partis-bcr 1.0.5__py3-none-any.whl → 1.0.7__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (139) hide show
  1. bin/partis-test.py +4 -1
  2. packages/ham/bcrham +0 -0
  3. {partis_bcr-1.0.5.data → partis_bcr-1.0.7.data}/scripts/partis-test.py +4 -1
  4. {partis_bcr-1.0.5.dist-info → partis_bcr-1.0.7.dist-info}/METADATA +2 -1
  5. {partis_bcr-1.0.5.dist-info → partis_bcr-1.0.7.dist-info}/RECORD +98 -139
  6. python/utils.py +1 -1
  7. test/new-results/test/parameters/simu/hmm/all-mean-mute-freqs.csv +3 -3
  8. test/new-results/test/parameters/simu/hmm/all-mean-n-muted.csv +11 -11
  9. test/new-results/test/parameters/simu/hmm/all-probs.csv +3 -13
  10. test/new-results/test/parameters/simu/hmm/cluster_size.csv +1 -1
  11. test/new-results/test/parameters/simu/hmm/d-mean-mute-freqs.csv +6 -6
  12. test/new-results/test/parameters/simu/hmm/d-mean-n-muted.csv +3 -3
  13. test/new-results/test/parameters/simu/hmm/d_gene-d_3p_del-probs.csv +1 -6
  14. test/new-results/test/parameters/simu/hmm/d_gene-d_5p_del-probs.csv +2 -9
  15. test/new-results/test/parameters/simu/hmm/d_gene-probs.csv +1 -5
  16. test/new-results/test/parameters/simu/hmm/d_gene-vd_insertion-probs.csv +2 -10
  17. test/new-results/test/parameters/simu/hmm/dj_insertion_content.csv +4 -4
  18. test/new-results/test/parameters/simu/hmm/fv_insertion-probs.csv +2 -3
  19. test/new-results/test/parameters/simu/hmm/germline-sets/igh/extras.csv +0 -6
  20. test/new-results/test/parameters/simu/hmm/germline-sets/igh/ighd.fasta +0 -8
  21. test/new-results/test/parameters/simu/hmm/germline-sets/igh/ighj.fasta +0 -2
  22. test/new-results/test/parameters/simu/hmm/germline-sets/igh/ighv.fasta +0 -10
  23. test/new-results/test/parameters/simu/hmm/hmms/IGHD6-13_star_01.yaml +268 -267
  24. test/new-results/test/parameters/simu/hmm/hmms/IGHJ4_star_02.yaml +306 -306
  25. test/new-results/test/parameters/simu/hmm/hmms/IGHJ6_star_02.yaml +284 -284
  26. test/new-results/test/parameters/simu/hmm/hmms/IGHV3-66_star_02.yaml +1191 -1191
  27. test/new-results/test/parameters/simu/hmm/hmms/IGHV3-7_star_05.yaml +2 -2
  28. test/new-results/test/parameters/simu/hmm/j-mean-mute-freqs.csv +5 -5
  29. test/new-results/test/parameters/simu/hmm/j-mean-n-muted.csv +4 -4
  30. test/new-results/test/parameters/simu/hmm/j_gene-dj_insertion-probs.csv +2 -9
  31. test/new-results/test/parameters/simu/hmm/j_gene-j_3p_del-probs.csv +1 -2
  32. test/new-results/test/parameters/simu/hmm/j_gene-j_5p_del-probs.csv +2 -7
  33. test/new-results/test/parameters/simu/hmm/j_gene-probs.csv +1 -2
  34. test/new-results/test/parameters/simu/hmm/jf_insertion-probs.csv +1 -1
  35. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHD6-13_star_01.csv +13 -16
  36. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHJ4_star_02.csv +40 -44
  37. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHJ6_star_02.csv +0 -2
  38. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHV3-66_star_02.csv +291 -293
  39. test/new-results/test/parameters/simu/hmm/seq_content.csv +4 -4
  40. test/new-results/test/parameters/simu/hmm/v-mean-mute-freqs.csv +3 -3
  41. test/new-results/test/parameters/simu/hmm/v-mean-n-muted.csv +7 -7
  42. test/new-results/test/parameters/simu/hmm/v_gene-probs.csv +1 -6
  43. test/new-results/test/parameters/simu/hmm/v_gene-v_3p_del-probs.csv +1 -7
  44. test/new-results/test/parameters/simu/hmm/v_gene-v_5p_del-probs.csv +1 -6
  45. test/new-results/test/parameters/simu/hmm/vd_insertion_content.csv +4 -4
  46. test/new-results/test/parameters/simu/sw/all-mean-mute-freqs.csv +3 -3
  47. test/new-results/test/parameters/simu/sw/all-mean-n-muted.csv +8 -8
  48. test/new-results/test/parameters/simu/sw/all-probs.csv +1 -9
  49. test/new-results/test/parameters/simu/sw/cluster_size.csv +1 -1
  50. test/new-results/test/parameters/simu/sw/d-mean-mute-freqs.csv +5 -5
  51. test/new-results/test/parameters/simu/sw/d-mean-n-muted.csv +3 -3
  52. test/new-results/test/parameters/simu/sw/d_gene-d_3p_del-probs.csv +1 -7
  53. test/new-results/test/parameters/simu/sw/d_gene-d_5p_del-probs.csv +1 -7
  54. test/new-results/test/parameters/simu/sw/d_gene-probs.csv +1 -5
  55. test/new-results/test/parameters/simu/sw/d_gene-vd_insertion-probs.csv +1 -8
  56. test/new-results/test/parameters/simu/sw/dj_insertion_content.csv +4 -4
  57. test/new-results/test/parameters/simu/sw/fv_insertion-probs.csv +1 -1
  58. test/new-results/test/parameters/simu/sw/germline-sets/igh/extras.csv +0 -6
  59. test/new-results/test/parameters/simu/sw/germline-sets/igh/ighd.fasta +0 -8
  60. test/new-results/test/parameters/simu/sw/germline-sets/igh/ighj.fasta +0 -2
