gebpy 1.1.3__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- gebpy/__init__.py +55 -0
- gebpy/__pycache__/__init__.cpython-310.pyc +0 -0
- gebpy/adapters/__init__.py +0 -0
- gebpy/cli/__init__.py +0 -0
- gebpy/core/__init__.py +0 -0
- gebpy/core/chemistry/__init__.py +0 -0
- gebpy/core/chemistry/common.py +1369 -0
- gebpy/core/chemistry/elements.py +317 -0
- gebpy/core/chemistry/geochemistry.py +1728 -0
- gebpy/core/fluids/__init__.py +0 -0
- gebpy/core/io/__init__.py +0 -0
- gebpy/core/mathematics/__init__.py +0 -0
- gebpy/core/minerals/__init__.py +0 -0
- gebpy/core/minerals/carbonates.py +412 -0
- gebpy/core/minerals/common.py +555 -0
- gebpy/core/minerals/config.py +77 -0
- gebpy/core/minerals/cyclosilicates.py +0 -0
- gebpy/core/minerals/halides.py +0 -0
- gebpy/core/minerals/inosilicates.py +0 -0
- gebpy/core/minerals/nesosilicates.py +0 -0
- gebpy/core/minerals/organics.py +0 -0
- gebpy/core/minerals/oxides.py +589 -0
- gebpy/core/minerals/phosphates.py +0 -0
- gebpy/core/minerals/phospides.py +0 -0
- gebpy/core/minerals/phyllosilicates.py +436 -0
- gebpy/core/minerals/sorosilicates.py +0 -0
- gebpy/core/minerals/sulfates.py +0 -0
- gebpy/core/minerals/sulfides.py +459 -0
- gebpy/core/minerals/synthesis.py +201 -0
- gebpy/core/minerals/tectosilicates.py +433 -0
- gebpy/core/physics/__init__.py +0 -0
- gebpy/core/physics/common.py +53 -0
- gebpy/core/physics/geophysics.py +351 -0
- gebpy/core/rocks/__init__.py +0 -0
- gebpy/core/rocks/anisotropic_rocks.py +395 -0
- gebpy/core/rocks/common.py +95 -0
- gebpy/core/rocks/config.py +77 -0
- gebpy/core/rocks/isotropic_rocks.py +395 -0
- gebpy/core/rocks/sedimentary.py +385 -0
- gebpy/core/subsurface/__init__.py +0 -0
- gebpy/data_minerals/__init__.py +0 -0
- gebpy/data_minerals/albite.yaml +59 -0
- gebpy/data_minerals/anatase.yaml +43 -0
- gebpy/data_minerals/ankerite.yaml +47 -0
- gebpy/data_minerals/annite.yaml +57 -0
- gebpy/data_minerals/anorthite.yaml +59 -0
- gebpy/data_minerals/antigorite.yaml +53 -0
- gebpy/data_minerals/aragonite.yaml +48 -0
- gebpy/data_minerals/argutite.yaml +43 -0
- gebpy/data_minerals/arsenolite.yaml +40 -0
- gebpy/data_minerals/au3oxide.yaml +46 -0
- gebpy/data_minerals/avicennite.yaml +40 -0
- gebpy/data_minerals/azurite.yaml +53 -0
- gebpy/data_minerals/baddeleyite.yaml +49 -0
- gebpy/data_minerals/bismite.yaml +49 -0
- gebpy/data_minerals/boehmite.yaml +48 -0
- gebpy/data_minerals/brookite.yaml +46 -0
- gebpy/data_minerals/brucite.yaml +45 -0
- gebpy/data_minerals/bunsenite.yaml +40 -0
- gebpy/data_minerals/calcite.yaml +45 -0
- gebpy/data_minerals/cassiterite.yaml +43 -0
- gebpy/data_minerals/cerussite.yaml +48 -0
- gebpy/data_minerals/chamosite.yaml +56 -0
- gebpy/data_minerals/chlorite.yaml +75 -0
- gebpy/data_minerals/chromite.yaml +42 -0
- gebpy/data_minerals/chrysotile.yaml +53 -0
- gebpy/data_minerals/claudetite.yaml +49 -0
- gebpy/data_minerals/clinochlore.yaml +55 -0
- gebpy/data_minerals/cochromite.yaml +42 -0
- gebpy/data_minerals/corundum.yaml +43 -0
- gebpy/data_minerals/crocoite.yaml +51 -0
- gebpy/data_minerals/cuprite.yaml +40 -0
- gebpy/data_minerals/cuprospinel.yaml +42 -0
- gebpy/data_minerals/diaspore.yaml +48 -0
- gebpy/data_minerals/dolomite.yaml +47 -0
- gebpy/data_minerals/eastonite.yaml +57 -0
- gebpy/data_minerals/eskolaite.yaml +43 -0
- gebpy/data_minerals/fechlorite.yaml +61 -0
- gebpy/data_minerals/fecolumbite.yaml +48 -0
- gebpy/data_minerals/ferberite.yaml +51 -0
- gebpy/data_minerals/fetantalite.yaml +48 -0
- gebpy/data_minerals/franklinite.yaml +42 -0
- gebpy/data_minerals/gahnite.yaml +42 -0
- gebpy/data_minerals/galaxite.yaml +42 -0
- gebpy/data_minerals/geikielite.yaml +45 -0
- gebpy/data_minerals/gibbsite.yaml +51 -0
