scikit-learn-intelex 2023.2.1__py39-none-win_amd64.whl → 2024.0.1__py39-none-win_amd64.whl

scikit_learn_intelex-2023.2.1.data/data/Lib/site-packages/sklearnex/tests/test_run_to_run_stability_tests.py

@@ -1,383 +0,0 @@
-#===============================================================================
-# Copyright 2020 Intel Corporation
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-#     http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#===============================================================================
-
-import daal4py as d4p
-import numpy as np
-import pytest
-import random
-
-from sklearnex import patch_sklearn
-patch_sklearn()
-
-from sklearn.ensemble import RandomForestClassifier, RandomForestRegressor
-from sklearn.linear_model import LogisticRegression, LogisticRegressionCV
-from sklearn.neighbors import (KNeighborsClassifier, KNeighborsRegressor,
-                               NearestNeighbors, LocalOutlierFactor)
-from sklearn.linear_model import LinearRegression, Ridge, ElasticNet, Lasso
-from sklearn.cluster import KMeans, DBSCAN
-from sklearn.decomposition import PCA
-from sklearn.svm import SVC, NuSVC, SVR, NuSVR
-from sklearn.manifold import TSNE
-from sklearn.model_selection import train_test_split
-
-from sklearn.datasets import (make_classification, make_regression,
-                              load_breast_cancer, load_diabetes, load_iris)
-from sklearn.metrics import pairwise_distances, roc_auc_score
-from scipy import sparse
-from daal4py.sklearn._utils import daal_check_version
-
-# to reproduce errors even in CI
-d4p.daalinit(nthreads=100)
-
-
-def get_class_name(x):
-    return x.__class__.__name__
-
-
-def method_processing(X, clf, methods):
-    res = []
-    name = []
-    for i in methods:
-        if i == 'predict':
-            res.append(clf.predict(X))
-            name.append(get_class_name(clf) + '.predict(X)')
-        elif i == 'predict_proba':
-            res.append(clf.predict_proba(X))
-            name.append(get_class_name(clf) + '.predict_proba(X)')
-        elif i == 'decision_function':
-            res.append(clf.decision_function(X))
-            name.append(get_class_name(clf) + '.decision_function(X)')
-        elif i == 'kneighbors':
-            dist, idx = clf.kneighbors(X)
-            res.append(dist)
-            name.append('dist')
-            res.append(idx)
-            name.append('idx')
-        elif i == 'fit_predict':
-            predict = clf.fit_predict(X)
-            res.append(predict)
-            name.append(get_class_name(clf) + '.fit_predict')
-        elif i == 'fit_transform':
-            res.append(clf.fit_transform(X))
-            name.append(get_class_name(clf) + '.fit_transform')
-        elif i == 'transform':
-            res.append(clf.transform(X))
-            name.append(get_class_name(clf) + '.transform(X)')
-        elif i == 'get_covariance':
-            res.append(clf.get_covariance())
-            name.append(get_class_name(clf) + '.get_covariance()')
-        elif i == 'get_precision':
-            res.append(clf.get_precision())
-            name.append(get_class_name(clf) + '.get_precision()')
-        elif i == 'score_samples':
-            res.append(clf.score_samples(X))
-            name.append(get_class_name(clf) + '.score_samples(X)')
-    return res, name
-
-
-def func(X, Y, clf, methods):
-    clf.fit(X, Y)
-    res, name = method_processing(X, clf, methods)
-
-    for i in clf.__dict__.keys():
-        ans = getattr(clf, i)
-        if isinstance(ans, (bool, float, int, np.ndarray, np.float64)):
-            if isinstance(ans, np.ndarray) and None in ans:
-                continue
-            res.append(ans)
-            name.append(get_class_name(clf) + '.' + i)
-    return res, name
-
-
-def _run_test(model, methods, dataset):
-    datasets = []
-    if dataset in ['blobs', 'classifier', 'sparse']:
-        X1, y1 = load_iris(return_X_y=True)
-        if dataset == 'sparse':
-            X1 = sparse.csr_matrix(X1)
-        datasets.append((X1, y1))
-        X2, y2 = load_breast_cancer(return_X_y=True)
-        if dataset == 'sparse':
-            X2 = sparse.csr_matrix(X2)
-        datasets.append((X2, y2))
-    elif dataset == 'regression':
-        X1, y1 = make_regression(n_samples=500, n_features=10,
-                                 noise=64.0, random_state=42)
-        datasets.append((X1, y1))
-        X2, y2 = load_diabetes(return_X_y=True)
-        datasets.append((X2, y2))
-    else:
-        raise ValueError('Unknown dataset type')
-
-    for X, y in datasets:
-        baseline, name = func(X, y, model, methods)
-        for i in range(10):
-            res, _ = func(X, y, model, methods)
