sequenzo 0.1.17__cp311-cp311-macosx_10_9_universal2.whl → 0.1.19__cp311-cp311-macosx_10_9_universal2.whl

sequenzo/dissimilarity_measures/src/eigen/blas/level2_real_impl.h

@@ -1,306 +0,0 @@
-// This file is part of Eigen, a lightweight C++ template library
-// for linear algebra.
-//
-// Copyright (C) 2009-2010 Gael Guennebaud <gael.guennebaud@inria.fr>
-//
-// This Source Code Form is subject to the terms of the Mozilla
-// Public License v. 2.0. If a copy of the MPL was not distributed
-// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
-
-#include "common.h"
-
-// y = alpha*A*x + beta*y
-int EIGEN_BLAS_FUNC(symv) (const char *uplo, const int *n, const RealScalar *palpha, const RealScalar *pa, const int *lda,
-                           const RealScalar *px, const int *incx, const RealScalar *pbeta, RealScalar *py, const int *incy)
-{
-  typedef void (*functype)(int, const Scalar*, int, const Scalar*, Scalar*, Scalar);
-  static const functype func[2] = {
-    // array index: UP
-    (internal::selfadjoint_matrix_vector_product<Scalar,int,ColMajor,Upper,false,false>::run),
-    // array index: LO
-    (internal::selfadjoint_matrix_vector_product<Scalar,int,ColMajor,Lower,false,false>::run),
-  };
-
-  const Scalar* a = reinterpret_cast<const Scalar*>(pa);
-  const Scalar* x = reinterpret_cast<const Scalar*>(px);
-  Scalar* y = reinterpret_cast<Scalar*>(py);
-  Scalar alpha  = *reinterpret_cast<const Scalar*>(palpha);
-  Scalar beta   = *reinterpret_cast<const Scalar*>(pbeta);
-
-  // check arguments
-  int info = 0;
-  if(UPLO(*uplo)==INVALID)        info = 1;
-  else if(*n<0)                   info = 2;
-  else if(*lda<std::max(1,*n))    info = 5;
-  else if(*incx==0)               info = 7;
-  else if(*incy==0)               info = 10;
-  if(info)
-    return xerbla_(SCALAR_SUFFIX_UP"SYMV ",&info,6);
-
-  if(*n==0)
-    return 0;
-
-  const Scalar* actual_x = get_compact_vector(x,*n,*incx);
-  Scalar* actual_y = get_compact_vector(y,*n,*incy);
-
-  if(beta!=Scalar(1))
-  {
-    if(beta==Scalar(0)) make_vector(actual_y, *n).setZero();
-    else                make_vector(actual_y, *n) *= beta;
-  }
-
-  int code = UPLO(*uplo);
-  if(code>=2 || func[code]==0)
-    return 0;
-
-  func[code](*n, a, *lda, actual_x, actual_y, alpha);
-
-  if(actual_x!=x) delete[] actual_x;
-  if(actual_y!=y) delete[] copy_back(actual_y,y,*n,*incy);
-
-  return 1;
-}
-
-// C := alpha*x*x' + C
-int EIGEN_BLAS_FUNC(syr)(const char *uplo, const int *n, const RealScalar *palpha, const RealScalar *px, const int *incx, RealScalar *pc, const int *ldc)
-{
-
-  typedef void (*functype)(int, Scalar*, int, const Scalar*, const Scalar*, const Scalar&);
-  static const functype func[2] = {
-    // array index: UP
-    (selfadjoint_rank1_update<Scalar,int,ColMajor,Upper,false,Conj>::run),
-    // array index: LO
-    (selfadjoint_rank1_update<Scalar,int,ColMajor,Lower,false,Conj>::run),
-  };
-
-  const Scalar* x = reinterpret_cast<const Scalar*>(px);
-  Scalar* c = reinterpret_cast<Scalar*>(pc);
-  Scalar alpha = *reinterpret_cast<const Scalar*>(palpha);
-
-  int info = 0;
-  if(UPLO(*uplo)==INVALID)                                            info = 1;
-  else if(*n<0)                                                       info = 2;
-  else if(*incx==0)                                                   info = 5;
