py-neuromodulation 0.0.2__py3-none-any.whl → 0.0.3__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- docs/build/_downloads/09df217f95985497f45d69e2d4bdc5b1/plot_2_example_add_feature.py +68 -0
- docs/build/_downloads/3b4900a2b2818ff30362215b76f7d5eb/plot_1_example_BIDS.py +233 -0
- docs/build/_downloads/7e92dd2e6cc86b239d14cafad972ae4f/plot_3_example_sharpwave_analysis.py +219 -0
- docs/build/_downloads/c2db0bf2b334d541b00662b991682256/plot_6_real_time_demo.py +97 -0
- docs/build/_downloads/ce3914826f782cbd1ea8fd024eaf0ac3/plot_5_example_rmap_computing.py +64 -0
- docs/build/_downloads/da36848a41e6a3235d91fb7cfb6d59b4/plot_0_first_demo.py +192 -0
- docs/build/_downloads/eaa4305c75b19a1e2eea941f742a6331/plot_4_example_gridPointProjection.py +210 -0
- docs/build/html/_downloads/09df217f95985497f45d69e2d4bdc5b1/plot_2_example_add_feature.py +68 -0
- docs/build/html/_downloads/3b4900a2b2818ff30362215b76f7d5eb/plot_1_example_BIDS.py +239 -0
- docs/build/html/_downloads/7e92dd2e6cc86b239d14cafad972ae4f/plot_3_example_sharpwave_analysis.py +219 -0
- docs/build/html/_downloads/c2db0bf2b334d541b00662b991682256/plot_6_real_time_demo.py +97 -0
- docs/build/html/_downloads/ce3914826f782cbd1ea8fd024eaf0ac3/plot_5_example_rmap_computing.py +64 -0
- docs/build/html/_downloads/da36848a41e6a3235d91fb7cfb6d59b4/plot_0_first_demo.py +192 -0
- docs/build/html/_downloads/eaa4305c75b19a1e2eea941f742a6331/plot_4_example_gridPointProjection.py +210 -0
- docs/source/_build/html/_downloads/09df217f95985497f45d69e2d4bdc5b1/plot_2_example_add_feature.py +76 -0
- docs/source/_build/html/_downloads/0d0d0a76e8f648d5d3cbc47da6351932/plot_real_time_demo.py +97 -0
- docs/source/_build/html/_downloads/3b4900a2b2818ff30362215b76f7d5eb/plot_1_example_BIDS.py +240 -0
- docs/source/_build/html/_downloads/5d73cadc59a8805c47e3b84063afc157/plot_example_BIDS.py +233 -0
- docs/source/_build/html/_downloads/7660317fa5a6bfbd12fcca9961457fc4/plot_example_rmap_computing.py +63 -0
- docs/source/_build/html/_downloads/7e92dd2e6cc86b239d14cafad972ae4f/plot_3_example_sharpwave_analysis.py +219 -0
- docs/source/_build/html/_downloads/839e5b319379f7fd9e867deb00fd797f/plot_example_gridPointProjection.py +210 -0
- docs/source/_build/html/_downloads/ae8be19afe5e559f011fc9b138968ba0/plot_first_demo.py +192 -0
- docs/source/_build/html/_downloads/b8b06cacc17969d3725a0b6f1d7741c5/plot_example_sharpwave_analysis.py +219 -0
- docs/source/_build/html/_downloads/c2db0bf2b334d541b00662b991682256/plot_6_real_time_demo.py +121 -0
- docs/source/_build/html/_downloads/c31a86c0b68cb4167d968091ace8080d/plot_example_add_feature.py +68 -0
- docs/source/_build/html/_downloads/ce3914826f782cbd1ea8fd024eaf0ac3/plot_5_example_rmap_computing.py +64 -0
- docs/source/_build/html/_downloads/da36848a41e6a3235d91fb7cfb6d59b4/plot_0_first_demo.py +189 -0
- docs/source/_build/html/_downloads/eaa4305c75b19a1e2eea941f742a6331/plot_4_example_gridPointProjection.py +210 -0
- docs/source/auto_examples/plot_0_first_demo.py +189 -0
- docs/source/auto_examples/plot_1_example_BIDS.py +240 -0