-
-            for a, b, n in zip(res, baseline, name):
-                np.testing.assert_allclose(a, b, rtol=0.0, atol=0.0,
-                                           err_msg=str(n + " is incorrect"))
-
-
-MODELS_INFO = [
-    {
-        'model': KNeighborsClassifier(n_neighbors=10, algorithm='brute',
-                                      weights="uniform"),
-        'methods': ['predict', 'predict_proba', 'kneighbors'],
-        'dataset': 'classifier',
-    },
-    {
-        'model': KNeighborsClassifier(n_neighbors=10, algorithm='brute',
-                                      weights="distance"),
-        'methods': ['predict', 'predict_proba', 'kneighbors'],
-        'dataset': 'classifier',
-    },
-    {
-        'model': KNeighborsClassifier(n_neighbors=10, algorithm='kd_tree',
-                                      weights="uniform"),
-        'methods': ['predict', 'predict_proba', 'kneighbors'],
-        'dataset': 'classifier',
-    },
-    {
-        'model': KNeighborsClassifier(n_neighbors=10, algorithm='kd_tree',
-                                      weights="distance"),
-        'methods': ['predict', 'predict_proba', 'kneighbors'],
-        'dataset': 'classifier',
-    },
-    {
-        'model': KNeighborsRegressor(n_neighbors=10, algorithm='kd_tree',
-                                     weights="distance"),
-        'methods': ['predict', 'kneighbors'],
-        'dataset': 'regression',
-    },
-    {
-        'model': KNeighborsRegressor(n_neighbors=10, algorithm='kd_tree',
-                                     weights="uniform"),
-        'methods': ['predict', 'kneighbors'],
-        'dataset': 'regression',
-    },
-    {
-        'model': KNeighborsRegressor(n_neighbors=10, algorithm='brute',
-                                     weights="distance"),
-        'methods': ['predict', 'kneighbors'],
-        'dataset': 'regression',
-    },
-    {
-        'model': KNeighborsRegressor(n_neighbors=10, algorithm='brute',
-                                     weights="uniform"),
-        'methods': ['predict', 'kneighbors'],
-        'dataset': 'regression',
-    },
-    {
-        'model': NearestNeighbors(n_neighbors=10, algorithm='brute'),
-        'methods': ['kneighbors'],
-        'dataset': 'blobs',
-    },
-    {
-        'model': NearestNeighbors(n_neighbors=10, algorithm='kd_tree'),
-        'methods': ['kneighbors'],
-        'dataset': 'blobs',
-    },
-    {
-        'model': LocalOutlierFactor(n_neighbors=10, novelty=False),
-        'methods': ['fit_predict'],
-        'dataset': 'blobs',
-    },
-    {
-        'model': LocalOutlierFactor(n_neighbors=10, novelty=True),
-        'methods': ['predict'],
-        'dataset': 'blobs',
-    },
-    {
-        'model': DBSCAN(algorithm="brute", n_jobs=-1),
-        'methods': [],
-        'dataset': 'blobs',
-    },
-    {
-        'model': SVC(kernel='rbf'),
-        'methods': ['predict', 'decision_function'],
-        'dataset': 'classifier',
-    },
-    {
-        'model': SVC(kernel='rbf'),
-        'methods': ['predict', 'decision_function'],
-        'dataset': 'sparse',
-    },
-    {
-        'model': NuSVC(kernel='rbf'),
-        'methods': ['predict', 'decision_function'],
-        'dataset': 'classifier',
-    },
-    {
-        'model': SVR(kernel='rbf'),
-        'methods': ['predict'],
-        'dataset': 'regression',
-    },
-    {
-        'model': NuSVR(kernel='rbf'),
-        'methods': ['predict'],
-        'dataset': 'regression',
-    },
-    {
-        'model': TSNE(random_state=0),
-        'methods': ['fit_transform'],
-        'dataset': 'classifier',
-    },
-    {
-        'model': KMeans(random_state=0, init="k-means++"),
-        'methods': ['predict'],
-        'dataset': 'blobs',
-    },
-    {
-        'model': KMeans(random_state=0, init="random"),
-        'methods': ['predict'],
-        'dataset': 'blobs',
-    },
-    {
-        'model': KMeans(random_state=0, init="k-means++"),
-        'methods': ['predict'],
-        'dataset': 'sparse',
-    },
-    {
-        'model': KMeans(random_state=0, init="random"),
-        'methods': ['predict'],
-        'dataset': 'sparse',
-    },
-    {
-        'model': ElasticNet(random_state=0),
-        'methods': ['predict'],
-        'dataset': 'regression',
-    },
-    {
-        'model': Lasso(random_state=0),
-        'methods': ['predict'],
-        'dataset': 'regression',
-    },
-    {
-        'model': PCA(n_components=0.5, svd_solver="full", random_state=0),
-        'methods': ['transform', 'get_covariance', 'get_precision', 'score_samples'],
-        'dataset': 'classifier',
-    },
-    {
-        'model': RandomForestClassifier(random_state=0, oob_score=True,
