multipers 2.2.3__cp311-cp311-win_amd64.whl → 2.3.1__cp311-cp311-win_amd64.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
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- multipers/__init__.py +33 -31
- multipers/_signed_measure_meta.py +430 -430
- multipers/_slicer_meta.py +211 -212
- multipers/data/MOL2.py +458 -458
- multipers/data/UCR.py +18 -18
- multipers/data/graphs.py +466 -466
- multipers/data/immuno_regions.py +27 -27
- multipers/data/pytorch2simplextree.py +90 -90
- multipers/data/shape3d.py +101 -101
- multipers/data/synthetic.py +113 -111
- multipers/distances.py +198 -198
- multipers/filtration_conversions.pxd.tp +84 -84
- multipers/filtrations/__init__.py +18 -0
- multipers/{ml/convolutions.py → filtrations/density.py} +563 -520
- multipers/filtrations/filtrations.py +289 -0
- multipers/filtrations.pxd +224 -224
- multipers/function_rips.cp311-win_amd64.pyd +0 -0
- multipers/function_rips.pyx +105 -105
- multipers/grids.cp311-win_amd64.pyd +0 -0
- multipers/grids.pyx +350 -350
- multipers/gudhi/Persistence_slices_interface.h +132 -132
- multipers/gudhi/Simplex_tree_interface.h +239 -245
- multipers/gudhi/Simplex_tree_multi_interface.h +516 -561
- multipers/gudhi/cubical_to_boundary.h +59 -59
- multipers/gudhi/gudhi/Bitmap_cubical_complex.h +450 -450
- multipers/gudhi/gudhi/Bitmap_cubical_complex_base.h +1070 -1070
- multipers/gudhi/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h +579 -579
- multipers/gudhi/gudhi/Debug_utils.h +45 -45
- multipers/gudhi/gudhi/Fields/Multi_field.h +484 -484
- multipers/gudhi/gudhi/Fields/Multi_field_operators.h +455 -455
- multipers/gudhi/gudhi/Fields/Multi_field_shared.h +450 -450
- multipers/gudhi/gudhi/Fields/Multi_field_small.h +531 -531
- multipers/gudhi/gudhi/Fields/Multi_field_small_operators.h +507 -507
- multipers/gudhi/gudhi/Fields/Multi_field_small_shared.h +531 -531
- multipers/gudhi/gudhi/Fields/Z2_field.h +355 -355
- multipers/gudhi/gudhi/Fields/Z2_field_operators.h +376 -376
- multipers/gudhi/gudhi/Fields/Zp_field.h +420 -420
- multipers/gudhi/gudhi/Fields/Zp_field_operators.h +400 -400
- multipers/gudhi/gudhi/Fields/Zp_field_shared.h +418 -418
- multipers/gudhi/gudhi/Flag_complex_edge_collapser.h +337 -337
- multipers/gudhi/gudhi/Matrix.h +2107 -2107
- multipers/gudhi/gudhi/Multi_critical_filtration.h +1038 -1038
- multipers/gudhi/gudhi/Multi_persistence/Box.h +171 -171
- multipers/gudhi/gudhi/Multi_persistence/Line.h +282 -282
- multipers/gudhi/gudhi/Off_reader.h +173 -173
- multipers/gudhi/gudhi/One_critical_filtration.h +1433 -1431
- multipers/gudhi/gudhi/Persistence_matrix/Base_matrix.h +769 -769
- multipers/gudhi/gudhi/Persistence_matrix/Base_matrix_with_column_compression.h +686 -686
- multipers/gudhi/gudhi/Persistence_matrix/Boundary_matrix.h +842 -842
- multipers/gudhi/gudhi/Persistence_matrix/Chain_matrix.h +1350 -1350
- multipers/gudhi/gudhi/Persistence_matrix/Id_to_index_overlay.h +1105 -1105
- multipers/gudhi/gudhi/Persistence_matrix/Position_to_index_overlay.h +859 -859
- multipers/gudhi/gudhi/Persistence_matrix/RU_matrix.h +910 -910
- multipers/gudhi/gudhi/Persistence_matrix/allocators/entry_constructors.h +139 -139
- multipers/gudhi/gudhi/Persistence_matrix/base_pairing.h +230 -230
- multipers/gudhi/gudhi/Persistence_matrix/base_swap.h +211 -211
- multipers/gudhi/gudhi/Persistence_matrix/boundary_cell_position_to_id_mapper.h +60 -60
- multipers/gudhi/gudhi/Persistence_matrix/boundary_face_position_to_id_mapper.h +60 -60
- multipers/gudhi/gudhi/Persistence_matrix/chain_pairing.h +136 -136
- multipers/gudhi/gudhi/Persistence_matrix/chain_rep_cycles.h +190 -190
- multipers/gudhi/gudhi/Persistence_matrix/chain_vine_swap.h +616 -616
- multipers/gudhi/gudhi/Persistence_matrix/columns/chain_column_extra_properties.h +150 -150
- multipers/gudhi/gudhi/Persistence_matrix/columns/column_dimension_holder.h +106 -106