- gebpy/data_minerals/glauconite.yaml +69 -0
- gebpy/data_minerals/goethite.yaml +48 -0
- gebpy/data_minerals/groutite.yaml +48 -0
- gebpy/data_minerals/hematite.yaml +43 -0
- gebpy/data_minerals/hercynite.yaml +42 -0
- gebpy/data_minerals/huebnerite.yaml +51 -0
- gebpy/data_minerals/ikaite.yaml +53 -0
- gebpy/data_minerals/illite.yaml +55 -0
- gebpy/data_minerals/ilmenite.yaml +45 -0
- gebpy/data_minerals/jacobsite.yaml +42 -0
- gebpy/data_minerals/kalsilite.yaml +47 -0
- gebpy/data_minerals/kaolinite.yaml +59 -0
- gebpy/data_minerals/karelianite.yaml +43 -0
- gebpy/data_minerals/lime.yaml +40 -0
- gebpy/data_minerals/litharge.yaml +43 -0
- gebpy/data_minerals/magnesiochromite.yaml +42 -0
- gebpy/data_minerals/magnesioferrite.yaml +42 -0
- gebpy/data_minerals/magnesite.yaml +45 -0
- gebpy/data_minerals/magnetite.yaml +41 -0
- gebpy/data_minerals/malachite.yaml +53 -0
- gebpy/data_minerals/manganite.yaml +51 -0
- gebpy/data_minerals/manganochromite.yaml +42 -0
- gebpy/data_minerals/manganosite.yaml +40 -0
- gebpy/data_minerals/marialite.yaml +49 -0
- gebpy/data_minerals/massicot.yaml +46 -0
- gebpy/data_minerals/meionite.yaml +49 -0
- gebpy/data_minerals/mgchlorite.yaml +61 -0
- gebpy/data_minerals/mgcolumbite.yaml +48 -0
- gebpy/data_minerals/mgtantalite.yaml +48 -0
- gebpy/data_minerals/microcline.yaml +59 -0
- gebpy/data_minerals/minium.yaml +44 -0
- gebpy/data_minerals/mnchlorite.yaml +61 -0
- gebpy/data_minerals/mncolumbite.yaml +48 -0
- gebpy/data_minerals/mntantalite.yaml +48 -0
- gebpy/data_minerals/monteponite.yaml +40 -0
- gebpy/data_minerals/montmorillonite.yaml +77 -0
- gebpy/data_minerals/muscovite.yaml +55 -0
- gebpy/data_minerals/nanepheline.yaml +47 -0
- gebpy/data_minerals/nichlorite.yaml +61 -0
- gebpy/data_minerals/nichromite.yaml +42 -0
- gebpy/data_minerals/nimite.yaml +55 -0
- gebpy/data_minerals/nontronite.yaml +73 -0
- gebpy/data_minerals/orthoclase.yaml +53 -0
- gebpy/data_minerals/paratellurite.yaml +43 -0
- gebpy/data_minerals/pennantite.yaml +61 -0
- gebpy/data_minerals/periclase.yaml +40 -0
- gebpy/data_minerals/phlogopite.yaml +57 -0
- gebpy/data_minerals/plattnerite.yaml +43 -0
- gebpy/data_minerals/powellite.yaml +45 -0
- gebpy/data_minerals/pyrite.yaml +40 -0
- gebpy/data_minerals/pyrolusite.yaml +43 -0
- gebpy/data_minerals/pyrophanite.yaml +45 -0
- gebpy/data_minerals/pyrophyllite.yaml +59 -0
- gebpy/data_minerals/quartz.yaml +43 -0
- gebpy/data_minerals/rhodochrosite.yaml +45 -0
- gebpy/data_minerals/rutile.yaml +43 -0
- gebpy/data_minerals/saponite.yaml +77 -0
- gebpy/data_minerals/scheelite.yaml +45 -0
- gebpy/data_minerals/scrutinyite.yaml +46 -0
- gebpy/data_minerals/senarmontite.yaml +40 -0
- gebpy/data_minerals/siderite.yaml +45 -0
- gebpy/data_minerals/siderophyllite.yaml +57 -0
- gebpy/data_minerals/smithsonite.yaml +45 -0
- gebpy/data_minerals/spinel.yaml +42 -0
- gebpy/data_minerals/stishovite.yaml +43 -0
- gebpy/data_minerals/stolzite.yaml +45 -0
- gebpy/data_minerals/talc.yaml +53 -0
- gebpy/data_minerals/tistarite.yaml +43 -0
- gebpy/data_minerals/trevorite.yaml +42 -0
- gebpy/data_minerals/ulvoespinel.yaml +42 -0
- gebpy/data_minerals/uraninite.yaml +40 -0
- gebpy/data_minerals/valentinite.yaml +46 -0
- gebpy/data_minerals/vermiculite.yaml +69 -0
- gebpy/data_minerals/wulfenite.yaml +45 -0
- gebpy/data_minerals/wustite.yaml +40 -0
- gebpy/data_minerals/zincite.yaml +43 -0
- gebpy/data_minerals/zincochromite.yaml +42 -0
- gebpy/data_rocks/__init__.py +0 -0
- gebpy/data_rocks/dolostone.yaml +40 -0
- gebpy/data_rocks/limestone.yaml +40 -0
- gebpy/data_rocks/marl.yaml +50 -0
- gebpy/data_rocks/sandstone.yaml +39 -0
- gebpy/data_rocks/shale.yaml +50 -0
- gebpy/gebpy_app.py +8732 -0
- gebpy/gui/__init__.py +0 -0
