rapidtide 2.9.6__py3-none-any.whl → 3.1.3__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (405) hide show
  1. cloud/gmscalc-HCPYA +1 -1
  2. cloud/mount-and-run +2 -0
  3. cloud/rapidtide-HCPYA +3 -3
  4. rapidtide/Colortables.py +538 -38
  5. rapidtide/OrthoImageItem.py +1094 -51
  6. rapidtide/RapidtideDataset.py +1709 -114
  7. rapidtide/__init__.py +0 -8
  8. rapidtide/_version.py +4 -4
  9. rapidtide/calccoherence.py +242 -97
  10. rapidtide/calcnullsimfunc.py +240 -140
  11. rapidtide/calcsimfunc.py +314 -129
  12. rapidtide/correlate.py +1211 -389
  13. rapidtide/data/examples/src/testLD +56 -0
  14. rapidtide/data/examples/src/test_findmaxlag.py +2 -2
  15. rapidtide/data/examples/src/test_mlregressallt.py +32 -17
  16. rapidtide/data/examples/src/testalign +1 -1
  17. rapidtide/data/examples/src/testatlasaverage +35 -7
  18. rapidtide/data/examples/src/testboth +21 -0
  19. rapidtide/data/examples/src/testcifti +11 -0
  20. rapidtide/data/examples/src/testdelayvar +13 -0
  21. rapidtide/data/examples/src/testdlfilt +25 -0
  22. rapidtide/data/examples/src/testfft +35 -0
  23. rapidtide/data/examples/src/testfileorfloat +37 -0
  24. rapidtide/data/examples/src/testfmri +92 -42
  25. rapidtide/data/examples/src/testfuncs +3 -3
  26. rapidtide/data/examples/src/testglmfilt +8 -6
  27. rapidtide/data/examples/src/testhappy +84 -51
  28. rapidtide/data/examples/src/testinitdelay +19 -0
  29. rapidtide/data/examples/src/testmodels +33 -0
  30. rapidtide/data/examples/src/testnewrefine +26 -0
  31. rapidtide/data/examples/src/testnoiseamp +2 -2
  32. rapidtide/data/examples/src/testppgproc +17 -0
  33. rapidtide/data/examples/src/testrefineonly +22 -0
  34. rapidtide/data/examples/src/testretro +26 -13
  35. rapidtide/data/examples/src/testretrolagtcs +16 -0
  36. rapidtide/data/examples/src/testrolloff +11 -0
  37. rapidtide/data/examples/src/testsimdata +45 -28
  38. rapidtide/data/models/model_cnn_pytorch/loss.png +0 -0
  39. rapidtide/data/models/model_cnn_pytorch/loss.txt +1 -0
  40. rapidtide/data/models/model_cnn_pytorch/model.pth +0 -0
  41. rapidtide/data/models/model_cnn_pytorch/model_meta.json +68 -0
  42. rapidtide/data/models/model_cnn_pytorch_fulldata/loss.png +0 -0
  43. rapidtide/data/models/model_cnn_pytorch_fulldata/loss.txt +1 -0
  44. rapidtide/data/models/model_cnn_pytorch_fulldata/model.pth +0 -0
  45. rapidtide/data/models/model_cnn_pytorch_fulldata/model_meta.json +80 -0
  46. rapidtide/data/models/model_cnnbp_pytorch_fullldata/loss.png +0 -0
  47. rapidtide/data/models/model_cnnbp_pytorch_fullldata/loss.txt +1 -0
  48. rapidtide/data/models/model_cnnbp_pytorch_fullldata/model.pth +0 -0
  49. rapidtide/data/models/model_cnnbp_pytorch_fullldata/model_meta.json +138 -0
  50. rapidtide/data/models/model_cnnfft_pytorch_fulldata/loss.png +0 -0
  51. rapidtide/data/models/model_cnnfft_pytorch_fulldata/loss.txt +1 -0
  52. rapidtide/data/models/model_cnnfft_pytorch_fulldata/model.pth +0 -0
  53. rapidtide/data/models/model_cnnfft_pytorch_fulldata/model_meta.json +128 -0
  54. rapidtide/data/models/model_ppgattention_pytorch_w128_fulldata/loss.png +0 -0
  55. rapidtide/data/models/model_ppgattention_pytorch_w128_fulldata/loss.txt +1 -0
  56. rapidtide/data/models/model_ppgattention_pytorch_w128_fulldata/model.pth +0 -0
  57. rapidtide/data/models/model_ppgattention_pytorch_w128_fulldata/model_meta.json +49 -0
  58. rapidtide/data/models/model_revised_tf2/model.keras +0 -0
  59. rapidtide/data/models/{model_serdar → model_revised_tf2}/model_meta.json +1 -1
  60. rapidtide/data/models/model_serdar2_tf2/model.keras +0 -0
  61. rapidtide/data/models/{model_serdar2 → model_serdar2_tf2}/model_meta.json +1 -1
  62. rapidtide/data/models/model_serdar_tf2/model.keras +0 -0
  63. rapidtide/data/models/{model_revised → model_serdar_tf2}/model_meta.json +1 -1
  64. rapidtide/data/reference/HCP1200v2_MTT_2mm.nii.gz +0 -0
  65. rapidtide/data/reference/HCP1200v2_binmask_2mm.nii.gz +0 -0
  66. rapidtide/data/reference/HCP1200v2_csf_2mm.nii.gz +0 -0
  67. rapidtide/data/reference/HCP1200v2_gray_2mm.nii.gz +0 -0
  68. rapidtide/data/reference/HCP1200v2_graylaghist.json +7 -0
  69. rapidtide/data/reference/HCP1200v2_graylaghist.tsv.gz +0 -0
  70. rapidtide/data/reference/HCP1200v2_laghist.json +7 -0
  71. rapidtide/data/reference/HCP1200v2_laghist.tsv.gz +0 -0
  72. rapidtide/data/reference/HCP1200v2_mask_2mm.nii.gz +0 -0
  73. rapidtide/data/reference/HCP1200v2_maxcorr_2mm.nii.gz +0 -0
  74. rapidtide/data/reference/HCP1200v2_maxtime_2mm.nii.gz +0 -0
  75. rapidtide/data/reference/HCP1200v2_maxwidth_2mm.nii.gz +0 -0
  76. rapidtide/data/reference/HCP1200v2_negmask_2mm.nii.gz +0 -0
  77. rapidtide/data/reference/HCP1200v2_timepercentile_2mm.nii.gz +0 -0
  78. rapidtide/data/reference/HCP1200v2_white_2mm.nii.gz +0 -0
  79. rapidtide/data/reference/HCP1200v2_whitelaghist.json +7 -0
  80. rapidtide/data/reference/HCP1200v2_whitelaghist.tsv.gz +0 -0
  81. rapidtide/data/reference/JHU-ArterialTerritoriesNoVent-LVL1-seg2.xml +131 -0
  82. rapidtide/data/reference/JHU-ArterialTerritoriesNoVent-LVL1-seg2_regions.txt +60 -0
  83. rapidtide/data/reference/JHU-ArterialTerritoriesNoVent-LVL1-seg2_space-MNI152NLin6Asym_2mm.nii.gz +0 -0
  84. rapidtide/data/reference/JHU-ArterialTerritoriesNoVent-LVL1_space-MNI152NLin2009cAsym_2mm.nii.gz +0 -0
  85. rapidtide/data/reference/JHU-ArterialTerritoriesNoVent-LVL1_space-MNI152NLin2009cAsym_2mm_mask.nii.gz +0 -0
  86. rapidtide/data/reference/JHU-ArterialTerritoriesNoVent-LVL1_space-MNI152NLin6Asym_2mm_mask.nii.gz +0 -0
  87. rapidtide/data/reference/JHU-ArterialTerritoriesNoVent-LVL2_space-MNI152NLin6Asym_2mm_mask.nii.gz +0 -0
  88. rapidtide/data/reference/MNI152_T1_1mm_Brain_FAST_seg.nii.gz +0 -0