- docs/source/auto_examples/plot_2_example_add_feature.py +76 -0
- docs/source/auto_examples/plot_3_example_sharpwave_analysis.py +219 -0
- docs/source/auto_examples/plot_4_example_gridPointProjection.py +210 -0
- docs/source/auto_examples/plot_5_example_rmap_computing.py +64 -0
- docs/source/auto_examples/plot_6_real_time_demo.py +121 -0
- docs/source/conf.py +105 -0
- examples/plot_0_first_demo.py +189 -0
- examples/plot_1_example_BIDS.py +240 -0
- examples/plot_2_example_add_feature.py +76 -0
- examples/plot_3_example_sharpwave_analysis.py +219 -0
- examples/plot_4_example_gridPointProjection.py +210 -0
- examples/plot_5_example_rmap_computing.py +64 -0
- examples/plot_6_real_time_demo.py +121 -0
- packages/realtime_decoding/build/lib/realtime_decoding/__init__.py +4 -0
- packages/realtime_decoding/build/lib/realtime_decoding/decoder.py +104 -0
- packages/realtime_decoding/build/lib/realtime_decoding/features.py +163 -0
- packages/realtime_decoding/build/lib/realtime_decoding/helpers.py +15 -0
- packages/realtime_decoding/build/lib/realtime_decoding/run_decoding.py +345 -0
- packages/realtime_decoding/build/lib/realtime_decoding/trainer.py +54 -0
- packages/tmsi/build/lib/TMSiFileFormats/__init__.py +37 -0
- packages/tmsi/build/lib/TMSiFileFormats/file_formats/__init__.py +36 -0
- packages/tmsi/build/lib/TMSiFileFormats/file_formats/lsl_stream_writer.py +200 -0
- packages/tmsi/build/lib/TMSiFileFormats/file_formats/poly5_file_writer.py +496 -0
- packages/tmsi/build/lib/TMSiFileFormats/file_formats/poly5_to_edf_converter.py +236 -0
- packages/tmsi/build/lib/TMSiFileFormats/file_formats/xdf_file_writer.py +977 -0
- packages/tmsi/build/lib/TMSiFileFormats/file_readers/__init__.py +35 -0
- packages/tmsi/build/lib/TMSiFileFormats/file_readers/edf_reader.py +116 -0
- packages/tmsi/build/lib/TMSiFileFormats/file_readers/poly5reader.py +294 -0
- packages/tmsi/build/lib/TMSiFileFormats/file_readers/xdf_reader.py +229 -0
- packages/tmsi/build/lib/TMSiFileFormats/file_writer.py +102 -0
- packages/tmsi/build/lib/TMSiPlotters/__init__.py +2 -0
- packages/tmsi/build/lib/TMSiPlotters/gui/__init__.py +39 -0
- packages/tmsi/build/lib/TMSiPlotters/gui/_plotter_gui.py +234 -0
- packages/tmsi/build/lib/TMSiPlotters/gui/plotting_gui.py +440 -0
- packages/tmsi/build/lib/TMSiPlotters/plotters/__init__.py +44 -0
- packages/tmsi/build/lib/TMSiPlotters/plotters/hd_emg_plotter.py +446 -0
- packages/tmsi/build/lib/TMSiPlotters/plotters/impedance_plotter.py +589 -0
- packages/tmsi/build/lib/TMSiPlotters/plotters/signal_plotter.py +1326 -0
- packages/tmsi/build/lib/TMSiSDK/__init__.py +54 -0
- packages/tmsi/build/lib/TMSiSDK/device.py +588 -0
- packages/tmsi/build/lib/TMSiSDK/devices/__init__.py +34 -0
- packages/tmsi/build/lib/TMSiSDK/devices/saga/TMSi_Device_API.py +1764 -0
- packages/tmsi/build/lib/TMSiSDK/devices/saga/__init__.py +34 -0
- packages/tmsi/build/lib/TMSiSDK/devices/saga/saga_device.py +1366 -0
- packages/tmsi/build/lib/TMSiSDK/devices/saga/saga_types.py +520 -0
- packages/tmsi/build/lib/TMSiSDK/devices/saga/xml_saga_config.py +165 -0
