sequenzo 0.1.18__cp310-cp310-macosx_10_9_universal2.whl → 0.1.19__cp310-cp310-macosx_10_9_universal2.whl

sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorChipping.h

@@ -1,518 +0,0 @@
-// This file is part of Eigen, a lightweight C++ template library
-// for linear algebra.
-//
-// Copyright (C) 2014 Benoit Steiner <benoit.steiner.goog@gmail.com>
-//
-// This Source Code Form is subject to the terms of the Mozilla
-// Public License v. 2.0. If a copy of the MPL was not distributed
-// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
-
-#ifndef EIGEN_CXX11_TENSOR_TENSOR_CHIPPING_H
-#define EIGEN_CXX11_TENSOR_TENSOR_CHIPPING_H
-
-namespace Eigen {
-
-/** \class TensorKChippingReshaping
-  * \ingroup CXX11_Tensor_Module
-  *
-  * \brief A chip is a thin slice, corresponding to a column or a row in a 2-d tensor.
-  *
-  *
-  */
-
-namespace internal {
-template<DenseIndex DimId, typename XprType>
-struct traits<TensorChippingOp<DimId, XprType> > : public traits<XprType>
-{
-  typedef typename XprType::Scalar Scalar;
-  typedef traits<XprType> XprTraits;
-  typedef typename XprTraits::StorageKind StorageKind;
-  typedef typename XprTraits::Index Index;
-  typedef typename XprType::Nested Nested;
-  typedef typename remove_reference<Nested>::type _Nested;
-  static const int NumDimensions = XprTraits::NumDimensions - 1;
-  static const int Layout = XprTraits::Layout;
-  typedef typename XprTraits::PointerType PointerType;
-};
-
-template<DenseIndex DimId, typename XprType>
-struct eval<TensorChippingOp<DimId, XprType>, Eigen::Dense>
-{
-  typedef const TensorChippingOp<DimId, XprType> EIGEN_DEVICE_REF type;
-};
-
-template<DenseIndex DimId, typename XprType>
-struct nested<TensorChippingOp<DimId, XprType>, 1, typename eval<TensorChippingOp<DimId, XprType> >::type>
-{
-  typedef TensorChippingOp<DimId, XprType> type;
-};
-
-template <DenseIndex DimId>
-struct DimensionId
-{
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE DimensionId(DenseIndex dim) {
-    EIGEN_UNUSED_VARIABLE(dim);
-    eigen_assert(dim == DimId);
-  }
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE DenseIndex actualDim() const {
-    return DimId;
-  }
-};
-template <>
-struct DimensionId<Dynamic>
-{
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE DimensionId(DenseIndex dim) : actual_dim(dim) {
-    eigen_assert(dim >= 0);
-  }
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE DenseIndex actualDim() const {
-    return actual_dim;
-  }
- private:
-  const DenseIndex actual_dim;
-};
-
-
-}  // end namespace internal
-
-
-
-template<DenseIndex DimId, typename XprType>
-class TensorChippingOp : public TensorBase<TensorChippingOp<DimId, XprType> >
-{
-  public:
-    typedef TensorBase<TensorChippingOp<DimId, XprType> > Base;
-    typedef typename Eigen::internal::traits<TensorChippingOp>::Scalar Scalar;
-    typedef typename Eigen::NumTraits<Scalar>::Real RealScalar;
-    typedef typename XprType::CoeffReturnType CoeffReturnType;
-    typedef typename Eigen::internal::nested<TensorChippingOp>::type Nested;
-    typedef typename Eigen::internal::traits<TensorChippingOp>::StorageKind StorageKind;
-    typedef typename Eigen::internal::traits<TensorChippingOp>::Index Index;
-
-    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE TensorChippingOp(const XprType& expr, const Index offset, const Index dim)
-        : m_xpr(expr), m_offset(offset), m_dim(dim) {
-    }
-
-    EIGEN_DEVICE_FUNC
-    const Index offset() const { return m_offset; }
-    EIGEN_DEVICE_FUNC
-    const Index dim() const { return m_dim.actualDim(); }
-
-    EIGEN_DEVICE_FUNC
-    const typename internal::remove_all<typename XprType::Nested>::type&
-    expression() const { return m_xpr; }
-
-    EIGEN_TENSOR_INHERIT_ASSIGNMENT_OPERATORS(TensorChippingOp)
-
-  protected:
-    typename XprType::Nested m_xpr;
-    const Index m_offset;
-    const internal::DimensionId<DimId> m_dim;
-};
-
-
-// Eval as rvalue
-template<DenseIndex DimId, typename ArgType, typename Device>
-struct TensorEvaluator<const TensorChippingOp<DimId, ArgType>, Device>
-{
-  typedef TensorChippingOp<DimId, ArgType> XprType;
-  static const int NumInputDims = internal::array_size<typename TensorEvaluator<ArgType, Device>::Dimensions>::value;
-  static const int NumDims = NumInputDims-1;
-  typedef typename XprType::Index Index;
-  typedef DSizes<Index, NumDims> Dimensions;
-  typedef typename XprType::Scalar Scalar;
-  typedef typename XprType::CoeffReturnType CoeffReturnType;
-  typedef typename PacketType<CoeffReturnType, Device>::type PacketReturnType;
-  static const int PacketSize = PacketType<CoeffReturnType, Device>::size;
-  typedef StorageMemory<CoeffReturnType, Device> Storage;
-  typedef typename Storage::Type EvaluatorPointerType;
-
-  enum {
-    // Alignment can't be guaranteed at compile time since it depends on the
-    // slice offsets.