  61. test/new-results/test/parameters/simu/sw/germline-sets/igh/ighv.fasta +0 -10
  62. test/new-results/test/parameters/simu/sw/hmms/IGHD6-13_star_01.yaml +268 -267
  63. test/new-results/test/parameters/simu/sw/hmms/IGHJ4_star_02.yaml +306 -306
  64. test/new-results/test/parameters/simu/sw/hmms/IGHJ6_star_02.yaml +22 -22
  65. test/new-results/test/parameters/simu/sw/hmms/IGHV3-66_star_02.yaml +1191 -1191
  66. test/new-results/test/parameters/simu/sw/hmms/IGHV3-7_star_05.yaml +2 -2
  67. test/new-results/test/parameters/simu/sw/j-mean-mute-freqs.csv +4 -4
  68. test/new-results/test/parameters/simu/sw/j-mean-n-muted.csv +3 -3
  69. test/new-results/test/parameters/simu/sw/j_gene-dj_insertion-probs.csv +1 -7
  70. test/new-results/test/parameters/simu/sw/j_gene-j_3p_del-probs.csv +1 -2
  71. test/new-results/test/parameters/simu/sw/j_gene-j_5p_del-probs.csv +1 -7
  72. test/new-results/test/parameters/simu/sw/j_gene-probs.csv +1 -2
  73. test/new-results/test/parameters/simu/sw/jf_insertion-probs.csv +1 -1
  74. test/new-results/test/parameters/simu/sw/mute-freqs/IGHD6-13_star_01.csv +13 -16
  75. test/new-results/test/parameters/simu/sw/mute-freqs/IGHJ4_star_02.csv +40 -48
  76. test/new-results/test/parameters/simu/sw/mute-freqs/IGHV3-66_star_02.csv +291 -293
  77. test/new-results/test/parameters/simu/sw/seq_content.csv +4 -4
  78. test/new-results/test/parameters/simu/sw/v-mean-mute-freqs.csv +3 -3
  79. test/new-results/test/parameters/simu/sw/v-mean-n-muted.csv +7 -7
  80. test/new-results/test/parameters/simu/sw/v_gene-probs.csv +1 -6
  81. test/new-results/test/parameters/simu/sw/v_gene-v_3p_del-probs.csv +1 -7
  82. test/new-results/test/parameters/simu/sw/v_gene-v_5p_del-probs.csv +1 -6
  83. test/new-results/test/parameters/simu/sw/vd_insertion_content.csv +4 -4
  84. test/new-results/test/parameters/simu/sw-cache.yaml +1 -1
  85. test/new-results/test.log +24 -258
  86. test/test.py +4 -1
  87. bin/partis-pip +0 -116
  88. test/new-results/test/parameters/simu/hmm/hmms/IGHD1-20_star_01.yaml +0 -449
  89. test/new-results/test/parameters/simu/hmm/hmms/IGHD3-16_star_02.yaml +0 -870
  90. test/new-results/test/parameters/simu/hmm/hmms/IGHD3-22_star_01.yaml +0 -744
  91. test/new-results/test/parameters/simu/hmm/hmms/IGHD6-19_star_01.yaml +0 -534
  92. test/new-results/test/parameters/simu/hmm/hmms/IGHJ1_star_01.yaml +0 -986
  93. test/new-results/test/parameters/simu/hmm/hmms/IGHV1-18_star_01.yaml +0 -4484
  94. test/new-results/test/parameters/simu/hmm/hmms/IGHV3-23_star_01.yaml +0 -4484
  95. test/new-results/test/parameters/simu/hmm/hmms/IGHV4-4_star_09.yaml +0 -4438
  96. test/new-results/test/parameters/simu/hmm/hmms/IGHV4-61_star_01.yaml +0 -4529
  97. test/new-results/test/parameters/simu/hmm/hmms/IGHV5-51_star_01.yaml +0 -4484
  98. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHD1-20_star_01.csv +0 -9
  99. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHD3-16_star_02.csv +0 -30
  100. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHD3-22_star_01.csv +0 -32
  101. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHD6-19_star_01.csv +0 -22
  102. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHJ1_star_01.csv +0 -50
  103. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHV1-18_star_01.csv +0 -297
  104. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHV3-23_star_01.csv +0 -297
  105. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHV4-4_star_09.csv +0 -291
  106. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHV4-61_star_01.csv +0 -300
  107. test/new-results/test/parameters/simu/hmm/mute-freqs/IGHV5-51_star_01.csv +0 -296
  108. test/new-results/test/parameters/simu/sw/hmms/IGHD1-20_star_01.yaml +0 -449
  109. test/new-results/test/parameters/simu/sw/hmms/IGHD3-16_star_02.yaml +0 -870
  110. test/new-results/test/parameters/simu/sw/hmms/IGHD3-22_star_01.yaml +0 -744
  111. test/new-results/test/parameters/simu/sw/hmms/IGHD6-19_star_01.yaml +0 -534
  112. test/new-results/test/parameters/simu/sw/hmms/IGHJ1_star_01.yaml +0 -986
  113. test/new-results/test/parameters/simu/sw/hmms/IGHV1-18_star_01.yaml +0 -4484
  114. test/new-results/test/parameters/simu/sw/hmms/IGHV3-23_star_01.yaml +0 -4484
  115. test/new-results/test/parameters/simu/sw/hmms/IGHV4-4_star_09.yaml +0 -4438
  116. test/new-results/test/parameters/simu/sw/hmms/IGHV4-61_star_01.yaml +0 -4529
  117. test/new-results/test/parameters/simu/sw/hmms/IGHV5-51_star_01.yaml +0 -4484
  118. test/new-results/test/parameters/simu/sw/mute-freqs/IGHD1-20_star_01.csv +0 -9
  119. test/new-results/test/parameters/simu/sw/mute-freqs/IGHD3-16_star_02.csv +0 -30
  120. test/new-results/test/parameters/simu/sw/mute-freqs/IGHD3-22_star_01.csv +0 -32
