mat3ra-esse 2025.7.1.post0__py3-none-any.whl → 2025.7.29.post0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.


This version of mat3ra-esse might be problematic. Click here for more details.

Files changed (99) hide show
  1. mat3ra/esse/data/examples.py +1 -1
  2. mat3ra/esse/data/schemas.py +1 -1
  3. mat3ra/esse/models/apse/file/applications/espresso/7.2/pw_x.py +6 -6
  4. mat3ra/esse/models/core/abstract/vector_2d.py +13 -0
  5. mat3ra/esse/models/core/primitive/array_of_2_numbers.py +13 -0
  6. mat3ra/esse/models/core/reusable/energy.py +2 -2
  7. mat3ra/esse/models/element.py +6 -6
  8. mat3ra/esse/models/job/__init__.py +8 -0
  9. mat3ra/esse/models/material/__init__.py +14 -14
  10. mat3ra/esse/models/materials_category/compound_pristine_structures/two_dimensional/interface/__init__.py +3 -0
  11. mat3ra/esse/models/materials_category/compound_pristine_structures/two_dimensional/interface/configuration.py +6039 -0
  12. mat3ra/esse/models/materials_category/defective_structures/one_dimensional/grain_boundary_linear/__init__.py +3 -0
  13. mat3ra/esse/models/materials_category/defective_structures/one_dimensional/grain_boundary_linear/configuration.py +6043 -0
  14. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/__init__.py +3 -0
  15. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/adatom/__init__.py +3 -0
  16. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/adatom/configuration.py +2116 -0
  17. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/base_configuration.py +1561 -0
  18. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/grain_boundary_planar/__init__.py +3 -0
  19. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/grain_boundary_planar/configuration.py +6039 -0
  20. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/island/__init__.py +3 -0
  21. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/island/configuration.py +2888 -0
  22. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/terrace/__init__.py +3 -0
  23. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/terrace/configuration.py +2892 -0
  24. mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/__init__.py +3 -0
  25. mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/base_configuration.py +544 -0
  26. mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/interstitial.py +1099 -0
  27. mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/substitutional.py +1099 -0
  28. mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/vacancy.py +556 -0
  29. mat3ra/esse/models/materials_category/pristine_structures/three_dimensional/ideal_crystal.py +14 -14
  30. mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/nanoribbon.py +1582 -0
  31. mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/nanotape.py +1148 -0
  32. mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/slab.py +78 -94
  33. mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/slab_strained_supercell.py +1147 -0
  34. mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/slab_strained_supercell_with_gap.py +1151 -0
  35. mat3ra/esse/models/materials_category/processed_structures/two_dimensional/passivation/__init__.py +3 -0