- gebpy/lib/images/GebPy_Header.png +0 -0
- gebpy/lib/images/GebPy_Icon.png +0 -0
- gebpy/lib/images/GebPy_Logo.png +0 -0
- gebpy/main.py +29 -0
- gebpy/modules/__init__.py +0 -0
- gebpy/modules/__pycache__/__init__.cpython-310.pyc +0 -0
- gebpy/modules/__pycache__/metamorphics.cpython-310.pyc +0 -0
- gebpy/modules/__pycache__/silicates.cpython-310.pyc +0 -0
- gebpy/modules/carbonates.py +2658 -0
- gebpy/modules/chemistry.py +1369 -0
- gebpy/modules/core.py +1805 -0
- gebpy/modules/elements.py +317 -0
- gebpy/modules/evaporites.py +1299 -0
- gebpy/modules/exploration.py +1145 -0
- gebpy/modules/fluids.py +339 -0
- gebpy/modules/geochemistry.py +1727 -0
- gebpy/modules/geophysics.py +351 -0
- gebpy/modules/gui.py +9093 -0
- gebpy/modules/gui_elements.py +145 -0
- gebpy/modules/halides.py +485 -0
- gebpy/modules/igneous.py +2241 -0
- gebpy/modules/metamorphics.py +3222 -0
- gebpy/modules/mineralogy.py +442 -0
- gebpy/modules/minerals.py +7954 -0
- gebpy/modules/ore.py +1648 -0
- gebpy/modules/organics.py +530 -0
- gebpy/modules/oxides.py +9057 -0
- gebpy/modules/petrophysics.py +98 -0
- gebpy/modules/phosphates.py +589 -0
- gebpy/modules/phospides.py +194 -0
- gebpy/modules/plotting.py +619 -0
- gebpy/modules/pyllosilicates.py +380 -0
- gebpy/modules/sedimentary_rocks.py +908 -0
- gebpy/modules/sequences.py +2166 -0
- gebpy/modules/series.py +1625 -0
- gebpy/modules/silicates.py +11102 -0
- gebpy/modules/siliciclastics.py +1846 -0
- gebpy/modules/subsurface_2d.py +179 -0
- gebpy/modules/sulfates.py +1629 -0
- gebpy/modules/sulfides.py +4786 -0
- gebpy/plotting/__init__.py +0 -0
- gebpy/ui_nb/__init__.py +0 -0
- gebpy/user_data/.gitkeep +0 -0
- gebpy-1.1.3.dist-info/LICENSE +165 -0
- gebpy-1.1.3.dist-info/METADATA +207 -0
- gebpy-1.1.3.dist-info/RECORD +254 -0
- gebpy-1.1.3.dist-info/WHEEL +5 -0
- gebpy-1.1.3.dist-info/entry_points.txt +2 -0
- gebpy-1.1.3.dist-info/top_level.txt +1 -0
- modules/__init__.py +0 -0
- modules/carbonates.py +2658 -0
- modules/chemistry.py +1369 -0
- modules/core.py +1805 -0
- modules/elements.py +317 -0
- modules/evaporites.py +1299 -0
- modules/exploration.py +765 -0
- modules/fluids.py +339 -0
- modules/geochemistry.py +1727 -0
- modules/geophysics.py +337 -0
- modules/gui.py +9093 -0
- modules/gui_elements.py +145 -0
- modules/halides.py +485 -0
- modules/igneous.py +2196 -0
- modules/metamorphics.py +2699 -0
- modules/mineralogy.py +442 -0
- modules/minerals.py +7954 -0
- modules/ore.py +1628 -0
- modules/organics.py +530 -0
- modules/oxides.py +9057 -0
- modules/petrophysics.py +98 -0
- modules/phosphates.py +589 -0
- modules/phospides.py +194 -0
- modules/plotting.py +619 -0
- modules/pyllosilicates.py +380 -0
- modules/sedimentary_rocks.py +908 -0
- modules/sequences.py +2166 -0
- modules/series.py +1625 -0
- modules/silicates.py +11102 -0
- modules/siliciclastics.py +1830 -0
- modules/subsurface_2d.py +179 -0
- modules/sulfates.py +1629 -0
- modules/sulfides.py +4786 -0
- notebooks/__init__.py +0 -0
gebpy/modules/core.py
ADDED
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#!/usr/bin/env python
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# -*-coding: utf-8 -*-
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#-----------------------------------------------
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# Name: core.py
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# Author: Maximilian A. Beeskow
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# Version: 1.0
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# Date: 13.01.2021
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#-----------------------------------------------
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## MODULES