  121. test/new-results/test/parameters/simu/sw/mute-freqs/IGHD6-19_star_01.csv +0 -20
  122. test/new-results/test/parameters/simu/sw/mute-freqs/IGHJ1_star_01.csv +0 -50
  123. test/new-results/test/parameters/simu/sw/mute-freqs/IGHV1-18_star_01.csv +0 -297
  124. test/new-results/test/parameters/simu/sw/mute-freqs/IGHV3-23_star_01.csv +0 -297
  125. test/new-results/test/parameters/simu/sw/mute-freqs/IGHV4-4_star_09.csv +0 -291
  126. test/new-results/test/parameters/simu/sw/mute-freqs/IGHV4-61_star_01.csv +0 -300
  127. test/new-results/test/parameters/simu/sw/mute-freqs/IGHV5-51_star_01.csv +0 -296
  128. {partis_bcr-1.0.5.data → partis_bcr-1.0.7.data}/scripts/cf-alleles.py +0 -0
  129. {partis_bcr-1.0.5.data → partis_bcr-1.0.7.data}/scripts/cf-germlines.py +0 -0
  130. {partis_bcr-1.0.5.data → partis_bcr-1.0.7.data}/scripts/compare-plotdirs.py +0 -0
  131. {partis_bcr-1.0.5.data → partis_bcr-1.0.7.data}/scripts/extract-pairing-info.py +0 -0
  132. {partis_bcr-1.0.5.data → partis_bcr-1.0.7.data}/scripts/gctree-run.py +0 -0
  133. {partis_bcr-1.0.5.data → partis_bcr-1.0.7.data}/scripts/get-naive-probabilities.py +0 -0
  134. {partis_bcr-1.0.5.data → partis_bcr-1.0.7.data}/scripts/parse-output.py +0 -0
  135. {partis_bcr-1.0.5.data → partis_bcr-1.0.7.data}/scripts/split-loci.py +0 -0
  136. {partis_bcr-1.0.5.dist-info → partis_bcr-1.0.7.dist-info}/WHEEL +0 -0
  137. {partis_bcr-1.0.5.dist-info → partis_bcr-1.0.7.dist-info}/entry_points.txt +0 -0
  138. {partis_bcr-1.0.5.dist-info → partis_bcr-1.0.7.dist-info}/licenses/COPYING +0 -0
  139. {partis_bcr-1.0.5.dist-info → partis_bcr-1.0.7.dist-info}/top_level.txt +0 -0
test/new-results/test/parameters/simu/sw/hmms/IGHJ1_star_01.yaml DELETED
@@ -1,986 +0,0 @@
1
- !!python/object:python.hmmwriter.HMM
2
- extras:
3
- gene_prob: 0.2222222222222222
4
- overall_mute_freq: 0.012222222222222223
5
- per_gene_mute_freq: 0.1071638342905726
6
- name: IGHJ1_star_01
7
- states:
8
- - !!python/object:python.hmmwriter.State
9
- emissions: null
10
- extras: {}
11
- name: init
12
- transitions:
13
- IGHJ1_star_01_0: 0.004419191919191919
14
- IGHJ1_star_01_1: 0.004419191919191919
15
- IGHJ1_star_01_10: 0.003928170594837261
16
- IGHJ1_star_01_11: 0.0034371492704826038
17
- IGHJ1_star_01_12: 0.0029461279461279453
18
- IGHJ1_star_01_13: 0.0024551066217732872
19
- IGHJ1_star_01_14: 0.0019640852974186296
20
- IGHJ1_star_01_15: 0.0014730639730639722
21
- IGHJ1_star_01_16: 0.0009820426487093146
22
- IGHJ1_star_01_17: 0.0004910213243546569
23
- IGHJ1_star_01_18: 0.004419191919191919
24
- IGHJ1_star_01_2: 0.004419191919191919
25
- IGHJ1_star_01_3: 0.030934343434343436
26
- IGHJ1_star_01_4: 0.026515151515151512
27
- IGHJ1_star_01_5: 0.022095959595959596
28
- IGHJ1_star_01_6: 0.017676767676767676
29
- IGHJ1_star_01_7: 0.013257575757575756
30
- IGHJ1_star_01_8: 0.00883838383838384
31
- IGHJ1_star_01_9: 0.004419191919191919
32
- insert_left_A: 0.11843790012804098
33
- insert_left_C: 0.3375480153649168
34
- insert_left_G: 0.13620358514724712
35
- insert_left_T: 0.24871959026888604
36
- - !!python/object:python.hmmwriter.State
37
- emissions:
38
- probs:
39
- A: 0.8928361657094274
40
- C: 0.03572127809685753
41
- G: 0.03572127809685753
42
- T: 0.03572127809685753
43
- track: nukes
44
- extras:
45
- ambiguous_char: N
46
- ambiguous_emission_prob: 0.25
47
- germline: A
48
- name: insert_left_A
49
- transitions:
50
- IGHJ1_star_01_0: 0.00793650793650794
51
- IGHJ1_star_01_1: 0.00793650793650794
52
- IGHJ1_star_01_10: 0.00705467372134039
53
- IGHJ1_star_01_11: 0.006172839506172841
54
- IGHJ1_star_01_12: 0.005291005291005292
55
- IGHJ1_star_01_13: 0.004409171075837742
56
- IGHJ1_star_01_14: 0.0035273368606701934
57
- IGHJ1_star_01_15: 0.002645502645502645
58
- IGHJ1_star_01_16: 0.0017636684303350963
59
- IGHJ1_star_01_17: 0.0008818342151675474
60
- IGHJ1_star_01_18: 0.00793650793650794
61
- IGHJ1_star_01_2: 0.00793650793650794
62
- IGHJ1_star_01_3: 0.05555555555555557
63
- IGHJ1_star_01_4: 0.04761904761904763
64
- IGHJ1_star_01_5: 0.039682539682539694
65
- IGHJ1_star_01_6: 0.03174603174603176
66
- IGHJ1_star_01_7: 0.023809523809523815
67
- IGHJ1_star_01_8: 0.015873015873015883
68
- IGHJ1_star_01_9: 0.00793650793650794
69
- insert_left_A: 0.10060362173038229
70
- insert_left_C: 0.28672032193158953
71
- insert_left_G: 0.11569416498993963
72
- insert_left_T: 0.21126760563380279
73
- - !!python/object:python.hmmwriter.State
74
- emissions:
75
- probs:
76
- A: 0.03572127809685753
77
- C: 0.8928361657094274
78
- G: 0.03572127809685753
79
- T: 0.03572127809685753
80
- track: nukes
81
- extras:
82
- ambiguous_char: N
83
- ambiguous_emission_prob: 0.25
84
