genome-spy-python 0.1.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (64) hide show
  1. genome_spy/__init__.py +199 -0
  2. genome_spy/_chart_authoring.py +231 -0
  3. genome_spy/_conditions.py +72 -0
  4. genome_spy/_embed.py +87 -0
  5. genome_spy/_expressions.py +271 -0
  6. genome_spy/_parameters.py +267 -0
  7. genome_spy/_render.py +207 -0
  8. genome_spy/_utils.py +75 -0
  9. genome_spy/_widget.py +262 -0
  10. genome_spy/api.py +198 -0
  11. genome_spy/arrow.py +155 -0
  12. genome_spy/channels.py +193 -0
  13. genome_spy/chart.py +1240 -0
  14. genome_spy/data.py +56 -0
  15. genome_spy/data_transformers.py +267 -0
  16. genome_spy/datasets/__init__.py +189 -0
  17. genome_spy/datasets/_airway.py +219 -0
  18. genome_spy/datasets/_annotations.py +37 -0
  19. genome_spy/datasets/_gistic.py +43 -0
  20. genome_spy/datasets/_grammar.py +66 -0
  21. genome_spy/datasets/_hapmap.py +180 -0
  22. genome_spy/datasets/_mutation.py +289 -0
  23. genome_spy/datasets/_oncoprint.py +523 -0
  24. genome_spy/datasets/data/airway_metadata.csv +9 -0
  25. genome_spy/datasets/data/airway_scaledcounts.csv +38695 -0
  26. genome_spy/datasets/data/brca.maf.gz +0 -0
  27. genome_spy/datasets/data/hapmap_gwas.csv +14413 -0
  28. genome_spy/datasets/data/mutation_impact_reference.json +27 -0
  29. genome_spy/datasets/data/oncoprint_dataset3.json +266 -0
  30. genome_spy/datasets/data/p53_sequence_comparison.json.gz +0 -0
  31. genome_spy/datasets/data/pik3ca_mutations.json +1 -0
  32. genome_spy/datasets/data/pik3ca_tcga_brca_lollipop.json +38 -0
  33. genome_spy/datasets/data/refseq_gene_bodies.csv.gz +0 -0
  34. genome_spy/datasets/data/tal1_alphagenome_reference.json.gz +0 -0
  35. genome_spy/datasets/data/tcga.tsv +146 -0
  36. genome_spy/datasets/data/tcga_laml.maf.gz +0 -0
  37. genome_spy/datasets/data/tcga_laml_annot.tsv +201 -0
  38. genome_spy/datasets/data/tcga_laml_combined_oncoplot.json.gz +0 -0
  39. genome_spy/datasets/data/tcga_ov_gistic_lesions.tsv.gz +0 -0
  40. genome_spy/datasets/data/tcga_ov_gistic_scores.tsv.gz +0 -0
  41. genome_spy/helpers.py +185 -0
  42. genome_spy/jupyter.py +5 -0
  43. genome_spy/py.typed +0 -0
  44. genome_spy/schema/__init__.py +784 -0
  45. genome_spy/schema/_kwds.py +1394 -0
  46. genome_spy/schema/_typing.py +186 -0
  47. genome_spy/schema/capabilities.json +593 -0
  48. genome_spy/schema/channels.py +8943 -0
  49. genome_spy/schema/composition.py +1064 -0
  50. genome_spy/schema/core.py +51821 -0
  51. genome_spy/schema/ergonomics.py +2056 -0
  52. genome_spy/schema/expressions.py +476 -0
  53. genome_spy/schema/genome-spy-schema.json +33657 -0
  54. genome_spy/schema/lazy.py +326 -0
  55. genome_spy/schema/mixins.py +11684 -0
  56. genome_spy/schemapi.py +264 -0
  57. genome_spy/static/widget.js +345 -0
  58. genome_spy_python-0.1.0.dist-info/METADATA +185 -0
  59. genome_spy_python-0.1.0.dist-info/RECORD +64 -0
  60. genome_spy_python-0.1.0.dist-info/WHEEL +4 -0
  61. genome_spy_python-0.1.0.dist-info/licenses/LICENSE +21 -0
  62. genome_spy_python-0.1.0.dist-info/licenses/LICENSES/ALTAIR-BSD-3-Clause.txt +27 -0
  63. genome_spy_python-0.1.0.dist-info/licenses/LICENSES/GALLERY-DATA-MIT.txt +22 -0
  64. genome_spy_python-0.1.0.dist-info/licenses/THIRD_PARTY_NOTICES.md +42 -0
genome_spy/schema/__init__.py ADDED
@@ -0,0 +1,784 @@
1
+ """Generated from the GenomeSpy JSON Schema. Do not edit by hand."""