- multipers/gudhi/gudhi/Persistence_matrix/columns/column_utilities.h +219 -219
- multipers/gudhi/gudhi/Persistence_matrix/columns/entry_types.h +327 -327
- multipers/gudhi/gudhi/Persistence_matrix/columns/heap_column.h +1140 -1140
- multipers/gudhi/gudhi/Persistence_matrix/columns/intrusive_list_column.h +934 -934
- multipers/gudhi/gudhi/Persistence_matrix/columns/intrusive_set_column.h +934 -934
- multipers/gudhi/gudhi/Persistence_matrix/columns/list_column.h +980 -980
- multipers/gudhi/gudhi/Persistence_matrix/columns/naive_vector_column.h +1092 -1092
- multipers/gudhi/gudhi/Persistence_matrix/columns/row_access.h +192 -192
- multipers/gudhi/gudhi/Persistence_matrix/columns/set_column.h +921 -921
- multipers/gudhi/gudhi/Persistence_matrix/columns/small_vector_column.h +1093 -1093
- multipers/gudhi/gudhi/Persistence_matrix/columns/unordered_set_column.h +1012 -1012
- multipers/gudhi/gudhi/Persistence_matrix/columns/vector_column.h +1244 -1244
- multipers/gudhi/gudhi/Persistence_matrix/matrix_dimension_holders.h +186 -186
- multipers/gudhi/gudhi/Persistence_matrix/matrix_row_access.h +164 -164
- multipers/gudhi/gudhi/Persistence_matrix/ru_pairing.h +156 -156
- multipers/gudhi/gudhi/Persistence_matrix/ru_rep_cycles.h +376 -376
- multipers/gudhi/gudhi/Persistence_matrix/ru_vine_swap.h +540 -540
- multipers/gudhi/gudhi/Persistent_cohomology/Field_Zp.h +118 -118
- multipers/gudhi/gudhi/Persistent_cohomology/Multi_field.h +173 -173
- multipers/gudhi/gudhi/Persistent_cohomology/Persistent_cohomology_column.h +128 -128
- multipers/gudhi/gudhi/Persistent_cohomology.h +745 -745
- multipers/gudhi/gudhi/Points_off_io.h +171 -171
- multipers/gudhi/gudhi/Simple_object_pool.h +69 -69
- multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_iterators.h +463 -463
- multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h +83 -83
- multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_siblings.h +106 -106
- multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_star_simplex_iterators.h +277 -277
- multipers/gudhi/gudhi/Simplex_tree/hooks_simplex_base.h +62 -62
- multipers/gudhi/gudhi/Simplex_tree/indexing_tag.h +27 -27
- multipers/gudhi/gudhi/Simplex_tree/serialization_utils.h +62 -62
- multipers/gudhi/gudhi/Simplex_tree/simplex_tree_options.h +157 -157
- multipers/gudhi/gudhi/Simplex_tree.h +2794 -2794
- multipers/gudhi/gudhi/Simplex_tree_multi.h +152 -163
- multipers/gudhi/gudhi/distance_functions.h +62 -62
- multipers/gudhi/gudhi/graph_simplicial_complex.h +104 -104
- multipers/gudhi/gudhi/persistence_interval.h +253 -253
- multipers/gudhi/gudhi/persistence_matrix_options.h +170 -170
- multipers/gudhi/gudhi/reader_utils.h +367 -367
- multipers/gudhi/mma_interface_coh.h +256 -255
- multipers/gudhi/mma_interface_h0.h +223 -231
- multipers/gudhi/mma_interface_matrix.h +291 -282
- multipers/gudhi/naive_merge_tree.h +536 -575
- multipers/gudhi/scc_io.h +310 -289
- multipers/gudhi/truc.h +957 -888
- multipers/io.cp311-win_amd64.pyd +0 -0
- multipers/io.pyx +714 -711
- multipers/ml/accuracies.py +90 -90
- multipers/ml/invariants_with_persistable.py +79 -79
- multipers/ml/kernels.py +176 -176
- multipers/ml/mma.py +713 -714
- multipers/ml/one.py +472 -472
- multipers/ml/point_clouds.py +352 -346
- multipers/ml/signed_measures.py +1589 -1589
- multipers/ml/sliced_wasserstein.py +461 -461
- multipers/ml/tools.py +113 -113
- multipers/mma_structures.cp311-win_amd64.pyd +0 -0
- multipers/mma_structures.pxd +127 -127
- multipers/mma_structures.pyx +4 -8
- multipers/mma_structures.pyx.tp +1083 -1085
- multipers/multi_parameter_rank_invariant/diff_helpers.h +84 -93
- multipers/multi_parameter_rank_invariant/euler_characteristic.h +97 -97
- multipers/multi_parameter_rank_invariant/function_rips.h +322 -322
- multipers/multi_parameter_rank_invariant/hilbert_function.h +769 -769