- germline: C
85
- name: insert_left_C
86
- transitions:
87
- IGHJ1_star_01_0: 0.00793650793650794
88
- IGHJ1_star_01_1: 0.00793650793650794
89
- IGHJ1_star_01_10: 0.00705467372134039
90
- IGHJ1_star_01_11: 0.006172839506172841
91
- IGHJ1_star_01_12: 0.005291005291005292
92
- IGHJ1_star_01_13: 0.004409171075837742
93
- IGHJ1_star_01_14: 0.0035273368606701934
94
- IGHJ1_star_01_15: 0.002645502645502645
95
- IGHJ1_star_01_16: 0.0017636684303350963
96
- IGHJ1_star_01_17: 0.0008818342151675474
97
- IGHJ1_star_01_18: 0.00793650793650794
98
- IGHJ1_star_01_2: 0.00793650793650794
99
- IGHJ1_star_01_3: 0.05555555555555557
100
- IGHJ1_star_01_4: 0.04761904761904763
101
- IGHJ1_star_01_5: 0.039682539682539694
102
- IGHJ1_star_01_6: 0.03174603174603176
103
- IGHJ1_star_01_7: 0.023809523809523815
104
- IGHJ1_star_01_8: 0.015873015873015883
105
- IGHJ1_star_01_9: 0.00793650793650794
106
- insert_left_A: 0.10060362173038229
107
- insert_left_C: 0.28672032193158953
108
- insert_left_G: 0.11569416498993963
109
- insert_left_T: 0.21126760563380279
110
- - !!python/object:python.hmmwriter.State
111
- emissions:
112
- probs:
113
- A: 0.03572127809685753
114
- C: 0.03572127809685753
115
- G: 0.8928361657094274
116
- T: 0.03572127809685753
117
- track: nukes
118
- extras:
119
- ambiguous_char: N
120
- ambiguous_emission_prob: 0.25
121
- germline: G
122
- name: insert_left_G
123
- transitions:
124
- IGHJ1_star_01_0: 0.00793650793650794
125
- IGHJ1_star_01_1: 0.00793650793650794
126
- IGHJ1_star_01_10: 0.00705467372134039
127
- IGHJ1_star_01_11: 0.006172839506172841
128
- IGHJ1_star_01_12: 0.005291005291005292
129
- IGHJ1_star_01_13: 0.004409171075837742
130
- IGHJ1_star_01_14: 0.0035273368606701934
131
- IGHJ1_star_01_15: 0.002645502645502645
132
- IGHJ1_star_01_16: 0.0017636684303350963
133
- IGHJ1_star_01_17: 0.0008818342151675474
134
- IGHJ1_star_01_18: 0.00793650793650794
135
- IGHJ1_star_01_2: 0.00793650793650794
136
- IGHJ1_star_01_3: 0.05555555555555557
137
- IGHJ1_star_01_4: 0.04761904761904763
138
- IGHJ1_star_01_5: 0.039682539682539694
139
- IGHJ1_star_01_6: 0.03174603174603176
140
- IGHJ1_star_01_7: 0.023809523809523815
141
- IGHJ1_star_01_8: 0.015873015873015883
142
- IGHJ1_star_01_9: 0.00793650793650794
143
- insert_left_A: 0.10060362173038229
144
- insert_left_C: 0.28672032193158953
145
- insert_left_G: 0.11569416498993963
146
- insert_left_T: 0.21126760563380279
147
- - !!python/object:python.hmmwriter.State
148
- emissions:
149
- probs:
150
- A: 0.03572127809685753
151
- C: 0.03572127809685753
152
- G: 0.03572127809685753
153
- T: 0.8928361657094274
154
- track: nukes
155
- extras:
156
- ambiguous_char: N
157
- ambiguous_emission_prob: 0.25
158
- germline: T
159
- name: insert_left_T
160
- transitions:
161
- IGHJ1_star_01_0: 0.00793650793650794
162
- IGHJ1_star_01_1: 0.00793650793650794
163
- IGHJ1_star_01_10: 0.00705467372134039
164
- IGHJ1_star_01_11: 0.006172839506172841
165
- IGHJ1_star_01_12: 0.005291005291005292
166
- IGHJ1_star_01_13: 0.004409171075837742
167
- IGHJ1_star_01_14: 0.0035273368606701934
168
- IGHJ1_star_01_15: 0.002645502645502645
169
- IGHJ1_star_01_16: 0.0017636684303350963
170
- IGHJ1_star_01_17: 0.0008818342151675474
171
- IGHJ1_star_01_18: 0.00793650793650794
172
- IGHJ1_star_01_2: 0.00793650793650794
173
- IGHJ1_star_01_3: 0.05555555555555557
174
- IGHJ1_star_01_4: 0.04761904761904763
175
- IGHJ1_star_01_5: 0.039682539682539694
176
- IGHJ1_star_01_6: 0.03174603174603176
177
- IGHJ1_star_01_7: 0.023809523809523815
178
- IGHJ1_star_01_8: 0.015873015873015883
179
- IGHJ1_star_01_9: 0.00793650793650794
180
- insert_left_A: 0.10060362173038229
181
- insert_left_C: 0.28672032193158953
182
- insert_left_G: 0.11569416498993963
183
- insert_left_T: 0.21126760563380279
184
- - !!python/object:python.hmmwriter.State
185
- emissions:
186
- probs:
187
- A: 0.03572127809685753
188
- C: 0.03572127809685753
189
- G: 0.8928361657094274
190
- T: 0.03572127809685753
191
- track: nukes
192
- extras:
193
- ambiguous_char: N
194
- ambiguous_emission_prob: 0.25
195
- germline: G
196
- name: IGHJ1_star_01_0
197
- transitions:
198
- IGHJ1_star_01_1: 1.0
199
- - !!python/object:python.hmmwriter.State
200
- emissions:
201
- probs:
202
- A: 0.03560188085868132
203
- C: 0.893194357423956
204
- G: 0.03560188085868132
205
- T: 0.03560188085868132
206
- track: nukes
207
- extras:
208
- ambiguous_char: N
209
- ambiguous_emission_prob: 0.25
210
- germline: C
211
- name: IGHJ1_star_01_1
212
- transitions:
213
- IGHJ1_star_01_2: 1.0
214
- - !!python/object:python.hmmwriter.State
215
- emissions:
216
- probs:
217
- A: 0.035482483620505115
218
- C: 0.035482483620505115
219
- G: 0.035482483620505115
220
