432
  79. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/PartialPivLU.h +0 -624
  80. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/PartialPivLU_LAPACKE.h +0 -83
  81. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/arch/InverseSize4.h +0 -351
  82. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/MetisSupport/MetisSupport.h +0 -137
  83. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/OrderingMethods/Amd.h +0 -435
  84. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +0 -1863
  85. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/OrderingMethods/Ordering.h +0 -153
  86. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +0 -678
  87. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +0 -545
  88. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/ColPivHouseholderQR.h +0 -674
  89. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +0 -97
  90. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +0 -635
  91. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/FullPivHouseholderQR.h +0 -713
  92. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/HouseholderQR.h +0 -434
  93. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/HouseholderQR_LAPACKE.h +0 -68
  94. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +0 -335
  95. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/BDCSVD.h +0 -1366
  96. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/JacobiSVD.h +0 -812
  97. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/JacobiSVD_LAPACKE.h +0 -91
  98. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/SVDBase.h +0 -376
  99. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/UpperBidiagonalization.h +0 -414
  100. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +0 -697
  101. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +0 -174
  102. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/AmbiVector.h +0 -378
  103. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/CompressedStorage.h +0 -274
  104. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +0 -352
  105. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/MappedSparseMatrix.h +0 -67
  106. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseAssign.h +0 -270
  107. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseBlock.h +0 -571
  108. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseColEtree.h +0 -206
  109. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +0 -370
  110. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +0 -722
  111. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +0 -150
  112. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +0 -342
  113. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseDiagonalProduct.h +0 -138
  114. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseDot.h +0 -98
  115. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseFuzzy.h +0 -29
  116. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseMap.h +0 -305
  117. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseMatrix.h +0 -1518
  118. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +0 -398
  119. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparsePermutation.h +0 -178
  120. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseProduct.h +0 -181
  121. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseRedux.h +0 -49
  122. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseRef.h +0 -397
  123. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +0 -659
  124. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseSolverBase.h +0 -124
  125. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +0 -198
  126. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseTranspose.h +0 -92
  127. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseTriangularView.h +0 -189
  128. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseUtil.h +0 -186
  129. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseVector.h +0 -478
  130. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseView.h +0 -254
  131. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/TriangularSolver.h +0 -315
  132. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU.h +0 -923
  133. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLUImpl.h +0 -66
  134. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +0 -226
  135. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_Structs.h +0 -110
  136. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +0 -375
  137. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_Utils.h +0 -80
  138. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_column_bmod.h +0 -181
  139. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +0 -179
  140. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +0 -107
  141. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +0 -280
  142. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +0 -126
  143. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +0 -130
  144. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +0 -223
  145. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_panel_dfs.h +0 -258
  146. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_pivotL.h +0 -137
  147. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_pruneL.h +0 -136
  148. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_relax_snode.h +0 -83
  149. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseQR/SparseQR.h +0 -758
  150. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/StlSupport/StdDeque.h +0 -116
  151. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/StlSupport/StdList.h +0 -106
  152. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/StlSupport/StdVector.h +0 -131
  153. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/StlSupport/details.h +0 -84
  154. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +0 -1025
  155. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +0 -642
  156. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/Image.h +0 -82
  157. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/Kernel.h +0 -79
  158. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/RealSvd2x2.h +0 -55
  159. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/blas.h +0 -440
  160. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/lapack.h +0 -152
  161. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/lapacke.h +0 -16292
  162. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/lapacke_mangling.h +0 -17