  89. rapidtide/data/reference/MNI152_T1_1mm_Brain_Mask.nii.gz +0 -0
  90. rapidtide/data/reference/MNI152_T1_2mm_Brain_FAST_seg.nii.gz +0 -0
  91. rapidtide/data/reference/MNI152_T1_2mm_Brain_Mask.nii.gz +0 -0
  92. rapidtide/decorators.py +91 -0
  93. rapidtide/dlfilter.py +2553 -414
  94. rapidtide/dlfiltertorch.py +5201 -0
  95. rapidtide/externaltools.py +328 -13
  96. rapidtide/fMRIData_class.py +108 -92
  97. rapidtide/ffttools.py +168 -0
  98. rapidtide/filter.py +2704 -1462
  99. rapidtide/fit.py +2361 -579
  100. rapidtide/genericmultiproc.py +197 -0
  101. rapidtide/happy_supportfuncs.py +3255 -548
  102. rapidtide/helper_classes.py +587 -1116
  103. rapidtide/io.py +2569 -468
  104. rapidtide/linfitfiltpass.py +784 -0
  105. rapidtide/makelaggedtcs.py +267 -97
  106. rapidtide/maskutil.py +555 -25
  107. rapidtide/miscmath.py +835 -144
  108. rapidtide/multiproc.py +217 -44
  109. rapidtide/patchmatch.py +752 -0
  110. rapidtide/peakeval.py +32 -32
  111. rapidtide/ppgproc.py +2205 -0
  112. rapidtide/qualitycheck.py +353 -40
  113. rapidtide/refinedelay.py +854 -0
  114. rapidtide/refineregressor.py +939 -0
  115. rapidtide/resample.py +725 -204
  116. rapidtide/scripts/__init__.py +1 -0
  117. rapidtide/scripts/{adjustoffset → adjustoffset.py} +7 -2
  118. rapidtide/scripts/{aligntcs → aligntcs.py} +7 -2
  119. rapidtide/scripts/{applydlfilter → applydlfilter.py} +7 -2
  120. rapidtide/scripts/applyppgproc.py +28 -0
  121. rapidtide/scripts/{atlasaverage → atlasaverage.py} +7 -2
  122. rapidtide/scripts/{atlastool → atlastool.py} +7 -2
  123. rapidtide/scripts/{calcicc → calcicc.py} +7 -2
  124. rapidtide/scripts/{calctexticc → calctexticc.py} +7 -2
  125. rapidtide/scripts/{calcttest → calcttest.py} +7 -2
  126. rapidtide/scripts/{ccorrica → ccorrica.py} +7 -2
  127. rapidtide/scripts/delayvar.py +28 -0
  128. rapidtide/scripts/{diffrois → diffrois.py} +7 -2
  129. rapidtide/scripts/{endtidalproc → endtidalproc.py} +7 -2
  130. rapidtide/scripts/{fdica → fdica.py} +7 -2
  131. rapidtide/scripts/{filtnifti → filtnifti.py} +7 -2
  132. rapidtide/scripts/{filttc → filttc.py} +7 -2
  133. rapidtide/scripts/{fingerprint → fingerprint.py} +20 -16
  134. rapidtide/scripts/{fixtr → fixtr.py} +7 -2
  135. rapidtide/scripts/{gmscalc → gmscalc.py} +7 -2
  136. rapidtide/scripts/{happy → happy.py} +7 -2
  137. rapidtide/scripts/{happy2std → happy2std.py} +7 -2
  138. rapidtide/scripts/{happywarp → happywarp.py} +8 -4
  139. rapidtide/scripts/{histnifti → histnifti.py} +7 -2
  140. rapidtide/scripts/{histtc → histtc.py} +7 -2
  141. rapidtide/scripts/{glmfilt → linfitfilt.py} +7 -4
  142. rapidtide/scripts/{localflow → localflow.py} +7 -2
  143. rapidtide/scripts/{mergequality → mergequality.py} +7 -2
  144. rapidtide/scripts/{pairproc → pairproc.py} +7 -2
  145. rapidtide/scripts/{pairwisemergenifti → pairwisemergenifti.py} +7 -2
  146. rapidtide/scripts/{physiofreq → physiofreq.py} +7 -2
  147. rapidtide/scripts/{pixelcomp → pixelcomp.py} +7 -2
  148. rapidtide/scripts/{plethquality → plethquality.py} +7 -2
  149. rapidtide/scripts/{polyfitim → polyfitim.py} +7 -2
  150. rapidtide/scripts/{proj2flow → proj2flow.py} +7 -2
  151. rapidtide/scripts/{rankimage → rankimage.py} +7 -2
  152. rapidtide/scripts/{rapidtide → rapidtide.py} +7 -2
  153. rapidtide/scripts/{rapidtide2std → rapidtide2std.py} +7 -2
  154. rapidtide/scripts/{resamplenifti → resamplenifti.py} +7 -2
  155. rapidtide/scripts/{resampletc → resampletc.py} +7 -2
  156. rapidtide/scripts/retrolagtcs.py +28 -0
  157. rapidtide/scripts/retroregress.py +28 -0
  158. rapidtide/scripts/{roisummarize → roisummarize.py} +7 -2
  159. rapidtide/scripts/{runqualitycheck → runqualitycheck.py} +7 -2
  160. rapidtide/scripts/{showarbcorr → showarbcorr.py} +7 -2
  161. rapidtide/scripts/{showhist → showhist.py} +7 -2
  162. rapidtide/scripts/{showstxcorr → showstxcorr.py} +7 -2
  163. rapidtide/scripts/{showtc → showtc.py} +7 -2
  164. rapidtide/scripts/{showxcorr_legacy → showxcorr_legacy.py} +8 -8
  165. rapidtide/scripts/{showxcorrx → showxcorrx.py} +7 -2
  166. rapidtide/scripts/{showxy → showxy.py} +7 -2
  167. rapidtide/scripts/{simdata → simdata.py} +7 -2
  168. rapidtide/scripts/{spatialdecomp → spatialdecomp.py} +7 -2
  169. rapidtide/scripts/{spatialfit → spatialfit.py} +7 -2
  170. rapidtide/scripts/{spatialmi → spatialmi.py} +7 -2
  171. rapidtide/scripts/{spectrogram → spectrogram.py} +7 -2
  172. rapidtide/scripts/stupidramtricks.py +238 -0
  173. rapidtide/scripts/{synthASL → synthASL.py} +7 -2
  174. rapidtide/scripts/{tcfrom2col → tcfrom2col.py} +7 -2
  175. rapidtide/scripts/{tcfrom3col → tcfrom3col.py} +7 -2
  176. rapidtide/scripts/{temporaldecomp → temporaldecomp.py} +7 -2
  177. rapidtide/scripts/{testhrv → testhrv.py} +1 -1
  178. rapidtide/scripts/{threeD → threeD.py} +7 -2
  179. rapidtide/scripts/{tidepool → tidepool.py} +7 -2
  180. rapidtide/scripts/{variabilityizer → variabilityizer.py} +7 -2
  181. rapidtide/simFuncClasses.py +2113 -0
  182. rapidtide/simfuncfit.py +312 -108
  183. rapidtide/stats.py +579 -247
  184. rapidtide/tests/.coveragerc +27 -6
  185. rapidtide-2.9.6.data/scripts/fdica → rapidtide/tests/cleanposttest +4 -6
  186. rapidtide/tests/happycomp +9 -0
  187. rapidtide/tests/resethappytargets +1 -1
  188. rapidtide/tests/resetrapidtidetargets +1 -1
  189. rapidtide/tests/resettargets +1 -1
  190. rapidtide/tests/runlocaltest +3 -3
  191. rapidtide/tests/showkernels +1 -1
  192. rapidtide/tests/test_aliasedcorrelate.py +4 -4
  193. rapidtide/tests/test_aligntcs.py +1 -1
  194. rapidtide/tests/test_calcicc.py +1 -1
  195. rapidtide/tests/test_cleanregressor.py +184 -0
  196. rapidtide/tests/test_congrid.py +70 -81