- T: 0.8935525491384847
221
- track: nukes
222
- extras:
223
- ambiguous_char: N
224
- ambiguous_emission_prob: 0.25
225
- germline: T
226
- name: IGHJ1_star_01_2
227
- transitions:
228
- IGHJ1_star_01_3: 1.0
229
- - !!python/object:python.hmmwriter.State
230
- emissions:
231
- probs:
232
- A: 0.035875438618922645
233
- C: 0.035875438618922645
234
- G: 0.892373684143232
235
- T: 0.035875438618922645
236
- track: nukes
237
- extras:
238
- ambiguous_char: N
239
- ambiguous_emission_prob: 0.25
240
- germline: G
241
- name: IGHJ1_star_01_3
242
- transitions:
243
- IGHJ1_star_01_4: 1.0
244
- - !!python/object:python.hmmwriter.State
245
- emissions:
246
- probs:
247
- A: 0.892219523621167
248
- C: 0.035926825459611025
249
- G: 0.035926825459611025
250
- T: 0.035926825459611025
251
- track: nukes
252
- extras:
253
- ambiguous_char: N
254
- ambiguous_emission_prob: 0.25
255
- germline: A
256
- name: IGHJ1_star_01_4
257
- transitions:
258
- IGHJ1_star_01_5: 1.0
259
- - !!python/object:python.hmmwriter.State
260
- emissions:
261
- probs:
262
- A: 0.8920653630991018
263
- C: 0.03597821230029939
264
- G: 0.03597821230029939
265
- T: 0.03597821230029939
266
- track: nukes
267
- extras:
268
- ambiguous_char: N
269
- ambiguous_emission_prob: 0.25
270
- germline: A
271
- name: IGHJ1_star_01_5
272
- transitions:
273
- IGHJ1_star_01_6: 1.0
274
- - !!python/object:python.hmmwriter.State
275
- emissions:
276
- probs:
277
- A: 0.03650489466780027
278
- C: 0.03650489466780027
279
- G: 0.03650489466780027
280
- T: 0.8904853159965992
281
- track: nukes
282
- extras:
283
- ambiguous_char: N
284
- ambiguous_emission_prob: 0.25
285
- germline: T
286
- name: IGHJ1_star_01_6
287
- transitions:
288
- IGHJ1_star_01_7: 1.0
289
- - !!python/object:python.hmmwriter.State
290
- emissions:
291
- probs:
292
- A: 0.8917570420549715
293
- C: 0.03608098598167614
294
- G: 0.03608098598167614
295
- T: 0.03608098598167614
296
- track: nukes
297
- extras:
298
- ambiguous_char: N
299
- ambiguous_emission_prob: 0.25
300
- germline: A
301
- name: IGHJ1_star_01_7
302
- transitions:
303
- IGHJ1_star_01_8: 1.0
304
- - !!python/object:python.hmmwriter.State
305
- emissions:
306
- probs:
307
- A: 0.03613237282236451
308
- C: 0.8916028815329065
309
- G: 0.03613237282236451
310
- T: 0.03613237282236451
311
- track: nukes
312
- extras:
313
- ambiguous_char: N
314
- ambiguous_emission_prob: 0.25
315
- germline: C
316
- name: IGHJ1_star_01_8
317
- transitions:
318
- IGHJ1_star_01_9: 1.0
319
- - !!python/object:python.hmmwriter.State
320
- emissions:
321
- probs:
322
- A: 0.035694084024431645
323
- C: 0.035694084024431645
324
- G: 0.035694084024431645
325
- T: 0.8929177479267051
326
- track: nukes
327
- extras:
328
- ambiguous_char: N
329
- ambiguous_emission_prob: 0.25
330
- germline: T
331
- name: IGHJ1_star_01_9
332
- transitions:
333
- IGHJ1_star_01_10: 1.0
334
- - !!python/object:python.hmmwriter.State
335
- emissions:
336
- probs:
337
- A: 0.03569106246082877
338
- C: 0.03569106246082877
339
- G: 0.03569106246082877
340
- T: 0.8929268126175137
341
- track: nukes
342
- extras:
343
- ambiguous_char: N
344
- ambiguous_emission_prob: 0.25
345
- germline: T
346
- name: IGHJ1_star_01_10
347
- transitions:
348
- IGHJ1_star_01_11: 1.0
349
- - !!python/object:python.hmmwriter.State
350
- emissions:
351
- probs:
352
- A: 0.03568804089722589
353
- C: 0.8929358773083224
354
- G: 0.03568804089722589
355
- T: 0.03568804089722589
356
- track: nukes
357
- extras:
358
- ambiguous_char: N
359
- ambiguous_emission_prob: 0.25
360
- germline: C
361
- name: IGHJ1_star_01_11
362
- transitions:
363
- IGHJ1_star_01_12: 1.0
364
- - !!python/object:python.hmmwriter.State
365
- emissions:
366
- probs:
367
- A: 0.03568501933362301
368
- C: 0.892944941999131
369
- G: 0.03568501933362301
370
- T: 0.03568501933362301
371
- track: nukes
372
- extras:
373
- ambiguous_char: N
374
- ambiguous_emission_prob: 0.25
375
- germline: C
376
- name: IGHJ1_star_01_12
377
- transitions:
378
- IGHJ1_star_01_13: 1.0
379
- - !!python/object:python.hmmwriter.State
380
- emissions:
381
- probs:
382
- A: 0.8929540066899396
383
- C: 0.03568199777002013
384
- G: 0.03568199777002013
385
- T: 0.03568199777002013
386
- track: nukes
387
- extras:
388
- ambiguous_char: N
389
- ambiguous_emission_prob: 0.25
390
- germline: A
391
- name: IGHJ1_star_01_13
392
- transitions:
393
- IGHJ1_star_01_14: 1.0
394
- - !!python/object:python.hmmwriter.State
395
- emissions:
396
- probs:
397
- A: 0.03567897620641726
398
- C: 0.03567897620641726
399
- G: 0.8929630713807483
400
- T: 0.03567897620641726
401
- track: nukes
402
- extras:
403
- ambiguous_char: N
404
- ambiguous_emission_prob: 0.25
405
- germline: G
406