  163. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +0 -358
  164. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +0 -696
  165. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/BlockMethods.h +0 -1442
  166. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/CommonCwiseBinaryOps.h +0 -115
  167. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +0 -177
  168. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/IndexedViewMethods.h +0 -262
  169. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +0 -152
  170. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +0 -95
  171. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/ReshapedMethods.h +0 -149
  172. sequenzo/dissimilarity_measures/src/eigen/bench/BenchSparseUtil.h +0 -149
  173. sequenzo/dissimilarity_measures/src/eigen/bench/BenchTimer.h +0 -199
  174. sequenzo/dissimilarity_measures/src/eigen/bench/BenchUtil.h +0 -92
  175. sequenzo/dissimilarity_measures/src/eigen/bench/basicbenchmark.h +0 -63
  176. sequenzo/dissimilarity_measures/src/eigen/bench/btl/generic_bench/utils/utilities.h +0 -90
  177. sequenzo/dissimilarity_measures/src/eigen/bench/btl/libs/BLAS/blas.h +0 -675
  178. sequenzo/dissimilarity_measures/src/eigen/bench/btl/libs/BLAS/c_interface_base.h +0 -73
  179. sequenzo/dissimilarity_measures/src/eigen/bench/perf_monitoring/gemm_common.h +0 -67
  180. sequenzo/dissimilarity_measures/src/eigen/bench/perf_monitoring/gemv_common.h +0 -69
  181. sequenzo/dissimilarity_measures/src/eigen/bench/spbench/spbenchsolver.h +0 -573
  182. sequenzo/dissimilarity_measures/src/eigen/bench/spbench/spbenchstyle.h +0 -95
  183. sequenzo/dissimilarity_measures/src/eigen/bench/tensors/benchmark.h +0 -49
  184. sequenzo/dissimilarity_measures/src/eigen/bench/tensors/tensor_benchmarks.h +0 -597
  185. sequenzo/dissimilarity_measures/src/eigen/blas/BandTriangularSolver.h +0 -97
  186. sequenzo/dissimilarity_measures/src/eigen/blas/GeneralRank1Update.h +0 -44
  187. sequenzo/dissimilarity_measures/src/eigen/blas/PackedSelfadjointProduct.h +0 -53
  188. sequenzo/dissimilarity_measures/src/eigen/blas/PackedTriangularMatrixVector.h +0 -79
  189. sequenzo/dissimilarity_measures/src/eigen/blas/PackedTriangularSolverVector.h +0 -88
  190. sequenzo/dissimilarity_measures/src/eigen/blas/Rank2Update.h +0 -57
  191. sequenzo/dissimilarity_measures/src/eigen/blas/common.h +0 -175
  192. sequenzo/dissimilarity_measures/src/eigen/blas/f2c/datatypes.h +0 -24
  193. sequenzo/dissimilarity_measures/src/eigen/blas/level1_cplx_impl.h +0 -155
  194. sequenzo/dissimilarity_measures/src/eigen/blas/level1_impl.h +0 -144
  195. sequenzo/dissimilarity_measures/src/eigen/blas/level1_real_impl.h +0 -122
  196. sequenzo/dissimilarity_measures/src/eigen/blas/level2_cplx_impl.h +0 -360
  197. sequenzo/dissimilarity_measures/src/eigen/blas/level2_impl.h +0 -553
  198. sequenzo/dissimilarity_measures/src/eigen/blas/level2_real_impl.h +0 -306
  199. sequenzo/dissimilarity_measures/src/eigen/blas/level3_impl.h +0 -702
  200. sequenzo/dissimilarity_measures/src/eigen/debug/gdb/__init__.py +0 -1
  201. sequenzo/dissimilarity_measures/src/eigen/debug/gdb/printers.py +0 -314
  202. sequenzo/dissimilarity_measures/src/eigen/demos/mandelbrot/mandelbrot.h +0 -71
  203. sequenzo/dissimilarity_measures/src/eigen/demos/mix_eigen_and_c/binary_library.h +0 -71
  204. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/camera.h +0 -118
  205. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/gpuhelper.h +0 -207
  206. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/icosphere.h +0 -30
  207. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/quaternion_demo.h +0 -114
  208. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/trackball.h +0 -42
  209. sequenzo/dissimilarity_measures/src/eigen/lapack/lapack_common.h +0 -29
  210. sequenzo/dissimilarity_measures/src/eigen/scripts/relicense.py +0 -69
  211. sequenzo/dissimilarity_measures/src/eigen/test/AnnoyingScalar.h +0 -165
  212. sequenzo/dissimilarity_measures/src/eigen/test/MovableScalar.h +0 -35
  213. sequenzo/dissimilarity_measures/src/eigen/test/SafeScalar.h +0 -30
  214. sequenzo/dissimilarity_measures/src/eigen/test/bug1213.h +0 -8
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  398. {sequenzo-0.1.18.dist-info → sequenzo-0.1.20.dist-info}/licenses/LICENSE +0 -0
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@@ -1,738 +0,0 @@
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- // This file is part of Eigen, a lightweight C++ template library
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- // for linear algebra.
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- //
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- // Copyright (C) 2014 Benoit Steiner <benoit.steiner.goog@gmail.com>
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- //
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- // This Source Code Form is subject to the terms of the Mozilla
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- // Public License v. 2.0. If a copy of the MPL was not distributed
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- // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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-
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- #ifndef EIGEN_CXX11_TENSOR_TENSOR_INDEX_LIST_H
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- #define EIGEN_CXX11_TENSOR_TENSOR_INDEX_LIST_H
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-
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-
14
- #if EIGEN_HAS_CONSTEXPR && EIGEN_HAS_VARIADIC_TEMPLATES
15
-
16
- #define EIGEN_HAS_INDEX_LIST
17
-
18
- namespace Eigen {
19
-
20
- /** \internal
21
- *
22
- * \class TensorIndexList
23
- * \ingroup CXX11_Tensor_Module
24
- *
25
- * \brief Set of classes used to encode a set of Tensor dimensions/indices.
26
- *
27
- * The indices in the list can be known at compile time or at runtime. A mix
28
- * of static and dynamic indices can also be provided if needed. The tensor
29
- * code will attempt to take advantage of the indices that are known at
30
- * compile time to optimize the code it generates.
31
- *
32
- * This functionality requires a c++11 compliant compiler. If your compiler
33
- * is older you need to use arrays of indices instead.
34
- *
35
- * Several examples are provided in the cxx11_tensor_index_list.cpp file.