  197. rapidtide/tests/test_correlate.py +1 -1
  198. rapidtide/tests/test_corrpass.py +4 -4
  199. rapidtide/tests/test_delayestimation.py +54 -59
  200. rapidtide/tests/test_dlfiltertorch.py +437 -0
  201. rapidtide/tests/test_doresample.py +2 -2
  202. rapidtide/tests/test_externaltools.py +69 -0
  203. rapidtide/tests/test_fastresampler.py +9 -5
  204. rapidtide/tests/test_filter.py +96 -57
  205. rapidtide/tests/test_findmaxlag.py +50 -19
  206. rapidtide/tests/test_fullrunhappy_v1.py +15 -10
  207. rapidtide/tests/test_fullrunhappy_v2.py +19 -13
  208. rapidtide/tests/test_fullrunhappy_v3.py +28 -13
  209. rapidtide/tests/test_fullrunhappy_v4.py +30 -11
  210. rapidtide/tests/test_fullrunhappy_v5.py +62 -0
  211. rapidtide/tests/test_fullrunrapidtide_v1.py +61 -7
  212. rapidtide/tests/test_fullrunrapidtide_v2.py +26 -14
  213. rapidtide/tests/test_fullrunrapidtide_v3.py +28 -8
  214. rapidtide/tests/test_fullrunrapidtide_v4.py +16 -8
  215. rapidtide/tests/test_fullrunrapidtide_v5.py +15 -6
  216. rapidtide/tests/test_fullrunrapidtide_v6.py +142 -0
  217. rapidtide/tests/test_fullrunrapidtide_v7.py +114 -0
  218. rapidtide/tests/test_fullrunrapidtide_v8.py +66 -0
  219. rapidtide/tests/test_getparsers.py +158 -0
  220. rapidtide/tests/test_io.py +59 -18
  221. rapidtide/tests/{test_glmpass.py → test_linfitfiltpass.py} +10 -10
  222. rapidtide/tests/test_mi.py +1 -1
  223. rapidtide/tests/test_miscmath.py +1 -1
  224. rapidtide/tests/test_motionregress.py +5 -5
  225. rapidtide/tests/test_nullcorr.py +6 -9
  226. rapidtide/tests/test_padvec.py +216 -0
  227. rapidtide/tests/test_parserfuncs.py +101 -0
  228. rapidtide/tests/test_phaseanalysis.py +1 -1
  229. rapidtide/tests/test_rapidtideparser.py +59 -53
  230. rapidtide/tests/test_refinedelay.py +296 -0
  231. rapidtide/tests/test_runmisc.py +5 -5
  232. rapidtide/tests/test_sharedmem.py +60 -0
  233. rapidtide/tests/test_simroundtrip.py +132 -0
  234. rapidtide/tests/test_simulate.py +1 -1
  235. rapidtide/tests/test_stcorrelate.py +4 -2
  236. rapidtide/tests/test_timeshift.py +2 -2
  237. rapidtide/tests/test_valtoindex.py +1 -1
  238. rapidtide/tests/test_zRapidtideDataset.py +5 -3
  239. rapidtide/tests/utils.py +10 -9
  240. rapidtide/tidepoolTemplate.py +88 -70
  241. rapidtide/tidepoolTemplate.ui +60 -46
  242. rapidtide/tidepoolTemplate_alt.py +88 -53
  243. rapidtide/tidepoolTemplate_alt.ui +62 -52
  244. rapidtide/tidepoolTemplate_alt_qt6.py +921 -0
  245. rapidtide/tidepoolTemplate_big.py +1125 -0
  246. rapidtide/tidepoolTemplate_big.ui +2386 -0
  247. rapidtide/tidepoolTemplate_big_qt6.py +1129 -0
  248. rapidtide/tidepoolTemplate_qt6.py +793 -0
  249. rapidtide/util.py +1389 -148
  250. rapidtide/voxelData.py +1048 -0
  251. rapidtide/wiener.py +138 -25
  252. rapidtide/wiener2.py +114 -8
  253. rapidtide/workflows/adjustoffset.py +107 -5
  254. rapidtide/workflows/aligntcs.py +86 -3
  255. rapidtide/workflows/applydlfilter.py +231 -89
  256. rapidtide/workflows/applyppgproc.py +540 -0
  257. rapidtide/workflows/atlasaverage.py +309 -48
  258. rapidtide/workflows/atlastool.py +130 -9
  259. rapidtide/workflows/calcSimFuncMap.py +490 -0
  260. rapidtide/workflows/calctexticc.py +202 -10
  261. rapidtide/workflows/ccorrica.py +123 -15
  262. rapidtide/workflows/cleanregressor.py +415 -0
  263. rapidtide/workflows/delayvar.py +1268 -0
  264. rapidtide/workflows/diffrois.py +84 -6
  265. rapidtide/workflows/endtidalproc.py +149 -9
  266. rapidtide/workflows/fdica.py +197 -17
  267. rapidtide/workflows/filtnifti.py +71 -4
  268. rapidtide/workflows/filttc.py +76 -5
  269. rapidtide/workflows/fitSimFuncMap.py +578 -0
  270. rapidtide/workflows/fixtr.py +74 -4
  271. rapidtide/workflows/gmscalc.py +116 -6
  272. rapidtide/workflows/happy.py +1242 -480
  273. rapidtide/workflows/happy2std.py +145 -13
  274. rapidtide/workflows/happy_parser.py +277 -59
  275. rapidtide/workflows/histnifti.py +120 -4
  276. rapidtide/workflows/histtc.py +85 -4
  277. rapidtide/workflows/{glmfilt.py → linfitfilt.py} +128 -14
  278. rapidtide/workflows/localflow.py +329 -29
  279. rapidtide/workflows/mergequality.py +80 -4
  280. rapidtide/workflows/niftidecomp.py +323 -19
  281. rapidtide/workflows/niftistats.py +178 -8
  282. rapidtide/workflows/pairproc.py +99 -5
  283. rapidtide/workflows/pairwisemergenifti.py +86 -3
  284. rapidtide/workflows/parser_funcs.py +1488 -56
  285. rapidtide/workflows/physiofreq.py +139 -12
  286. rapidtide/workflows/pixelcomp.py +211 -9
  287. rapidtide/workflows/plethquality.py +105 -23
  288. rapidtide/workflows/polyfitim.py +159 -19
  289. rapidtide/workflows/proj2flow.py +76 -3
  290. rapidtide/workflows/rankimage.py +115 -8
  291. rapidtide/workflows/rapidtide.py +1785 -1858
  292. rapidtide/workflows/rapidtide2std.py +101 -3
  293. rapidtide/workflows/rapidtide_parser.py +590 -389
  294. rapidtide/workflows/refineDelayMap.py +249 -0
  295. rapidtide/workflows/refineRegressor.py +1215 -0
  296. rapidtide/workflows/regressfrommaps.py +308 -0
  297. rapidtide/workflows/resamplenifti.py +86 -4
  298. rapidtide/workflows/resampletc.py +92 -4
  299. rapidtide/workflows/retrolagtcs.py +442 -0
  300. rapidtide/workflows/retroregress.py +1501 -0
  301. rapidtide/workflows/roisummarize.py +176 -7
  302. rapidtide/workflows/runqualitycheck.py +72 -7
  303. rapidtide/workflows/showarbcorr.py +172 -16
  304. rapidtide/workflows/showhist.py +87 -3
  305. rapidtide/workflows/showstxcorr.py +161 -4
  306. rapidtide/workflows/showtc.py +172 -10
  307. rapidtide/workflows/showxcorrx.py +250 -62
  308. rapidtide/workflows/showxy.py +186 -16
  309. rapidtide/workflows/simdata.py +418 -112
  310. rapidtide/workflows/spatialfit.py +83 -8
  311. rapidtide/workflows/spatialmi.py +252 -29