- multipers/multi_parameter_rank_invariant/persistence_slices.h +148 -148
- multipers/multi_parameter_rank_invariant/rank_invariant.h +369 -369
- multipers/multiparameter_edge_collapse.py +41 -41
- multipers/multiparameter_module_approximation/approximation.h +2298 -2295
- multipers/multiparameter_module_approximation/combinatory.h +129 -129
- multipers/multiparameter_module_approximation/debug.h +107 -107
- multipers/multiparameter_module_approximation/format_python-cpp.h +286 -286
- multipers/multiparameter_module_approximation/heap_column.h +238 -238
- multipers/multiparameter_module_approximation/images.h +79 -79
- multipers/multiparameter_module_approximation/list_column.h +174 -174
- multipers/multiparameter_module_approximation/list_column_2.h +232 -232
- multipers/multiparameter_module_approximation/ru_matrix.h +347 -347
- multipers/multiparameter_module_approximation/set_column.h +135 -135
- multipers/multiparameter_module_approximation/structure_higher_dim_barcode.h +36 -36
- multipers/multiparameter_module_approximation/unordered_set_column.h +166 -166
- multipers/multiparameter_module_approximation/utilities.h +403 -419
- multipers/multiparameter_module_approximation/vector_column.h +223 -223
- multipers/multiparameter_module_approximation/vector_matrix.h +331 -331
- multipers/multiparameter_module_approximation/vineyards.h +464 -464
- multipers/multiparameter_module_approximation/vineyards_trajectories.h +649 -649
- multipers/multiparameter_module_approximation.cp311-win_amd64.pyd +0 -0
- multipers/multiparameter_module_approximation.pyx +218 -217
- multipers/pickle.py +90 -53
- multipers/plots.py +342 -334
- multipers/point_measure.cp311-win_amd64.pyd +0 -0
- multipers/point_measure.pyx +322 -320
- multipers/simplex_tree_multi.cp311-win_amd64.pyd +0 -0
- multipers/simplex_tree_multi.pxd +133 -133
- multipers/simplex_tree_multi.pyx +115 -48
- multipers/simplex_tree_multi.pyx.tp +1947 -1935
- multipers/slicer.cp311-win_amd64.pyd +0 -0
- multipers/slicer.pxd +301 -120
- multipers/slicer.pxd.tp +218 -214
- multipers/slicer.pyx +1570 -507
- multipers/slicer.pyx.tp +931 -914
- multipers/tensor/tensor.h +672 -672
- multipers/tensor.pxd +13 -13
- multipers/test.pyx +44 -44
- multipers/tests/__init__.py +57 -57
- multipers/torch/diff_grids.py +217 -217
- multipers/torch/rips_density.py +310 -304
- {multipers-2.2.3.dist-info → multipers-2.3.1.dist-info}/LICENSE +21 -21
- {multipers-2.2.3.dist-info → multipers-2.3.1.dist-info}/METADATA +21 -11
- multipers-2.3.1.dist-info/RECORD +182 -0
- {multipers-2.2.3.dist-info → multipers-2.3.1.dist-info}/WHEEL +1 -1
- multipers/tests/test_diff_helper.py +0 -73
- multipers/tests/test_hilbert_function.py +0 -82
- multipers/tests/test_mma.py +0 -83
- multipers/tests/test_point_clouds.py +0 -49
- multipers/tests/test_python-cpp_conversion.py +0 -82
- multipers/tests/test_signed_betti.py +0 -181
- multipers/tests/test_signed_measure.py +0 -89
- multipers/tests/test_simplextreemulti.py +0 -221
- multipers/tests/test_slicer.py +0 -221
- multipers-2.2.3.dist-info/RECORD +0 -189
- {multipers-2.2.3.dist-info → multipers-2.3.1.dist-info}/top_level.txt +0 -0
multipers/filtrations.pxd
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void swap(vector&)
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# C++11 methods
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One_critical_filtration(One_critical_filtration&) except + nogil
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ctypedef size_t size_type
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ctypedef One_critical_filtration[T] filtration_type
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void add_guaranteed_generator(One_critical_filtration[T]) nogil
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void add_generator(One_critical_filtration[T]) nogil
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void simplify() nogil