36
- *
37
- * \sa Tensor
38
- */
39
-
40
- template <Index n>
41
- struct type2index {
42
- static const Index value = n;
43
- EIGEN_DEVICE_FUNC constexpr operator Index() const { return n; }
44
- EIGEN_DEVICE_FUNC void set(Index val) {
45
- eigen_assert(val == n);
46
- }
47
- };
48
-
49
- // This can be used with IndexPairList to get compile-time constant pairs,
50
- // such as IndexPairList<type2indexpair<1,2>, type2indexpair<3,4>>().
51
- template <Index f, Index s>
52
- struct type2indexpair {
53
- static const Index first = f;
54
- static const Index second = s;
55
-
56
- constexpr EIGEN_DEVICE_FUNC operator IndexPair<Index>() const {
57
- return IndexPair<Index>(f, s);
58
- }
59
-
60
- EIGEN_DEVICE_FUNC void set(const IndexPair<Index>& val) {
61
- eigen_assert(val.first == f);
62
- eigen_assert(val.second == s);
63
- }
64
- };
65
-
66
-
67
- template<Index n> struct NumTraits<type2index<n> >
68
- {
69
- typedef Index Real;
70
- enum {
71
- IsComplex = 0,
72
- RequireInitialization = false,
73
- ReadCost = 1,
74
- AddCost = 1,
75
- MulCost = 1
76
- };
77
-
78
- EIGEN_DEVICE_FUNC static EIGEN_CONSTEXPR EIGEN_STRONG_INLINE Real epsilon() { return 0; }
79
- EIGEN_DEVICE_FUNC static EIGEN_CONSTEXPR EIGEN_STRONG_INLINE Real dummy_precision() { return 0; }
80
- EIGEN_DEVICE_FUNC static EIGEN_CONSTEXPR EIGEN_STRONG_INLINE Real highest() { return n; }
81
- EIGEN_DEVICE_FUNC static EIGEN_CONSTEXPR EIGEN_STRONG_INLINE Real lowest() { return n; }
82
- };
83
-
84
- namespace internal {
85
- template <typename T>
86
- EIGEN_DEVICE_FUNC void update_value(T& val, Index new_val) {
87
- val = internal::convert_index<T>(new_val);
88
- }
89
- template <Index n>
90
- EIGEN_DEVICE_FUNC void update_value(type2index<n>& val, Index new_val) {
91
- val.set(new_val);
92
- }
93
-
94
- template <typename T>
95
- EIGEN_DEVICE_FUNC void update_value(T& val, IndexPair<Index> new_val) {
96
- val = new_val;
97
- }
98
- template <Index f, Index s>
99
- EIGEN_DEVICE_FUNC void update_value(type2indexpair<f, s>& val, IndexPair<Index> new_val) {
100
- val.set(new_val);
101
- }
102
-
103
-
104
- template <typename T>
105
- struct is_compile_time_constant {
106
- static constexpr bool value = false;
107
- };
108
-
109
- template <Index idx>
110
- struct is_compile_time_constant<type2index<idx> > {
111
- static constexpr bool value = true;
112
- };
113
- template <Index idx>
114
- struct is_compile_time_constant<const type2index<idx> > {
115
- static constexpr bool value = true;
116
- };
117
- template <Index idx>
118
- struct is_compile_time_constant<type2index<idx>& > {
119
- static constexpr bool value = true;
120
- };
121
- template <Index idx>
122
- struct is_compile_time_constant<const type2index<idx>& > {
123
- static constexpr bool value = true;
124
- };
125
-
126
- template <Index f, Index s>
127
- struct is_compile_time_constant<type2indexpair<f, s> > {
128
- static constexpr bool value = true;
129
- };
130
- template <Index f, Index s>
131
- struct is_compile_time_constant<const type2indexpair<f, s> > {
132
- static constexpr bool value = true;
133
- };
134
- template <Index f, Index s>
135
- struct is_compile_time_constant<type2indexpair<f, s>& > {
136
- static constexpr bool value = true;
137
- };
138
- template <Index f, Index s>
139
- struct is_compile_time_constant<const type2indexpair<f, s>& > {
140
- static constexpr bool value = true;
141
- };
142
-
143
-
144
- template<typename... T>
145
- struct IndexTuple;
146
-
147
- template<typename T, typename... O>
148
- struct IndexTuple<T, O...> {
149
- EIGEN_DEVICE_FUNC constexpr IndexTuple() : head(), others() { }
150
- EIGEN_DEVICE_FUNC constexpr IndexTuple(const T& v, const O... o) : head(v), others(o...) { }
151
-
152
- constexpr static int count = 1 + sizeof...(O);
153
- T head;
154
- IndexTuple<O...> others;
155
- typedef T Head;
156
- typedef IndexTuple<O...> Other;
157
- };
158
-
159
- template<typename T>
160
- struct IndexTuple<T> {
161
- EIGEN_DEVICE_FUNC constexpr IndexTuple() : head() { }
162
- EIGEN_DEVICE_FUNC constexpr IndexTuple(const T& v) : head(v) { }
163
-
164
- constexpr static int count = 1;
165
- T head;
166
- typedef T Head;
167
- };
168
-
169
-
170
- template<int N, typename... T>
171
- struct IndexTupleExtractor;
172
-
173
- template<int N, typename T, typename... O>
174
- struct IndexTupleExtractor<N, T, O...> {
175
-
176
- typedef typename IndexTupleExtractor<N-1, O...>::ValType ValType;
177
-
178
- EIGEN_DEVICE_FUNC static constexpr ValType& get_val(IndexTuple<T, O...>& val) {
179
- return IndexTupleExtractor<N-1, O...>::get_val(val.others);
180
- }
181
-
182