- packages/tmsi/build/lib/TMSiSDK/error.py +95 -0
- packages/tmsi/build/lib/TMSiSDK/sample_data.py +63 -0
- packages/tmsi/build/lib/TMSiSDK/sample_data_server.py +99 -0
- packages/tmsi/build/lib/TMSiSDK/settings.py +45 -0
- packages/tmsi/build/lib/TMSiSDK/tmsi_device.py +111 -0
- packages/tmsi/build/lib/__init__.py +4 -0
- packages/tmsi/build/lib/apex_sdk/__init__.py +34 -0
- packages/tmsi/build/lib/apex_sdk/device/__init__.py +41 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/apex_API.py +1009 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/apex_API_enums.py +239 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/apex_API_structures.py +668 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/apex_device.py +1611 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/apex_dongle.py +38 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/apex_event_reader.py +57 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/apex_structures/apex_channel.py +44 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/apex_structures/apex_config.py +150 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/apex_structures/apex_const.py +36 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/apex_structures/apex_impedance_channel.py +48 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/apex_structures/apex_info.py +108 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/apex_structures/dongle_info.py +39 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/measurements/download_measurement.py +77 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/measurements/eeg_measurement.py +150 -0
- packages/tmsi/build/lib/apex_sdk/device/devices/apex/measurements/impedance_measurement.py +129 -0
- packages/tmsi/build/lib/apex_sdk/device/threads/conversion_thread.py +59 -0
- packages/tmsi/build/lib/apex_sdk/device/threads/sampling_thread.py +57 -0
- packages/tmsi/build/lib/apex_sdk/device/tmsi_channel.py +83 -0
- packages/tmsi/build/lib/apex_sdk/device/tmsi_device.py +201 -0
- packages/tmsi/build/lib/apex_sdk/device/tmsi_device_enums.py +103 -0
- packages/tmsi/build/lib/apex_sdk/device/tmsi_dongle.py +43 -0
- packages/tmsi/build/lib/apex_sdk/device/tmsi_event_reader.py +50 -0
- packages/tmsi/build/lib/apex_sdk/device/tmsi_measurement.py +118 -0
- packages/tmsi/build/lib/apex_sdk/sample_data_server/__init__.py +33 -0
- packages/tmsi/build/lib/apex_sdk/sample_data_server/event_data.py +44 -0
- packages/tmsi/build/lib/apex_sdk/sample_data_server/sample_data.py +50 -0
- packages/tmsi/build/lib/apex_sdk/sample_data_server/sample_data_server.py +136 -0
- packages/tmsi/build/lib/apex_sdk/tmsi_errors/error.py +126 -0
- packages/tmsi/build/lib/apex_sdk/tmsi_sdk.py +113 -0
- packages/tmsi/build/lib/apex_sdk/tmsi_utilities/apex/apex_structure_generator.py +134 -0
- packages/tmsi/build/lib/apex_sdk/tmsi_utilities/decorators.py +60 -0
- packages/tmsi/build/lib/apex_sdk/tmsi_utilities/logger_filter.py +42 -0
- packages/tmsi/build/lib/apex_sdk/tmsi_utilities/singleton.py +42 -0
