mat3ra-esse 2025.7.1.post0__py3-none-any.whl → 2025.7.29.post0__py3-none-any.whl
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- mat3ra/esse/data/examples.py +1 -1
- mat3ra/esse/data/schemas.py +1 -1
- mat3ra/esse/models/apse/file/applications/espresso/7.2/pw_x.py +6 -6
- mat3ra/esse/models/core/abstract/vector_2d.py +13 -0
- mat3ra/esse/models/core/primitive/array_of_2_numbers.py +13 -0
- mat3ra/esse/models/core/reusable/energy.py +2 -2
- mat3ra/esse/models/element.py +6 -6
- mat3ra/esse/models/job/__init__.py +8 -0
- mat3ra/esse/models/material/__init__.py +14 -14
- mat3ra/esse/models/materials_category/compound_pristine_structures/two_dimensional/interface/__init__.py +3 -0
- mat3ra/esse/models/materials_category/compound_pristine_structures/two_dimensional/interface/configuration.py +6039 -0
- mat3ra/esse/models/materials_category/defective_structures/one_dimensional/grain_boundary_linear/__init__.py +3 -0
- mat3ra/esse/models/materials_category/defective_structures/one_dimensional/grain_boundary_linear/configuration.py +6043 -0
- mat3ra/esse/models/materials_category/defective_structures/two_dimensional/__init__.py +3 -0
- mat3ra/esse/models/materials_category/defective_structures/two_dimensional/adatom/__init__.py +3 -0
- mat3ra/esse/models/materials_category/defective_structures/two_dimensional/adatom/configuration.py +2116 -0
- mat3ra/esse/models/materials_category/defective_structures/two_dimensional/base_configuration.py +1561 -0
- mat3ra/esse/models/materials_category/defective_structures/two_dimensional/grain_boundary_planar/__init__.py +3 -0
- mat3ra/esse/models/materials_category/defective_structures/two_dimensional/grain_boundary_planar/configuration.py +6039 -0
- mat3ra/esse/models/materials_category/defective_structures/two_dimensional/island/__init__.py +3 -0
- mat3ra/esse/models/materials_category/defective_structures/two_dimensional/island/configuration.py +2888 -0
- mat3ra/esse/models/materials_category/defective_structures/two_dimensional/terrace/__init__.py +3 -0
- mat3ra/esse/models/materials_category/defective_structures/two_dimensional/terrace/configuration.py +2892 -0
- mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/__init__.py +3 -0
- mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/base_configuration.py +544 -0
- mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/interstitial.py +1099 -0
- mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/substitutional.py +1099 -0
- mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/vacancy.py +556 -0
- mat3ra/esse/models/materials_category/pristine_structures/three_dimensional/ideal_crystal.py +14 -14
- mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/nanoribbon.py +1582 -0
- mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/nanotape.py +1148 -0
- mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/slab.py +78 -94
- mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/slab_strained_supercell.py +1147 -0
- mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/slab_strained_supercell_with_gap.py +1151 -0
- mat3ra/esse/models/materials_category/processed_structures/two_dimensional/passivation/__init__.py +3 -0
- mat3ra/esse/models/materials_category/processed_structures/two_dimensional/passivation/configuration.py +1232 -0
- mat3ra/esse/models/materials_category_components/entities/auxiliary/one_dimensional/__init__.py +3 -0
- mat3ra/esse/models/materials_category_components/entities/auxiliary/one_dimensional/miller_indices_2d.py +16 -0
- mat3ra/esse/models/materials_category_components/entities/auxiliary/zero_dimensional/crystal_site.py +527 -2
- mat3ra/esse/models/materials_category_components/entities/auxiliary/zero_dimensional/point_defect_site.py +676 -0
- mat3ra/esse/models/materials_category_components/entities/auxiliary/zero_dimensional/void_region.py +555 -0
- mat3ra/esse/models/materials_category_components/entities/auxiliary/zero_dimensional/void_site.py +1576 -0
- mat3ra/esse/models/materials_category_components/entities/core/three_dimensional/crystal.py +14 -14
- mat3ra/esse/models/materials_category_components/entities/core/two_dimensional/vacuum.py +14 -14
- mat3ra/esse/models/materials_category_components/entities/core/zero_dimensional/vacancy.py +22 -0
- mat3ra/esse/models/materials_category_components/entities/reusable/one_dimensional/__init__.py +3 -0
- mat3ra/esse/models/materials_category_components/entities/reusable/one_dimensional/crystal_lattice_base.py +541 -0
- mat3ra/esse/models/materials_category_components/entities/reusable/one_dimensional/crystal_lattice_lines.py +545 -0
- mat3ra/esse/models/materials_category_components/entities/reusable/one_dimensional/crystal_lattice_lines_unique_repeated.py +708 -0
- mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/crystal_lattice_base.py +541 -0
- mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/strained_non_uniform.py +14 -14
- mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/strained_uniform.py +14 -14
- mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/supercell.py +14 -14
- mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/atomic_layers.py +4 -4
- mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/atomic_layers_unique.py +4 -4
- mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/atomic_layers_unique_repeated.py +4 -4
- mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/crystal_lattice_planes.py +18 -18
- mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/slab_stack_configuration.py +1561 -0
- mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/slab_unit_cell.py +74 -77
- mat3ra/esse/models/materials_category_components/operations/core/combinations/enums.py +13 -0
- mat3ra/esse/models/materials_category_components/operations/core/combinations/merge.py +9 -981
- mat3ra/esse/models/materials_category_components/operations/core/combinations/stack.py +3 -947
- mat3ra/esse/models/materials_category_components/operations/core/modifications/perturb.py +538 -0
- mat3ra/esse/models/properties_directory/derived_properties.py +11 -11
- mat3ra/esse/models/properties_directory/non_scalar/density_of_states.py +2 -2
- mat3ra/esse/models/properties_directory/non_scalar/phonon_dispersions.py +2 -2
- mat3ra/esse/models/properties_directory/non_scalar/phonon_dos.py +2 -2
- mat3ra/esse/models/properties_directory/non_scalar/total_energy_contributions.py +50 -50
- mat3ra/esse/models/properties_directory/non_scalar/vibrational_spectrum.py +2 -2
- mat3ra/esse/models/properties_directory/scalar/electron_affinity.py +2 -2
- mat3ra/esse/models/properties_directory/scalar/fermi_energy.py +2 -2
- mat3ra/esse/models/properties_directory/scalar/formation_energy.py +2 -2
- mat3ra/esse/models/properties_directory/scalar/ionization_potential.py +2 -2
- mat3ra/esse/models/properties_directory/scalar/reaction_energy_barrier.py +2 -2
- mat3ra/esse/models/properties_directory/scalar/surface_energy.py +2 -2
- mat3ra/esse/models/properties_directory/scalar/total_energy.py +2 -2
- mat3ra/esse/models/properties_directory/scalar/valence_band_offset.py +2 -2
- mat3ra/esse/models/properties_directory/scalar/zero_point_energy.py +2 -2
- mat3ra/esse/models/properties_directory/structural/basis/__init__.py +2 -2
- mat3ra/esse/models/properties_directory/structural/molecular_pattern.py +4 -4
- mat3ra/esse/models/properties_directory/workflow/convergence/ionic.py +2 -2
- mat3ra/esse/models/software/flavor.py +4 -0
- mat3ra/esse/models/software_directory/ml/unit/execution/__init__.py +16 -0
- mat3ra/esse/models/software_directory/ml/unit/execution/evaluate/cross_validate.py +4 -0
- mat3ra/esse/models/software_directory/ml/unit/execution/initialize.py +4 -0
- mat3ra/esse/models/software_directory/ml/unit/execution/score.py +4 -0
- mat3ra/esse/models/software_directory/ml/unit/execution/train.py +4 -0
- mat3ra/esse/models/software_directory/modeling/unit/execution.py +4 -0
- mat3ra/esse/models/software_directory/scripting/unit/execution.py +4 -0
- mat3ra/esse/models/workflow/__init__.py +8 -0
- mat3ra/esse/models/workflow/subworkflow/__init__.py +4 -0
- mat3ra/esse/models/workflow/subworkflow/unit.py +4 -0
- mat3ra/esse/models/workflow/unit/__init__.py +4 -0
- mat3ra/esse/models/workflow/unit/execution.py +4 -0
- {mat3ra_esse-2025.7.1.post0.dist-info → mat3ra_esse-2025.7.29.post0.dist-info}/METADATA +5 -5
- {mat3ra_esse-2025.7.1.post0.dist-info → mat3ra_esse-2025.7.29.post0.dist-info}/RECORD +99 -58
- {mat3ra_esse-2025.7.1.post0.dist-info → mat3ra_esse-2025.7.29.post0.dist-info}/WHEEL +0 -0
- {mat3ra_esse-2025.7.1.post0.dist-info → mat3ra_esse-2025.7.29.post0.dist-info}/licenses/LICENSE.md +0 -0
- {mat3ra_esse-2025.7.1.post0.dist-info → mat3ra_esse-2025.7.29.post0.dist-info}/top_level.txt +0 -0
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class Name802(Enum):
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harris_foulkes = "harris_foulkes"
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class ScalarSchema97(BaseModel):
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name: Optional[Name802] = None
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class Name803(Enum):
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class ScalarSchema98(BaseModel):
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name: Optional[Name803] = None
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class Name804(Enum):
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hartree = "hartree"
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class ScalarSchema99(BaseModel):
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name: Optional[Name804] = None
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class Name805(Enum):
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class ScalarSchema100(BaseModel):
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name: Optional[Name805] = None
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product of temperature and configurational entropy
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class SurfaceEnergySchema(BaseModel):
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class ValenceBandOffsetSchema(BaseModel):
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class ZeroPointEnergySchema(BaseModel):
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@@ -131,13 +131,13 @@ class Value(Enum):
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class Value15(Enum):
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class AtomicElementSchema(BaseModel):
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"""