  36. mat3ra/esse/models/materials_category/processed_structures/two_dimensional/passivation/configuration.py +1232 -0
  37. mat3ra/esse/models/materials_category_components/entities/auxiliary/one_dimensional/__init__.py +3 -0
  38. mat3ra/esse/models/materials_category_components/entities/auxiliary/one_dimensional/miller_indices_2d.py +16 -0
  39. mat3ra/esse/models/materials_category_components/entities/auxiliary/zero_dimensional/crystal_site.py +527 -2
  40. mat3ra/esse/models/materials_category_components/entities/auxiliary/zero_dimensional/point_defect_site.py +676 -0
  41. mat3ra/esse/models/materials_category_components/entities/auxiliary/zero_dimensional/void_region.py +555 -0
  42. mat3ra/esse/models/materials_category_components/entities/auxiliary/zero_dimensional/void_site.py +1576 -0
  43. mat3ra/esse/models/materials_category_components/entities/core/three_dimensional/crystal.py +14 -14
  44. mat3ra/esse/models/materials_category_components/entities/core/two_dimensional/vacuum.py +14 -14
  45. mat3ra/esse/models/materials_category_components/entities/core/zero_dimensional/vacancy.py +22 -0
  46. mat3ra/esse/models/materials_category_components/entities/reusable/one_dimensional/__init__.py +3 -0
  47. mat3ra/esse/models/materials_category_components/entities/reusable/one_dimensional/crystal_lattice_base.py +541 -0
  48. mat3ra/esse/models/materials_category_components/entities/reusable/one_dimensional/crystal_lattice_lines.py +545 -0
  49. mat3ra/esse/models/materials_category_components/entities/reusable/one_dimensional/crystal_lattice_lines_unique_repeated.py +708 -0
  50. mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/crystal_lattice_base.py +541 -0
  51. mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/strained_non_uniform.py +14 -14
  52. mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/strained_uniform.py +14 -14
  53. mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/supercell.py +14 -14
  54. mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/atomic_layers.py +4 -4
  55. mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/atomic_layers_unique.py +4 -4
  56. mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/atomic_layers_unique_repeated.py +4 -4
  57. mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/crystal_lattice_planes.py +18 -18
  58. mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/slab_stack_configuration.py +1561 -0
  59. mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/slab_unit_cell.py +74 -77
  60. mat3ra/esse/models/materials_category_components/operations/core/combinations/enums.py +13 -0
  61. mat3ra/esse/models/materials_category_components/operations/core/combinations/merge.py +9 -981
  62. mat3ra/esse/models/materials_category_components/operations/core/combinations/stack.py +3 -947
  63. mat3ra/esse/models/materials_category_components/operations/core/modifications/perturb.py +538 -0
  64. mat3ra/esse/models/properties_directory/derived_properties.py +11 -11
  65. mat3ra/esse/models/properties_directory/non_scalar/density_of_states.py +2 -2
  66. mat3ra/esse/models/properties_directory/non_scalar/phonon_dispersions.py +2 -2
  67. mat3ra/esse/models/properties_directory/non_scalar/phonon_dos.py +2 -2