-  else if(*ldc<std::max(1,*n))                                        info = 7;
-  if(info)
-    return xerbla_(SCALAR_SUFFIX_UP"SYR  ",&info,6);
-
-  if(*n==0 || alpha==Scalar(0)) return 1;
-
-  // if the increment is not 1, let's copy it to a temporary vector to enable vectorization
-  const Scalar* x_cpy = get_compact_vector(x,*n,*incx);
-
-  int code = UPLO(*uplo);
-  if(code>=2 || func[code]==0)
-    return 0;
-
-  func[code](*n, c, *ldc, x_cpy, x_cpy, alpha);
-
-  if(x_cpy!=x)  delete[] x_cpy;
-
-  return 1;
-}
-
-// C := alpha*x*y' + alpha*y*x' + C
-int EIGEN_BLAS_FUNC(syr2)(const char *uplo, const int *n, const RealScalar *palpha, const RealScalar *px, const int *incx, const RealScalar *py, const int *incy, RealScalar *pc, const int *ldc)
-{
-  typedef void (*functype)(int, Scalar*, int, const Scalar*, const Scalar*, Scalar);
-  static const functype func[2] = {
-    // array index: UP
-    (internal::rank2_update_selector<Scalar,int,Upper>::run),
-    // array index: LO
-    (internal::rank2_update_selector<Scalar,int,Lower>::run),
-  };
-
-  const Scalar* x = reinterpret_cast<const Scalar*>(px);
-  const Scalar* y = reinterpret_cast<const Scalar*>(py);
-  Scalar* c = reinterpret_cast<Scalar*>(pc);
-  Scalar alpha = *reinterpret_cast<const Scalar*>(palpha);
-
-  int info = 0;
-  if(UPLO(*uplo)==INVALID)                                            info = 1;
-  else if(*n<0)                                                       info = 2;
-  else if(*incx==0)                                                   info = 5;
-  else if(*incy==0)                                                   info = 7;
-  else if(*ldc<std::max(1,*n))                                        info = 9;
-  if(info)
-    return xerbla_(SCALAR_SUFFIX_UP"SYR2 ",&info,6);
-
-  if(alpha==Scalar(0))
-    return 1;
-
-  const Scalar* x_cpy = get_compact_vector(x,*n,*incx);
-  const Scalar* y_cpy = get_compact_vector(y,*n,*incy);
-
-  int code = UPLO(*uplo);
-  if(code>=2 || func[code]==0)
-    return 0;
-
-  func[code](*n, c, *ldc, x_cpy, y_cpy, alpha);
-
-  if(x_cpy!=x)  delete[] x_cpy;
-  if(y_cpy!=y)  delete[] y_cpy;
-
-//   int code = UPLO(*uplo);
-//   if(code>=2 || func[code]==0)
-//     return 0;
-
-//   func[code](*n, a, *inca, b, *incb, c, *ldc, alpha);
-  return 1;
-}
-
-/**  DSBMV  performs the matrix-vector  operation
-  *
-  *     y := alpha*A*x + beta*y,
-  *
-  *  where alpha and beta are scalars, x and y are n element vectors and
-  *  A is an n by n symmetric band matrix, with k super-diagonals.
-  */
-// int EIGEN_BLAS_FUNC(sbmv)( char *uplo, int *n, int *k, RealScalar *alpha, RealScalar *a, int *lda,
-//                            RealScalar *x, int *incx, RealScalar *beta, RealScalar *y, int *incy)
-// {
-//   return 1;
-// }
-
-
-/**  DSPMV  performs the matrix-vector operation
-  *
-  *     y := alpha*A*x + beta*y,
-  *
-  *  where alpha and beta are scalars, x and y are n element vectors and
-  *  A is an n by n symmetric matrix, supplied in packed form.
-  *
-  */
-// int EIGEN_BLAS_FUNC(spmv)(char *uplo, int *n, RealScalar *alpha, RealScalar *ap, RealScalar *x, int *incx, RealScalar *beta, RealScalar *y, int *incy)
-// {
-//   return 1;
-// }
-
-/**  DSPR    performs the symmetric rank 1 operation
-  *
-  *     A := alpha*x*x' + A,
-  *
-  *  where alpha is a real scalar, x is an n element vector and A is an
-  *  n by n symmetric matrix, supplied in packed form.
