scikit-learn-intelex 2024.4.0__py312-none-win_amd64.whl → 2025.10.0__py312-none-win_amd64.whl

scikit_learn_intelex-2024.4.0.data/data/Lib/site-packages/sklearnex/decomposition/pca.py

@@ -1,335 +0,0 @@
-# ===============================================================================
-# Copyright 2021 Intel Corporation
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-#     http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-# ===============================================================================
-
-import logging
-
-from daal4py.sklearn._utils import daal_check_version
-
-if daal_check_version((2024, "P", 100)):
-    import numbers
-    from math import sqrt
-
-    import numpy as np
-    from scipy.sparse import issparse
-    from sklearn.utils.validation import check_is_fitted
-
-    from daal4py.sklearn._n_jobs_support import control_n_jobs
-    from daal4py.sklearn._utils import sklearn_check_version
-
-    from .._device_offload import dispatch, wrap_output_data
-    from .._utils import PatchingConditionsChain
-
-    if sklearn_check_version("1.1") and not sklearn_check_version("1.2"):
-        from sklearn.utils import check_scalar
-
-    from sklearn.decomposition import PCA as sklearn_PCA
-
-    from onedal.decomposition import PCA as onedal_PCA
-
-    @control_n_jobs(decorated_methods=["fit", "transform", "fit_transform"])
-    class PCA(sklearn_PCA):
-        __doc__ = sklearn_PCA.__doc__
-
-        if sklearn_check_version("1.2"):
-            _parameter_constraints: dict = {**sklearn_PCA._parameter_constraints}
-
-        if sklearn_check_version("1.1"):
-
-            def __init__(
-                self,
-                n_components=None,
-                *,
-                copy=True,
-                whiten=False,
-                svd_solver="auto",
-                tol=0.0,
-                iterated_power="auto",
-                n_oversamples=10,
-                power_iteration_normalizer="auto",
-                random_state=None,
-            ):
-                self.n_components = n_components
-                self.copy = copy
-                self.whiten = whiten
-                self.svd_solver = svd_solver
-                self.tol = tol
-                self.iterated_power = iterated_power
-                self.n_oversamples = n_oversamples
-                self.power_iteration_normalizer = power_iteration_normalizer
-                self.random_state = random_state
-
-        else:
-
-            def __init__(
-                self,
-                n_components=None,
-                copy=True,
-                whiten=False,
-                svd_solver="auto",
-                tol=0.0,
-                iterated_power="auto",
-                random_state=None,
-            ):
-                self.n_components = n_components
-                self.copy = copy
-                self.whiten = whiten
-                self.svd_solver = svd_solver
-                self.tol = tol
-                self.iterated_power = iterated_power
-                self.random_state = random_state
-
-        def fit(self, X, y=None):
-            self._fit(X)
-            return self
-
-        @wrap_output_data
-        def _fit(self, X):
-            if sklearn_check_version("1.2"):
-                self._validate_params()
-            elif sklearn_check_version("1.1"):
-                check_scalar(
-                    self.n_oversamples,
-                    "n_oversamples",
-                    min_val=1,
-                    target_type=numbers.Integral,
-                )
-
-            U, S, Vt = dispatch(
-                self,
-                "fit",
-                {
-                    "onedal": self.__class__._onedal_fit,
-                    "sklearn": sklearn_PCA._fit,
-                },
-                X,
-            )
-            return U, S, Vt
-
-        def _onedal_fit(self, X, queue=None):
-            X = self._validate_data(
-                X,
-                dtype=[np.float64, np.float32],
-                ensure_2d=True,
-                copy=self.copy,
-            )
-
-            onedal_params = {
-                "n_components": self.n_components,
-                "is_deterministic": True,
-                "method": "cov",
-                "whiten": self.whiten,
-            }
-            self._onedal_estimator = onedal_PCA(**onedal_params)
-            self._onedal_estimator.fit(X, queue=queue)
-            self._save_attributes()
-
-            U = None
-            S = self.singular_values_
-            Vt = self.components_
-
-            return U, S, Vt