  68. mat3ra/esse/models/properties_directory/non_scalar/total_energy_contributions.py +50 -50
  69. mat3ra/esse/models/properties_directory/non_scalar/vibrational_spectrum.py +2 -2
  70. mat3ra/esse/models/properties_directory/scalar/electron_affinity.py +2 -2
  71. mat3ra/esse/models/properties_directory/scalar/fermi_energy.py +2 -2
  72. mat3ra/esse/models/properties_directory/scalar/formation_energy.py +2 -2
  73. mat3ra/esse/models/properties_directory/scalar/ionization_potential.py +2 -2
  74. mat3ra/esse/models/properties_directory/scalar/reaction_energy_barrier.py +2 -2
  75. mat3ra/esse/models/properties_directory/scalar/surface_energy.py +2 -2
  76. mat3ra/esse/models/properties_directory/scalar/total_energy.py +2 -2
  77. mat3ra/esse/models/properties_directory/scalar/valence_band_offset.py +2 -2
  78. mat3ra/esse/models/properties_directory/scalar/zero_point_energy.py +2 -2
  79. mat3ra/esse/models/properties_directory/structural/basis/__init__.py +2 -2
  80. mat3ra/esse/models/properties_directory/structural/molecular_pattern.py +4 -4
  81. mat3ra/esse/models/properties_directory/workflow/convergence/ionic.py +2 -2
  82. mat3ra/esse/models/software/flavor.py +4 -0
  83. mat3ra/esse/models/software_directory/ml/unit/execution/__init__.py +16 -0
  84. mat3ra/esse/models/software_directory/ml/unit/execution/evaluate/cross_validate.py +4 -0
  85. mat3ra/esse/models/software_directory/ml/unit/execution/initialize.py +4 -0
  86. mat3ra/esse/models/software_directory/ml/unit/execution/score.py +4 -0
  87. mat3ra/esse/models/software_directory/ml/unit/execution/train.py +4 -0
  88. mat3ra/esse/models/software_directory/modeling/unit/execution.py +4 -0
  89. mat3ra/esse/models/software_directory/scripting/unit/execution.py +4 -0
  90. mat3ra/esse/models/workflow/__init__.py +8 -0
  91. mat3ra/esse/models/workflow/subworkflow/__init__.py +4 -0
  92. mat3ra/esse/models/workflow/subworkflow/unit.py +4 -0
  93. mat3ra/esse/models/workflow/unit/__init__.py +4 -0
  94. mat3ra/esse/models/workflow/unit/execution.py +4 -0
  95. {mat3ra_esse-2025.7.1.post0.dist-info → mat3ra_esse-2025.7.29.post0.dist-info}/METADATA +5 -5
  96. {mat3ra_esse-2025.7.1.post0.dist-info → mat3ra_esse-2025.7.29.post0.dist-info}/RECORD +99 -58
  97. {mat3ra_esse-2025.7.1.post0.dist-info → mat3ra_esse-2025.7.29.post0.dist-info}/WHEEL +0 -0
  98. {mat3ra_esse-2025.7.1.post0.dist-info → mat3ra_esse-2025.7.29.post0.dist-info}/licenses/LICENSE.md +0 -0
  99. {mat3ra_esse-2025.7.1.post0.dist-info → mat3ra_esse-2025.7.29.post0.dist-info}/top_level.txt +0 -0
@@ -0,0 +1,708 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: materials_category_components/entities/reusable/one_dimensional/crystal_lattice_lines_unique_repeated.json
3
+ # version: 0.28.5
4
+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+ from typing import Any, Dict, List, Literal, Optional, Union
9
+
10
+ from pydantic import BaseModel, Field, RootModel, confloat, conint, constr
11
+
12
+
13
+ class ChemicalElements(Enum):
14
+ H = "H"
15
+ He = "He"
16
+ Li = "Li"
17
+ Be = "Be"
18
+ B = "B"
19
+ C = "C"
20
+ N = "N"
21
+ O = "O"
22
+ F = "F"
23
+ Ne = "Ne"
24
+ Na = "Na"
25
+ Mg = "Mg"
26
+ Al = "Al"
27
+ Si = "Si"
28
+ P = "P"
29
+ S = "S"
30
+ Cl = "Cl"
31
+ Ar = "Ar"
32