  312. rapidtide/workflows/spectrogram.py +306 -33
  313. rapidtide/workflows/synthASL.py +157 -6
  314. rapidtide/workflows/tcfrom2col.py +77 -3
  315. rapidtide/workflows/tcfrom3col.py +75 -3
  316. rapidtide/workflows/tidepool.py +3829 -666
  317. rapidtide/workflows/utils.py +45 -19
  318. rapidtide/workflows/utils_doc.py +293 -0
  319. rapidtide/workflows/variabilityizer.py +118 -5
  320. {rapidtide-2.9.6.dist-info → rapidtide-3.1.3.dist-info}/METADATA +30 -223
  321. rapidtide-3.1.3.dist-info/RECORD +393 -0
  322. {rapidtide-2.9.6.dist-info → rapidtide-3.1.3.dist-info}/WHEEL +1 -1
  323. rapidtide-3.1.3.dist-info/entry_points.txt +65 -0
  324. rapidtide-3.1.3.dist-info/top_level.txt +2 -0
  325. rapidtide/calcandfitcorrpairs.py +0 -262
  326. rapidtide/data/examples/src/testoutputsize +0 -45
  327. rapidtide/data/models/model_revised/model.h5 +0 -0
  328. rapidtide/data/models/model_serdar/model.h5 +0 -0
  329. rapidtide/data/models/model_serdar2/model.h5 +0 -0
  330. rapidtide/data/reference/ASPECTS_nlin_asym_09c_2mm.nii.gz +0 -0
  331. rapidtide/data/reference/ASPECTS_nlin_asym_09c_2mm_mask.nii.gz +0 -0
  332. rapidtide/data/reference/ATTbasedFlowTerritories_split_nlin_asym_09c_2mm.nii.gz +0 -0
  333. rapidtide/data/reference/ATTbasedFlowTerritories_split_nlin_asym_09c_2mm_mask.nii.gz +0 -0
  334. rapidtide/data/reference/HCP1200_binmask_2mm_2009c_asym.nii.gz +0 -0
  335. rapidtide/data/reference/HCP1200_lag_2mm_2009c_asym.nii.gz +0 -0
  336. rapidtide/data/reference/HCP1200_mask_2mm_2009c_asym.nii.gz +0 -0
  337. rapidtide/data/reference/HCP1200_negmask_2mm_2009c_asym.nii.gz +0 -0
  338. rapidtide/data/reference/HCP1200_sigma_2mm_2009c_asym.nii.gz +0 -0
  339. rapidtide/data/reference/HCP1200_strength_2mm_2009c_asym.nii.gz +0 -0
  340. rapidtide/glmpass.py +0 -434
  341. rapidtide/refine_factored.py +0 -641
  342. rapidtide/scripts/retroglm +0 -23
  343. rapidtide/workflows/glmfrommaps.py +0 -202
  344. rapidtide/workflows/retroglm.py +0 -643
  345. rapidtide-2.9.6.data/scripts/adjustoffset +0 -23
  346. rapidtide-2.9.6.data/scripts/aligntcs +0 -23
  347. rapidtide-2.9.6.data/scripts/applydlfilter +0 -23
  348. rapidtide-2.9.6.data/scripts/atlasaverage +0 -23
  349. rapidtide-2.9.6.data/scripts/atlastool +0 -23
  350. rapidtide-2.9.6.data/scripts/calcicc +0 -22
  351. rapidtide-2.9.6.data/scripts/calctexticc +0 -23
  352. rapidtide-2.9.6.data/scripts/calcttest +0 -22
  353. rapidtide-2.9.6.data/scripts/ccorrica +0 -23
  354. rapidtide-2.9.6.data/scripts/diffrois +0 -23
  355. rapidtide-2.9.6.data/scripts/endtidalproc +0 -23
  356. rapidtide-2.9.6.data/scripts/filtnifti +0 -23
  357. rapidtide-2.9.6.data/scripts/filttc +0 -23
  358. rapidtide-2.9.6.data/scripts/fingerprint +0 -593
  359. rapidtide-2.9.6.data/scripts/fixtr +0 -23
  360. rapidtide-2.9.6.data/scripts/glmfilt +0 -24
  361. rapidtide-2.9.6.data/scripts/gmscalc +0 -22
  362. rapidtide-2.9.6.data/scripts/happy +0 -25
  363. rapidtide-2.9.6.data/scripts/happy2std +0 -23
  364. rapidtide-2.9.6.data/scripts/happywarp +0 -350
  365. rapidtide-2.9.6.data/scripts/histnifti +0 -23
  366. rapidtide-2.9.6.data/scripts/histtc +0 -23
  367. rapidtide-2.9.6.data/scripts/localflow +0 -23
  368. rapidtide-2.9.6.data/scripts/mergequality +0 -23
  369. rapidtide-2.9.6.data/scripts/pairproc +0 -23
  370. rapidtide-2.9.6.data/scripts/pairwisemergenifti +0 -23
  371. rapidtide-2.9.6.data/scripts/physiofreq +0 -23
  372. rapidtide-2.9.6.data/scripts/pixelcomp +0 -23
  373. rapidtide-2.9.6.data/scripts/plethquality +0 -23
  374. rapidtide-2.9.6.data/scripts/polyfitim +0 -23
  375. rapidtide-2.9.6.data/scripts/proj2flow +0 -23
  376. rapidtide-2.9.6.data/scripts/rankimage +0 -23
  377. rapidtide-2.9.6.data/scripts/rapidtide +0 -23
  378. rapidtide-2.9.6.data/scripts/rapidtide2std +0 -23
  379. rapidtide-2.9.6.data/scripts/resamplenifti +0 -23
  380. rapidtide-2.9.6.data/scripts/resampletc +0 -23
  381. rapidtide-2.9.6.data/scripts/retroglm +0 -23
  382. rapidtide-2.9.6.data/scripts/roisummarize +0 -23
  383. rapidtide-2.9.6.data/scripts/runqualitycheck +0 -23
  384. rapidtide-2.9.6.data/scripts/showarbcorr +0 -23
  385. rapidtide-2.9.6.data/scripts/showhist +0 -23
  386. rapidtide-2.9.6.data/scripts/showstxcorr +0 -23
  387. rapidtide-2.9.6.data/scripts/showtc +0 -23
  388. rapidtide-2.9.6.data/scripts/showxcorr_legacy +0 -536
  389. rapidtide-2.9.6.data/scripts/showxcorrx +0 -23
  390. rapidtide-2.9.6.data/scripts/showxy +0 -23
  391. rapidtide-2.9.6.data/scripts/simdata +0 -23
  392. rapidtide-2.9.6.data/scripts/spatialdecomp +0 -23
  393. rapidtide-2.9.6.data/scripts/spatialfit +0 -23
  394. rapidtide-2.9.6.data/scripts/spatialmi +0 -23
  395. rapidtide-2.9.6.data/scripts/spectrogram +0 -23
  396. rapidtide-2.9.6.data/scripts/synthASL +0 -23
  397. rapidtide-2.9.6.data/scripts/tcfrom2col +0 -23
  398. rapidtide-2.9.6.data/scripts/tcfrom3col +0 -23
  399. rapidtide-2.9.6.data/scripts/temporaldecomp +0 -23
  400. rapidtide-2.9.6.data/scripts/threeD +0 -236
  401. rapidtide-2.9.6.data/scripts/tidepool +0 -23
  402. rapidtide-2.9.6.data/scripts/variabilityizer +0 -23
  403. rapidtide-2.9.6.dist-info/RECORD +0 -359
  404. rapidtide-2.9.6.dist-info/top_level.txt +0 -86
  405. {rapidtide-2.9.6.dist-info → rapidtide-3.1.3.dist-info/licenses}/LICENSE +0 -0
@@ -2,9 +2,10 @@
2
2
 
3
3
  # Form implementation generated from reading ui file 'tidepoolTemplate_alt.ui'
4
4
  #
5
- # Created by: PyQt5 UI code generator 5.12.3
5
+ # Created by: PyQt5 UI code generator 5.15.11
6
6
  #
7
- # WARNING! All changes made in this file will be lost!
7
+ # WARNING: Any manual changes made to this file will be lost when pyuic5 is
8
+ # run again. Do not edit this file unless you know what you are doing.