- packages/tmsi/build/lib/apex_sdk/tmsi_utilities/support_functions.py +72 -0
- packages/tmsi/build/lib/apex_sdk/tmsi_utilities/tmsi_logger.py +98 -0
- py_neuromodulation/{helper.py → _write_example_dataset_helper.py} +1 -1
- py_neuromodulation/nm_EpochStream.py +2 -3
- py_neuromodulation/nm_IO.py +43 -70
- py_neuromodulation/nm_RMAP.py +308 -11
- py_neuromodulation/nm_analysis.py +1 -1
- py_neuromodulation/nm_artifacts.py +25 -0
- py_neuromodulation/nm_bispectra.py +64 -29
- py_neuromodulation/nm_bursts.py +44 -30
- py_neuromodulation/nm_coherence.py +2 -1
- py_neuromodulation/nm_features.py +4 -2
- py_neuromodulation/nm_filter.py +63 -32
- py_neuromodulation/nm_filter_preprocessing.py +91 -0
- py_neuromodulation/nm_fooof.py +47 -29
- py_neuromodulation/nm_mne_connectivity.py +1 -1
- py_neuromodulation/nm_normalization.py +50 -74
- py_neuromodulation/nm_oscillatory.py +151 -31
- py_neuromodulation/nm_plots.py +13 -10
- py_neuromodulation/nm_rereference.py +10 -8
- py_neuromodulation/nm_run_analysis.py +28 -13
- py_neuromodulation/nm_sharpwaves.py +103 -136
- py_neuromodulation/nm_stats.py +44 -30
- py_neuromodulation/nm_stream_abc.py +18 -10
- py_neuromodulation/nm_stream_offline.py +181 -40
- py_neuromodulation/utils/_logging.py +24 -0
- {py_neuromodulation-0.0.2.dist-info → py_neuromodulation-0.0.3.dist-info}/METADATA +182 -142
- py_neuromodulation-0.0.3.dist-info/RECORD +188 -0
- {py_neuromodulation-0.0.2.dist-info → py_neuromodulation-0.0.3.dist-info}/WHEEL +2 -1
- py_neuromodulation-0.0.3.dist-info/top_level.txt +5 -0
- tests/__init__.py +0 -0
- tests/conftest.py +117 -0
- tests/test_all_examples.py +10 -0
- tests/test_all_features.py +63 -0
- tests/test_bispectra.py +70 -0
- tests/test_bursts.py +105 -0
- tests/test_feature_sampling_rates.py +143 -0
- tests/test_fooof.py +16 -0
- tests/test_initalization_offline_stream.py +41 -0
- tests/test_multiprocessing.py +58 -0
- tests/test_nan_values.py +29 -0
- tests/test_nm_filter.py +95 -0
- tests/test_nm_resample.py +63 -0
- tests/test_normalization_settings.py +146 -0
- tests/test_notch_filter.py +31 -0
- tests/test_osc_features.py +424 -0
- tests/test_preprocessing_filter.py +151 -0
- tests/test_rereference.py +171 -0
- tests/test_sampling.py +57 -0
- tests/test_settings_change_after_init.py +76 -0
- tests/test_sharpwave.py +165 -0
- tests/test_target_channel_add.py +100 -0
- tests/test_timing.py +80 -0
- py_neuromodulation/data/README +0 -6
- py_neuromodulation/data/dataset_description.json +0 -8
- py_neuromodulation/data/derivatives/sub-testsub_ses-EphysMedOff_task-gripforce_run-0/MOV_aligned_features_ch_ECOG_RIGHT_0_all.png +0 -0
- py_neuromodulation/data/derivatives/sub-testsub_ses-EphysMedOff_task-gripforce_run-0/all_feature_plt.pdf +0 -0
- py_neuromodulation/data/derivatives/sub-testsub_ses-EphysMedOff_task-gripforce_run-0/sub-testsub_ses-EphysMedOff_task-gripforce_run-0_FEATURES.csv +0 -182
- py_neuromodulation/data/derivatives/sub-testsub_ses-EphysMedOff_task-gripforce_run-0/sub-testsub_ses-EphysMedOff_task-gripforce_run-0_LM_ML_RES.p +0 -0