+ K = "K"
33
+ Ca = "Ca"
34
+ Sc = "Sc"
35
+ Ti = "Ti"
36
+ V = "V"
37
+ Cr = "Cr"
38
+ Mn = "Mn"
39
+ Fe = "Fe"
40
+ Co = "Co"
41
+ Ni = "Ni"
42
+ Cu = "Cu"
43
+ Zn = "Zn"
44
+ Ga = "Ga"
45
+ Ge = "Ge"
46
+ As = "As"
47
+ Se = "Se"
48
+ Br = "Br"
49
+ Kr = "Kr"
50
+ Rb = "Rb"
51
+ Sr = "Sr"
52
+ Y = "Y"
53
+ Zr = "Zr"
54
+ Nb = "Nb"
55
+ Mo = "Mo"
56
+ Tc = "Tc"
57
+ Ru = "Ru"
58
+ Rh = "Rh"
59
+ Pd = "Pd"
60
+ Ag = "Ag"
61
+ Cd = "Cd"
62
+ In = "In"
63
+ Sn = "Sn"
64
+ Sb = "Sb"
65
+ Te = "Te"
66
+ I = "I"
67
+ Xe = "Xe"
68
+ Cs = "Cs"
69
+ Ba = "Ba"
70
+ La = "La"
71
+ Ce = "Ce"
72
+ Pr = "Pr"
73
+ Nd = "Nd"
74
+ Pm = "Pm"
75
+ Sm = "Sm"
76
+ Eu = "Eu"
77
+ Gd = "Gd"
78
+ Tb = "Tb"
79
+ Dy = "Dy"
80
+ Ho = "Ho"
81
+ Er = "Er"
82
+ Tm = "Tm"
83
+ Yb = "Yb"
84
+ Lu = "Lu"
85
+ Hf = "Hf"
86
+ Ta = "Ta"
87
+ W = "W"
88
+ Re = "Re"
89
+ Os = "Os"
90
+ Ir = "Ir"
91
+ Pt = "Pt"
92
+ Au = "Au"
93
+ Hg = "Hg"
94
+ Tl = "Tl"
95
+ Pb = "Pb"
96
+ Bi = "Bi"
97
+ Po = "Po"
98
+ At = "At"
99
+ Rn = "Rn"
100
+ Fr = "Fr"
101
+ Ra = "Ra"
102
+ Ac = "Ac"
103
+ Th = "Th"
104
+ Pa = "Pa"
105
+ U = "U"
106
+ Np = "Np"
107
+ Pu = "Pu"
108
+ Am = "Am"
109
+ Cm = "Cm"
110
+ Bk = "Bk"
111
+ Cf = "Cf"
112
+ Es = "Es"
113
+ Fm = "Fm"
114
+ Md = "Md"
115
+ No = "No"
116
+ Lr = "Lr"
117
+ Rf = "Rf"
118
+ Db = "Db"
119
+ Sg = "Sg"
120
+ Bh = "Bh"
121
+ Hs = "Hs"
122
+ Mt = "Mt"
123
+ Ds = "Ds"
124
+ Rg = "Rg"
125
+ Cn = "Cn"
126
+ Nh = "Nh"
127
+ Fl = "Fl"
128
+ Mc = "Mc"
129
+ Lv = "Lv"
130
+ Ts = "Ts"
131
+ Og = "Og"
132
+
133
+
134
+ class TerminationSchema(BaseModel):
135
+ chemical_elements: Union[ChemicalElements, constr(pattern=r"^([A-Z][a-z]?[0-9]*)+$")] = Field(
136
+ ..., title="Chemical Elements"
137
+ )
138
+ """
139
+ Chemical elements at the termination. Can be a single element (e.g. 'Si') or a compound (e.g. 'SiO')
140
+ """
141
+ space_group_symmetry_label: str = Field(..., title="Space Group Symmetry Label")
142
+ """
143
+ Space group symmetry designation for the termination
144
+ """
145
+
146
+
147
+ class TerminationSchema27(BaseModel):
148
+ chemical_elements: Union[ChemicalElements, constr(pattern=r"^([A-Z][a-z]?[0-9]*)+$")] = Field(
149
+ ..., title="Chemical Elements"
150
+ )
151
+ """
152
+ Chemical elements at the termination. Can be a single element (e.g. 'Si') or a compound (e.g. 'SiO')
153
+ """
154
+ space_group_symmetry_label: str = Field(..., title="Space Group Symmetry Label")
155
+ """
156
+ Space group symmetry designation for the termination
157
+ """
158
+
159
+
160
+ class Value(Enum):
161
+ H = "H"
162
+ He = "He"
163
+ Li = "Li"
164
+ Be = "Be"
165
+ B = "B"
166
+ C = "C"
167
+ N = "N"
168
+ O = "O"
169
+ F = "F"
170
+ Ne = "Ne"
171
+ Na = "Na"
172
+ Mg = "Mg"
173
+ Al = "Al"
174
+ Si = "Si"
175
+ P = "P"
176
+ S = "S"
177
+ Cl = "Cl"
178
+ Ar = "Ar"
179
+ K = "K"
180
+ Ca = "Ca"
181
+ Sc = "Sc"
182
+ Ti = "Ti"
183
+ V = "V"
184
+ Cr = "Cr"
185
+ Mn = "Mn"
186
+ Fe = "Fe"
187
+ Co = "Co"
188
+ Ni = "Ni"
189
+ Cu = "Cu"
190
+ Zn = "Zn"
191
+ Ga = "Ga"
192
+ Ge = "Ge"
193
+ As = "As"
194
+ Se = "Se"
195
+ Br = "Br"
196
+ Kr = "Kr"
197
+ Rb = "Rb"
198
+ Sr = "Sr"
199
+ Y = "Y"
200
+ Zr = "Zr"
201
+ Nb = "Nb"
202
+ Mo = "Mo"
203
+ Tc = "Tc"
204
+ Ru = "Ru"
205
+ Rh = "Rh"