8
9
 
9
10
 
10
11
  from PyQt5 import QtCore, QtGui, QtWidgets
@@ -13,7 +14,7 @@ from PyQt5 import QtCore, QtGui, QtWidgets
13
14
  class Ui_MainWindow(object):
14
15
  def setupUi(self, MainWindow):
15
16
  MainWindow.setObjectName("MainWindow")
16
- MainWindow.resize(1373, 815)
17
+ MainWindow.resize(1375, 805)
17
18
  sizePolicy = QtWidgets.QSizePolicy(
18
19
  QtWidgets.QSizePolicy.MinimumExpanding, QtWidgets.QSizePolicy.MinimumExpanding
19
20
  )
@@ -21,8 +22,8 @@ class Ui_MainWindow(object):
21
22
  sizePolicy.setVerticalStretch(1)
22
23
  sizePolicy.setHeightForWidth(MainWindow.sizePolicy().hasHeightForWidth())
23
24
  MainWindow.setSizePolicy(sizePolicy)
24
- MainWindow.setMinimumSize(QtCore.QSize(256, 256))
25
- MainWindow.setMaximumSize(QtCore.QSize(1400, 16777215))
25
+ MainWindow.setMinimumSize(QtCore.QSize(1375, 805))
26
+ MainWindow.setMaximumSize(QtCore.QSize(1375, 805))
26
27
  MainWindow.setSizeIncrement(QtCore.QSize(1, 1))
27
28
  self.centralwidget = QtWidgets.QWidget(MainWindow)
28
29
  self.centralwidget.setObjectName("centralwidget")
@@ -45,16 +46,18 @@ class Ui_MainWindow(object):
45
46
  self.gridLayout = QtWidgets.QGridLayout(self.imageData_groupBox)
46
47
  self.gridLayout.setObjectName("gridLayout")
47
48
  self.gridLayout_2 = QtWidgets.QGridLayout()
48
- self.gridLayout_2.setSizeConstraint(QtWidgets.QLayout.SetMaximumSize)
49
+ self.gridLayout_2.setSizeConstraint(QtCore.Qt.QLayout.SizeConstraint.SetMaximumSize)
49
50
  self.gridLayout_2.setObjectName("gridLayout_2")
50
51
  self.verticalLayout_3 = QtWidgets.QVBoxLayout()
51
- self.verticalLayout_3.setSizeConstraint(QtWidgets.QLayout.SetFixedSize)
52
+ self.verticalLayout_3.setSizeConstraint(QtCore.Qt.QLayout.SizeConstraint.SetFixedSize)
52
53
  self.verticalLayout_3.setContentsMargins(-1, 5, -1, 5)
53
54
  self.verticalLayout_3.setSpacing(0)
54
55
  self.verticalLayout_3.setObjectName("verticalLayout_3")
55
56
  self.dispmax_doubleSpinBox = QtWidgets.QDoubleSpinBox(self.imageData_groupBox)
56
57
  self.dispmax_doubleSpinBox.setAlignment(
57
- QtCore.Qt.AlignRight | QtCore.Qt.AlignTrailing | QtCore.Qt.AlignVCenter
58
+ QtCore.Qt.Qt.AlignmentFlag.AlignRight
59
+ | QtCore.Qt.Qt.AlignmentFlag.AlignTrailing
60
+ | QtCore.Qt.Qt.AlignmentFlag.AlignVCenter
58
61
  )
59
62
  self.dispmax_doubleSpinBox.setDecimals(3)
60
63
  self.dispmax_doubleSpinBox.setObjectName("dispmax_doubleSpinBox")
@@ -73,7 +76,9 @@ class Ui_MainWindow(object):
73
76
  self.verticalLayout_3.addWidget(self.setMask_Button)
74
77
  self.dispmin_doubleSpinBox = QtWidgets.QDoubleSpinBox(self.imageData_groupBox)
75
78
  self.dispmin_doubleSpinBox.setAlignment(
76
- QtCore.Qt.AlignRight | QtCore.Qt.AlignTrailing | QtCore.Qt.AlignVCenter
79
+ QtCore.Qt.Qt.AlignmentFlag.AlignRight
80
+ | QtCore.Qt.Qt.AlignmentFlag.AlignTrailing
81
+ | QtCore.Qt.Qt.AlignmentFlag.AlignVCenter
77
82
  )
78
83
  self.dispmin_doubleSpinBox.setDecimals(3)
79
84
  self.dispmin_doubleSpinBox.setObjectName("dispmin_doubleSpinBox")
@@ -94,11 +99,15 @@ class Ui_MainWindow(object):
94
99
  self.graphicsView_colorbar.setMinimumSize(QtCore.QSize(25, 128))
95
100
  self.graphicsView_colorbar.setMaximumSize(QtCore.QSize(25, 256))
96
101
  self.graphicsView_colorbar.setSizeIncrement(QtCore.QSize(0, 1))
97
- self.graphicsView_colorbar.setResizeAnchor(QtWidgets.QGraphicsView.AnchorViewCenter)
102
+ self.graphicsView_colorbar.setResizeAnchor(
103
+ QtCore.Qt.QGraphicsView.ViewportAnchor.AnchorViewCenter
104
+ )
98
105
  self.graphicsView_colorbar.setObjectName("graphicsView_colorbar")
99
106
  self.gridLayout_2.addWidget(self.graphicsView_colorbar, 0, 0, 1, 1)
100
107
  self.aspects_verticalLayout = QtWidgets.QVBoxLayout()
101
- self.aspects_verticalLayout.setSizeConstraint(QtWidgets.QLayout.SetMinimumSize)
108
+ self.aspects_verticalLayout.setSizeConstraint(
109
+ QtCore.Qt.QLayout.SizeConstraint.SetMinimumSize
110
+ )
102
111
  self.aspects_verticalLayout.setSpacing(0)
103
112
  self.aspects_verticalLayout.setObjectName("aspects_verticalLayout")
104
113
  self.verticalLayout_4 = QtWidgets.QVBoxLayout()
@@ -196,14 +205,14 @@ class Ui_MainWindow(object):
196
205
  self.median_radioButton.setObjectName("median_radioButton")
197
206
  self.stats_buttonGroup.addButton(self.median_radioButton)
198
207
  self.aspects_verticalLayout.addWidget(self.median_radioButton)
199
- self.robustmean_radioButton = QtWidgets.QRadioButton(self.imageData_groupBox)
208
+ self.CoV_radioButton = QtWidgets.QRadioButton(self.imageData_groupBox)
200
209
  font = QtGui.QFont()
201
210
  font.setFamily("Arial Narrow")
202
211
  font.setPointSize(10)
203
- self.robustmean_radioButton.setFont(font)
204
- self.robustmean_radioButton.setObjectName("robustmean_radioButton")
205
- self.stats_buttonGroup.addButton(self.robustmean_radioButton)
206
- self.aspects_verticalLayout.addWidget(self.robustmean_radioButton)
212
+ self.CoV_radioButton.setFont(font)
213
+ self.CoV_radioButton.setObjectName("CoV_radioButton")
214
+ self.stats_buttonGroup.addButton(self.CoV_radioButton)
215
+ self.aspects_verticalLayout.addWidget(self.CoV_radioButton)
207
216
  self.std_radioButton = QtWidgets.QRadioButton(self.imageData_groupBox)
208
217
  font = QtGui.QFont()
209
218
  font.setFamily("Arial Narrow")
@@ -233,8 +242,8 @@ class Ui_MainWindow(object):
233
242
  self.main_graphicsView_cor.setMinimumSize(QtCore.QSize(256, 128))
234
243
  self.main_graphicsView_cor.setMaximumSize(QtCore.QSize(256, 256))
235
244
  self.main_graphicsView_cor.setSizeIncrement(QtCore.QSize(1, 1))
236
- self.main_graphicsView_cor.setFrameShape(QtWidgets.QFrame.NoFrame)
237
- self.main_graphicsView_cor.setAlignment(QtCore.Qt.AlignCenter)
245
+ self.main_graphicsView_cor.setFrameShape(QtCore.Qt.QFrame.Shape.NoFrame)
246
+ self.main_graphicsView_cor.setAlignment(QtCore.Qt.Qt.AlignmentFlag.AlignCenter)
238
247
  self.main_graphicsView_cor.setObjectName("main_graphicsView_cor")
239
248
  self.gridLayout.addWidget(self.main_graphicsView_cor, 1, 2, 1, 1)
240
249
  self.main_graphicsView_sag = GraphicsLayoutWidget(self.imageData_groupBox)
@@ -248,8 +257,8 @@ class Ui_MainWindow(object):
248
257
  self.main_graphicsView_sag.setMinimumSize(QtCore.QSize(256, 256))
249
258
  self.main_graphicsView_sag.setMaximumSize(QtCore.QSize(256, 256))
250
259
  self.main_graphicsView_sag.setSizeIncrement(QtCore.QSize(1, 1))
251
- self.main_graphicsView_sag.setFrameShape(QtWidgets.QFrame.NoFrame)
252