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void set_num_generators(size_t) nogil
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void push_to_least_common_upper_bound(One_critical_filtration[T]&) except + nogil
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void pull_to_greatest_common_lower_bound(One_critical_filtration[T]&) except + nogil
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cdef extern from "gudhi/Multi_persistence/Box.h" namespace "Gudhi::multi_persistence":
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ctypedef vector[T] corner_type
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Box() except +
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Box( pair[vector[T], vector[T]]&) nogil
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void inflate(T) nogil
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const One_critical_filtration[T]& get_lower_corner() nogil
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const One_critical_filtration[T]& get_upper_corner() nogil
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pair[One_critical_filtration[T], One_critical_filtration[T]] get_bounding_corners() nogil
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cdef extern from "gudhi/Multi_persistence/Line.h" namespace "Gudhi::multi_persistence":
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cdef cppclass Line[T=*]:
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ctypedef One_critical_filtration[T] point_type
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Line() except + nogil
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Line(One_critical_filtration[T]&) except + nogil
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Line(One_critical_filtration[T]&, One_critical_filtration[T]&) except + nogil
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# ------ useful types:
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# ctypedef One_critical_filtration[float] Generator
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# ctypedef Multi_critical_filtration[float] kcritical
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from libcpp.utility cimport pair
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from libcpp cimport bool
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from libcpp.vector cimport vector
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from libcpp cimport tuple
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from libc.stdint cimport uintptr_t,intptr_t
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from cpython cimport Py_buffer
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cdef extern from "gudhi/One_critical_filtration.h" namespace "Gudhi::multi_filtration":
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|
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cdef cppclass One_critical_filtration[T=*]:
|
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## Copied from cython vector
|
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ctypedef size_t size_type
|
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ctypedef ptrdiff_t difference_type
|
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ctypedef T value_type
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cppclass const_iterator
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cppclass iterator:
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iterator() except +
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iterator(iterator&) except +
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value_type& operator*()
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iterator operator++()
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iterator operator--()
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iterator operator++(int)