2
+
3
+ from genome_spy.schema.core import (
4
+ GenomeSpySchema,
5
+ MARK_TYPES,
6
+ Root,
7
+ load_schema,
8
+ AggregateOp,
9
+ AggregateParams,
10
+ Align,
11
+ AlignmentMismatchesParams,
12
+ ArrowConfig,
13
+ ArrowDirection,
14
+ ArrowProps,
15
+ ArrowRelativeSize,
16
+ ArrowSize,
17
+ Axis,
18
+ AxisConfig,
19
+ AxisGenomeData,
20
+ AxisLabelLayoutParams,
21
+ AxisOrient,
22
+ AxisPlacement,
23
+ AxisTicksData,
24
+ BamData,
25
+ Baseline,
26
+ BedDataFormat,
27
+ BedpeDataFormat,
28
+ BigBedData,
29
+ BigWigData,
30
+ BindCheckbox,
31
+ BindInput,
32
+ BindRadioSelect,
33
+ BindRange,
34
+ Binding,
35
+ BrushConfig,
36
+ BuiltInThemeName,
37
+ ChannelWithScale,
38
+ ChromPosDef,
39
+ ChromosomalLocus,
40
+ CollectParams,
41
+ ColorDef,
42
+ ColorSchemeConfig,
43
+ CompareParams,
44
+ ComplexDomain,
45
+ ConcatSpec,
46
+ ConditionalMarkPropExprDefType,
47
+ ConditionalMarkPropExprDefTypeForShape,
48
+ ConditionalMarkPropFieldDefType,
49
+ ConditionalMarkPropFieldDefTypeForShape,
50
+ ConditionalScaleDatumDef,
51
+ ConditionalValueDefNumberExprRef,
52
+ ConditionalValueDefStringNullExprRef,
53
+ ConditionalParameterMarkPropExprDefType,
54
+ ConditionalParameterMarkPropExprDefTypeForShape,
55
+ ConditionalParameterMarkPropFieldDefType,
56
+ ConditionalParameterMarkPropFieldDefTypeForShape,
57
+ ConditionalParameterScaleDatumDef,
58
+ ConditionalParameterValueDefNumberExprRef,
59
+ ConditionalParameterValueDefStringNullExprRef,
60
+ Contig,
61
+ CoordinateLookupInput,
62
+ CoordinateLookupParams,
63
+ CoreRootSpec,
64
+ CoverageParams,
65
+ CrossData,
66
+ CrossInput,
67
+ CrossParams,
68
+ CsvDataFormat,
69
+ Data,
70
+ DataFormat,
71
+ DataSource,
72
+ DirectionDef,
73
+ Displace1DParams,
74
+ DomEventType,
75
+ DomainValue,
76
+ DomainValueArray,
77
+ DsvDataFormat,
78
+ DynamicCallbackData,
79
+ DynamicOpacity,
80
+ Encoding,
81
+ EventConfig,
82
+ ExprDef,
83
+ ExprFilterParams,
84
+ ExprParameter,
85
+ ExprRef,
86
+ FadedMultiscaleStops,
87
+ Field,
88
+ FieldDefWithoutScale,
89
+ FieldName,
90
+ FieldOrDatumDefWithConditionMarkPropFieldDefTypeStringNull,
91
+ FieldOrDatumDefWithConditionMarkPropFieldDefTypeNumber,
92
+ FieldOrDatumDefWithConditionMarkPropFieldDefTypeForShapeStringNull,
93
+ FieldOrDatumDefWithConditionScaleDatumDefStringNull,
94
+ FieldOrDatumDefWithConditionScaleDatumDefNumber,
95
+ FilterParams,
96
+ FilterScoredLabelsParams,
97
+ FlattenCigarParams,
98
+ FlattenCompressedExonsParams,
99
+ FlattenDelimitedParams,
100
+ FlattenParams,
101
+ FlattenSequenceParams,
102
+ FontStyle,
103
+ FontWeight,
104
+ FormulaParams,
105
+ Generator,
106
+ GenomeAxis,
107
+ GenomeConfig,
108
+ GenomeConfigBase,
109
+ GenomeDefinition,
110