- py_neuromodulation/data/derivatives/sub-testsub_ses-EphysMedOff_task-gripforce_run-0/sub-testsub_ses-EphysMedOff_task-gripforce_run-0_SETTINGS.json +0 -273
- py_neuromodulation/data/derivatives/sub-testsub_ses-EphysMedOff_task-gripforce_run-0/sub-testsub_ses-EphysMedOff_task-gripforce_run-0_SIDECAR.json +0 -6
- py_neuromodulation/data/derivatives/sub-testsub_ses-EphysMedOff_task-gripforce_run-0/sub-testsub_ses-EphysMedOff_task-gripforce_run-0_decoding_performance.png +0 -0
- py_neuromodulation/data/derivatives/sub-testsub_ses-EphysMedOff_task-gripforce_run-0/sub-testsub_ses-EphysMedOff_task-gripforce_run-0_nm_channels.csv +0 -11
- py_neuromodulation/data/participants.json +0 -32
- py_neuromodulation/data/participants.tsv +0 -2
- py_neuromodulation/data/sub-testsub/ses-EphysMedOff/ieeg/sub-testsub_ses-EphysMedOff_space-mni_coordsystem.json +0 -5
- py_neuromodulation/data/sub-testsub/ses-EphysMedOff/ieeg/sub-testsub_ses-EphysMedOff_space-mni_electrodes.tsv +0 -11
- py_neuromodulation/data/sub-testsub/ses-EphysMedOff/ieeg/sub-testsub_ses-EphysMedOff_task-gripforce_run-0_channels.tsv +0 -11
- py_neuromodulation/data/sub-testsub/ses-EphysMedOff/ieeg/sub-testsub_ses-EphysMedOff_task-gripforce_run-0_ieeg.eeg +0 -0
- py_neuromodulation/data/sub-testsub/ses-EphysMedOff/ieeg/sub-testsub_ses-EphysMedOff_task-gripforce_run-0_ieeg.json +0 -18
- py_neuromodulation/data/sub-testsub/ses-EphysMedOff/ieeg/sub-testsub_ses-EphysMedOff_task-gripforce_run-0_ieeg.vhdr +0 -35
- py_neuromodulation/data/sub-testsub/ses-EphysMedOff/ieeg/sub-testsub_ses-EphysMedOff_task-gripforce_run-0_ieeg.vmrk +0 -13
- py_neuromodulation/data/sub-testsub/ses-EphysMedOff/sub-testsub_ses-EphysMedOff_scans.tsv +0 -2
- py_neuromodulation/grid_cortex.tsv +0 -40
- py_neuromodulation/grid_subcortex.tsv +0 -1429
- py_neuromodulation/nm_settings.json +0 -290
- py_neuromodulation/plots/STN_surf.mat +0 -0
- py_neuromodulation/plots/Vertices.mat +0 -0
- py_neuromodulation/plots/faces.mat +0 -0
- py_neuromodulation/plots/grid.mat +0 -0
- py_neuromodulation/py_neuromodulation.egg-info/PKG-INFO +0 -104
- py_neuromodulation/py_neuromodulation.egg-info/dependency_links.txt +0 -1
- py_neuromodulation/py_neuromodulation.egg-info/requires.txt +0 -26
- py_neuromodulation/py_neuromodulation.egg-info/top_level.txt +0 -1
- py_neuromodulation-0.0.2.dist-info/RECORD +0 -73
- /py_neuromodulation/{py_neuromodulation.egg-info/SOURCES.txt → utils/__init__.py} +0 -0
- {py_neuromodulation-0.0.2.dist-info → py_neuromodulation-0.0.3.dist-info}/LICENSE +0 -0
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(c) 2022 Twente Medical Systems International B.V., Oldenzaal The Netherlands
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Licensed under the Apache License, Version 2.0 (the "License");
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distributed under the License is distributed on an "AS IS" BASIS,
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WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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