-                                        max_samples=0.5, max_features='sqrt'),
-        'methods': ['predict', 'predict_proba'],
-        'dataset': 'classifier',
-    },
-    {
-        'model': LogisticRegression(random_state=0, solver="newton-cg", max_iter=1000),
-        'methods': ['predict', 'predict_proba'],
-        'dataset': 'classifier',
-    },
-    {
-        'model': LogisticRegression(random_state=0, solver="lbfgs", max_iter=1000),
-        'methods': ['predict', 'predict_proba'],
-        'dataset': 'classifier',
-    },
-    {
-        'model': LogisticRegressionCV(random_state=0, solver="newton-cg",
-                                      n_jobs=-1, max_iter=1000),
-        'methods': ['predict', 'predict_proba'],
-        'dataset': 'classifier',
-    },
-    {
-        'model': LogisticRegressionCV(random_state=0, solver="lbfgs",
-                                      n_jobs=-1, max_iter=1000),
-        'methods': ['predict', 'predict_proba'],
-        'dataset': 'classifier',
-    },
-    {
-        'model': RandomForestRegressor(random_state=0, oob_score=True,
-                                       max_samples=0.5, max_features='sqrt'),
-        'methods': ['predict'],
-        'dataset': 'regression',
-    },
-    {
-        'model': LinearRegression(),
-        'methods': ['predict'],
-        'dataset': 'regression',
-    },
-    {
-        'model': Ridge(random_state=0),
-        'methods': ['predict'],
-        'dataset': 'regression',
-    },
-]
-
-TO_SKIP = [
-    'TSNE',  # Absolute diff is 1e-10, potential problem in KNN,
-             # will be fixed for next release. (UPD. KNN is fixed but there is a problem
-             # with stability of stock sklearn. It is already stable in master, so, we
-             # need to wait for the next sklearn release)
-    'LogisticRegression',  # Absolute diff is 1e-8, will be fixed for next release
-    'LogisticRegressionCV',  # Absolute diff is 1e-10, will be fixed for next release
-    'RandomForestRegressor',  # Absolute diff is 1e-14 in OOB score,
-                              # will be fixed for next release
-]
-
-
-@pytest.mark.parametrize('model_head', MODELS_INFO)
-def test_models(model_head):
-    stable_algos = []
-    if get_class_name(model_head['model']) in stable_algos \
-            and daal_check_version((2021, 'P', 300)):
-        try:
-            TO_SKIP.remove(get_class_name(model_head['model']))
-        except ValueError:
-            pass
-    if get_class_name(model_head['model']) in TO_SKIP:
-        pytest.skip("Unstable", allow_module_level=False)
-    _run_test(model_head['model'], model_head['methods'], model_head['dataset'])
-
-
-@pytest.mark.parametrize('features', range(5, 10))
-def test_train_test_split(features):
-    X, y = make_classification(n_samples=4000, n_features=features,
-                               n_informative=features, n_redundant=0,
-                               n_clusters_per_class=8, random_state=0)
-    baseline_X_train, baseline_X_test, baseline_y_train, baseline_y_test = \
-        train_test_split(X, y, test_size=0.33, random_state=0)
-    baseline = [baseline_X_train, baseline_X_test, baseline_y_train, baseline_y_test]
-    for _ in range(10):
-        X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.33,
-                                                            random_state=0)
-        res = [X_train, X_test, y_train, y_test]
-        for a, b in zip(res, baseline):
-            np.testing.assert_allclose(a, b, rtol=0.0, atol=0.0,
-                                       err_msg=str("train_test_split is incorrect"))
-
-
-@pytest.mark.parametrize('metric', ['cosine', 'correlation'])
-def test_pairwise_distances(metric):
-    X = np.random.rand(1000)
-    X = np.array(X, dtype=np.float64)
-    baseline = pairwise_distances(X.reshape(1, -1), metric=metric)
-    for _ in range(5):
-        res = pairwise_distances(X.reshape(1, -1), metric=metric)
-        for a, b in zip(res, baseline):
-            np.testing.assert_allclose(a, b, rtol=0.0, atol=0.0,
-                                       err_msg=str("pairwise_distances is incorrect"))
-
-
-@pytest.mark.parametrize('array_size', [100, 1000, 10000])
-def test_roc_auc(array_size):
-    a = [random.randint(0, 1) for i in range(array_size)]
-    b = [random.randint(0, 1) for i in range(array_size)]
-    baseline = roc_auc_score(a, b)
-    for _ in range(5):
-        res = roc_auc_score(a, b)
-        np.testing.assert_allclose(baseline, res, rtol=0.0, atol=0.0,
-                                   err_msg=str("roc_auc is incorrect"))

scikit_learn_intelex-2023.2.1.dist-info/RECORD

@@ -1,95 +0,0 @@
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