- name: IGHJ1_star_01_14
407
- transitions:
408
- IGHJ1_star_01_15: 1.0
409
- - !!python/object:python.hmmwriter.State
410
- emissions:
411
- probs:
412
- A: 0.03567595464281438
413
- C: 0.8929721360715569
414
- G: 0.03567595464281438
415
- T: 0.03567595464281438
416
- track: nukes
417
- extras:
418
- ambiguous_char: N
419
- ambiguous_emission_prob: 0.25
420
- germline: C
421
- name: IGHJ1_star_01_15
422
- transitions:
423
- IGHJ1_star_01_16: 1.0
424
- - !!python/object:python.hmmwriter.State
425
- emissions:
426
- probs:
427
- A: 0.8929812007623654
428
- C: 0.03567293307921151
429
- G: 0.03567293307921151
430
- T: 0.03567293307921151
431
- track: nukes
432
- extras:
433
- ambiguous_char: N
434
- ambiguous_emission_prob: 0.25
435
- germline: A
436
- name: IGHJ1_star_01_16
437
- transitions:
438
- IGHJ1_star_01_17: 1.0
439
- - !!python/object:python.hmmwriter.State
440
- emissions:
441
- probs:
442
- A: 0.03566991151560863
443
- C: 0.8929902654531741
444
- G: 0.03566991151560863
445
- T: 0.03566991151560863
446
- track: nukes
447
- extras:
448
- ambiguous_char: N
449
- ambiguous_emission_prob: 0.25
450
- germline: C
451
- name: IGHJ1_star_01_17
452
- transitions:
453
- IGHJ1_star_01_18: 1.0
454
- - !!python/object:python.hmmwriter.State
455
- emissions:
456
- probs:
457
- A: 0.03566688995200575
458
- C: 0.03566688995200575
459
- G: 0.03566688995200575
460
- T: 0.8929993301439827
461
- track: nukes
462
- extras:
463
- ambiguous_char: N
464
- ambiguous_emission_prob: 0.25
465
- germline: T
466
- name: IGHJ1_star_01_18
467
- transitions:
468
- IGHJ1_star_01_19: 1.0
469
- - !!python/object:python.hmmwriter.State
470
- emissions:
471
- probs:
472
- A: 0.035663868388402874
473
- C: 0.035663868388402874
474
- G: 0.8930083948347913
475
- T: 0.035663868388402874
476
- track: nukes
477
- extras:
478
- ambiguous_char: N
479
- ambiguous_emission_prob: 0.25
480
- germline: G
481
- name: IGHJ1_star_01_19
482
- transitions:
483
- IGHJ1_star_01_20: 1.0
484
- - !!python/object:python.hmmwriter.State
485
- emissions:
486
- probs:
487
- A: 0.0356608468248
488
- C: 0.0356608468248
489
- G: 0.8930174595256
490
- T: 0.0356608468248
491
- track: nukes
492
- extras:
493
- ambiguous_char: N
494
- ambiguous_emission_prob: 0.25
495
- germline: G
496
- name: IGHJ1_star_01_20
497
- transitions:
498
- IGHJ1_star_01_21: 1.0
499
- - !!python/object:python.hmmwriter.State
500
- emissions:
501
- probs:
502
- A: 0.03666666666666667
503
- C: 0.03666666666666667
504
- G: 0.89
505
- T: 0.03666666666666667
506
- track: nukes
507
- extras:
508
- ambiguous_char: N
509
- ambiguous_emission_prob: 0.25
510
- germline: G
511
- name: IGHJ1_star_01_21
512
- transitions:
513
- IGHJ1_star_01_22: 1.0
514
- - !!python/object:python.hmmwriter.State
515
- emissions:
516
- probs:
517
- A: 0.0356608468248
518
- C: 0.0356608468248
519
- G: 0.8930174595256
520
- T: 0.0356608468248
521
- track: nukes
522
- extras:
523
- ambiguous_char: N
524
- ambiguous_emission_prob: 0.25
525
- germline: G
526
- name: IGHJ1_star_01_22
527
- transitions:
528
- IGHJ1_star_01_23: 1.0
529
- - !!python/object:python.hmmwriter.State
530
- emissions:
531
- probs:
532
- A: 0.0356608468248
533
- C: 0.8930174595256
534
- G: 0.0356608468248
535
- T: 0.0356608468248
536
- track: nukes
537
- extras:
538
- ambiguous_char: N
539
- ambiguous_emission_prob: 0.25
540
- germline: C
541
- name: IGHJ1_star_01_23
542
- transitions:
543
- IGHJ1_star_01_24: 1.0
544
- - !!python/object:python.hmmwriter.State
545
- emissions:
546
- probs:
547
- A: 0.0356608468248
548
- C: 0.8930174595256
549
- G: 0.0356608468248
550
- T: 0.0356608468248
551
- track: nukes
552
- extras:
553
- ambiguous_char: N
554
- ambiguous_emission_prob: 0.25
555
- germline: C
556
- name: IGHJ1_star_01_24
557
- transitions:
558
- IGHJ1_star_01_25: 1.0
559
- - !!python/object:python.hmmwriter.State
560
- emissions:
561
- probs:
562
- A: 0.8930174595256
563
- C: 0.0356608468248
564
- G: 0.0356608468248
565
- T: 0.0356608468248
566
- track: nukes
567
- extras:
568
- ambiguous_char: N
569
- ambiguous_emission_prob: 0.25
570
- germline: A
571
- name: IGHJ1_star_01_25
572
- transitions:
573
- IGHJ1_star_01_26: 1.0
574
- - !!python/object:python.hmmwriter.State
575
- emissions:
576
- probs:
577
- A: 0.0356608468248
578
- C: 0.0356608468248
579
- G: 0.8930174595256
580
- T: 0.0356608468248
581
- track: nukes
582
- extras:
583
- ambiguous_char: N
584
- ambiguous_emission_prob: 0.25
585
- germline: G
586
- name: IGHJ1_star_01_26
587
- transitions:
588
- IGHJ1_star_01_27: 1.0
589
- - !!python/object:python.hmmwriter.State
590
- emissions:
591
- probs:
592
- A: 0.0356608468248
593
- C: 0.0356608468248
594
- G: 0.8930174595256
595
- T: 0.0356608468248