-    IsAligned         = false,
-    Layout            = TensorEvaluator<ArgType, Device>::Layout,
-    PacketAccess      = TensorEvaluator<ArgType, Device>::PacketAccess,
-    BlockAccess       = TensorEvaluator<ArgType, Device>::BlockAccess,
-    // Chipping of outer-most dimension is a trivial operation, because we can
-    // read and write directly from the underlying tensor using single offset.
-    IsOuterChipping   = (static_cast<int>(Layout) == ColMajor && DimId == NumInputDims - 1) ||
-                        (static_cast<int>(Layout) == RowMajor && DimId == 0),
-    // Chipping inner-most dimension.
-    IsInnerChipping   = (static_cast<int>(Layout) == ColMajor && DimId == 0) ||
-                        (static_cast<int>(Layout) == RowMajor && DimId == NumInputDims - 1),
-    // Prefer block access if the underlying expression prefers it, otherwise
-    // only if chipping is not trivial.
-    PreferBlockAccess = TensorEvaluator<ArgType, Device>::PreferBlockAccess ||
-                        !IsOuterChipping,
-    CoordAccess       = false,  // to be implemented
-    RawAccess         = false
-  };
-
-  typedef typename internal::remove_const<Scalar>::type ScalarNoConst;
-
-  //===- Tensor block evaluation strategy (see TensorBlock.h) -------------===//
-  typedef internal::TensorBlockDescriptor<NumDims, Index> TensorBlockDesc;
-  typedef internal::TensorBlockScratchAllocator<Device> TensorBlockScratch;
-
-  typedef internal::TensorBlockDescriptor<NumInputDims, Index>
-      ArgTensorBlockDesc;
-  typedef typename TensorEvaluator<const ArgType, Device>::TensorBlock
-      ArgTensorBlock;
-
-  typedef typename internal::TensorMaterializedBlock<ScalarNoConst, NumDims,
-                                                     Layout, Index>
-      TensorBlock;
-  //===--------------------------------------------------------------------===//
-
-  EIGEN_STRONG_INLINE TensorEvaluator(const XprType& op, const Device& device)
-      : m_impl(op.expression(), device), m_dim(op.dim()), m_device(device)
-  {
-    EIGEN_STATIC_ASSERT((NumInputDims >= 1), YOU_MADE_A_PROGRAMMING_MISTAKE);
-    eigen_assert(NumInputDims > m_dim.actualDim());
-
-    const typename TensorEvaluator<ArgType, Device>::Dimensions& input_dims = m_impl.dimensions();
-    eigen_assert(op.offset() < input_dims[m_dim.actualDim()]);
-
-    int j = 0;
-    for (int i = 0; i < NumInputDims; ++i) {
-      if (i != m_dim.actualDim()) {
-        m_dimensions[j] = input_dims[i];
-        ++j;
-      }
-    }
-
-    m_stride = 1;
-    m_inputStride = 1;
-    if (static_cast<int>(Layout) == static_cast<int>(ColMajor)) {
-      for (int i = 0; i < m_dim.actualDim(); ++i) {
-        m_stride *= input_dims[i];
-        m_inputStride *= input_dims[i];
-      }
-    } else {
-      for (int i = NumInputDims-1; i > m_dim.actualDim(); --i) {
-        m_stride *= input_dims[i];
-        m_inputStride *= input_dims[i];
-      }
-    }
-    m_inputStride *= input_dims[m_dim.actualDim()];
-    m_inputOffset = m_stride * op.offset();
-  }
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Dimensions& dimensions() const { return m_dimensions; }
-
-  EIGEN_STRONG_INLINE bool evalSubExprsIfNeeded(EvaluatorPointerType) {
-    m_impl.evalSubExprsIfNeeded(NULL);
-    return true;
-  }
-
-  EIGEN_STRONG_INLINE void cleanup() {
-    m_impl.cleanup();
-  }
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE CoeffReturnType coeff(Index index) const
-  {
-    return m_impl.coeff(srcCoeff(index));
-  }
-
-  template<int LoadMode>
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE PacketReturnType packet(Index index) const
-  {
-    EIGEN_STATIC_ASSERT((PacketSize > 1), YOU_MADE_A_PROGRAMMING_MISTAKE)
-    eigen_assert(index+PacketSize-1 < dimensions().TotalSize());
-
-    if (isInnerChipping()) {
-      // m_stride is equal to 1, so let's avoid the integer division.