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All elements, including extra elements
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"""
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@@ -37,12 +37,12 @@ class FunctionalGroupPatternSchema(BaseModel):
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"""
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class
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class Name614(Enum):
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|
ring = "ring"
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class RingPatternSchema(BaseModel):
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name: Optional[
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|
"""
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array of objects containing integer id each
|
|
@@ -50,12 +50,12 @@ class RingPatternSchema(BaseModel):
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class
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|
class SpecialBondPatternSchema(BaseModel):
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@@ -18,14 +18,14 @@ class Units(Enum):
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class
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"""
|
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units for force tolerance
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|
"""
|
|
@@ -44,6 +44,10 @@ class FlavorSchema(BaseModel):
|
|
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44
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|
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|
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|
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|
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)
|
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+
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|
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+
"""
|
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+
list of application versions this flavor supports
|
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+
"""
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|
field_id: Optional[str] = Field(None, alias="_id")
|
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|
"""
|
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|
entity identity
|
|
@@ -155,6 +155,10 @@ class FlavorSchema(BaseModel):
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)
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|
+
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|
+
"""
|
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+
list of application versions this flavor supports
|
|
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|
+
"""
|
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|
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|
"""
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|
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|
|
@@ -364,6 +368,10 @@ class FlavorSchema5(BaseModel):
|
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364
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|
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|
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365
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|
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|
)
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|
+
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|
+
"""
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|
+
list of application versions this flavor supports
|
|
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|
+
"""
|
|
367
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|
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|
|
368
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|
"""
|
|
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|
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|
|
@@ -548,6 +556,10 @@ class FlavorSchema6(BaseModel):
|
|
|
548
556
|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
549
557
|
None, title="execution unit input schema"
|
|
550
558
|
)
|
|
559
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
560
|
+
"""
|
|
561
|
+
list of application versions this flavor supports
|
|
562
|
+
"""
|
|
551
563
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
552
564
|
"""
|
|
553
565
|
entity identity
|
|
@@ -739,6 +751,10 @@ class FlavorSchema7(BaseModel):
|
|
|
739
751
|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
740
752
|
None, title="execution unit input schema"
|
|
741
753
|
)
|
|
754
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
755
|
+
"""
|
|
756
|
+
list of application versions this flavor supports
|
|
757
|
+
"""
|
|
742
758
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
743
759
|
"""
|
|
744
760
|
entity identity
|
|
@@ -155,6 +155,10 @@ class FlavorSchema(BaseModel):
|
|
|
155
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|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
156
156
|
None, title="execution unit input schema"
|
|
157
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|
)
|
|
158
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
159
|
+
"""
|
|
160
|
+