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import numpy as np
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from scipy import constants
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from numpy import round
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import sys
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from random import *
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from modules import minerals
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from modules.elements import elements
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import matplotlib.pyplot as plt
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from modules.geochemistry import elementanalysis
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from modules import siliciclastics, carbonates, igneous, evaporites
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from modules import fluids
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## CONSTANTS / PROPERTIES
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pi = constants.pi
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avogadro = constants.Avogadro
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class sample:
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#
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def __init__(self, sequences, radius):
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self.sequences = sequences
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self.radius = radius
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#
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def createCore(self):
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volume = []
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for i in range(0, len(self.sequences)):
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volume.append(pi*self.radius**2*self.sequences[i][1])
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#
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mass = []
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for i in range(0, len(volume)):
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mass.append(volume[i]*self.sequences[i][4]*1000)
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#
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data = []
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for i in range(0, len(volume)):
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data.append([self.sequences[i][0], volume[i], mass[i], self.sequences[i][4], self.sequences[i][9]])
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#
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# WRITING A CSV FILE
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#
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try:
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SequencyStratigraphy = open("./outputs/SequenceStratigraphy.csv", "w")
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except:
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print("Error")
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sys.exit(0)
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SequencyStratigraphy.write(str("ROCK") + "," + str("THICKNESS") + "," + str("TOP") + "," + str("BOTTOM") + "," + str("RHOB") + "," + str("VP") + "," + str("VS") + "," + str("GR") + "," + str("PHIN") + "," + str("FLUID") + "," + str("POISSON") + "," + str("PE") + "\n")
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for i in range(0, len(self.sequences)):