-  */
-int EIGEN_BLAS_FUNC(spr)(char *uplo, int *n, Scalar *palpha, Scalar *px, int *incx, Scalar *pap)
-{
-  typedef void (*functype)(int, Scalar*, const Scalar*, Scalar);
-  static const functype func[2] = {
-    // array index: UP
-    (internal::selfadjoint_packed_rank1_update<Scalar,int,ColMajor,Upper,false,false>::run),
-    // array index: LO
-    (internal::selfadjoint_packed_rank1_update<Scalar,int,ColMajor,Lower,false,false>::run),
-  };
-
-  Scalar* x = reinterpret_cast<Scalar*>(px);
-  Scalar* ap = reinterpret_cast<Scalar*>(pap);
-  Scalar alpha = *reinterpret_cast<Scalar*>(palpha);
-
-  int info = 0;
-  if(UPLO(*uplo)==INVALID)                                            info = 1;
-  else if(*n<0)                                                       info = 2;
-  else if(*incx==0)                                                   info = 5;
-  if(info)
-    return xerbla_(SCALAR_SUFFIX_UP"SPR  ",&info,6);
-
-  if(alpha==Scalar(0))
-    return 1;
-
-  Scalar* x_cpy = get_compact_vector(x, *n, *incx);
-
-  int code = UPLO(*uplo);
-  if(code>=2 || func[code]==0)
-    return 0;
-
-  func[code](*n, ap, x_cpy, alpha);
-
-  if(x_cpy!=x)  delete[] x_cpy;
-
-  return 1;
-}
-
-/**  DSPR2  performs the symmetric rank 2 operation
-  *
-  *     A := alpha*x*y' + alpha*y*x' + A,
-  *
-  *  where alpha is a scalar, x and y are n element vectors and A is an
-  *  n by n symmetric matrix, supplied in packed form.
-  */
-int EIGEN_BLAS_FUNC(spr2)(char *uplo, int *n, RealScalar *palpha, RealScalar *px, int *incx, RealScalar *py, int *incy, RealScalar *pap)
-{
-  typedef void (*functype)(int, Scalar*, const Scalar*, const Scalar*, Scalar);
-  static const functype func[2] = {
-    // array index: UP
-    (internal::packed_rank2_update_selector<Scalar,int,Upper>::run),
-    // array index: LO
-    (internal::packed_rank2_update_selector<Scalar,int,Lower>::run),
-  };
-
-  Scalar* x = reinterpret_cast<Scalar*>(px);
-  Scalar* y = reinterpret_cast<Scalar*>(py);
-  Scalar* ap = reinterpret_cast<Scalar*>(pap);
-  Scalar alpha = *reinterpret_cast<Scalar*>(palpha);
-
-  int info = 0;
-  if(UPLO(*uplo)==INVALID)                                            info = 1;
-  else if(*n<0)                                                       info = 2;
-  else if(*incx==0)                                                   info = 5;
-  else if(*incy==0)                                                   info = 7;
-  if(info)
-    return xerbla_(SCALAR_SUFFIX_UP"SPR2 ",&info,6);
-
-  if(alpha==Scalar(0))
-    return 1;
-
-  Scalar* x_cpy = get_compact_vector(x, *n, *incx);
-  Scalar* y_cpy = get_compact_vector(y, *n, *incy);
-
-  int code = UPLO(*uplo);
-  if(code>=2 || func[code]==0)
-    return 0;
-
-  func[code](*n, ap, x_cpy, y_cpy, alpha);
-
-  if(x_cpy!=x)  delete[] x_cpy;
-  if(y_cpy!=y)  delete[] y_cpy;
-
-  return 1;
-}
-
-/**  DGER   performs the rank 1 operation
-  *
-  *     A := alpha*x*y' + A,
-  *
-  *  where alpha is a scalar, x is an m element vector, y is an n element
-  *  vector and A is an m by n matrix.
-  */
-int EIGEN_BLAS_FUNC(ger)(int *m, int *n, Scalar *palpha, Scalar *px, int *incx, Scalar *py, int *incy, Scalar *pa, int *lda)
-{
-  Scalar* x = reinterpret_cast<Scalar*>(px);
-  Scalar* y = reinterpret_cast<Scalar*>(py);
-  Scalar* a = reinterpret_cast<Scalar*>(pa);
-  Scalar alpha = *reinterpret_cast<Scalar*>(palpha);
-
-  int info = 0;
-       if(*m<0)                                                       info = 1;
-  else if(*n<0)                                                       info = 2;
-  else if(*incx==0)                                                   info = 5;
-  else if(*incy==0)                                                   info = 7;
-  else if(*lda<std::max(1,*m))                                        info = 9;
-  if(info)
-    return xerbla_(SCALAR_SUFFIX_UP"GER  ",&info,6);
-
-  if(alpha==Scalar(0))
-    return 1;
-
-  Scalar* x_cpy = get_compact_vector(x,*m,*incx);
-  Scalar* y_cpy = get_compact_vector(y,*n,*incy);
-
-  internal::general_rank1_update<Scalar,int,ColMajor,false,false>::run(*m, *n, a, *lda, x_cpy, y_cpy, alpha);
-
-  if(x_cpy!=x)  delete[] x_cpy;
-  if(y_cpy!=y)  delete[] y_cpy;
-
-  return 1;
-}