- EIGEN_DEVICE_FUNC static constexpr const ValType& get_val(const IndexTuple<T, O...>& val) {
183
- return IndexTupleExtractor<N-1, O...>::get_val(val.others);
184
- }
185
- template <typename V>
186
- EIGEN_DEVICE_FUNC static void set_val(IndexTuple<T, O...>& val, V& new_val) {
187
- IndexTupleExtractor<N-1, O...>::set_val(val.others, new_val);
188
- }
189
-
190
- };
191
-
192
- template<typename T, typename... O>
193
- struct IndexTupleExtractor<0, T, O...> {
194
-
195
- typedef T ValType;
196
-
197
- EIGEN_DEVICE_FUNC static constexpr ValType& get_val(IndexTuple<T, O...>& val) {
198
- return val.head;
199
- }
200
- EIGEN_DEVICE_FUNC static constexpr const ValType& get_val(const IndexTuple<T, O...>& val) {
201
- return val.head;
202
- }
203
- template <typename V>
204
- EIGEN_DEVICE_FUNC static void set_val(IndexTuple<T, O...>& val, V& new_val) {
205
- val.head = new_val;
206
- }
207
- };
208
-
209
-
210
-
211
- template <int N, typename T, typename... O>
212
- EIGEN_DEVICE_FUNC constexpr typename IndexTupleExtractor<N, T, O...>::ValType& array_get(IndexTuple<T, O...>& tuple) {
213
- return IndexTupleExtractor<N, T, O...>::get_val(tuple);
214
- }
215
- template <int N, typename T, typename... O>
216
- EIGEN_DEVICE_FUNC constexpr const typename IndexTupleExtractor<N, T, O...>::ValType& array_get(const IndexTuple<T, O...>& tuple) {
217
- return IndexTupleExtractor<N, T, O...>::get_val(tuple);
218
- }
219
- template <typename T, typename... O>
220
- struct array_size<IndexTuple<T, O...> > {
221
- static const size_t value = IndexTuple<T, O...>::count;
222
- };
223
- template <typename T, typename... O>
224
- struct array_size<const IndexTuple<T, O...> > {
225
- static const size_t value = IndexTuple<T, O...>::count;
226
- };
227
-
228
-
229
-
230
-
231
- template <Index Idx, typename ValueT>
232
- struct tuple_coeff {
233
- template <typename... T>
234
- EIGEN_DEVICE_FUNC static constexpr ValueT get(const Index i, const IndexTuple<T...>& t) {
235
- // return array_get<Idx>(t) * (i == Idx) + tuple_coeff<Idx-1>::get(i, t) * (i != Idx);
236
- return (i == Idx ? array_get<Idx>(t) : tuple_coeff<Idx-1, ValueT>::get(i, t));
237
- }
238
- template <typename... T>
239
- EIGEN_DEVICE_FUNC static void set(const Index i, IndexTuple<T...>& t, const ValueT& value) {
240
- if (i == Idx) {
241
- update_value(array_get<Idx>(t), value);
242
- } else {
243
- tuple_coeff<Idx-1, ValueT>::set(i, t, value);
244
- }
245
- }
246
-
247
- template <typename... T>
248
- EIGEN_DEVICE_FUNC static constexpr bool value_known_statically(const Index i, const IndexTuple<T...>& t) {
249
- return ((i == Idx) & is_compile_time_constant<typename IndexTupleExtractor<Idx, T...>::ValType>::value) ||
250
- tuple_coeff<Idx-1, ValueT>::value_known_statically(i, t);
251
- }
252
-
253
- template <typename... T>
254
- EIGEN_DEVICE_FUNC static constexpr bool values_up_to_known_statically(const IndexTuple<T...>& t) {
255
- return is_compile_time_constant<typename IndexTupleExtractor<Idx, T...>::ValType>::value &&
256
- tuple_coeff<Idx-1, ValueT>::values_up_to_known_statically(t);
257
- }
258
-
259
- template <typename... T>
260
- EIGEN_DEVICE_FUNC static constexpr bool values_up_to_statically_known_to_increase(const IndexTuple<T...>& t) {
261
- return is_compile_time_constant<typename IndexTupleExtractor<Idx, T...>::ValType>::value &&
262
- is_compile_time_constant<typename IndexTupleExtractor<Idx, T...>::ValType>::value &&
263
- array_get<Idx>(t) > array_get<Idx-1>(t) &&
264
- tuple_coeff<Idx-1, ValueT>::values_up_to_statically_known_to_increase(t);
265
- }
266
- };
267
-
268
- template <typename ValueT>
269
- struct tuple_coeff<0, ValueT> {
270
- template <typename... T>
271
- EIGEN_DEVICE_FUNC static constexpr ValueT get(const Index /*i*/, const IndexTuple<T...>& t) {
272
- // eigen_assert (i == 0); // gcc fails to compile assertions in constexpr
273
- return array_get<0>(t)/* * (i == 0)*/;
274
- }
275
- template <typename... T>
276
- EIGEN_DEVICE_FUNC static void set(const Index i, IndexTuple<T...>& t, const ValueT value) {
277
- eigen_assert (i == 0);
278
- update_value(array_get<0>(t), value);
279
- }
280
- template <typename... T>
281
- EIGEN_DEVICE_FUNC static constexpr bool value_known_statically(const Index i, const IndexTuple<T...>&) {
282
- return is_compile_time_constant<typename IndexTupleExtractor<0, T...>::ValType>::value && (i == 0);
283
- }
284
-
285
- template <typename... T>
286
- EIGEN_DEVICE_FUNC static constexpr bool values_up_to_known_statically(const IndexTuple<T...>&) {
287
- return is_compile_time_constant<typename IndexTupleExtractor<0, T...>::ValType>::value;
288
- }
289
-
290
- template <typename... T>
291