- self.main_graphicsView_sag.setAlignment(QtCore.Qt.AlignCenter)
260
+ self.main_graphicsView_sag.setFrameShape(QtCore.Qt.QFrame.Shape.NoFrame)
261
+ self.main_graphicsView_sag.setAlignment(QtCore.Qt.Qt.AlignmentFlag.AlignCenter)
253
262
  self.main_graphicsView_sag.setObjectName("main_graphicsView_sag")
254
263
  self.gridLayout.addWidget(self.main_graphicsView_sag, 2, 1, 1, 1)
255
264
  self.main_graphicsView_ax = GraphicsLayoutWidget(self.imageData_groupBox)
@@ -263,10 +272,10 @@ class Ui_MainWindow(object):
263
272
  self.main_graphicsView_ax.setMinimumSize(QtCore.QSize(256, 256))
264
273
  self.main_graphicsView_ax.setMaximumSize(QtCore.QSize(256, 256))
265
274
  self.main_graphicsView_ax.setSizeIncrement(QtCore.QSize(1, 1))
266
- self.main_graphicsView_ax.setFrameShape(QtWidgets.QFrame.NoFrame)
267
- self.main_graphicsView_ax.setAlignment(QtCore.Qt.AlignCenter)
275
+ self.main_graphicsView_ax.setFrameShape(QtCore.Qt.QFrame.Shape.NoFrame)
276
+ self.main_graphicsView_ax.setAlignment(QtCore.Qt.Qt.AlignmentFlag.AlignCenter)
268
277
  self.main_graphicsView_ax.setViewportUpdateMode(
269
- QtWidgets.QGraphicsView.SmartViewportUpdate
278
+ QtCore.Qt.QGraphicsView.ViewportUpdateMode.SmartViewportUpdate
270
279
  )
271
280
  self.main_graphicsView_ax.setObjectName("main_graphicsView_ax")
272
281
  self.gridLayout.addWidget(self.main_graphicsView_ax, 1, 1, 1, 1)
@@ -288,6 +297,7 @@ class Ui_MainWindow(object):
288
297
  self.overlay_radioButton_05 = QtWidgets.QRadioButton(self.overlays_groupBox)
289
298
  self.overlay_radioButton_05.setGeometry(QtCore.QRect(10, 351, 151, 20))
290
299
  font = QtGui.QFont()
300
+ font.setFamily(".AppleSystemUIFont")
291
301
  font.setPointSize(10)
292
302
  self.overlay_radioButton_05.setFont(font)
293
303
  self.overlay_radioButton_05.setStyleSheet("color: rgb(255, 255, 255);")
@@ -303,12 +313,13 @@ class Ui_MainWindow(object):
303
313
  self.overlay_graphicsView_01.setSizePolicy(sizePolicy)
304
314
  self.overlay_graphicsView_01.setMinimumSize(QtCore.QSize(192, 64))
305
315
  self.overlay_graphicsView_01.setMaximumSize(QtCore.QSize(192, 64))
306
- self.overlay_graphicsView_01.setFrameShape(QtWidgets.QFrame.NoFrame)
307
- self.overlay_graphicsView_01.setAlignment(QtCore.Qt.AlignCenter)
316
+ self.overlay_graphicsView_01.setFrameShape(QtCore.Qt.QFrame.Shape.NoFrame)
317
+ self.overlay_graphicsView_01.setAlignment(QtCore.Qt.Qt.AlignmentFlag.AlignCenter)
308
318
  self.overlay_graphicsView_01.setObjectName("overlay_graphicsView_01")
309
319
  self.overlay_radioButton_01 = QtWidgets.QRadioButton(self.overlays_groupBox)
310
320
  self.overlay_radioButton_01.setGeometry(QtCore.QRect(10, 71, 151, 20))
311
321
  font = QtGui.QFont()
322
+ font.setFamily(".AppleSystemUIFont")
312
323
  font.setPointSize(10)
313
324
  self.overlay_radioButton_01.setFont(font)
314
325
  self.overlay_radioButton_01.setAutoFillBackground(False)
@@ -317,6 +328,7 @@ class Ui_MainWindow(object):
317
328
  self.overlay_radioButton_02 = QtWidgets.QRadioButton(self.overlays_groupBox)
318
329
  self.overlay_radioButton_02.setGeometry(QtCore.QRect(10, 141, 151, 20))
319
330
  font = QtGui.QFont()
331
+ font.setFamily(".AppleSystemUIFont")
320
332
  font.setPointSize(10)
321
333
  self.overlay_radioButton_02.setFont(font)
322
334
  self.overlay_radioButton_02.setStyleSheet("color: rgb(255, 255, 255);")
@@ -324,6 +336,7 @@ class Ui_MainWindow(object):
324
336
  self.overlay_radioButton_03 = QtWidgets.QRadioButton(self.overlays_groupBox)
325
337
  self.overlay_radioButton_03.setGeometry(QtCore.QRect(10, 211, 151, 20))
326
338
  font = QtGui.QFont()
339
+ font.setFamily(".AppleSystemUIFont")
327
340
  font.setPointSize(10)
328
341
  self.overlay_radioButton_03.setFont(font)
329
342
  self.overlay_radioButton_03.setStyleSheet("color: rgb(255, 255, 255);")
@@ -331,6 +344,7 @@ class Ui_MainWindow(object):
331
344
  self.overlay_radioButton_04 = QtWidgets.QRadioButton(self.overlays_groupBox)
332
345
  self.overlay_radioButton_04.setGeometry(QtCore.QRect(10, 281, 151, 20))
333
346
  font = QtGui.QFont()
347
+ font.setFamily(".AppleSystemUIFont")
334
348
  font.setPointSize(10)
335
349
  self.overlay_radioButton_04.setFont(font)
336
350
  self.overlay_radioButton_04.setStyleSheet("color: rgb(255, 255, 255);")
@@ -346,6 +360,7 @@ class Ui_MainWindow(object):
346
360
  self.overlay_radioButton_06 = QtWidgets.QRadioButton(self.overlays_groupBox)
347
361
  self.overlay_radioButton_06.setGeometry(QtCore.QRect(10, 421, 151, 20))
348
362
  font = QtGui.QFont()
363
+ font.setFamily(".AppleSystemUIFont")
349
364
  font.setPointSize(10)
350
365
  self.overlay_radioButton_06.setFont(font)
351
366
  self.overlay_radioButton_06.setStyleSheet("color: rgb(255, 255, 255);")
@@ -353,6 +368,7 @@ class Ui_MainWindow(object):
353
368
  self.overlay_radioButton_07 = QtWidgets.QRadioButton(self.overlays_groupBox)
354
369
  self.overlay_radioButton_07.setGeometry(QtCore.QRect(10, 491, 151, 20))
355
370
  font = QtGui.QFont()
371
+ font.setFamily(".AppleSystemUIFont")
356
372
  font.setPointSize(10)
357
373
  self.overlay_radioButton_07.setFont(font)
358
374
  self.overlay_radioButton_07.setStyleSheet("color: rgb(255, 255, 255);")
@@ -360,6 +376,7 @@ class Ui_MainWindow(object):
360
376
  self.overlay_radioButton_08 = QtWidgets.QRadioButton(self.overlays_groupBox)
361
377
  self.overlay_radioButton_08.setGeometry(QtCore.QRect(10, 561, 151, 20))
362
378
  font = QtGui.QFont()
379
+ font.setFamily(".AppleSystemUIFont")
363
380
  font.setPointSize(10)
364
381
  self.overlay_radioButton_08.setFont(font)
365
382
  self.overlay_radioButton_08.setStyleSheet("color: rgb(255, 255, 255);")
@@ -375,8 +392,8 @@ class Ui_MainWindow(object):
375
392
  self.overlay_graphicsView_04.setSizePolicy(sizePolicy)
376
393
  self.overlay_graphicsView_04.setMinimumSize(QtCore.QSize(192, 64))
377
394
  self.overlay_graphicsView_04.setMaximumSize(QtCore.QSize(192, 64))
378
- self.overlay_graphicsView_04.setFrameShape(QtWidgets.QFrame.NoFrame)
379
- self.overlay_graphicsView_04.setAlignment(QtCore.Qt.AlignCenter)
395
+ self.overlay_graphicsView_04.setFrameShape(QtCore.Qt.QFrame.Shape.NoFrame)
396
+ self.overlay_graphicsView_04.setAlignment(QtCore.Qt.Qt.AlignmentFlag.AlignCenter)
380
397
  self.overlay_graphicsView_04.setObjectName("overlay_graphicsView_04")
381
398
  self.overlay_graphicsView_06 = GraphicsLayoutWidget(self.overlays_groupBox)
382
399
  self.overlay_graphicsView_06.setGeometry(QtCore.QRect(10, 375, 192, 64))