+ GenomeSpyConfig,
111
+ Gff3Data,
112
+ HConcatSpec,
113
+ HandledTooltip,
114
+ IdentifierParams,
115
+ ImportSpec,
116
+ IndexUrlSourceRef,
117
+ IndexUrlTemplate,
118
+ IndexedFastaData,
119
+ InlineData,
120
+ InlineDataset,
121
+ InlineGenomeConfig,
122
+ InlineGenomeDefinition,
123
+ InlineLocusAssembly,
124
+ InteractionEventType,
125
+ IntervalSelectionConfig,
126
+ JsonDataFormat,
127
+ KeyDef,
128
+ LayerSpec,
129
+ LazyData,
130
+ LazyDataParams,
131
+ Legend,
132
+ LegendConfig,
133
+ LegendDirection,
134
+ LegendLayout,
135
+ LegendOrient,
136
+ LegendRegionAnchor,
137
+ LegendRegionLayout,
138
+ LegendResolutionBehavior,
139
+ LegendTitleOrient,
140
+ LerpTransition,
141
+ LinearizeGenomicCoordinateParams,
142
+ LinkConfig,
143
+ LinkProps,
144
+ LookupParams,
145
+ LookupSelfInput,
146
+ MarkConfig,
147
+ MarkPropDefStringNullTypeForShape,
148
+ MarkPropDefStringNull,
149
+ MarkPropDefNumber,
150
+ MarkPropExprDef,
151
+ MarkPropExprDefType,
152
+ MarkPropExprDefTypeForShape,
153
+ MarkProps,
154
+ MarkType,
155
+ MeasureTextParams,
156
+ MergeFacetsParams,
157
+ MultiUrlSourceRef,
158
+ MultiscaleSpec,
159
+ MultiscaleStops,
160
+ MultiscaleStopsDef,
161
+ NamedData,
162
+ NamedGenomeConfig,
163
+ NumericDomain,
164
+ NumericMarkPropDef,
165
+ NumericStopDef,
166
+ NumericValueDef,
167
+ OffsetChannel,
168
+ OffsetDef,
169
+ OtherDataFormat,
170
+ OverhangConfig,
171
+ PackLegendLabelsParams,
172
+ PaddingConfig,
173
+ Paddings,
174
+ ParamTransition,
175
+ Parameter,
176
+ Parse,
177
+ ParseValue,
178
+ PileupParams,
179
+ PlainValueParameter,
180
+ PointConfig,
181
+ PointProps,
182
+ PointSelectionConfig,
183
+ Position2Def,
184
+ PositionDatumDef,
185
+ PositionDef,
186
+ PositionExprDef,
187
+ PositionFieldDef,
188
+ PositionValueDef,
189
+ PositionalChannel,
190
+ PrimaryPositionalChannel,
191
+ ProjectParams,
192
+ RangeConfig,
193
+ RectConfig,
194
+ RectProps,
195
+ RegexExtractParams,
196
+ RegexFoldParams,
197
+ ResolutionBehavior,
198
+ ResolutionMapLegendResolutionBehavior,
199
+ ResolutionMapResolutionBehavior,
200
+ RuleConfig,
201
+ RuleProps,
202
+ RulerChannelValue,
203
+ RulerClear,
204
+ RulerConfig,
205
+ RulerDisplay,
206
+ RulerEventConfig,
207
+ RulerEventType,
208
+ RulerExtent,
209
+ RulerInitMapping,
210
+ RulerMarkConfig,
211
+ RulerParameter,
212
+ RulerSnap,
213
+ RulerSource,
214
+ SampleParams,
215
+ Scalar,
216
+ ScalarDomain,
217
+ Scale,
218
+ ScaleConfig,
219
+ ScaleInterpolate,
220
+ ScaleInterpolateParams,
221
+ ScaleType,
222
+ SchemeParams,
223
+ SearchDef,
224
+ SecondaryChromPosDef,
225
+ SecondaryPositionalChannel,
226
+ SelectionDomainRef,
227
+ SelectionExtent,
228
+ SelectionFilterParams,