- EIGEN_DEVICE_FUNC static constexpr bool values_up_to_statically_known_to_increase(const IndexTuple<T...>&) {
292
- return true;
293
- }
294
- };
295
- } // namespace internal
296
-
297
-
298
-
299
- template<typename FirstType, typename... OtherTypes>
300
- struct IndexList : internal::IndexTuple<FirstType, OtherTypes...> {
301
- EIGEN_STRONG_INLINE EIGEN_DEVICE_FUNC constexpr Index operator[] (const Index i) const {
302
- return internal::tuple_coeff<internal::array_size<internal::IndexTuple<FirstType, OtherTypes...> >::value-1, Index>::get(i, *this);
303
- }
304
- EIGEN_STRONG_INLINE EIGEN_DEVICE_FUNC constexpr Index get(const Index i) const {
305
- return internal::tuple_coeff<internal::array_size<internal::IndexTuple<FirstType, OtherTypes...> >::value-1, Index>::get(i, *this);
306
- }
307
- EIGEN_STRONG_INLINE EIGEN_DEVICE_FUNC void set(const Index i, const Index value) {
308
- return internal::tuple_coeff<internal::array_size<internal::IndexTuple<FirstType, OtherTypes...> >::value-1, Index>::set(i, *this, value);
309
- }
310
-
311
- EIGEN_DEVICE_FUNC constexpr IndexList(const internal::IndexTuple<FirstType, OtherTypes...>& other) : internal::IndexTuple<FirstType, OtherTypes...>(other) { }
312
- EIGEN_DEVICE_FUNC constexpr IndexList(FirstType& first, OtherTypes... other) : internal::IndexTuple<FirstType, OtherTypes...>(first, other...) { }
313
- EIGEN_DEVICE_FUNC constexpr IndexList() : internal::IndexTuple<FirstType, OtherTypes...>() { }
314
-
315
- EIGEN_DEVICE_FUNC constexpr bool value_known_statically(const Index i) const {
316
- return internal::tuple_coeff<internal::array_size<internal::IndexTuple<FirstType, OtherTypes...> >::value-1, Index>::value_known_statically(i, *this);
317
- }
318
- EIGEN_DEVICE_FUNC constexpr bool all_values_known_statically() const {
319
- return internal::tuple_coeff<internal::array_size<internal::IndexTuple<FirstType, OtherTypes...> >::value-1, Index>::values_up_to_known_statically(*this);
320
- }
321
-
322
- EIGEN_DEVICE_FUNC constexpr bool values_statically_known_to_increase() const {
323
- return internal::tuple_coeff<internal::array_size<internal::IndexTuple<FirstType, OtherTypes...> >::value-1, Index>::values_up_to_statically_known_to_increase(*this);
324
- }
325
- };
326
-
327
- template <typename FirstType, typename... OtherTypes>
328
- std::ostream& operator<<(std::ostream& os,
329
- const IndexList<FirstType, OtherTypes...>& dims) {
330
- os << "[";
331
- for (size_t i = 0; i < 1 + sizeof...(OtherTypes); ++i) {
332
- if (i > 0) os << ", ";
333
- os << dims[i];
334
- }
335
- os << "]";
336
- return os;
337
- }
338
-
339
- template<typename FirstType, typename... OtherTypes>
340
- constexpr IndexList<FirstType, OtherTypes...> make_index_list(FirstType val1, OtherTypes... other_vals) {
341
- return IndexList<FirstType, OtherTypes...>(val1, other_vals...);
342
- }
343
-
344
-
345
- template<typename FirstType, typename... OtherTypes>
346
- struct IndexPairList : internal::IndexTuple<FirstType, OtherTypes...> {
347
- EIGEN_STRONG_INLINE EIGEN_DEVICE_FUNC constexpr IndexPair<Index> operator[] (const Index i) const {
348
- return internal::tuple_coeff<internal::array_size<internal::IndexTuple<FirstType, OtherTypes...> >::value-1, IndexPair<Index>>::get(i, *this);
349
- }
350
- EIGEN_STRONG_INLINE EIGEN_DEVICE_FUNC void set(const Index i, const IndexPair<Index> value) {
351
- return internal::tuple_coeff<internal::array_size<internal::IndexTuple<FirstType, OtherTypes...>>::value-1, IndexPair<Index> >::set(i, *this, value);
352
- }
353
-
354
- EIGEN_DEVICE_FUNC constexpr IndexPairList(const internal::IndexTuple<FirstType, OtherTypes...>& other) : internal::IndexTuple<FirstType, OtherTypes...>(other) { }
355
- EIGEN_DEVICE_FUNC constexpr IndexPairList() : internal::IndexTuple<FirstType, OtherTypes...>() { }
356
-
357
- EIGEN_DEVICE_FUNC constexpr bool value_known_statically(const Index i) const {
358
- return internal::tuple_coeff<internal::array_size<internal::IndexTuple<FirstType, OtherTypes...> >::value-1, Index>::value_known_statically(i, *this);
359
- }
360
- };
361
-
362
- namespace internal {
363
-
364
- template<typename FirstType, typename... OtherTypes>
365
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Index array_prod(const IndexList<FirstType, OtherTypes...>& sizes) {
366
- Index result = 1;
367
- EIGEN_UNROLL_LOOP
368
- for (size_t i = 0; i < array_size<IndexList<FirstType, OtherTypes...> >::value; ++i) {
369
- result *= sizes[i];
370
- }
371
- return result;
372
- }
373
-
374
- template<typename FirstType, typename... OtherTypes> struct array_size<IndexList<FirstType, OtherTypes...> > {
375