@@ -389,8 +406,8 @@ class Ui_MainWindow(object):
389
406
  self.overlay_graphicsView_06.setSizePolicy(sizePolicy)
390
407
  self.overlay_graphicsView_06.setMinimumSize(QtCore.QSize(192, 64))
391
408
  self.overlay_graphicsView_06.setMaximumSize(QtCore.QSize(192, 64))
392
- self.overlay_graphicsView_06.setFrameShape(QtWidgets.QFrame.NoFrame)
393
- self.overlay_graphicsView_06.setAlignment(QtCore.Qt.AlignCenter)
409
+ self.overlay_graphicsView_06.setFrameShape(QtCore.Qt.QFrame.Shape.NoFrame)
410
+ self.overlay_graphicsView_06.setAlignment(QtCore.Qt.Qt.AlignmentFlag.AlignCenter)
394
411
  self.overlay_graphicsView_06.setObjectName("overlay_graphicsView_06")
395
412
  self.overlay_graphicsView_03 = GraphicsLayoutWidget(self.overlays_groupBox)
396
413
  self.overlay_graphicsView_03.setGeometry(QtCore.QRect(10, 165, 192, 64))
@@ -403,8 +420,8 @@ class Ui_MainWindow(object):
403
420
  self.overlay_graphicsView_03.setSizePolicy(sizePolicy)
404
421
  self.overlay_graphicsView_03.setMinimumSize(QtCore.QSize(192, 64))
405
422
  self.overlay_graphicsView_03.setMaximumSize(QtCore.QSize(192, 64))
406
- self.overlay_graphicsView_03.setFrameShape(QtWidgets.QFrame.NoFrame)
407
- self.overlay_graphicsView_03.setAlignment(QtCore.Qt.AlignCenter)
423
+ self.overlay_graphicsView_03.setFrameShape(QtCore.Qt.QFrame.Shape.NoFrame)
424
+ self.overlay_graphicsView_03.setAlignment(QtCore.Qt.Qt.AlignmentFlag.AlignCenter)
408
425
  self.overlay_graphicsView_03.setObjectName("overlay_graphicsView_03")
409
426
  self.overlay_graphicsView_08 = GraphicsLayoutWidget(self.overlays_groupBox)
410
427
  self.overlay_graphicsView_08.setGeometry(QtCore.QRect(10, 515, 192, 64))
@@ -417,8 +434,8 @@ class Ui_MainWindow(object):
417
434
  self.overlay_graphicsView_08.setSizePolicy(sizePolicy)
418
435
  self.overlay_graphicsView_08.setMinimumSize(QtCore.QSize(192, 64))
419
436
  self.overlay_graphicsView_08.setMaximumSize(QtCore.QSize(192, 64))
420
- self.overlay_graphicsView_08.setFrameShape(QtWidgets.QFrame.NoFrame)
421
- self.overlay_graphicsView_08.setAlignment(QtCore.Qt.AlignCenter)
437
+ self.overlay_graphicsView_08.setFrameShape(QtCore.Qt.QFrame.Shape.NoFrame)
438
+ self.overlay_graphicsView_08.setAlignment(QtCore.Qt.Qt.AlignmentFlag.AlignCenter)
422
439
  self.overlay_graphicsView_08.setObjectName("overlay_graphicsView_08")
423
440
  self.overlay_graphicsView_05 = GraphicsLayoutWidget(self.overlays_groupBox)
424
441
  self.overlay_graphicsView_05.setGeometry(QtCore.QRect(10, 305, 192, 64))
@@ -431,8 +448,8 @@ class Ui_MainWindow(object):
431
448
  self.overlay_graphicsView_05.setSizePolicy(sizePolicy)
432
449
  self.overlay_graphicsView_05.setMinimumSize(QtCore.QSize(192, 64))
433
450
  self.overlay_graphicsView_05.setMaximumSize(QtCore.QSize(192, 64))
434
- self.overlay_graphicsView_05.setFrameShape(QtWidgets.QFrame.NoFrame)
435
- self.overlay_graphicsView_05.setAlignment(QtCore.Qt.AlignCenter)
451
+ self.overlay_graphicsView_05.setFrameShape(QtCore.Qt.QFrame.Shape.NoFrame)
452
+ self.overlay_graphicsView_05.setAlignment(QtCore.Qt.Qt.AlignmentFlag.AlignCenter)
436
453
  self.overlay_graphicsView_05.setObjectName("overlay_graphicsView_05")
437
454
  self.overlay_graphicsView_02 = GraphicsLayoutWidget(self.overlays_groupBox)
438
455
  self.overlay_graphicsView_02.setGeometry(QtCore.QRect(10, 95, 192, 64))
@@ -445,8 +462,8 @@ class Ui_MainWindow(object):
445
462
  self.overlay_graphicsView_02.setSizePolicy(sizePolicy)
446
463
  self.overlay_graphicsView_02.setMinimumSize(QtCore.QSize(192, 64))
447
464
  self.overlay_graphicsView_02.setMaximumSize(QtCore.QSize(192, 64))
448
- self.overlay_graphicsView_02.setFrameShape(QtWidgets.QFrame.NoFrame)
449
- self.overlay_graphicsView_02.setAlignment(QtCore.Qt.AlignCenter)
465
+ self.overlay_graphicsView_02.setFrameShape(QtCore.Qt.QFrame.Shape.NoFrame)
466
+ self.overlay_graphicsView_02.setAlignment(QtCore.Qt.Qt.AlignmentFlag.AlignCenter)
450
467
  self.overlay_graphicsView_02.setObjectName("overlay_graphicsView_02")
451
468
  self.overlay_graphicsView_07 = GraphicsLayoutWidget(self.overlays_groupBox)
452
469
  self.overlay_graphicsView_07.setGeometry(QtCore.QRect(10, 445, 192, 64))
@@ -459,8 +476,8 @@ class Ui_MainWindow(object):
459
476
  self.overlay_graphicsView_07.setSizePolicy(sizePolicy)
460
477
  self.overlay_graphicsView_07.setMinimumSize(QtCore.QSize(192, 64))
461
478
  self.overlay_graphicsView_07.setMaximumSize(QtCore.QSize(192, 64))
462
- self.overlay_graphicsView_07.setFrameShape(QtWidgets.QFrame.NoFrame)
463
- self.overlay_graphicsView_07.setAlignment(QtCore.Qt.AlignCenter)
479
+ self.overlay_graphicsView_07.setFrameShape(QtCore.Qt.QFrame.Shape.NoFrame)
480
+ self.overlay_graphicsView_07.setAlignment(QtCore.Qt.Qt.AlignmentFlag.AlignCenter)
464
481
  self.overlay_graphicsView_07.setObjectName("overlay_graphicsView_07")
465
482
  self.overlay_graphicsView_04.raise_()
466
483
  self.overlay_graphicsView_01.raise_()
@@ -518,7 +535,9 @@ class Ui_MainWindow(object):
518
535
  self.pixnumX_doubleSpinBox = QtWidgets.QDoubleSpinBox(self.mainimagedata_groupBox)
519
536
  self.pixnumX_doubleSpinBox.setGeometry(QtCore.QRect(30, 30, 67, 24))
520
537
  self.pixnumX_doubleSpinBox.setAlignment(
521
- QtCore.Qt.AlignRight | QtCore.Qt.AlignTrailing | QtCore.Qt.AlignVCenter
538
+ QtCore.Qt.Qt.AlignmentFlag.AlignRight
539
+ | QtCore.Qt.Qt.AlignmentFlag.AlignTrailing
540
+ | QtCore.Qt.Qt.AlignmentFlag.AlignVCenter
522
541
  )
523
542
  self.pixnumX_doubleSpinBox.setDecimals(0)
524
543
  self.pixnumX_doubleSpinBox.setObjectName("pixnumX_doubleSpinBox")
@@ -531,7 +550,9 @@ class Ui_MainWindow(object):
531
550
  self.coordX_doubleSpinBox = QtWidgets.QDoubleSpinBox(self.mainimagedata_groupBox)
532
551
  self.coordX_doubleSpinBox.setGeometry(QtCore.QRect(100, 30, 67, 24))
533
552
  self.coordX_doubleSpinBox.setAlignment(
534
- QtCore.Qt.AlignRight | QtCore.Qt.AlignTrailing | QtCore.Qt.AlignVCenter
553
+ QtCore.Qt.Qt.AlignmentFlag.AlignRight
554
+ | QtCore.Qt.Qt.AlignmentFlag.AlignTrailing
555
+ | QtCore.Qt.Qt.AlignmentFlag.AlignVCenter
535
556
  )
536
557
  self.coordX_doubleSpinBox.setDecimals(3)
537
558
  self.coordX_doubleSpinBox.setObjectName("coordX_doubleSpinBox")
@@ -544,28 +565,36 @@ class Ui_MainWindow(object):
544
565
  self.pixnumY_doubleSpinBox = QtWidgets.QDoubleSpinBox(self.mainimagedata_groupBox)
545
566
  self.pixnumY_doubleSpinBox.setGeometry(QtCore.QRect(30, 55, 67, 24))
546
567
  self.pixnumY_doubleSpinBox.setAlignment(