229
+ SelectionInitIntervalMapping,
230
+ SelectionParameter,
231
+ SelectionType,
232
+ SeparatorProps,
233
+ SequenceGenerator,
234
+ SequenceParams,
235
+ SetIntersectionParams,
236
+ ShapeDef,
237
+ SingleUrlSourceRef,
238
+ SizeDef,
239
+ SortOrder,
240
+ StackParams,
241
+ Step,
242
+ StringDatumDef,
243
+ StringFieldDef,
244
+ StyleConfig,
245
+ TabixTsvData,
246
+ TemplateImport,
247
+ TextConfig,
248
+ TextDef,
249
+ TextProps,
250
+ TickConfig,
251
+ TickProps,
252
+ Title,
253
+ TitleAnchor,
254
+ TitleConfig,
255
+ TitleFrame,
256
+ TitleOrient,
257
+ Tooltip,
258
+ TooltipDef,
259
+ TransformParams,
260
+ TransitionedMultiscaleStops,
261
+ TransitionedValueParameter,
262
+ TruncateTextParams,
263
+ Type,
264
+ TypeForShape,
265
+ UnitSpec,
266
+ UrlData,
267
+ UrlGenomeConfig,
268
+ UrlGenomeDefinition,
269
+ UrlImport,
270
+ UrlList,
271
+ UrlSourceRef,
272
+ UrlTemplate,
273
+ VConcatSpec,
274
+ ValueDefArrowDirection,
275
+ ValueDefNumber,
276
+ ValueDefString,
277
+ ValueDefWithConditionStringNullType,
278
+ ValueDefWithConditionStringNullTypeForShape,
279
+ ValueDefWithConditionNumberType,
280
+ ValueParameter,
281
+ VariableParameter,
282
+ VcfData,
283
+ VcfDataFormat,
284
+ ViewBackground,
285
+ ViewConfig,
286
+ ViewOpacityDef,
287
+ ViewSpec,
288
+ ViewportDomainRef,
289
+ WigDataFormat,
290
+ WindowOnlyOp,
291
+ WindowOp,
292
+ WindowParams,
293
+ ZoomParams,
294
+ )
295
+ from genome_spy.schema._typing import (
296
+ AggregateOp_T,
297
+ Align_T,
298
+ ArrowDirection_T,
299
+ AxisOrient_T,
300
+ AxisPlacement_T,
301
+ Baseline_T,
302
+ BuiltInThemeName_T,
303
+ FieldName_T,
304
+ Field_T,
305
+ FontStyle_T,
306
+ FontWeight_T,
307
+ InteractionEventType_T,
308
+ DomEventType_T,
309
+ LegendDirection_T,
310
+ LegendOrient_T,
311
+ LegendRegionAnchor_T,
312
+ LegendTitleOrient_T,
313
+ MarkType_T,
314
+ NumericDomain_T,
315
+ OffsetChannel_T,
316
+ ParseValue_T,
317
+ PrimaryPositionalChannel_T,
318
+ ResolutionBehavior_T,
319
+ LegendResolutionBehavior_T,
320
+ RulerClear_T,
321
+ RulerDisplay_T,
322
+ RulerEventType_T,
323
+ RulerExtent_T,
324
+ RulerSnap_T,
325
+ RulerSource_T,
326
+ ScalarDomain_T,
327
+ Scalar_T,
328
+ ScaleInterpolate_T,
329
+ ScaleType_T,
330
+ SecondaryPositionalChannel_T,
331
+ PositionalChannel_T,
332
+ ChannelWithScale_T,
333
+ SelectionExtent_T,
334
+ SelectionType_T,
335
+ SortOrder_T,
336
+ TitleAnchor_T,
337
+ TitleFrame_T,
338
+ TitleOrient_T,
339
+ TypeForShape_T,
340
+ Type_T,
341
+ WindowOnlyOp_T,
342
+ WindowOp_T,
343
+ )
344
+ from genome_spy.schema._kwds import (
345
+ AxisKwds,
346
+ AxisConfigKwds,
347
+ BindCheckboxKwds,
348
+ BindInputKwds,
349
+ BindRadioSelectKwds,
350
+ BindRangeKwds,