- static const size_t value = array_size<IndexTuple<FirstType, OtherTypes...> >::value;
376
- };
377
- template<typename FirstType, typename... OtherTypes> struct array_size<const IndexList<FirstType, OtherTypes...> > {
378
- static const size_t value = array_size<IndexTuple<FirstType, OtherTypes...> >::value;
379
- };
380
-
381
- template<typename FirstType, typename... OtherTypes> struct array_size<IndexPairList<FirstType, OtherTypes...> > {
382
- static const size_t value = std::tuple_size<std::tuple<FirstType, OtherTypes...> >::value;
383
- };
384
- template<typename FirstType, typename... OtherTypes> struct array_size<const IndexPairList<FirstType, OtherTypes...> > {
385
- static const size_t value = std::tuple_size<std::tuple<FirstType, OtherTypes...> >::value;
386
- };
387
-
388
- template<Index N, typename FirstType, typename... OtherTypes> EIGEN_DEVICE_FUNC constexpr Index array_get(IndexList<FirstType, OtherTypes...>& a) {
389
- return IndexTupleExtractor<N, FirstType, OtherTypes...>::get_val(a);
390
- }
391
- template<Index N, typename FirstType, typename... OtherTypes> EIGEN_DEVICE_FUNC constexpr Index array_get(const IndexList<FirstType, OtherTypes...>& a) {
392
- return IndexTupleExtractor<N, FirstType, OtherTypes...>::get_val(a);
393
- }
394
-
395
- template <typename T>
396
- struct index_known_statically_impl {
397
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index) {
398
- return false;
399
- }
400
- };
401
-
402
- template <typename FirstType, typename... OtherTypes>
403
- struct index_known_statically_impl<IndexList<FirstType, OtherTypes...> > {
404
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i) {
405
- return IndexList<FirstType, OtherTypes...>().value_known_statically(i);
406
- }
407
- };
408
-
409
- template <typename FirstType, typename... OtherTypes>
410
- struct index_known_statically_impl<const IndexList<FirstType, OtherTypes...> > {
411
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i) {
412
- return IndexList<FirstType, OtherTypes...>().value_known_statically(i);
413
- }
414
- };
415
-
416
-
417
- template <typename T>
418
- struct all_indices_known_statically_impl {
419
- static constexpr bool run() {
420
- return false;
421
- }
422
- };
423
-
424
- template <typename FirstType, typename... OtherTypes>
425
- struct all_indices_known_statically_impl<IndexList<FirstType, OtherTypes...> > {
426
- EIGEN_DEVICE_FUNC static constexpr bool run() {
427
- return IndexList<FirstType, OtherTypes...>().all_values_known_statically();
428
- }
429
- };
430
-
431
- template <typename FirstType, typename... OtherTypes>
432
- struct all_indices_known_statically_impl<const IndexList<FirstType, OtherTypes...> > {
433
- EIGEN_DEVICE_FUNC static constexpr bool run() {
434
- return IndexList<FirstType, OtherTypes...>().all_values_known_statically();
435
- }
436
- };
437
-
438
-
439
- template <typename T>
440
- struct indices_statically_known_to_increase_impl {
441
- EIGEN_DEVICE_FUNC static constexpr bool run() {
442
- return false;
443
- }
444
- };
445
-
446
- template <typename FirstType, typename... OtherTypes>
447
- struct indices_statically_known_to_increase_impl<IndexList<FirstType, OtherTypes...> > {
448
- EIGEN_DEVICE_FUNC static constexpr bool run() {
449
- return Eigen::IndexList<FirstType, OtherTypes...>().values_statically_known_to_increase();
450
- }
451
- };
452
-
453
- template <typename FirstType, typename... OtherTypes>
454
- struct indices_statically_known_to_increase_impl<const IndexList<FirstType, OtherTypes...> > {
455
- EIGEN_DEVICE_FUNC static constexpr bool run() {
456
- return Eigen::IndexList<FirstType, OtherTypes...>().values_statically_known_to_increase();
457
- }
458
- };
459
-
460
-
461
- template <typename Tx>
462
- struct index_statically_eq_impl {
463
- EIGEN_DEVICE_FUNC static constexpr bool run(Index, Index) {
464
- return false;
465
- }
466
- };
467
-
468
- template <typename FirstType, typename... OtherTypes>
469
- struct index_statically_eq_impl<IndexList<FirstType, OtherTypes...> > {
470
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i, const Index value) {
471
- return IndexList<FirstType, OtherTypes...>().value_known_statically(i) &
472
- (IndexList<FirstType, OtherTypes...>().get(i) == value);
473
- }
474
- };
475
-
476
- template <typename FirstType, typename... OtherTypes>
477
- struct index_statically_eq_impl<const IndexList<FirstType, OtherTypes...> > {
478
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i, const Index value) {
479
- return IndexList<FirstType, OtherTypes...>().value_known_statically(i) &
480
- (IndexList<FirstType, OtherTypes...>().get(i) == value);
481
- }
482