206
+ Pd = "Pd"
207
+ Ag = "Ag"
208
+ Cd = "Cd"
209
+ In = "In"
210
+ Sn = "Sn"
211
+ Sb = "Sb"
212
+ Te = "Te"
213
+ I = "I"
214
+ Xe = "Xe"
215
+ Cs = "Cs"
216
+ Ba = "Ba"
217
+ La = "La"
218
+ Ce = "Ce"
219
+ Pr = "Pr"
220
+ Nd = "Nd"
221
+ Pm = "Pm"
222
+ Sm = "Sm"
223
+ Eu = "Eu"
224
+ Gd = "Gd"
225
+ Tb = "Tb"
226
+ Dy = "Dy"
227
+ Ho = "Ho"
228
+ Er = "Er"
229
+ Tm = "Tm"
230
+ Yb = "Yb"
231
+ Lu = "Lu"
232
+ Hf = "Hf"
233
+ Ta = "Ta"
234
+ W = "W"
235
+ Re = "Re"
236
+ Os = "Os"
237
+ Ir = "Ir"
238
+ Pt = "Pt"
239
+ Au = "Au"
240
+ Hg = "Hg"
241
+ Tl = "Tl"
242
+ Pb = "Pb"
243
+ Bi = "Bi"
244
+ Po = "Po"
245
+ At = "At"
246
+ Rn = "Rn"
247
+ Fr = "Fr"
248
+ Ra = "Ra"
249
+ Ac = "Ac"
250
+ Th = "Th"
251
+ Pa = "Pa"
252
+ U = "U"
253
+ Np = "Np"
254
+ Pu = "Pu"
255
+ Am = "Am"
256
+ Cm = "Cm"
257
+ Bk = "Bk"
258
+ Cf = "Cf"
259
+ Es = "Es"
260
+ Fm = "Fm"
261
+ Md = "Md"
262
+ No = "No"
263
+ Lr = "Lr"
264
+ Rf = "Rf"
265
+ Db = "Db"
266
+ Sg = "Sg"
267
+ Bh = "Bh"
268
+ Hs = "Hs"
269
+ Mt = "Mt"
270
+ Ds = "Ds"
271
+ Rg = "Rg"
272
+ Cn = "Cn"
273
+ Nh = "Nh"
274
+ Fl = "Fl"
275
+ Mc = "Mc"
276
+ Lv = "Lv"
277
+ Ts = "Ts"
278
+ Og = "Og"
279
+
280
+
281
+ class Value137(Enum):
282
+ X = "X"
283
+ Vac = "Vac"
284
+
285
+
286
+ class AtomicElementSchema(BaseModel):
287
+ value: Union[Value, Value137]
288
+ """
289
+ All elements, including extra elements
290
+ """
291
+ id: int
292
+ """
293
+ integer id of this entry
294
+ """
295
+
296
+
297
+ class AtomicCoordinateSchema(BaseModel):
298
+ value: List[float] = Field(..., max_length=3, min_length=3, title="coordinate 3d schema")
299
+ """
300
+ value of this entry
301
+ """
302
+ id: int
303
+ """
304
+ integer id of this entry
305
+ """
306
+
307
+
308
+ class BasisUnitsEnum(Enum):
309
+ crystal = "crystal"
310
+ cartesian = "cartesian"
311
+
312
+
313
+ class AtomicLabelSchema(BaseModel):
314
+ value: Union[Union[int, str, float], conint(ge=1, le=9)]
315
+ """
316
+ value of this entry
317
+ """
318
+ id: int
319
+ """
320
+ integer id of this entry
321
+ """
322
+
323
+
324
+ class BasisSchema(BaseModel):
325
+ elements: List[AtomicElementSchema] = Field(..., title="atomic elements schema")
326
+ """
327
+ atomic elements schema
328
+ """
329
+ coordinates: List[AtomicCoordinateSchema] = Field(..., title="atomic coordinates schema")
330
+ """
331
+ atomic coordinates schema
332
+ """
333
+ units: Optional[BasisUnitsEnum] = Field("crystal", title="basis units enum")
334
+ labels: Optional[List[AtomicLabelSchema]] = Field(None, title="atomic labels schema")
335
+ """
336
+ atomic labels schema
337
+ """
338
+
339
+
340
+ class LatticeVectorsUnitsEnum(Enum):
341
+ angstrom = "angstrom"
342
+ bohr = "bohr"
343
+
344
+
345
+ class LatticeVectorsSchema(BaseModel):
346
+ a: List[float] = Field(..., max_length=3, min_length=3, title="vector 3d schema")
347
+ b: List[float] = Field(..., max_length=3, min_length=3, title="vector 3d schema")
348
+ c: List[float] = Field(..., max_length=3, min_length=3, title="vector 3d schema")
349
+ alat: Optional[float] = 1
350
+ """
351
+ lattice parameter for fractional coordinates
352
+ """
353
+ units: Optional[LatticeVectorsUnitsEnum] = Field("angstrom", title="lattice vectors units enum")