547
- QtCore.Qt.AlignRight | QtCore.Qt.AlignTrailing | QtCore.Qt.AlignVCenter
568
+ QtCore.Qt.Qt.AlignmentFlag.AlignRight
569
+ | QtCore.Qt.Qt.AlignmentFlag.AlignTrailing
570
+ | QtCore.Qt.Qt.AlignmentFlag.AlignVCenter
548
571
  )
549
572
  self.pixnumY_doubleSpinBox.setDecimals(0)
550
573
  self.pixnumY_doubleSpinBox.setObjectName("pixnumY_doubleSpinBox")
551
574
  self.coordY_doubleSpinBox = QtWidgets.QDoubleSpinBox(self.mainimagedata_groupBox)
552
575
  self.coordY_doubleSpinBox.setGeometry(QtCore.QRect(100, 55, 67, 24))
553
576
  self.coordY_doubleSpinBox.setAlignment(
554
- QtCore.Qt.AlignRight | QtCore.Qt.AlignTrailing | QtCore.Qt.AlignVCenter
577
+ QtCore.Qt.Qt.AlignmentFlag.AlignRight
578
+ | QtCore.Qt.Qt.AlignmentFlag.AlignTrailing
579
+ | QtCore.Qt.Qt.AlignmentFlag.AlignVCenter
555
580
  )
556
581
  self.coordY_doubleSpinBox.setDecimals(3)
557
582
  self.coordY_doubleSpinBox.setObjectName("coordY_doubleSpinBox")
558
583
  self.pixnumZ_doubleSpinBox = QtWidgets.QDoubleSpinBox(self.mainimagedata_groupBox)
559
584
  self.pixnumZ_doubleSpinBox.setGeometry(QtCore.QRect(30, 80, 67, 24))
560
585
  self.pixnumZ_doubleSpinBox.setAlignment(
561
- QtCore.Qt.AlignRight | QtCore.Qt.AlignTrailing | QtCore.Qt.AlignVCenter
586
+ QtCore.Qt.Qt.AlignmentFlag.AlignRight
587
+ | QtCore.Qt.Qt.AlignmentFlag.AlignTrailing
588
+ | QtCore.Qt.Qt.AlignmentFlag.AlignVCenter
562
589
  )
563
590
  self.pixnumZ_doubleSpinBox.setDecimals(0)
564
591
  self.pixnumZ_doubleSpinBox.setObjectName("pixnumZ_doubleSpinBox")
565
592
  self.coordZ_doubleSpinBox = QtWidgets.QDoubleSpinBox(self.mainimagedata_groupBox)
566
593
  self.coordZ_doubleSpinBox.setGeometry(QtCore.QRect(100, 80, 67, 24))
567
594
  self.coordZ_doubleSpinBox.setAlignment(
568
- QtCore.Qt.AlignRight | QtCore.Qt.AlignTrailing | QtCore.Qt.AlignVCenter
595
+ QtCore.Qt.Qt.AlignmentFlag.AlignRight
596
+ | QtCore.Qt.Qt.AlignmentFlag.AlignTrailing
597
+ | QtCore.Qt.Qt.AlignmentFlag.AlignVCenter
569
598
  )
570
599
  self.coordZ_doubleSpinBox.setDecimals(3)
571
600
  self.coordZ_doubleSpinBox.setObjectName("coordZ_doubleSpinBox")
@@ -578,14 +607,18 @@ class Ui_MainWindow(object):
578
607
  self.coordT_doubleSpinBox = QtWidgets.QDoubleSpinBox(self.mainimagedata_groupBox)
579
608
  self.coordT_doubleSpinBox.setGeometry(QtCore.QRect(100, 130, 67, 24))
580
609
  self.coordT_doubleSpinBox.setAlignment(
581
- QtCore.Qt.AlignRight | QtCore.Qt.AlignTrailing | QtCore.Qt.AlignVCenter
610
+ QtCore.Qt.Qt.AlignmentFlag.AlignRight
611
+ | QtCore.Qt.Qt.AlignmentFlag.AlignTrailing
612
+ | QtCore.Qt.Qt.AlignmentFlag.AlignVCenter
582
613
  )
583
614
  self.coordT_doubleSpinBox.setDecimals(3)
584
615
  self.coordT_doubleSpinBox.setObjectName("coordT_doubleSpinBox")
585
616
  self.pixnumT_doubleSpinBox = QtWidgets.QDoubleSpinBox(self.mainimagedata_groupBox)
586
617
  self.pixnumT_doubleSpinBox.setGeometry(QtCore.QRect(30, 130, 67, 24))
587
618
  self.pixnumT_doubleSpinBox.setAlignment(
588
- QtCore.Qt.AlignRight | QtCore.Qt.AlignTrailing | QtCore.Qt.AlignVCenter
619
+ QtCore.Qt.Qt.AlignmentFlag.AlignRight
620
+ | QtCore.Qt.Qt.AlignmentFlag.AlignTrailing
621
+ | QtCore.Qt.Qt.AlignmentFlag.AlignVCenter
589
622
  )
590
623
  self.pixnumT_doubleSpinBox.setDecimals(0)
591
624
  self.pixnumT_doubleSpinBox.setObjectName("pixnumT_doubleSpinBox")
@@ -594,7 +627,7 @@ class Ui_MainWindow(object):
594
627
  self.label_3.setObjectName("label_3")
595
628
  self.TimeSlider = QtWidgets.QSlider(self.mainimagedata_groupBox)
596
629
  self.TimeSlider.setGeometry(QtCore.QRect(10, 195, 151, 22))
597
- self.TimeSlider.setOrientation(QtCore.Qt.Horizontal)
630
+ self.TimeSlider.setOrientation(QtCore.Qt.Qt.Orientation.Horizontal)
598
631
  self.TimeSlider.setObjectName("TimeSlider")
599
632
  self.label_10 = QtWidgets.QLabel(self.mainimagedata_groupBox)
600
633
  self.label_10.setGeometry(QtCore.QRect(30, 120, 56, 13))
@@ -716,14 +749,14 @@ class Ui_MainWindow(object):
716
749
  font = QtGui.QFont()
717
750
  font.setFamily("Arial Narrow")
718
751
  self.label_5.setFont(font)
719
- self.label_5.setAlignment(QtCore.Qt.AlignCenter)
752
+ self.label_5.setAlignment(QtCore.Qt.Qt.AlignmentFlag.AlignCenter)
720
753
  self.label_5.setObjectName("label_5")
721
754
  self.label_12 = QtWidgets.QLabel(self.regressor_groupBox)
722
755
  self.label_12.setGeometry(QtCore.QRect(900, 155, 131, 16))
723
756
  font = QtGui.QFont()
724
757
  font.setFamily("Arial Narrow")
725
758
  self.label_12.setFont(font)
726
- self.label_12.setAlignment(QtCore.Qt.AlignCenter)
759
+ self.label_12.setAlignment(QtCore.Qt.Qt.AlignmentFlag.AlignCenter)
727
760
  self.label_12.setObjectName("label_12")
728
761
  self.logOutput_groupBox = QtWidgets.QGroupBox(self.centralwidget)
729
762
  self.logOutput_groupBox.setGeometry(QtCore.QRect(980, 5, 381, 221))
@@ -743,7 +776,9 @@ class Ui_MainWindow(object):
743
776
  self.logOutput = QtWidgets.QTextEdit(self.logOutput_groupBox)
744
777
  self.logOutput.setGeometry(QtCore.QRect(10, 25, 361, 186))
745
778
  font = QtGui.QFont()
746
- font.setFamily("Courier")
779
+ font.setFamily("Courier New")
780
+ font.setPointSize(11)
781
+ font.setBold(True)
747
782
  self.logOutput.setFont(font)
748
783
  self.logOutput.setObjectName("logOutput")
749
784
  self.simfunc_groupBox = QtWidgets.QGroupBox(self.centralwidget)
@@ -782,7 +817,7 @@ class Ui_MainWindow(object):
782
817
  self.simfunc_groupBox.raise_()
783
818
  MainWindow.setCentralWidget(self.centralwidget)
784
819
  self.menubar = QtWidgets.QMenuBar(MainWindow)
785
- self.menubar.setGeometry(QtCore.QRect(0, 0, 1373, 22))
820
+ self.menubar.setGeometry(QtCore.QRect(0, 0, 1375, 24))
786
821
  self.menubar.setObjectName("menubar")
787
822
  MainWindow.setMenuBar(self.menubar)
788
823
  self.statusbar = QtWidgets.QStatusBar(MainWindow)
@@ -840,7 +875,7 @@ class Ui_MainWindow(object):
840
875
  self.raw_radioButton.setText(_translate("MainWindow", "Raw data"))
841
876
  self.mean_radioButton.setText(_translate("MainWindow", "Mean"))
842
877
  self.median_radioButton.setText(_translate("MainWindow", "Median"))
843
- self.robustmean_radioButton.setText(_translate("MainWindow", "Robust mean"))
878
+ self.CoV_radioButton.setText(_translate("MainWindow", "CoV"))
844
879
  self.std_radioButton.setText(_translate("MainWindow", "Std dev"))
845
880
  self.MAD_radioButton.setText(_translate("MainWindow", "MAD"))
846
881
  self.overlays_groupBox.setTitle(_translate("MainWindow", "Overlays"))