596
- track: nukes
597
- extras:
598
- ambiguous_char: N
599
- ambiguous_emission_prob: 0.25
600
- germline: G
601
- name: IGHJ1_star_01_27
602
- transitions:
603
- IGHJ1_star_01_28: 1.0
604
- - !!python/object:python.hmmwriter.State
605
- emissions:
606
- probs:
607
- A: 0.0356608468248
608
- C: 0.0356608468248
609
- G: 0.8930174595256
610
- T: 0.0356608468248
611
- track: nukes
612
- extras:
613
- ambiguous_char: N
614
- ambiguous_emission_prob: 0.25
615
- germline: G
616
- name: IGHJ1_star_01_28
617
- transitions:
618
- IGHJ1_star_01_29: 1.0
619
- - !!python/object:python.hmmwriter.State
620
- emissions:
621
- probs:
622
- A: 0.0356608468248
623
- C: 0.8930174595256
624
- G: 0.0356608468248
625
- T: 0.0356608468248
626
- track: nukes
627
- extras:
628
- ambiguous_char: N
629
- ambiguous_emission_prob: 0.25
630
- germline: C
631
- name: IGHJ1_star_01_29
632
- transitions:
633
- IGHJ1_star_01_30: 1.0
634
- - !!python/object:python.hmmwriter.State
635
- emissions:
636
- probs:
637
- A: 0.8930174595256
638
- C: 0.0356608468248
639
- G: 0.0356608468248
640
- T: 0.0356608468248
641
- track: nukes
642
- extras:
643
- ambiguous_char: N
644
- ambiguous_emission_prob: 0.25
645
- germline: A
646
- name: IGHJ1_star_01_30
647
- transitions:
648
- IGHJ1_star_01_31: 1.0
649
- - !!python/object:python.hmmwriter.State
650
- emissions:
651
- probs:
652
- A: 0.03666666666666667
653
- C: 0.89
654
- G: 0.03666666666666667
655
- T: 0.03666666666666667
656
- track: nukes
657
- extras:
658
- ambiguous_char: N
659
- ambiguous_emission_prob: 0.25
660
- germline: C
661
- name: IGHJ1_star_01_31
662
- transitions:
663
- IGHJ1_star_01_32: 1.0
664
- - !!python/object:python.hmmwriter.State
665
- emissions:
666
- probs:
667
- A: 0.0356608468248
668
- C: 0.8930174595256
669
- G: 0.0356608468248
670
- T: 0.0356608468248
671
- track: nukes
672
- extras:
673
- ambiguous_char: N
674
- ambiguous_emission_prob: 0.25
675
- germline: C
676
- name: IGHJ1_star_01_32
677
- transitions:
678
- IGHJ1_star_01_33: 1.0
679
- - !!python/object:python.hmmwriter.State
680
- emissions:
681
- probs:
682
- A: 0.0356608468248
683
- C: 0.8930174595256
684
- G: 0.0356608468248
685
- T: 0.0356608468248
686
- track: nukes
687
- extras:
688
- ambiguous_char: N
689
- ambiguous_emission_prob: 0.25
690
- germline: C
691
- name: IGHJ1_star_01_33
692
- transitions:
693
- IGHJ1_star_01_34: 1.0
694
- - !!python/object:python.hmmwriter.State
695
- emissions:
696
- probs:
697
- A: 0.0356608468248
698
- C: 0.0356608468248
699
- G: 0.0356608468248
700
- T: 0.8930174595256
701
- track: nukes
702
- extras:
703
- ambiguous_char: N
704
- ambiguous_emission_prob: 0.25
705
- germline: T
706
- name: IGHJ1_star_01_34
707
- transitions:
708
- IGHJ1_star_01_35: 1.0
709
- - !!python/object:python.hmmwriter.State
710
- emissions:
711
- probs:
712
- A: 0.0356608468248
713
- C: 0.0356608468248
714
- G: 0.8930174595256
715
- T: 0.0356608468248
716
- track: nukes
717
- extras:
718
- ambiguous_char: N
719
- ambiguous_emission_prob: 0.25
720
- germline: G
721
- name: IGHJ1_star_01_35
722
- transitions:
723
- IGHJ1_star_01_36: 1.0
724
- - !!python/object:python.hmmwriter.State
725
- emissions:
726
- probs:
727
- A: 0.0356608468248
728
- C: 0.0356608468248
729
- G: 0.8930174595256
730
- T: 0.0356608468248
731
- track: nukes
732
- extras:
733
- ambiguous_char: N
734
- ambiguous_emission_prob: 0.25
735
- germline: G
736
- name: IGHJ1_star_01_36
737
- transitions:
738
- IGHJ1_star_01_37: 1.0
739
- - !!python/object:python.hmmwriter.State
740
- emissions:
741
- probs:
742
- A: 0.0356608468248
743
- C: 0.0356608468248
744
- G: 0.0356608468248
745
- T: 0.8930174595256
746
- track: nukes
747
- extras:
748
- ambiguous_char: N
749
- ambiguous_emission_prob: 0.25
750
- germline: T
751
- name: IGHJ1_star_01_37
752
- transitions:
753
- IGHJ1_star_01_38: 1.0
754
- - !!python/object:python.hmmwriter.State
755
- emissions:
756
- probs:
757
- A: 0.0356608468248
758
- C: 0.8930174595256
759
- G: 0.0356608468248
760
- T: 0.0356608468248
761
- track: nukes
762
- extras:
763
- ambiguous_char: N
764
- ambiguous_emission_prob: 0.25
765
- germline: C
766
- name: IGHJ1_star_01_38
767
- transitions:
768
- IGHJ1_star_01_39: 1.0
769
- - !!python/object:python.hmmwriter.State
770
- emissions:
771
- probs:
772
- A: 0.8930174595256
773
- C: 0.0356608468248
774
- G: 0.0356608468248
775
- T: 0.0356608468248
776
- track: nukes
777
- extras:
778
- ambiguous_char: N
779
- ambiguous_emission_prob: 0.25
780
- germline: A
781
- name: IGHJ1_star_01_39
782
- transitions:
783
- IGHJ1_star_01_40: 1.0
784
- - !!python/object:python.hmmwriter.State
785
- emissions:
786
- probs:
787
- A: 0.0356608468248
788
- C: 0.8930174595256