354
+
355
+
356
+ class LatticeTypeEnum(Enum):
357
+ CUB = "CUB"
358
+ BCC = "BCC"
359
+ FCC = "FCC"
360
+ TET = "TET"
361
+ MCL = "MCL"
362
+ ORC = "ORC"
363
+ ORCC = "ORCC"
364
+ ORCF = "ORCF"
365
+ ORCI = "ORCI"
366
+ HEX = "HEX"
367
+ BCT = "BCT"
368
+ TRI = "TRI"
369
+ MCLC = "MCLC"
370
+ RHL = "RHL"
371
+
372
+
373
+ class LatticeUnitsLengthEnum(Enum):
374
+ angstrom = "angstrom"
375
+ bohr = "bohr"
376
+
377
+
378
+ class LatticeUnitsAngleEnum(Enum):
379
+ degree = "degree"
380
+ radian = "radian"
381
+
382
+
383
+ class LatticeUnitsSchema(BaseModel):
384
+ length: Optional[LatticeUnitsLengthEnum] = Field("angstrom", title="lattice units length enum")
385
+ angle: Optional[LatticeUnitsAngleEnum] = Field("degree", title="lattice units angle enum")
386
+
387
+
388
+ class LatticeSchema(BaseModel):
389
+ a: float
390
+ """
391
+ length of the first lattice vector
392
+ """
393
+ b: float
394
+ """
395
+ length of the second lattice vector
396
+ """
397
+ c: float
398
+ """
399
+ length of the third lattice vector
400
+ """
401
+ alpha: float
402
+ """
403
+ angle between first and second lattice vector
404
+ """
405
+ beta: float
406
+ """
407
+ angle between second and third lattice vector
408
+ """
409
+ gamma: float
410
+ """
411
+ angle between first and third lattice vector
412
+ """
413
+ vectors: Optional[LatticeVectorsSchema] = Field(None, title="lattice vectors schema")
414
+ type: Optional[LatticeTypeEnum] = Field("TRI", title="lattice type enum")
415
+ units: Optional[LatticeUnitsSchema] = Field(
416
+ default_factory=lambda: LatticeUnitsSchema.model_validate({"length": "angstrom", "angle": "degree"}),
417
+ title="Lattice units schema",
418
+ )
419
+
420
+
421
+ class Name(Enum):
422
+ volume = "volume"
423
+
424
+
425
+ class Units(Enum):
426
+ angstrom_3 = "angstrom^3"
427
+
428
+
429
+ class VolumeSchema(BaseModel):
430
+ name: Literal["0#-datamodel-code-generator-#-object-#-special-#"]
431
+ units: Optional[Units] = None
432
+ value: float
433
+
434
+
435
+ class Name521(Enum):
436
+ density = "density"
437
+
438
+
439
+ class Units202(Enum):
440
+ g_cm_3 = "g/cm^3"
441
+
442
+
443
+ class DensitySchema(BaseModel):
444
+ name: Literal["1#-datamodel-code-generator-#-object-#-special-#"]
445
+ units: Optional[Units202] = None
446
+ value: float
447
+
448
+
449
+ class Units203(Enum):
450
+ angstrom = "angstrom"
451
+
452
+
453
+ class ScalarSchema(BaseModel):
454
+ units: Optional[Units203] = None
455
+ value: float
456
+
457
+
458
+ class Name522(Enum):
459
+ symmetry = "symmetry"
460
+
461
+
462
+ class SymmetrySchema(BaseModel):
463
+ pointGroupSymbol: Optional[str] = None
464
+ """
465
+ point group symbol in Schoenflies notation
466
+ """
467
+ spaceGroupSymbol: Optional[str] = None
468
+ """
469
+ space group symbol in Hermann–Mauguin notation
470
+ """
471
+ tolerance: Optional[ScalarSchema] = Field(None, title="scalar schema")
472
+ """
473
+ tolerance used for symmetry calculation
474
+ """
475
+ name: Literal["2#-datamodel-code-generator-#-object-#-special-#"]
476
+
477
+
478
+ class Name523(Enum):
479
+ elemental_ratio = "elemental_ratio"
480
+
481
+
482
+ class ElementalRatio(BaseModel):
483
+ name: Literal["3#-datamodel-code-generator-#-object-#-special-#"]