351
+ CompareParamsKwds,
352
+ DataFormatKwds,
353
+ DynamicOpacityKwds,
354
+ EncodingKwds,
355
+ EventConfigKwds,
356
+ GenomeAxisKwds,
357
+ GenomeSpyConfigKwds,
358
+ HandledTooltipKwds,
359
+ LegendKwds,
360
+ LegendConfigKwds,
361
+ LinkConfigKwds,
362
+ MarkConfigKwds,
363
+ PaddingsKwds,
364
+ ParameterKwds,
365
+ ParseKwds,
366
+ PointConfigKwds,
367
+ RangeConfigKwds,
368
+ RectConfigKwds,
369
+ RuleConfigKwds,
370
+ RulerConfigKwds,
371
+ RulerEventConfigKwds,
372
+ RulerMarkConfigKwds,
373
+ ScaleKwds,
374
+ ScaleConfigKwds,
375
+ ScaleInterpolateParamsKwds,
376
+ SchemeParamsKwds,
377
+ SeparatorPropsKwds,
378
+ SizeDefKwds,
379
+ StepKwds,
380
+ TextConfigKwds,
381
+ TitleKwds,
382
+ TitleConfigKwds,
383
+ ViewBackgroundKwds,
384
+ ViewConfigKwds,
385
+ ZoomParamsKwds,
386
+ AxesKwds,
387
+ LegendsKwds,
388
+ AxisResolveKwds,
389
+ LegendResolveKwds,
390
+ ScaleResolveKwds,
391
+ ResolveKwds,
392
+ ScalesKwds,
393
+ )
394
+
395
+ SCHEMA_VERSION = "0.87.0"
396
+
397
+ __all__ = [
398
+ "GenomeSpySchema",
399
+ "MARK_TYPES",
400
+ "Root",
401
+ "load_schema",
402
+ "AggregateOp",
403
+ "AggregateParams",
404
+ "Align",
405
+ "AlignmentMismatchesParams",
406
+ "ArrowConfig",
407
+ "ArrowDirection",
408
+ "ArrowProps",
409
+ "ArrowRelativeSize",
410
+ "ArrowSize",
411
+ "Axis",
412
+ "AxisConfig",
413
+ "AxisGenomeData",
414
+ "AxisLabelLayoutParams",
415
+ "AxisOrient",
416
+ "AxisPlacement",
417
+ "AxisTicksData",
418
+ "BamData",
419
+ "Baseline",
420
+ "BedDataFormat",
421
+ "BedpeDataFormat",
422
+ "BigBedData",
423
+ "BigWigData",
424
+ "BindCheckbox",
425
+ "BindInput",
426
+ "BindRadioSelect",
427
+ "BindRange",
428
+ "Binding",
429
+ "BrushConfig",
430
+ "BuiltInThemeName",
431
+ "ChannelWithScale",
432
+ "ChromPosDef",
433
+ "ChromosomalLocus",
434
+ "CollectParams",
435
+ "ColorDef",
436
+ "ColorSchemeConfig",
437
+ "CompareParams",
438
+ "ComplexDomain",
439
+ "ConcatSpec",
440
+ "ConditionalMarkPropExprDefType",
441
+ "ConditionalMarkPropExprDefTypeForShape",
442
+ "ConditionalMarkPropFieldDefType",
443
+ "ConditionalMarkPropFieldDefTypeForShape",
444
+ "ConditionalScaleDatumDef",
445
+ "ConditionalValueDefNumberExprRef",
446
+ "ConditionalValueDefStringNullExprRef",
447
+ "ConditionalParameterMarkPropExprDefType",
448
+ "ConditionalParameterMarkPropExprDefTypeForShape",
449
+ "ConditionalParameterMarkPropFieldDefType",
450
+ "ConditionalParameterMarkPropFieldDefTypeForShape",
451
+ "ConditionalParameterScaleDatumDef",
452
+ "ConditionalParameterValueDefNumberExprRef",
453
+ "ConditionalParameterValueDefStringNullExprRef",
454
+ "Contig",
455
+ "CoordinateLookupInput",
456
+ "CoordinateLookupParams",
457
+ "CoreRootSpec",
458