-
-        @wrap_output_data
-        def transform(self, X):
-            return dispatch(
-                self,
-                "transform",
-                {
-                    "onedal": self.__class__._onedal_transform,
-                    "sklearn": sklearn_PCA.transform,
-                },
-                X,
-            )
-
-        def _onedal_transform(self, X, queue=None):
-            check_is_fitted(self)
-            X = self._validate_data(
-                X,
-                dtype=[np.float64, np.float32],
-                reset=False,
-            )
-            self._validate_n_features_in_after_fitting(X)
-            if sklearn_check_version("1.0"):
-                self._check_feature_names(X, reset=False)
-
-            return self._onedal_estimator.predict(X, queue=queue)
-
-        def fit_transform(self, X, y=None):
-            U, S, Vt = self._fit(X)
-            if U is None:
-                # oneDAL PCA was fit
-                return self.transform(X)
-            else:
-                # Scikit-learn PCA was fit
-                U = U[:, : self.n_components_]
-
-                if self.whiten:
-                    U *= sqrt(X.shape[0] - 1)
-                else:
-                    U *= S[: self.n_components_]
-
-                return U
-
-        def _onedal_supported(self, method_name, X):
-            class_name = self.__class__.__name__
-            patching_status = PatchingConditionsChain(
-                f"sklearn.decomposition.{class_name}.{method_name}"
-            )
-
-            if method_name == "fit":
-                shape_tuple, _is_shape_compatible = self._get_shape_compatibility(X)
-                patching_status.and_conditions(
-                    [
-                        (
-                            _is_shape_compatible,
-                            "Data shape is not compatible.",
-                        ),
-                        (
-                            self._is_solver_compatible_with_onedal(shape_tuple),
-                            f"Only 'full' svd solver is supported.",
-                        ),
-                        (not issparse(X), "oneDAL PCA does not support sparse data"),
-                    ]
-                )
-                return patching_status
-
-            if method_name == "transform":
-                patching_status.and_conditions(
-                    [
-                        (
-                            hasattr(self, "_onedal_estimator"),
-                            "oneDAL model was not trained",
-                        ),
-                    ]
-                )
-                return patching_status
-
-            raise RuntimeError(
-                f"Unknown method {method_name} in {self.__class__.__name__}"
-            )
-
-        def _onedal_cpu_supported(self, method_name, *data):
-            return self._onedal_supported(method_name, *data)
-
-        def _onedal_gpu_supported(self, method_name, *data):
-            return self._onedal_supported(method_name, *data)
-
-        def _get_shape_compatibility(self, X):
-            _is_shape_compatible = False
-            _empty_shape = (0, 0)
-            if hasattr(X, "shape"):
-                shape_tuple = X.shape
-                if len(shape_tuple) == 1:
-                    shape_tuple = (1, shape_tuple[0])
-            elif isinstance(X, list):
-                if np.ndim(X) == 1:
-                    shape_tuple = (1, len(X))
-                elif np.ndim(X) == 2:
-                    shape_tuple = (len(X), len(X[0]))
-            else:
-                return _empty_shape, _is_shape_compatible
-
-            if shape_tuple[0] > 0 and shape_tuple[1] > 0 and len(shape_tuple) == 2:
-                _is_shape_compatible = shape_tuple[1] / shape_tuple[0] < 2
-
-            return shape_tuple, _is_shape_compatible
-
-        def _is_solver_compatible_with_onedal(self, shape_tuple):
-            self._fit_svd_solver = self.svd_solver
-            n_sf_min = min(shape_tuple)
-            n_components = n_sf_min if self.n_components is None else self.n_components
-
-            if self._fit_svd_solver == "auto":
-                if sklearn_check_version("1.1"):
-                    if max(shape_tuple) <= 500 or n_components == "mle":
-                        self._fit_svd_solver = "full"
-                    elif 1 <= n_components < 0.8 * n_sf_min:
-                        self._fit_svd_solver = "randomized"
-                    else:
-                        self._fit_svd_solver = "full"
-                else:
-                    if n_components == "mle":