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iterator operator--(int)
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iterator operator+(size_type)
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iterator operator-(size_type)
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difference_type operator-(iterator)
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difference_type operator-(const_iterator)
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bint operator==(iterator)
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bint operator==(const_iterator)
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bint operator!=(iterator)
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bint operator!=(const_iterator)
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bint operator<(iterator)
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bint operator<(const_iterator)
|
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bint operator>(iterator)
|
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bint operator>(const_iterator)
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bint operator<=(iterator)
|
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bint operator<=(const_iterator)
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+
bint operator>=(iterator)
|
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40
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+
bint operator>=(const_iterator)
|
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41
|
+
cppclass const_iterator:
|
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42
|
+
const_iterator() except +
|
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43
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+
const_iterator(iterator&) except +
|
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44
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const_iterator(const_iterator&) except +
|
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operator=(iterator&) except +
|
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46
|
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const value_type& operator*()
|
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47
|
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const_iterator operator++()
|
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48
|
+
const_iterator operator--()
|
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49
|
+
const_iterator operator++(int)
|
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50
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+
const_iterator operator--(int)
|
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51
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+
const_iterator operator+(size_type)
|
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52
|
+
const_iterator operator-(size_type)
|
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53
|
+
difference_type operator-(iterator)
|
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54
|
+
difference_type operator-(const_iterator)
|
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55
|
+
bint operator==(iterator)
|
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56
|
+
bint operator==(const_iterator)
|
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57
|
+
bint operator!=(iterator)
|
|
58
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+
bint operator!=(const_iterator)
|
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59
|
+
bint operator<(iterator)
|
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60
|
+
bint operator<(const_iterator)
|
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61
|
+
bint operator>(iterator)
|
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62
|
+
bint operator>(const_iterator)
|
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63