-      eigen_assert(m_stride == 1);
-      Index inputIndex = index * m_inputStride + m_inputOffset;
-      EIGEN_ALIGN_MAX typename internal::remove_const<CoeffReturnType>::type values[PacketSize];
-      EIGEN_UNROLL_LOOP
-      for (int i = 0; i < PacketSize; ++i) {
-        values[i] = m_impl.coeff(inputIndex);
-        inputIndex += m_inputStride;
-      }
-      PacketReturnType rslt = internal::pload<PacketReturnType>(values);
-      return rslt;
-    } else if (isOuterChipping()) {
-      // m_stride is always greater than index, so let's avoid the integer division.
-      eigen_assert(m_stride > index);
-      return m_impl.template packet<LoadMode>(index + m_inputOffset);
-    } else {
-      const Index idx = index / m_stride;
-      const Index rem = index - idx * m_stride;
-      if (rem + PacketSize <= m_stride) {
-        Index inputIndex = idx * m_inputStride + m_inputOffset + rem;
-        return m_impl.template packet<LoadMode>(inputIndex);
-      } else {
-        // Cross the stride boundary. Fallback to slow path.
-        EIGEN_ALIGN_MAX typename internal::remove_const<CoeffReturnType>::type values[PacketSize];
-       EIGEN_UNROLL_LOOP
-        for (int i = 0; i < PacketSize; ++i) {
-          values[i] = coeff(index);
-          ++index;
-        }
-        PacketReturnType rslt = internal::pload<PacketReturnType>(values);
-        return rslt;
-      }
-    }
-  }
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE TensorOpCost
-  costPerCoeff(bool vectorized) const {
-    double cost = 0;
-    if ((static_cast<int>(Layout) == static_cast<int>(ColMajor) &&
-         m_dim.actualDim() == 0) ||
-        (static_cast<int>(Layout) == static_cast<int>(RowMajor) &&
-         m_dim.actualDim() == NumInputDims - 1)) {
-      cost += TensorOpCost::MulCost<Index>() + TensorOpCost::AddCost<Index>();
-    } else if ((static_cast<int>(Layout) == static_cast<int>(ColMajor) &&
-                m_dim.actualDim() == NumInputDims - 1) ||
-               (static_cast<int>(Layout) == static_cast<int>(RowMajor) &&
-                m_dim.actualDim() == 0)) {
-      cost += TensorOpCost::AddCost<Index>();
-    } else {
-      cost += 3 * TensorOpCost::MulCost<Index>() + TensorOpCost::DivCost<Index>() +
-              3 * TensorOpCost::AddCost<Index>();
-    }
-
-    return m_impl.costPerCoeff(vectorized) +
-           TensorOpCost(0, 0, cost, vectorized, PacketSize);
-  }
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
-  internal::TensorBlockResourceRequirements getResourceRequirements() const {
-    const size_t target_size = m_device.lastLevelCacheSize();
-    return internal::TensorBlockResourceRequirements::merge(
-        internal::TensorBlockResourceRequirements::skewed<Scalar>(target_size),
-        m_impl.getResourceRequirements());
-  }
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE TensorBlock
-  block(TensorBlockDesc& desc, TensorBlockScratch& scratch,
-          bool root_of_expr_ast = false) const {
-    const Index chip_dim = m_dim.actualDim();
-
-    DSizes<Index, NumInputDims> input_block_dims;
-    for (int i = 0; i < NumInputDims; ++i) {
-      input_block_dims[i]
-            = i < chip_dim ? desc.dimension(i)
-            : i > chip_dim ? desc.dimension(i - 1)
-            : 1;
-    }
-
-    ArgTensorBlockDesc arg_desc(srcCoeff(desc.offset()), input_block_dims);
-
-    // Try to reuse destination buffer for materializing argument block.