list of application versions this flavor supports
|
|
161
|
+
"""
|
|
158
162
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
159
163
|
"""
|
|
160
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|
entity identity
|
|
@@ -155,6 +155,10 @@ class FlavorSchema(BaseModel):
|
|
|
155
155
|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
156
156
|
None, title="execution unit input schema"
|
|
157
157
|
)
|
|
158
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
159
|
+
"""
|
|
160
|
+
list of application versions this flavor supports
|
|
161
|
+
"""
|
|
158
162
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
159
163
|
"""
|
|
160
164
|
entity identity
|
|
@@ -148,6 +148,10 @@ class FlavorSchema(BaseModel):
|
|
|
148
148
|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
149
149
|
None, title="execution unit input schema"
|
|
150
150
|
)
|
|
151
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
152
|
+
"""
|
|
153
|
+
list of application versions this flavor supports
|
|
154
|
+
"""
|
|
151
155
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
152
156
|
"""
|
|
153
157
|
entity identity
|
|
@@ -159,6 +159,10 @@ class FlavorSchema(BaseModel):
|
|
|
159
159
|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
160
160
|
None, title="execution unit input schema"
|
|
161
161
|
)
|
|
162
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
163
|
+
"""
|
|
164
|
+
list of application versions this flavor supports
|
|
165
|
+
"""
|
|
162
166
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
163
167
|
"""
|
|
164
168
|
entity identity
|
|
@@ -148,6 +148,10 @@ class FlavorSchema(BaseModel):
|
|
|
148
148
|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
149
149
|
None, title="execution unit input schema"
|
|
150
150
|
)
|
|
151
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
152
|
+
"""
|
|
153
|
+
list of application versions this flavor supports
|
|
154
|
+
"""
|
|
151
155
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
152
156
|
"""
|
|
153
157
|
entity identity
|
|
@@ -148,6 +148,10 @@ class FlavorSchema(BaseModel):
|
|
|
148
148
|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
149
149
|
None, title="execution unit input schema"
|
|
150
150
|
)
|
|
151
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
152
|
+
"""
|
|
153
|
+
list of application versions this flavor supports
|
|
154
|
+
"""
|
|
151
155
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
152
156
|
"""
|
|
153
157
|
entity identity
|
|
@@ -649,6 +649,10 @@ class FlavorSchema(BaseModel):
|
|
|
649
649
|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
650
650
|
None, title="execution unit input schema"
|
|
651
651
|
)
|
|
652
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
653
|
+
"""
|
|
654
|
+
list of application versions this flavor supports
|
|
655
|
+
"""
|
|
652
656
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
653
657
|
"""
|
|
654
658
|
entity identity
|
|
@@ -1664,6 +1668,10 @@ class FlavorSchema18(BaseModel):
|
|
|
1664
1668
|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
1665
1669
|
None, title="execution unit input schema"
|
|
1666
1670
|
)
|
|
1671
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
1672
|
+
"""
|
|
1673
|
+
list of application versions this flavor supports
|
|
1674
|
+
"""
|
|
1667
1675
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
1668
1676
|
"""
|
|
1669
1677
|
entity identity
|
|
@@ -649,6 +649,10 @@ class FlavorSchema(BaseModel):
|
|
|
649
649
|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
650
650
|
None, title="execution unit input schema"
|
|
651
651
|
)
|
|
652
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
653
|
+
"""
|
|
654
|
+
list of application versions this flavor supports
|
|
655
|
+
"""
|
|
652
656
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
653
657
|
"""
|
|
654
658
|
entity identity
|
|
@@ -649,6 +649,10 @@ class FlavorSchema(BaseModel):
|
|
|
649
649
|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
650
650
|
None, title="execution unit input schema"
|
|
651
651
|
)
|
|
652
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
653
|
+
"""
|
|
654
|
+
list of application versions this flavor supports
|
|
655
|
+
"""
|
|
652
656
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
653
657
|
"""
|
|
654
658
|
entity identity
|
|
@@ -649,6 +649,10 @@ class FlavorSchema(BaseModel):
|
|
|
649
649
|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
650
650
|
None, title="execution unit input schema"
|
|
651
651
|
)
|
|
652
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
653
|
+
"""
|
|
654
|
+
list of application versions this flavor supports
|
|
655
|
+
"""
|
|
652
656
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
653
657
|
"""
|
|
654
658
|
entity identity
|
|
@@ -148,6 +148,10 @@ class FlavorSchema(BaseModel):
|
|
|
148
148
|
input: Optional[List[ExecutionUnitInputIdItemSchemaForPhysicsBasedSimulationEngines]] = Field(
|
|
149
149
|
None, title="execution unit input schema"
|
|
150
150
|
)
|
|
151
|
+
supportedApplicationVersions: Optional[List[str]] = None
|
|
152
|
+
"""
|
|
153
|
+
list of application versions this flavor supports
|
|
154
|
+
"""
|
|
151
155
|
field_id: Optional[str] = Field(None, alias="_id")
|
|
152
156
|
"""
|
|
153
157
|
entity identity
|