|
+
bint operator<=(iterator)
|
|
64
|
+
bint operator<=(const_iterator)
|
|
65
|
+
bint operator>=(iterator)
|
|
66
|
+
bint operator>=(const_iterator)
|
|
67
|
+
|
|
68
|
+
cppclass const_reverse_iterator
|
|
69
|
+
cppclass reverse_iterator:
|
|
70
|
+
reverse_iterator() except +
|
|
71
|
+
reverse_iterator(reverse_iterator&) except +
|
|
72
|
+
value_type& operator*()
|
|
73
|
+
reverse_iterator operator++()
|
|
74
|
+
reverse_iterator operator--()
|
|
75
|
+
reverse_iterator operator++(int)
|
|
76
|
+
reverse_iterator operator--(int)
|
|
77
|
+
reverse_iterator operator+(size_type)
|
|
78
|
+
reverse_iterator operator-(size_type)
|
|
79
|
+
difference_type operator-(iterator)
|
|
80
|
+
difference_type operator-(const_iterator)
|
|
81
|
+
bint operator==(reverse_iterator)
|
|
82
|
+
bint operator==(const_reverse_iterator)
|
|
83
|
+
bint operator!=(reverse_iterator)
|
|
84
|
+
bint operator!=(const_reverse_iterator)
|
|
85
|
+
bint operator<(reverse_iterator)
|
|
86
|
+
bint operator<(const_reverse_iterator)
|
|
87
|
+
bint operator>(reverse_iterator)
|
|
88
|
+
bint operator>(const_reverse_iterator)
|
|
89
|
+
bint operator<=(reverse_iterator)
|
|
90
|
+
bint operator<=(const_reverse_iterator)
|
|
91
|
+
bint operator>=(reverse_iterator)
|
|
92
|
+
bint operator>=(const_reverse_iterator)
|
|
93
|
+
cppclass const_reverse_iterator:
|
|
94
|
+
const_reverse_iterator() except +
|
|
95
|
+
const_reverse_iterator(reverse_iterator&) except +
|
|
96
|
+
operator=(reverse_iterator&) except +
|
|
97
|
+
const value_type& operator*()
|
|
98
|
+
const_reverse_iterator operator++()
|
|
99
|
+
const_reverse_iterator operator--()
|
|
100
|
+
const_reverse_iterator operator++(int)
|
|
101
|
+
const_reverse_iterator operator--(int)
|
|
102
|
+
const_reverse_iterator operator+(size_type)
|
|
103
|
+
const_reverse_iterator operator-(size_type)
|
|
104
|
+
difference_type operator-(iterator)
|
|
105
|
+
difference_type operator-(const_iterator)
|
|
106
|
+
bint operator==(reverse_iterator)
|
|
107
|
+
bint operator==(const_reverse_iterator)
|
|
108
|
+
bint operator!=(reverse_iterator)
|
|
109
|
+
bint operator!=(const_reverse_iterator)
|
|
110
|
+
bint operator<(reverse_iterator)
|
|
111
|
+
bint operator<(const_reverse_iterator)
|
|
112
|
+
bint operator>(reverse_iterator)
|
|
113
|
+
bint operator>(const_reverse_iterator)
|
|
114
|
+
bint operator<=(reverse_iterator)
|
|
115
|
+
bint operator<=(const_reverse_iterator)
|
|
116
|
+
bint operator>=(reverse_iterator)
|
|
117
|
+
bint operator>=(const_reverse_iterator)
|
|
118
|
+
value_type& operator[](size_type)
|
|
119
|
+
#vector& operator=(vector&)
|
|
120
|
+
void assign(size_type, const value_type&)
|
|
121
|
+
void assign[InputIt](InputIt, InputIt) except +
|
|
122
|
+
value_type& at(size_type) except +
|
|
123
|
+
value_type& back()
|
|
124
|
+
iterator begin()
|
|
125
|
+
const_iterator const_begin "begin"()
|
|
126
|
+
const_iterator cbegin()
|
|
127
|
+
size_type capacity()
|
|
128
|
+
void clear() nogil
|
|
129
|
+
bint empty() nogil
|
|
130
|
+
iterator end()
|
|
131
|
+
const_iterator const_end "end"()
|
|
132
|
+
const_iterator cend()
|
|
133
|
+
iterator erase(iterator)
|
|
134
|
+
iterator erase(iterator, iterator)
|
|
135
|
+
value_type& front()
|
|
136
|
+
iterator insert(iterator, const value_type&) except +
|
|
137
|
+
iterator insert(iterator, size_type, const value_type&) except +
|
|
138
|
+
iterator insert[InputIt](iterator, InputIt, InputIt) except +
|
|
139
|
+
size_type max_size()
|
|
140
|
+
void pop_back()
|
|
141
|
+
void push_back(value_type&) except + nogil
|
|
142
|
+
reverse_iterator rbegin()
|
|
143
|
+
const_reverse_iterator const_rbegin "rbegin"()
|
|
144
|
+
const_reverse_iterator crbegin()
|
|
145
|
+
reverse_iterator rend()
|
|
146
|
+
const_reverse_iterator const_rend "rend"()
|
|
147
|
+
const_reverse_iterator crend()