-    if (desc.HasDestinationBuffer()) {
-      DSizes<Index, NumInputDims> arg_destination_strides;
-      for (int i = 0; i < NumInputDims; ++i) {
-      arg_destination_strides[i]
-            = i < chip_dim ? desc.destination().strides()[i]
-            : i > chip_dim ? desc.destination().strides()[i - 1]
-            : 0; // for dimensions of size `1` stride should never be used.
-      }
-
-      arg_desc.template AddDestinationBuffer<Layout>(
-          desc.destination().template data<ScalarNoConst>(),
-          arg_destination_strides);
-    }
-
-    ArgTensorBlock arg_block = m_impl.block(arg_desc, scratch, root_of_expr_ast);
-    if (!arg_desc.HasDestinationBuffer()) desc.DropDestinationBuffer();
-
-    if (arg_block.data() != NULL) {
-      // Forward argument block buffer if possible.
-      return TensorBlock(arg_block.kind(), arg_block.data(),
-                           desc.dimensions());
-
-    } else {
-      // Assign argument block expression to a buffer.
-
-      // Prepare storage for the materialized chipping result.
-      const typename TensorBlock::Storage block_storage =
-          TensorBlock::prepareStorage(desc, scratch);
-
-      typedef internal::TensorBlockAssignment<
-          ScalarNoConst, NumInputDims, typename ArgTensorBlock::XprType, Index>
-          TensorBlockAssignment;
-
-      TensorBlockAssignment::Run(
-          TensorBlockAssignment::target(
-              arg_desc.dimensions(),
-              internal::strides<Layout>(arg_desc.dimensions()),
-              block_storage.data()),
-          arg_block.expr());
-
-      return block_storage.AsTensorMaterializedBlock();
-    }
-  }
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE typename Storage::Type data() const {
-    typename Storage::Type result = constCast(m_impl.data());
-    if (isOuterChipping() && result) {
-      return result + m_inputOffset;
-    } else {
-      return NULL;
-    }
-  }
-#ifdef EIGEN_USE_SYCL
-  // binding placeholder accessors to a command group handler for SYCL
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void bind(cl::sycl::handler &cgh) const {
-    m_impl.bind(cgh);
-  }
-#endif
-
- protected:
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Index srcCoeff(Index index) const
-  {
-    Index inputIndex;
-    if (isInnerChipping()) {
-      // m_stride is equal to 1, so let's avoid the integer division.
-      eigen_assert(m_stride == 1);
-      inputIndex = index * m_inputStride + m_inputOffset;
-    } else if (isOuterChipping()) {
-      // m_stride is always greater than index, so let's avoid the integer
-      // division.
-      eigen_assert(m_stride > index);
-      inputIndex = index + m_inputOffset;
-    } else {
-      const Index idx = index / m_stride;
-      inputIndex = idx * m_inputStride + m_inputOffset;
-      index -= idx * m_stride;
-      inputIndex += index;
-    }
-    return inputIndex;
-  }
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE bool isInnerChipping() const {
-    return IsInnerChipping ||
-           (static_cast<int>(Layout) == ColMajor && m_dim.actualDim() == 0) ||
-           (static_cast<int>(Layout) == RowMajor && m_dim.actualDim() == NumInputDims - 1);
-  }
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE bool isOuterChipping() const {
-    return IsOuterChipping ||
-           (static_cast<int>(Layout) == ColMajor && m_dim.actualDim() == NumInputDims-1) ||
-           (static_cast<int>(Layout) == RowMajor && m_dim.actualDim() == 0);
-  }
-
-  Dimensions m_dimensions;
-  Index m_stride;
-  Index m_inputOffset;
-  Index m_inputStride;
-  TensorEvaluator<ArgType, Device> m_impl;
-  const internal::DimensionId<DimId> m_dim;
-  const Device EIGEN_DEVICE_REF m_device;
-};
-
-
-// Eval as lvalue
-template<DenseIndex DimId, typename ArgType, typename Device>
-struct TensorEvaluator<TensorChippingOp<DimId, ArgType>, Device>
-  : public TensorEvaluator<const TensorChippingOp<DimId, ArgType>, Device>
-{
-  typedef TensorEvaluator<const TensorChippingOp<DimId, ArgType>, Device> Base;
-  typedef TensorChippingOp<DimId, ArgType> XprType;
-  static const int NumInputDims = internal::array_size<typename TensorEvaluator<ArgType, Device>::Dimensions>::value;