484
+ value: confloat(ge=0.0, le=1.0)
485
+ element: Optional[str] = None
486
+ """
487
+ the element this ratio is for
488
+ """
489
+
490
+
491
+ class Name524(Enum):
492
+ p_norm = "p-norm"
493
+
494
+
495
+ class PNorm(BaseModel):
496
+ name: Literal["4#-datamodel-code-generator-#-object-#-special-#"]
497
+ degree: Optional[int] = None
498
+ """
499
+ degree of the dimensionality of the norm
500
+ """
501
+ value: float
502
+
503
+
504
+ class Name525(Enum):
505
+ inchi = "inchi"
506
+
507
+
508
+ class InChIRepresentationSchema(BaseModel):
509
+ name: Literal["5#-datamodel-code-generator-#-object-#-special-#"]
510
+ value: str
511
+
512
+
513
+ class Name526(Enum):
514
+ inchi_key = "inchi_key"
515
+
516
+
517
+ class InChIKeyRepresentationSchema(BaseModel):
518
+ name: Literal["6#-datamodel-code-generator-#-object-#-special-#"]
519
+ value: str
520
+
521
+
522
+ class DerivedPropertiesSchema(
523
+ RootModel[
524
+ Union[
525
+ VolumeSchema,
526
+ DensitySchema,
527
+ SymmetrySchema,
528
+ ElementalRatio,
529
+ PNorm,
530
+ InChIRepresentationSchema,
531
+ InChIKeyRepresentationSchema,
532
+ ]
533
+ ]
534
+ ):
535
+ root: Union[
536
+ VolumeSchema,
537
+ DensitySchema,
538
+ SymmetrySchema,
539
+ ElementalRatio,
540
+ PNorm,
541
+ InChIRepresentationSchema,
542
+ InChIKeyRepresentationSchema,
543
+ ] = Field(..., discriminator="name")
544
+
545
+
546
+ class DatabaseSourceSchema(BaseModel):
547
+ id: Union[str, float]
548
+ """
549
+ ID string for the materials uploaded from a third party source inside the third party source. For materialsproject.org an example ID is mp-32
550
+ """
551
+ source: str
552
+ """
553
+ Third party source name, e.g. materials project, 2dmatpedia, ICSD, etc.
554
+ """
555
+ origin: bool
556
+ """
557
+ Deprecated. To be removed. A flag that is true when material is initially imported from a third party * (as opposed to being independently designed from scratch).
558
+ """
559
+ data: Optional[Dict[str, Any]] = None
560
+ """
561
+ Original response from external source.
562
+ """
563
+ doi: Optional[str] = None
564
+ """
565
+ Digital Object Identifier, e.g. 10.1088/0953-8984/25/10/105506
566
+ """
567
+ url: Optional[str] = None
568
+ """
569
+ The URL of the original record, e.g. https://next-gen.materialsproject.org/materials/mp-48; ToDo: update to use URI type per https://json-schema.org/understanding-json-schema/reference/string#resource-identifiers
570
+ """
571
+
572
+
573
+ class FileSourceSchema(BaseModel):
574
+ extension: Optional[str] = None
575
+ """
576
+ file extension
577
+ """
578
+ filename: str
579
+ """
580
+ file name without extension
581
+ """
582
+ text: str
583
+ """
584
+ file content as raw text
585
+ """
586
+ hash: str
587
+ """
588
+ MD5 hash based on file content
589
+ """
590
+
591
+
592
+ class Name527(Enum):
593
+ default = "default"
594
+ atomsTooClose = "atomsTooClose"
595
+ atomsOverlap = "atomsOverlap"
596
+
597
+
598
+ class Severity(Enum):
599
+ info = "info"
600
+ warning = "warning"
601
+ error = "error"
602
+
603
+
604
+ class MaterialConsistencyCheckSchema(BaseModel):
605
+ name: Name527
606
+ """
607
+ Name of the consistency check that is performed, which is listed in an enum.