+ "CoverageParams",
459
+ "CrossData",
460
+ "CrossInput",
461
+ "CrossParams",
462
+ "CsvDataFormat",
463
+ "Data",
464
+ "DataFormat",
465
+ "DataSource",
466
+ "DirectionDef",
467
+ "Displace1DParams",
468
+ "DomEventType",
469
+ "DomainValue",
470
+ "DomainValueArray",
471
+ "DsvDataFormat",
472
+ "DynamicCallbackData",
473
+ "DynamicOpacity",
474
+ "Encoding",
475
+ "EventConfig",
476
+ "ExprDef",
477
+ "ExprFilterParams",
478
+ "ExprParameter",
479
+ "ExprRef",
480
+ "FadedMultiscaleStops",
481
+ "Field",
482
+ "FieldDefWithoutScale",
483
+ "FieldName",
484
+ "FieldOrDatumDefWithConditionMarkPropFieldDefTypeStringNull",
485
+ "FieldOrDatumDefWithConditionMarkPropFieldDefTypeNumber",
486
+ "FieldOrDatumDefWithConditionMarkPropFieldDefTypeForShapeStringNull",
487
+ "FieldOrDatumDefWithConditionScaleDatumDefStringNull",
488
+ "FieldOrDatumDefWithConditionScaleDatumDefNumber",
489
+ "FilterParams",
490
+ "FilterScoredLabelsParams",
491
+ "FlattenCigarParams",
492
+ "FlattenCompressedExonsParams",
493
+ "FlattenDelimitedParams",
494
+ "FlattenParams",
495
+ "FlattenSequenceParams",
496
+ "FontStyle",
497
+ "FontWeight",
498
+ "FormulaParams",
499
+ "Generator",
500
+ "GenomeAxis",
501
+ "GenomeConfig",
502
+ "GenomeConfigBase",
503
+ "GenomeDefinition",
504
+ "GenomeSpyConfig",
505
+ "Gff3Data",
506
+ "HConcatSpec",
507
+ "HandledTooltip",
508
+ "IdentifierParams",
509
+ "ImportSpec",
510
+ "IndexUrlSourceRef",
511
+ "IndexUrlTemplate",
512
+ "IndexedFastaData",
513
+ "InlineData",
514
+ "InlineDataset",
515
+ "InlineGenomeConfig",
516
+ "InlineGenomeDefinition",
517
+ "InlineLocusAssembly",
518
+ "InteractionEventType",
519
+ "IntervalSelectionConfig",
520
+ "JsonDataFormat",
521
+ "KeyDef",
522
+ "LayerSpec",
523
+ "LazyData",
524
+ "LazyDataParams",
525
+ "Legend",
526
+ "LegendConfig",
527
+ "LegendDirection",
528
+ "LegendLayout",
529
+ "LegendOrient",
530
+ "LegendRegionAnchor",
531
+ "LegendRegionLayout",
532
+ "LegendResolutionBehavior",
533
+ "LegendTitleOrient",
534
+ "LerpTransition",
535
+ "LinearizeGenomicCoordinateParams",
536
+ "LinkConfig",
537
+ "LinkProps",
538
+ "LookupParams",
539
+ "LookupSelfInput",
540
+ "MarkConfig",
541
+ "MarkPropDefStringNullTypeForShape",
542
+ "MarkPropDefStringNull",
543
+ "MarkPropDefNumber",
544
+ "MarkPropExprDef",
545
+ "MarkPropExprDefType",
546
+ "MarkPropExprDefTypeForShape",
547
+ "MarkProps",
548
+ "MarkType",
549
+ "MeasureTextParams",
550
+ "MergeFacetsParams",
551
+ "MultiUrlSourceRef",
552
+ "MultiscaleSpec",
553
+ "MultiscaleStops",
554
+ "MultiscaleStopsDef",
555
+ "NamedData",
556
+ "NamedGenomeConfig",
557
+ "NumericDomain",
558
+ "NumericMarkPropDef",
559
+ "NumericStopDef",
560