-  static const int NumDims = NumInputDims-1;
-  typedef typename XprType::Index Index;
-  typedef DSizes<Index, NumDims> Dimensions;
-  typedef typename XprType::Scalar Scalar;
-  typedef typename XprType::CoeffReturnType CoeffReturnType;
-  typedef typename PacketType<CoeffReturnType, Device>::type PacketReturnType;
-  static const int PacketSize = PacketType<CoeffReturnType, Device>::size;
-
-  enum {
-    IsAligned     = false,
-    PacketAccess  = TensorEvaluator<ArgType, Device>::PacketAccess,
-    BlockAccess   = TensorEvaluator<ArgType, Device>::RawAccess,
-    Layout        = TensorEvaluator<ArgType, Device>::Layout,
-    RawAccess     = false
-  };
-
-  //===- Tensor block evaluation strategy (see TensorBlock.h) -------------===//
-  typedef internal::TensorBlockDescriptor<NumDims, Index> TensorBlockDesc;
-  //===--------------------------------------------------------------------===//
-
-  EIGEN_STRONG_INLINE TensorEvaluator(const XprType& op, const Device& device)
-    : Base(op, device)
-    { }
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE CoeffReturnType& coeffRef(Index index)
-  {
-    return this->m_impl.coeffRef(this->srcCoeff(index));
-  }
-
-  template <int StoreMode> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
-  void writePacket(Index index, const PacketReturnType& x)
-  {
-    EIGEN_STATIC_ASSERT((PacketSize > 1), YOU_MADE_A_PROGRAMMING_MISTAKE)
-
-    if (this->isInnerChipping()) {
-      // m_stride is equal to 1, so let's avoid the integer division.
-      eigen_assert(this->m_stride == 1);
-      EIGEN_ALIGN_MAX typename internal::remove_const<CoeffReturnType>::type values[PacketSize];
-      internal::pstore<CoeffReturnType, PacketReturnType>(values, x);
-      Index inputIndex = index * this->m_inputStride + this->m_inputOffset;
-      EIGEN_UNROLL_LOOP
-      for (int i = 0; i < PacketSize; ++i) {
-        this->m_impl.coeffRef(inputIndex) = values[i];
-        inputIndex += this->m_inputStride;
-      }
-    } else if (this->isOuterChipping()) {
-      // m_stride is always greater than index, so let's avoid the integer division.
-      eigen_assert(this->m_stride > index);
-      this->m_impl.template writePacket<StoreMode>(index + this->m_inputOffset, x);
-    } else {
-      const Index idx = index / this->m_stride;
-      const Index rem = index - idx * this->m_stride;
-      if (rem + PacketSize <= this->m_stride) {
-        const Index inputIndex = idx * this->m_inputStride + this->m_inputOffset + rem;
-        this->m_impl.template writePacket<StoreMode>(inputIndex, x);
-      } else {
-        // Cross stride boundary. Fallback to slow path.
-        EIGEN_ALIGN_MAX typename internal::remove_const<CoeffReturnType>::type values[PacketSize];
-        internal::pstore<CoeffReturnType, PacketReturnType>(values, x);
-        EIGEN_UNROLL_LOOP
-        for (int i = 0; i < PacketSize; ++i) {
-          this->coeffRef(index) = values[i];
-          ++index;
-        }
-      }
-    }
-  }
-
-  template <typename TensorBlock>
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void writeBlock(
-      const TensorBlockDesc& desc, const TensorBlock& block) {
-    assert(this->m_impl.data() != NULL);
-
-    const Index chip_dim = this->m_dim.actualDim();
-
-    DSizes<Index, NumInputDims> input_block_dims;
-    for (int i = 0; i < NumInputDims; ++i) {
-      input_block_dims[i] = i < chip_dim ? desc.dimension(i)
-                          : i > chip_dim ? desc.dimension(i - 1)
-                          : 1;
-    }
-
-    typedef TensorReshapingOp<const DSizes<Index, NumInputDims>,
-                              const typename TensorBlock::XprType>
-        TensorBlockExpr;
-
-    typedef internal::TensorBlockAssignment<Scalar, NumInputDims,
-                                            TensorBlockExpr, Index>
-        TensorBlockAssign;
-
-    TensorBlockAssign::Run(
-        TensorBlockAssign::target(
-            input_block_dims,
-            internal::strides<Layout>(this->m_impl.dimensions()),
-            this->m_impl.data(), this->srcCoeff(desc.offset())),
-        block.expr().reshape(input_block_dims));
-  }
-};
-
-
-} // end namespace Eigen
-
-#endif // EIGEN_CXX11_TENSOR_TENSOR_CHIPPING_H