|
|
148
|
+
void reserve(size_type) except + nogil
|
|
149
|
+
void resize(size_type) except + nogil
|
|
150
|
+
void resize(size_type, value_type&) except +
|
|
151
|
+
# size_type size()
|
|
152
|
+
size_type num_parameters() nogil
|
|
153
|
+
size_type num_generators() nogil
|
|
154
|
+
void swap(vector&)
|
|
155
|
+
|
|
156
|
+
# C++11 methods
|
|
157
|
+
value_type* data()
|
|
158
|
+
const value_type* const_data "data"()
|
|
159
|
+
void shrink_to_fit() except +
|
|
160
|
+
iterator emplace(const_iterator, ...) except +
|
|
161
|
+
value_type& emplace_back(...) except +
|
|
162
|
+
|
|
163
|
+
## end of copied from cython vector
|
|
164
|
+
|
|
165
|
+
One_critical_filtration() except + nogil
|
|
166
|
+
One_critical_filtration(vector[value_type]&) except + nogil
|
|
167
|
+
One_critical_filtration(One_critical_filtration&) except + nogil
|
|
168
|
+
|
|
169
|
+
One_critical_filtration(int) nogil
|
|
170
|
+
One_critical_filtration& operator=(const One_critical_filtration&) except +
|
|
171
|
+
@staticmethod
|
|
172
|
+
vector[value_type]& vector[value_type]() nogil
|
|
173
|
+
|
|
174
|
+
void push_to_least_common_upper_bound(One_critical_filtration[T]&) nogil
|
|
175
|
+
void pull_to_greatest_common_lower_bound(One_critical_filtration[T]&) nogil
|
|
176
|
+
|
|
177
|
+
bool is_finite() nogil
|
|
178
|
+
|
|
179
|
+
|
|
180
|
+
cdef extern from "gudhi/Multi_critical_filtration.h" namespace "Gudhi::multi_filtration":
|
|
181
|
+
cdef cppclass Multi_critical_filtration[T=*]:
|
|
182
|
+
ctypedef size_t size_type
|
|
183
|
+
ctypedef One_critical_filtration[T] filtration_type
|
|
184
|
+
Multi_critical_filtration() except + nogil
|
|
185
|
+
Multi_critical_filtration(One_critical_filtration[T]) except +
|
|
186
|
+
Multi_critical_filtration[T]& operator=(const Multi_critical_filtration[T]&) except +
|
|
187
|
+
size_t num_parameters() noexcept nogil
|
|
188
|
+
size_t num_generators() noexcept nogil
|
|
189
|
+
void add_guaranteed_generator(One_critical_filtration[T]) nogil
|
|
190
|
+
void add_generator(One_critical_filtration[T]) nogil
|
|
191
|
+
void reserve(size_t) noexcept nogil
|
|
192
|
+
void simplify() nogil
|
|
193
|
+
void set_num_generators(size_t) nogil
|
|
194
|
+
One_critical_filtration[T]& operator[](int) nogil
|
|
195
|
+
|
|
196
|
+
void push_to_least_common_upper_bound(One_critical_filtration[T]&) except + nogil
|
|
197
|
+
void pull_to_greatest_common_lower_bound(One_critical_filtration[T]&) except + nogil
|
|
198
|
+
|
|
199
|
+
cdef extern from "gudhi/Multi_persistence/Box.h" namespace "Gudhi::multi_persistence":
|
|
200
|
+
cdef cppclass Box[T=*]:
|
|
201
|
+
ctypedef vector[T] corner_type
|
|
202
|
+
Box() except +
|
|
203
|
+
Box( vector[T]&, vector[T]&) nogil
|
|
204
|
+
Box( pair[vector[T], vector[T]]&) nogil
|
|
205
|
+
void inflate(T) nogil
|
|
206
|
+
const One_critical_filtration[T]& get_lower_corner() nogil
|
|
207
|
+
const One_critical_filtration[T]& get_upper_corner() nogil
|
|
208
|
+
bool contains(vector[T]&) nogil
|
|
209
|
+
pair[One_critical_filtration[T], One_critical_filtration[T]] get_bounding_corners() nogil
|
|
210
|
+
|
|
211
|
+
cdef extern from "gudhi/Multi_persistence/Line.h" namespace "Gudhi::multi_persistence":
|
|
212
|
+
cdef cppclass Line[T=*]:
|
|
213
|
+
ctypedef One_critical_filtration[T] point_type
|
|
214
|
+
Line() except + nogil
|
|
215
|
+
Line(One_critical_filtration[T]&) except + nogil
|
|
216
|
+
Line(One_critical_filtration[T]&, One_critical_filtration[T]&) except + nogil
|
|
217
|
+
|
|
218
|
+
|
|
219
|
+
|
|
220
|
+
|
|
221
|
+
|
|
222
|
+
# ------ useful types:
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# ctypedef One_critical_filtration[float] Generator
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# ctypedef Multi_critical_filtration[float] kcritical
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