+ "NumericValueDef",
561
+ "OffsetChannel",
562
+ "OffsetDef",
563
+ "OtherDataFormat",
564
+ "OverhangConfig",
565
+ "PackLegendLabelsParams",
566
+ "PaddingConfig",
567
+ "Paddings",
568
+ "ParamTransition",
569
+ "Parameter",
570
+ "Parse",
571
+ "ParseValue",
572
+ "PileupParams",
573
+ "PlainValueParameter",
574
+ "PointConfig",
575
+ "PointProps",
576
+ "PointSelectionConfig",
577
+ "Position2Def",
578
+ "PositionDatumDef",
579
+ "PositionDef",
580
+ "PositionExprDef",
581
+ "PositionFieldDef",
582
+ "PositionValueDef",
583
+ "PositionalChannel",
584
+ "PrimaryPositionalChannel",
585
+ "ProjectParams",
586
+ "RangeConfig",
587
+ "RectConfig",
588
+ "RectProps",
589
+ "RegexExtractParams",
590
+ "RegexFoldParams",
591
+ "ResolutionBehavior",
592
+ "ResolutionMapLegendResolutionBehavior",
593
+ "ResolutionMapResolutionBehavior",
594
+ "RuleConfig",
595
+ "RuleProps",
596
+ "RulerChannelValue",
597
+ "RulerClear",
598
+ "RulerConfig",
599
+ "RulerDisplay",
600
+ "RulerEventConfig",
601
+ "RulerEventType",
602
+ "RulerExtent",
603
+ "RulerInitMapping",
604
+ "RulerMarkConfig",
605
+ "RulerParameter",
606
+ "RulerSnap",
607
+ "RulerSource",
608
+ "SampleParams",
609
+ "Scalar",
610
+ "ScalarDomain",
611
+ "Scale",
612
+ "ScaleConfig",
613
+ "ScaleInterpolate",
614
+ "ScaleInterpolateParams",
615
+ "ScaleType",
616
+ "SchemeParams",
617
+ "SearchDef",
618
+ "SecondaryChromPosDef",
619
+ "SecondaryPositionalChannel",
620
+ "SelectionDomainRef",
621
+ "SelectionExtent",
622
+ "SelectionFilterParams",
623
+ "SelectionInitIntervalMapping",
624
+ "SelectionParameter",
625
+ "SelectionType",
626
+ "SeparatorProps",
627
+ "SequenceGenerator",
628
+ "SequenceParams",
629
+ "SetIntersectionParams",
630
+ "ShapeDef",
631
+ "SingleUrlSourceRef",
632
+ "SizeDef",
633
+ "SortOrder",
634
+ "StackParams",
635
+ "Step",
636
+ "StringDatumDef",
637
+ "StringFieldDef",
638
+ "StyleConfig",
639
+ "TabixTsvData",
640
+ "TemplateImport",
641
+ "TextConfig",
642
+ "TextDef",
643
+ "TextProps",
644
+ "TickConfig",
645
+ "TickProps",
646
+ "Title",
647
+ "TitleAnchor",
648
+ "TitleConfig",
649
+ "TitleFrame",
650
+ "TitleOrient",
651
+ "Tooltip",
652
+ "TooltipDef",
653
+ "TransformParams",
654
+ "TransitionedMultiscaleStops",
655
+ "TransitionedValueParameter",
656
+ "TruncateTextParams",
657
+ "Type",
658
+ "TypeForShape",
659
+ "UnitSpec",
660
+ "UrlData",
661
+ "UrlGenomeConfig",
662
+ "UrlGenomeDefinition",
663
+ "UrlImport",
664
+ "UrlList",
665
+ "UrlSourceRef",
666
+ "UrlTemplate",
667
+ "VConcatSpec",
668
+ "ValueDefArrowDirection",
669
+ "ValueDefNumber",
670
+ "ValueDefString",
671
+ "ValueDefWithConditionStringNullType",
672
+ "ValueDefWithConditionStringNullTypeForShape",