-                        self._fit_svd_solver = "full"
-                    else:
-                        # check if sklearnex is faster than randomized sklearn
-                        # Refer to daal4py
-                        regression_coefs = np.array(
-                            [
-                                [
-                                    9.779873e-11,
-                                    shape_tuple[0] * shape_tuple[1] * n_components,
-                                ],
-                                [
-                                    -1.122062e-11,
-                                    shape_tuple[0] * shape_tuple[1] * shape_tuple[1],
-                                ],
-                                [1.127905e-09, shape_tuple[0] ** 2],
-                            ]
-                        )
-                        if (
-                            n_components >= 1
-                            and np.dot(regression_coefs[:, 0], regression_coefs[:, 1])
-                            <= 0
-                        ):
-                            self._fit_svd_solver = "randomized"
-                        else:
-                            self._fit_svd_solver = "full"
-
-            if self._fit_svd_solver == "full":
-                return True
-            else:
-                return False
-
-        def _save_attributes(self):
-            self.n_samples_ = self._onedal_estimator.n_samples_
-            if sklearn_check_version("1.2"):
-                self.n_features_in_ = self._onedal_estimator.n_features_
-            else:
-                self.n_features_ = self._onedal_estimator.n_features_
-                self.n_features_in_ = self._onedal_estimator.n_features_
-            self.n_components_ = self._onedal_estimator.n_components_
-            self.components_ = self._onedal_estimator.components_
-            self.mean_ = self._onedal_estimator.mean_
-            self.singular_values_ = self._onedal_estimator.singular_values_
-            self.explained_variance_ = self._onedal_estimator.explained_variance_.ravel()
-            self.explained_variance_ratio_ = (
-                self._onedal_estimator.explained_variance_ratio_
-            )
-            self.noise_variance_ = self._onedal_estimator.noise_variance_
-
-        def _validate_n_features_in_after_fitting(self, X):
-            if sklearn_check_version("1.2"):
-                expected_n_features = self.n_features_in_
-            else:
-                expected_n_features = self.n_features_
-            if X.shape[1] != expected_n_features:
-                raise ValueError(
-                    (
-                        f"X has {X.shape[1]} features, "
-                        f"but PCA is expecting {expected_n_features} features as input"
-                    )
-                )
-
-        fit.__doc__ = sklearn_PCA.fit.__doc__
-        transform.__doc__ = sklearn_PCA.transform.__doc__
-        fit_transform.__doc__ = sklearn_PCA.fit_transform.__doc__
-
-else:
-    from daal4py.sklearn.decomposition import PCA
-
-    logging.warning(
-        "Sklearnex PCA requires oneDAL version >= 2024.1.0 but it was not found"
-    )

scikit_learn_intelex-2024.4.0.data/data/Lib/site-packages/sklearnex/decomposition/tests/test_pca.py

@@ -1,56 +0,0 @@
-# ===============================================================================
-# Copyright 2023 Intel Corporation
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-#     http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-# ===============================================================================
-
-import numpy as np
-import pytest
-from numpy.testing import assert_allclose
-
-from daal4py.sklearn._utils import daal_check_version
-from onedal.tests.utils._dataframes_support import (
-    _as_numpy,
-    _convert_to_dataframe,
-    get_dataframes_and_queues,
-)
-
-
-@pytest.mark.parametrize("dataframe,queue", get_dataframes_and_queues())
-def test_sklearnex_import(dataframe, queue):
-    from sklearnex.decomposition import PCA
-
-    X = [[-1, -1], [-2, -1], [-3, -2], [1, 1], [2, 1], [3, 2]]
-    X = _convert_to_dataframe(X, sycl_queue=queue, target_df=dataframe)
-    X_transformed_expected = [
-        [-1.38340578, -0.2935787],
-        [-2.22189802, 0.25133484],
-        [-3.6053038, -0.04224385],
-        [1.38340578, 0.2935787],
-        [2.22189802, -0.25133484],
-        [3.6053038, 0.04224385],
-    ]
-
-    pca = PCA(n_components=2, svd_solver="full")
-    pca.fit(X)
-    X_transformed = pca.transform(X)