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SequencyStratigraphy.write(str(self.sequences[i][0]) + "," + str(self.sequences[i][1]) + "," + str(self.sequences[i][2]) + "," + str(self.sequences[i][3]) + "," + str(self.sequences[i][4]) + "," + str(self.sequences[i][5][0]) + "," + str(self.sequences[i][5][1]) + "," + str(self.sequences[i][6]) + "," + str(self.sequences[i][7]) + "," + str(self.sequences[i][8]) + "," + str(self.sequences[i][10]) + "," + str(self.sequences[i][11]) + "\n")
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#
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try:
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RockProperties_Sandstone = open("./outputs/RockProperties_Sandstone.csv", "w")
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except:
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print("Error")
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sys.exit(0)
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RockProperties_Sandstone.write(str("ROCK") + "," + str("THICKNESS") + "," + str("TOP") + "," + str("BOTTOM") + "," + str("RHOB") + "," + str("VP") + "," + str("VS") + "," + str("GR") + "," + str("PHIN") + "," + str("FLUID") + "," + str("POISSON") + "," + str("Qz") + "," + str("Cal") + "," + str("Dol") + "," + str("Kfs") + "," + str("Pl") + "," + str("Bt") + "," + str("Glt") + "," + str("R(Core)") + "," + str("V(Core)") + "," + str("m(Core)") + "," + str("w(Qz)") + "," + str("w(Cal)") + "," + str("w(Dol)") + "," + str("w(Kfs)") + "," + str("w(Pl)") + "," + str("w(Bt)") + "," + str("w(Glt)") + "\n")
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for i in range(0, len(self.sequences)):
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if self.sequences[i][0] == "sandstone":
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VCore = pi*self.radius**2*self.sequences[i][1]
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mCore = pi*self.radius**2*self.sequences[i][1]*self.sequences[i][4]*1000
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RockProperties_Sandstone.write(str(self.sequences[i][0]) + "," + str(self.sequences[i][1]) + "," + str(self.sequences[i][2]) + "," + str(self.sequences[i][3]) + "," + str(self.sequences[i][4]) + "," + str(self.sequences[i][5][0]) + "," + str(self.sequences[i][5][1]) + "," + str(self.sequences[i][6]) + "," + str(self.sequences[i][7]) + "," + str(self.sequences[i][8]) + "," + str(self.sequences[i][10]) + "," + str(self.sequences[i][9][0][1]) + "," + str(self.sequences[i][9][1][1]) + "," + str(self.sequences[i][9][2][1]) + "," + str(self.sequences[i][9][3][1]) + "," + str(self.sequences[i][9][4][1]) + "," + str(self.sequences[i][9][5][1]) + "," + str(self.sequences[i][9][6][1]) + "," + str(self.radius) + "," + str(VCore) + "," + str(mCore) + "," + str(self.sequences[i][9][0][1]) + "," + str(self.sequences[i][9][1][1]) + "," + str(self.sequences[i][9][2][1]) + "," + str(self.sequences[i][9][3][1]) + "," + str(self.sequences[i][9][4][1]) + "," + str(self.sequences[i][9][5][1]) + "," + str(self.sequences[i][9][6][1]) + "\n")
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#
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try:
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RockProperties_Limestone = open("./outputs/RockProperties_Limestone.csv", "w")
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except:
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print("Error")
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sys.exit(0)