- };
483
-
484
-
485
- template <typename T>
486
- struct index_statically_ne_impl {
487
- EIGEN_DEVICE_FUNC static constexpr bool run(Index, Index) {
488
- return false;
489
- }
490
- };
491
-
492
- template <typename FirstType, typename... OtherTypes>
493
- struct index_statically_ne_impl<IndexList<FirstType, OtherTypes...> > {
494
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i, const Index value) {
495
- return IndexList<FirstType, OtherTypes...>().value_known_statically(i) &
496
- (IndexList<FirstType, OtherTypes...>().get(i) != value);
497
- }
498
- };
499
-
500
- template <typename FirstType, typename... OtherTypes>
501
- struct index_statically_ne_impl<const IndexList<FirstType, OtherTypes...> > {
502
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i, const Index value) {
503
- return IndexList<FirstType, OtherTypes...>().value_known_statically(i) &
504
- (IndexList<FirstType, OtherTypes...>().get(i) != value);
505
- }
506
- };
507
-
508
-
509
- template <typename T>
510
- struct index_statically_gt_impl {
511
- EIGEN_DEVICE_FUNC static constexpr bool run(Index, Index) {
512
- return false;
513
- }
514
- };
515
-
516
- template <typename FirstType, typename... OtherTypes>
517
- struct index_statically_gt_impl<IndexList<FirstType, OtherTypes...> > {
518
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i, const Index value) {
519
- return IndexList<FirstType, OtherTypes...>().value_known_statically(i) &
520
- (IndexList<FirstType, OtherTypes...>().get(i) > value);
521
- }
522
- };
523
-
524
- template <typename FirstType, typename... OtherTypes>
525
- struct index_statically_gt_impl<const IndexList<FirstType, OtherTypes...> > {
526
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i, const Index value) {
527
- return IndexList<FirstType, OtherTypes...>().value_known_statically(i) &
528
- (IndexList<FirstType, OtherTypes...>().get(i) > value);
529
- }
530
- };
531
-
532
-
533
-
534
- template <typename T>
535
- struct index_statically_lt_impl {
536
- EIGEN_DEVICE_FUNC static constexpr bool run(Index, Index) {
537
- return false;
538
- }
539
- };
540
-
541
- template <typename FirstType, typename... OtherTypes>
542
- struct index_statically_lt_impl<IndexList<FirstType, OtherTypes...> > {
543
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i, const Index value) {
544
- return IndexList<FirstType, OtherTypes...>().value_known_statically(i) &
545
- (IndexList<FirstType, OtherTypes...>().get(i) < value);
546
- }
547
- };
548
-
549
- template <typename FirstType, typename... OtherTypes>
550
- struct index_statically_lt_impl<const IndexList<FirstType, OtherTypes...> > {
551
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i, const Index value) {
552
- return IndexList<FirstType, OtherTypes...>().value_known_statically(i) &
553
- (IndexList<FirstType, OtherTypes...>().get(i) < value);
554
- }
555
- };
556
-
557
-
558
-
559
- template <typename Tx>
560
- struct index_pair_first_statically_eq_impl {
561
- EIGEN_DEVICE_FUNC static constexpr bool run(Index, Index) {
562
- return false;
563
- }
564
- };
565
-
566
- template <typename FirstType, typename... OtherTypes>
567
- struct index_pair_first_statically_eq_impl<IndexPairList<FirstType, OtherTypes...> > {
568
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i, const Index value) {
569
- return IndexPairList<FirstType, OtherTypes...>().value_known_statically(i) &
570
- (IndexPairList<FirstType, OtherTypes...>().operator[](i).first == value);
571
- }
572
- };
573
-
574
- template <typename FirstType, typename... OtherTypes>
575
- struct index_pair_first_statically_eq_impl<const IndexPairList<FirstType, OtherTypes...> > {
576
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i, const Index value) {
577
- return IndexPairList<FirstType, OtherTypes...>().value_known_statically(i) &
578
- (IndexPairList<FirstType, OtherTypes...>().operator[](i).first == value);
579
- }
580
- };
581
-
582
-
583
-
584
- template <typename Tx>
585
- struct index_pair_second_statically_eq_impl {
586
- EIGEN_DEVICE_FUNC static constexpr bool run(Index, Index) {
587
- return false;
588
- }
589
- };
590
-
591
- template <typename FirstType, typename... OtherTypes>
592
- struct index_pair_second_statically_eq_impl<IndexPairList<FirstType, OtherTypes...> > {
593
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i, const Index value) {
594
- return IndexPairList<FirstType, OtherTypes...>().value_known_statically(i) &
595
- (IndexPairList<FirstType, OtherTypes...>().operator[](i).second == value);
596
- }
597
- };
598
-
599
- template <typename FirstType, typename... OtherTypes>
600