608
+ """
609
+ key: str
610
+ """
611
+ Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
612
+ """
613
+ severity: Severity
614
+ """
615
+ Severity level of the problem, which is used in UI to differentiate.
616
+ """
617
+ message: str
618
+ """
619
+ Message generated by the consistency check describing the problem.
620
+ """
621
+
622
+
623
+ class CrystalSchema(BaseModel):
624
+ formula: Optional[str] = None
625
+ """
626
+ reduced chemical formula
627
+ """
628
+ unitCellFormula: Optional[str] = None
629
+ """
630
+ chemical formula based on the number of atoms of each element in the supercell
631
+ """
632
+ basis: BasisSchema = Field(..., title="basis schema")
633
+ lattice: LatticeSchema = Field(..., title="lattice schema")
634
+ derivedProperties: Optional[List[DerivedPropertiesSchema]] = Field(None, title="derived properties schema")
635
+ external: Optional[DatabaseSourceSchema] = Field(None, title="database source schema")
636
+ """
637
+ information about a database source
638
+ """
639
+ src: Optional[FileSourceSchema] = Field(None, title="file source schema")
640
+ """
641
+ file source with the information inside
642
+ """
643
+ scaledHash: Optional[str] = None
644
+ """
645
+ Hash string for a scaled structure with lattice vector a set to 1 (eg. for materials under pressure).
646
+ """
647
+ icsdId: Optional[int] = None
648
+ """
649
+ Corresponding ICSD id of the material
650
+ """
651
+ isNonPeriodic: Optional[bool] = None
652
+ """
653
+ Whether to work in the finite molecular picture (usually with atomic orbital basis)
654
+ """
655
+ consistencyChecks: Optional[List[MaterialConsistencyCheckSchema]] = None
656
+ field_id: Optional[str] = Field(None, alias="_id")
657
+ """
658
+ entity identity
659
+ """
660
+ slug: Optional[str] = None
661
+ """
662
+ entity slug
663
+ """
664
+ systemName: Optional[str] = None
665
+ schemaVersion: Optional[str] = "2022.8.16"
666
+ """
667
+ entity's schema version. Used to distinct between different schemas.
668
+ """
669
+ name: Optional[str] = None
670
+ """
671
+ entity name
672
+ """
673
+ isDefault: Optional[bool] = False
674
+ """
675
+ Identifies that entity is defaultable
676
+ """
677
+ metadata: Optional[Dict[str, Any]] = None
678
+
679
+
680
+ class CrystalLatticeLinesUniqueRepeatedSchema(BaseModel):
681
+ termination_top: TerminationSchema = Field(..., title="Termination Schema")
682
+ """
683
+ Defines a specific termination of a slab
684
+ """
685
+ termination_bottom: Optional[TerminationSchema27] = Field(None, title="Termination Schema")
686
+ """
687
+ Defines a specific termination of a slab
688
+ """
689
+ number_of_repetitions_width: Optional[conint(ge=1)] = 1
690
+ """
691
+ Number of repetitions in width direction
692
+ """
693
+ number_of_repetitions_length: Optional[conint(ge=1)] = 1
694
+ """
695
+ Number of repetitions in length direction
696
+ """
697
+ miller_indices_2d: List[int] = Field(..., max_length=2, min_length=2, title="2D Miller Indices Schema")
698
+ """
699
+ The (u,v) Miller indices for the line direction
700
+ """
701
+ crystal: CrystalSchema = Field(..., title="Crystal Schema")
702
+ """
703
+ A crystal structure, referencing the base material schema
704
+ """
705
+ use_conventional_cell: Optional[bool] = True
706
+ """
707
+ Use the conventional cell for the crystal structure
708
+ """