789
- G: 0.0356608468248
790
- T: 0.0356608468248
791
- track: nukes
792
- extras:
793
- ambiguous_char: N
794
- ambiguous_emission_prob: 0.25
795
- germline: C
796
- name: IGHJ1_star_01_40
797
- transitions:
798
- IGHJ1_star_01_41: 1.0
799
- - !!python/object:python.hmmwriter.State
800
- emissions:
801
- probs:
802
- A: 0.0356608468248
803
- C: 0.8930174595256
804
- G: 0.0356608468248
805
- T: 0.0356608468248
806
- track: nukes
807
- extras:
808
- ambiguous_char: N
809
- ambiguous_emission_prob: 0.25
810
- germline: C
811
- name: IGHJ1_star_01_41
812
- transitions:
813
- IGHJ1_star_01_42: 1.0
814
- - !!python/object:python.hmmwriter.State
815
- emissions:
816
- probs:
817
- A: 0.0356608468248
818
- C: 0.0356608468248
819
- G: 0.8930174595256
820
- T: 0.0356608468248
821
- track: nukes
822
- extras:
823
- ambiguous_char: N
824
- ambiguous_emission_prob: 0.25
825
- germline: G
826
- name: IGHJ1_star_01_42
827
- transitions:
828
- IGHJ1_star_01_43: 1.0
829
- - !!python/object:python.hmmwriter.State
830
- emissions:
831
- probs:
832
- A: 0.0356608468248
833
- C: 0.0356608468248
834
- G: 0.0356608468248
835
- T: 0.8930174595256
836
- track: nukes
837
- extras:
838
- ambiguous_char: N
839
- ambiguous_emission_prob: 0.25
840
- germline: T
841
- name: IGHJ1_star_01_43
842
- transitions:
843
- IGHJ1_star_01_44: 1.0
844
- - !!python/object:python.hmmwriter.State
845
- emissions:
846
- probs:
847
- A: 0.0356608468248
848
- C: 0.8930174595256
849
- G: 0.0356608468248
850
- T: 0.0356608468248
851
- track: nukes
852
- extras:
853
- ambiguous_char: N
854
- ambiguous_emission_prob: 0.25
855
- germline: C
856
- name: IGHJ1_star_01_44
857
- transitions:
858
- IGHJ1_star_01_45: 1.0
859
- - !!python/object:python.hmmwriter.State
860
- emissions:
861
- probs:
862
- A: 0.0356608468248
863
- C: 0.0356608468248
864
- G: 0.0356608468248
865
- T: 0.8930174595256
866
- track: nukes
867
- extras:
868
- ambiguous_char: N
869
- ambiguous_emission_prob: 0.25
870
- germline: T
871
- name: IGHJ1_star_01_45
872
- transitions:
873
- IGHJ1_star_01_46: 1.0
874
- - !!python/object:python.hmmwriter.State
875
- emissions:
876
- probs:
877
- A: 0.0356608468248
878
- C: 0.8930174595256
879
- G: 0.0356608468248
880
- T: 0.0356608468248
881
- track: nukes
882
- extras:
883
- ambiguous_char: N
884
- ambiguous_emission_prob: 0.25
885
- germline: C
886
- name: IGHJ1_star_01_46
887
- transitions:
888
- IGHJ1_star_01_47: 1.0
889
- - !!python/object:python.hmmwriter.State
890
- emissions:
891
- probs:
892
- A: 0.0356608468248
893
- C: 0.8930174595256
894
- G: 0.0356608468248
895
- T: 0.0356608468248
896
- track: nukes
897
- extras:
898
- ambiguous_char: N
899
- ambiguous_emission_prob: 0.25
900
- germline: C
901
- name: IGHJ1_star_01_47
902
- transitions:
903
- IGHJ1_star_01_48: 1.0
904
- - !!python/object:python.hmmwriter.State
905
- emissions:
906
- probs:
907
- A: 0.0356608468248
908
- C: 0.0356608468248
909
- G: 0.0356608468248
910
- T: 0.8930174595256
911
- track: nukes
912
- extras:
913
- ambiguous_char: N
914
- ambiguous_emission_prob: 0.25
915
- germline: T
916
- name: IGHJ1_star_01_48
917
- transitions:
918
- IGHJ1_star_01_49: 1.0
919
- - !!python/object:python.hmmwriter.State
920
- emissions:
921
- probs:
922
- A: 0.0356608468248
923
- C: 0.8930174595256
924
- G: 0.0356608468248
925
- T: 0.0356608468248
926
- track: nukes
927
- extras:
928
- ambiguous_char: N
929
- ambiguous_emission_prob: 0.25
930
- germline: C
931
- name: IGHJ1_star_01_49
932
- transitions:
933
- IGHJ1_star_01_50: 1.0
934
- - !!python/object:python.hmmwriter.State
935
- emissions:
936
- probs:
937
- A: 0.8930174595256
938
- C: 0.0356608468248
939
- G: 0.0356608468248
940
- T: 0.0356608468248
941
- track: nukes
942
- extras:
943
- ambiguous_char: N
944
- ambiguous_emission_prob: 0.25
945
- germline: A
946
- name: IGHJ1_star_01_50
947
- transitions:
948
- IGHJ1_star_01_51: 1.0
949
- - !!python/object:python.hmmwriter.State
950
- emissions:
951
- probs:
952
- A: 0.0356608468248
953
- C: 0.0356608468248
954
- G: 0.8930174595256
955
- T: 0.0356608468248
956
- track: nukes
957
- extras:
958
- ambiguous_char: N
959
- ambiguous_emission_prob: 0.25
960
- germline: G
961
- name: IGHJ1_star_01_51
962
- transitions:
963
- end: 0.04
964
- insert_right_N: 0.96
965
- - !!python/object:python.hmmwriter.State
966
- emissions:
967
- probs:
968
- A: 0.25
969
- C: 0.25
970
- G: 0.25
971
- T: 0.25
972
- track: nukes
973
- extras:
974
- ambiguous_char: N
975
- ambiguous_emission_prob: 0.25
976
- germline: N
977
- name: insert_right_N
978
- transitions:
979
- end: 0.040000000000000036
980
- insert_right_N: 0.96
981
- tracks:
982
- nukes:
983
- - A
984
- - C
985
- - G
986
- - T