- struct index_pair_second_statically_eq_impl<const IndexPairList<FirstType, OtherTypes...> > {
601
- EIGEN_DEVICE_FUNC static constexpr bool run(const Index i, const Index value) {
602
- return IndexPairList<FirstType, OtherTypes...>().value_known_statically(i) &
603
- (IndexPairList<FirstType, OtherTypes...>().operator[](i).second == value);
604
- }
605
- };
606
-
607
-
608
- } // end namespace internal
609
- } // end namespace Eigen
610
-
611
- #else
612
-
613
- namespace Eigen {
614
- namespace internal {
615
-
616
- template <typename T>
617
- struct index_known_statically_impl {
618
- static EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE bool run(const Index) {
619
- return false;
620
- }
621
- };
622
-
623
- template <typename T>
624
- struct all_indices_known_statically_impl {
625
- static EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE bool run() {
626
- return false;
627
- }
628
- };
629
-
630
- template <typename T>
631
- struct indices_statically_known_to_increase_impl {
632
- static EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE bool run() {
633
- return false;
634
- }
635
- };
636
-
637
- template <typename T>
638
- struct index_statically_eq_impl {
639
- static EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE bool run(Index, Index) {
640
- return false;
641
- }
642
- };
643
-
644
- template <typename T>
645
- struct index_statically_ne_impl {
646
- static EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE bool run(Index, Index) {
647
- return false;
648
- }
649
- };
650
-
651
- template <typename T>
652
- struct index_statically_gt_impl {
653
- static EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE bool run(Index, Index) {
654
- return false;
655
- }
656
- };
657
-
658
- template <typename T>
659
- struct index_statically_lt_impl {
660
- static EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE bool run(Index, Index) {
661
- return false;
662
- }
663
- };
664
-
665
- template <typename Tx>
666
- struct index_pair_first_statically_eq_impl {
667
- static EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE bool run(Index, Index) {
668
- return false;
669
- }
670
- };
671
-
672
- template <typename Tx>
673
- struct index_pair_second_statically_eq_impl {
674
- static EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE bool run(Index, Index) {
675
- return false;
676
- }
677
- };
678
-
679
-
680
-
681
- } // end namespace internal
682
- } // end namespace Eigen
683
-
684
- #endif
685
-
686
-
687
- namespace Eigen {
688
- namespace internal {
689
- template <typename T>
690
- static EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR bool index_known_statically(Index i) {
691
- return index_known_statically_impl<T>::run(i);
692
- }
693
-
694
- template <typename T>
695
- static EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR bool all_indices_known_statically() {
696
- return all_indices_known_statically_impl<T>::run();
697
- }
698
-
699
- template <typename T>
700
- static EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR bool indices_statically_known_to_increase() {
701
- return indices_statically_known_to_increase_impl<T>::run();
702
- }
703
-
704
- template <typename T>
705
- static EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR bool index_statically_eq(Index i, Index value) {
706
- return index_statically_eq_impl<T>::run(i, value);
707
- }
708
-
709
- template <typename T>
710
- static EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR bool index_statically_ne(Index i, Index value) {
711
- return index_statically_ne_impl<T>::run(i, value);
712
- }
713
-
714
- template <typename T>
715
- static EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR bool index_statically_gt(Index i, Index value) {
716
- return index_statically_gt_impl<T>::run(i, value);
717
- }
718
-
719
- template <typename T>
720
- static EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR bool index_statically_lt(Index i, Index value) {
721
- return index_statically_lt_impl<T>::run(i, value);
722
- }
723
-
724
- template <typename T>
725
- static EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR bool index_pair_first_statically_eq(Index i, Index value) {
726
- return index_pair_first_statically_eq_impl<T>::run(i, value);
727
- }
728
-
729
- template <typename T>
730
- static EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR bool index_pair_second_statically_eq(Index i, Index value) {
731
- return index_pair_second_statically_eq_impl<T>::run(i, value);
732
- }
733
-
734
- } // end namespace internal
735
- } // end namespace Eigen
736
-
737
-
738
- #endif // EIGEN_CXX11_TENSOR_TENSOR_INDEX_LIST_H