673
+ "ValueDefWithConditionNumberType",
674
+ "ValueParameter",
675
+ "VariableParameter",
676
+ "VcfData",
677
+ "VcfDataFormat",
678
+ "ViewBackground",
679
+ "ViewConfig",
680
+ "ViewOpacityDef",
681
+ "ViewSpec",
682
+ "ViewportDomainRef",
683
+ "WigDataFormat",
684
+ "WindowOnlyOp",
685
+ "WindowOp",
686
+ "WindowParams",
687
+ "ZoomParams",
688
+ "AggregateOp_T",
689
+ "Align_T",
690
+ "ArrowDirection_T",
691
+ "AxisOrient_T",
692
+ "AxisPlacement_T",
693
+ "Baseline_T",
694
+ "BuiltInThemeName_T",
695
+ "FieldName_T",
696
+ "Field_T",
697
+ "FontStyle_T",
698
+ "FontWeight_T",
699
+ "InteractionEventType_T",
700
+ "DomEventType_T",
701
+ "LegendDirection_T",
702
+ "LegendOrient_T",
703
+ "LegendRegionAnchor_T",
704
+ "LegendTitleOrient_T",
705
+ "MarkType_T",
706
+ "NumericDomain_T",
707
+ "OffsetChannel_T",
708
+ "ParseValue_T",
709
+ "PrimaryPositionalChannel_T",
710
+ "ResolutionBehavior_T",
711
+ "LegendResolutionBehavior_T",
712
+ "RulerClear_T",
713
+ "RulerDisplay_T",
714
+ "RulerEventType_T",
715
+ "RulerExtent_T",
716
+ "RulerSnap_T",
717
+ "RulerSource_T",
718
+ "ScalarDomain_T",
719
+ "Scalar_T",
720
+ "ScaleInterpolate_T",
721
+ "ScaleType_T",
722
+ "SecondaryPositionalChannel_T",
723
+ "PositionalChannel_T",
724
+ "ChannelWithScale_T",
725
+ "SelectionExtent_T",
726
+ "SelectionType_T",
727
+ "SortOrder_T",
728
+ "TitleAnchor_T",
729
+ "TitleFrame_T",
730
+ "TitleOrient_T",
731
+ "TypeForShape_T",
732
+ "Type_T",
733
+ "WindowOnlyOp_T",
734
+ "WindowOp_T",
735
+ "AxisKwds",
736
+ "AxisConfigKwds",
737
+ "BindCheckboxKwds",
738
+ "BindInputKwds",
739
+ "BindRadioSelectKwds",
740
+ "BindRangeKwds",
741
+ "CompareParamsKwds",
742
+ "DataFormatKwds",
743
+ "DynamicOpacityKwds",
744
+ "EncodingKwds",
745
+ "EventConfigKwds",
746
+ "GenomeAxisKwds",
747
+ "GenomeSpyConfigKwds",
748
+ "HandledTooltipKwds",
749
+ "LegendKwds",
750
+ "LegendConfigKwds",
751
+ "LinkConfigKwds",
752
+ "MarkConfigKwds",
753
+ "PaddingsKwds",
754
+ "ParameterKwds",
755
+ "ParseKwds",
756
+ "PointConfigKwds",
757
+ "RangeConfigKwds",
758
+ "RectConfigKwds",
759
+ "RuleConfigKwds",
760
+ "RulerConfigKwds",
761
+ "RulerEventConfigKwds",
762
+ "RulerMarkConfigKwds",
763
+ "ScaleKwds",
764
+ "ScaleConfigKwds",
765
+ "ScaleInterpolateParamsKwds",
766
+ "SchemeParamsKwds",
767
+ "SeparatorPropsKwds",
768
+ "SizeDefKwds",
769
+ "StepKwds",
770
+ "TextConfigKwds",
771
+ "TitleKwds",
772
+ "TitleConfigKwds",
773
+ "ViewBackgroundKwds",
774
+ "ViewConfigKwds",
775
+ "ZoomParamsKwds",
776
+ "AxesKwds",
777
+ "LegendsKwds",
778
+ "AxisResolveKwds",
779
+ "LegendResolveKwds",
780
+ "ScaleResolveKwds",
781
+ "ResolveKwds",
782
+ "ScalesKwds",
783
+ "SCHEMA_VERSION",
784
+ ]