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RockProperties_Limestone.write(str("ROCK") + "," + str("THICKNESS") + "," + str("TOP") + "," + str("BOTTOM") + "," + str("RHOB") + "," + str("VP") + "," + str("VS") + "," + str("GR") + "," + str("PHIN") + "," + str("FLUID") + "," + str("POISSON") + "," + str("Cal") + "," + str("Dol") + "," + str("Sd") + "," + str("Qz") + "," + str("Kfs") + "," + str("Pl") + "," + str("Kln") + "," + str("Chl") + "," + str("Ilt") + "," + str("R(Core)") + "," + str("V(Core)") + "," + str("m(Core)") + "," + str("m(Cal)") + "," + str("m(Dol)") + "," + str("m(Sd)") + "," + str("m(Qz)") + "," + str("m(Kfs)") + "," + str("m(Pl)") + "," + str("m(Kln)") + "," + str("m(Chl)") + "," + str("m(Ilt)") + "\n")
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for i in range(0, len(self.sequences)):
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if self.sequences[i][0] == "limestone":
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VCore = pi * self.radius ** 2 * self.sequences[i][1]
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mCore = pi * self.radius ** 2 * self.sequences[i][1] * self.sequences[i][4] * 1000
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|
+
RockProperties_Limestone.write(str(self.sequences[i][0]) + "," + str(self.sequences[i][1]) + "," + str(self.sequences[i][2]) + "," + str(self.sequences[i][3]) + "," + str(self.sequences[i][4]) + "," + str(self.sequences[i][5][0]) + "," + str(self.sequences[i][5][1]) + "," + str(self.sequences[i][6]) + "," + str(self.sequences[i][7]) + "," + str(self.sequences[i][8]) + "," + str(self.sequences[i][10]) + "," + str(self.sequences[i][9][0][1]) + "," + str(self.sequences[i][9][1][1]) + "," + str(self.sequences[i][9][2][1]) + "," + str(self.sequences[i][9][3][1]) + "," + str(self.sequences[i][9][4][1]) + "," + str(self.sequences[i][9][5][1]) + "," + str(self.sequences[i][9][6][1]) + "," + str(self.sequences[i][9][7][1]) + "," + str(self.sequences[i][9][8][1]) + "," + str(self.radius) + "," + str(VCore) + "," + str(mCore) + "," + str(mCore*self.sequences[i][9][0][1]) + "," + str(mCore*self.sequences[i][9][1][1]) + "," + str(mCore*self.sequences[i][9][2][1]) + "," + str(mCore*self.sequences[i][9][3][1]) + "," + str(mCore*self.sequences[i][9][4][1]) + "," + str(mCore*self.sequences[i][9][5][1]) + "," + str(mCore*self.sequences[i][9][6][1]) + "," + str(mCore*self.sequences[i][9][7][1]) + "," + str(mCore*self.sequences[i][9][8][1]) + "\n")
|
|
83
|
+
#
|
|
84
|
+
try:
|
|
85
|
+
RockProperties_Dolomite = open("./outputs/RockProperties_Dolomite.csv", "w")
|
|
86
|
+
except:
|
|
87
|
+
print("Error")
|
|
88
|
+
sys.exit(0)
|
|
89
|
+
RockProperties_Dolomite.write(str("ROCK") + "," + str("THICKNESS") + "," + str("TOP") + "," + str("BOTTOM") + "," + str("RHOB") + "," + str("VP") + "," + str("VS") + "," + str("GR") + "," + str("PHIN") + "," + str("FLUID") + "," + str("POISSON") + "," + str("Cal") + "," + str("Dol") + "," + str("Mgs") + "," + str("Qz") + "," + str("Kfs") + "," + str("Pl") + "," + str("Kln") + "," + str("Chl") + "," + str("Ilt") + "," + str("R(Core)") + "," + str("V(Core)") + "," + str("m(Core)") + "," + str("m(Cal)") + "," + str("m(Dol)") + "," + str("m(Mgs)") + "," + str("m(Qz)") + "," + str("m(Kfs)") + "," + str("m(Pl)") + "," + str("m(Kln)") + "," + str("m(Chl)") + "," + str("m(Ilt)") + "\n")
|
|
90
|
+
for i in range(0, len(self.sequences)):
|
|
91
|
+
if self.sequences[i][0] == "dolomite":
|
|
92
|
+
VCore = pi * self.radius ** 2 * self.sequences[i][1]
|
|
93
|
+
mCore = pi * self.radius ** 2 * self.sequences[i][1] * self.sequences[i][4] * 1000
|
|
94
|
+