-    X_fit_transformed = PCA(n_components=2, svd_solver="full").fit_transform(X)
-
-    if daal_check_version((2024, "P", 100)):
-        assert "sklearnex" in pca.__module__
-        assert hasattr(pca, "_onedal_estimator")
-    else:
-        assert "daal4py" in pca.__module__
-    assert_allclose([6.30061232, 0.54980396], _as_numpy(pca.singular_values_))
-    assert_allclose(X_transformed_expected, _as_numpy(X_transformed))
-    assert_allclose(X_transformed_expected, _as_numpy(X_fit_transformed))

scikit_learn_intelex-2024.4.0.data/data/Lib/site-packages/sklearnex/ensemble/tests/test_forest.py

@@ -1,113 +0,0 @@
-# ===============================================================================
-# Copyright 2023 Intel Corporation
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-#     http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-# ===============================================================================
-
-import pytest
-from numpy.testing import assert_allclose
-from sklearn.datasets import make_classification, make_regression
-
-from daal4py.sklearn._utils import daal_check_version
-from onedal.tests.utils._dataframes_support import (
-    _as_numpy,
-    _convert_to_dataframe,
-    get_dataframes_and_queues,
-)
-
-
-@pytest.mark.parametrize("dataframe,queue", get_dataframes_and_queues())
-def test_sklearnex_import_rf_classifier(dataframe, queue):
-    from sklearnex.ensemble import RandomForestClassifier
-
-    X, y = make_classification(
-        n_samples=1000,
-        n_features=4,
-        n_informative=2,
-        n_redundant=0,
-        random_state=0,
-        shuffle=False,
-    )
-    X = _convert_to_dataframe(X, sycl_queue=queue, target_df=dataframe)
-    y = _convert_to_dataframe(y, sycl_queue=queue, target_df=dataframe)
-    rf = RandomForestClassifier(max_depth=2, random_state=0).fit(X, y)
-    assert "sklearnex" in rf.__module__
-    assert_allclose([1], _as_numpy(rf.predict([[0, 0, 0, 0]])))
-
-
-@pytest.mark.parametrize("dataframe,queue", get_dataframes_and_queues())
-def test_sklearnex_import_rf_regression(dataframe, queue):
-    from sklearnex.ensemble import RandomForestRegressor
-
-    X, y = make_regression(n_features=4, n_informative=2, random_state=0, shuffle=False)
-    X = _convert_to_dataframe(X, sycl_queue=queue, target_df=dataframe)
-    y = _convert_to_dataframe(y, sycl_queue=queue, target_df=dataframe)
-    rf = RandomForestRegressor(max_depth=2, random_state=0).fit(X, y)
-    assert "sklearnex" in rf.__module__
-    pred = _as_numpy(rf.predict([[0, 0, 0, 0]]))
-
-    if queue is not None and queue.sycl_device.is_gpu:
-        assert_allclose([-0.011208], pred, atol=1e-2)
-    else:
-        if daal_check_version((2024, "P", 0)):
-            assert_allclose([-6.971], pred, atol=1e-2)
-        else:
-            assert_allclose([-6.839], pred, atol=1e-2)
-
-
-@pytest.mark.parametrize("dataframe,queue", get_dataframes_and_queues())
-def test_sklearnex_import_et_classifier(dataframe, queue):
-    from sklearnex.ensemble import ExtraTreesClassifier
-
-    X, y = make_classification(
-        n_samples=1000,
-        n_features=4,
-        n_informative=2,
-        n_redundant=0,
-        random_state=0,
-        shuffle=False,
-    )
-    X = _convert_to_dataframe(X, sycl_queue=queue, target_df=dataframe)
-    y = _convert_to_dataframe(y, sycl_queue=queue, target_df=dataframe)
-    # For the 2023.2 release, random_state is not supported
-    # defaults to seed=777, although it is set to 0
-    rf = ExtraTreesClassifier(max_depth=2, random_state=0).fit(X, y)
-    assert "sklearnex" in rf.__module__
-    assert_allclose([1], _as_numpy(rf.predict([[0, 0, 0, 0]])))
-
-
-@pytest.mark.parametrize("dataframe,queue", get_dataframes_and_queues())
-def test_sklearnex_import_et_regression(dataframe, queue):
-    from sklearnex.ensemble import ExtraTreesRegressor
-
-    X, y = make_regression(n_features=1, random_state=0, shuffle=False)
-    X = _convert_to_dataframe(X, sycl_queue=queue, target_df=dataframe)
-    y = _convert_to_dataframe(y, sycl_queue=queue, target_df=dataframe)
-    # For the 2023.2 release, random_state is not supported
-    # defaults to seed=777, although it is set to 0
-    rf = ExtraTreesRegressor(random_state=0).fit(X, y)
-    assert "sklearnex" in rf.__module__
-    pred = _as_numpy(
-        rf.predict(
-            [
-                [
-                    0,
-                ]
-            ]
-        )
-    )
-
-    if queue is not None and queue.sycl_device.is_gpu:
-        assert_allclose([1.909769], pred, atol=1e-2)
-    else:
-        assert_allclose([0.445], pred, atol=1e-2)