RockProperties_Dolomite.write(str(self.sequences[i][0]) + "," + str(self.sequences[i][1]) + "," + str(self.sequences[i][2]) + "," + str(self.sequences[i][3]) + "," + str(self.sequences[i][4]) + "," + str(self.sequences[i][5][0]) + "," + str(self.sequences[i][5][1]) + "," + str(self.sequences[i][6]) + "," + str(self.sequences[i][7]) + "," + str(self.sequences[i][8]) + "," + str(self.sequences[i][10]) + "," + str(self.sequences[i][9][0][1]) + "," + str(self.sequences[i][9][1][1]) + "," + str(self.sequences[i][9][2][1]) + "," + str(self.sequences[i][9][3][1]) + "," + str(self.sequences[i][9][4][1]) + "," + str(self.sequences[i][9][5][1]) + "," + str(self.sequences[i][9][6][1]) + "," + str(self.sequences[i][9][7][1]) + "," + str(self.sequences[i][9][8][1]) + "," + str(self.radius) + "," + str(VCore) + "," + str(mCore) + "," + str(mCore*self.sequences[i][9][0][1]) + "," + str(mCore*self.sequences[i][9][1][1]) + "," + str(mCore*self.sequences[i][9][2][1]) + "," + str(mCore*self.sequences[i][9][3][1]) + "," + str(mCore*self.sequences[i][9][4][1]) + "," + str(mCore*self.sequences[i][9][5][1]) + "," + str(mCore*self.sequences[i][9][6][1]) + "," + str(mCore*self.sequences[i][9][7][1]) + "," + str(mCore*self.sequences[i][9][8][1]) + "\n")
|
|
95
|
+
#
|
|
96
|
+
try:
|
|
97
|
+
RockProperties_Shale = open("./outputs/RockProperties_Shale.csv", "w")
|
|
98
|
+
except:
|
|
99
|
+
print("Error")
|
|
100
|
+
sys.exit(0)
|
|
101
|
+
RockProperties_Shale.write(str("ROCK") + "," + str("THICKNESS") + "," + str("TOP") + "," + str("BOTTOM") + "," + str("RHOB") + "," + str("VP") + "," + str("VS") + "," + str("GR") + "," + str("PHIN") + "," + str("FLUID") + "," + str("POISSON") + "," + str("Qz") + "," + str("Kln") + "," + str("Chl") + "," + str("Ilt") + "," + str("Cal") + "," + str("Dol") + "," + str("Kfs") + "," + str("Pl") + "," + str("R(Core)") + "," + str("V(Core)") + "," + str("m(Core)") + "," + str("m(Qz)") + "," + str("m(Kln)") + "," + str("m(Chl)") + "," + str("m(Ilt)") + "," + str("m(Cal)") + "," + str("m(Dol)") + "," + str("m(Kfs)") + "," + str("m(Pl)") + "\n")
|
|
102
|
+
for i in range(0, len(self.sequences)):
|
|
103
|
+
if self.sequences[i][0] == "shale":
|
|
104
|
+
VCore = pi * self.radius ** 2 * self.sequences[i][1]
|
|
105
|
+
mCore = pi * self.radius ** 2 * self.sequences[i][1] * self.sequences[i][4] * 1000
|
|
106
|
+
RockProperties_Shale.write(str(self.sequences[i][0]) + "," + str(self.sequences[i][1]) + "," + str(self.sequences[i][2]) + "," + str(self.sequences[i][3]) + "," + str(self.sequences[i][4]) + "," + str(self.sequences[i][5][0]) + "," + str(self.sequences[i][5][1]) + "," + str(self.sequences[i][6]) + "," + str(self.sequences[i][7]) + "," + str(self.sequences[i][8]) + "," + str(self.sequences[i][10]) + "," + str(self.sequences[i][9][0][1]) + "," + str(self.sequences[i][9][1][1]) + "," + str(self.sequences[i][9][2][1]) + "," + str(self.sequences[i][9][3][1]) + "," + str(self.sequences[i][9][4][1]) + "," + str(self.sequences[i][9][5][1]) + "," + str(self.sequences[i][9][6][1]) + "," + str(self.sequences[i][9][7][1]) + "," + str(self.radius) + "," + str(VCore) + "," + str(mCore) + "," + str(mCore*self.sequences[i][9][0][1]) + "," + str(mCore*self.sequences[i][9][1][1]) + "," + str(mCore*self.sequences[i][9][2][1]) + "," + str(mCore*self.sequences[i][9][3][1]) + "," + str(mCore*self.sequences[i][9][4][1]) + "," + str(mCore*self.sequences[i][9][5][1]) + "," + str(mCore*self.sequences[i][9][6][1]) + "," + str(mCore*self.sequences[i][9][7][1]) + "\n")
|
|
107
|
+
#
|
|
108
|
+
try:
|
|
109
|
+
RockProperties_Halite = open("./outputs/RockProperties_Halite.csv", "w")
|
|
110
|
+
except:
|
|
111
|
+
print("Error")
|
|
112
|
+
sys.exit(0)
|
|
113
|
+
RockProperties_Halite.write(str("ROCK") + "," + str("THICKNESS") + "," + str("TOP") + "," + str("BOTTOM") + "," + str("RHOB") + "," + str("VP") + "," + str("VS") + "," + str("GR") + "," + str("PHIN") + "," + str("FLUID") + "," + str("POISSON") + "," + str("Hl") + "," + str("Anh") + "," + str("Gp") + "," + str("Syl") + "," + str("Ilt") + "," + str("R(Core)") + "," + str("V(Core)") + "," + str("m(Core)") + "," + str("m(Hl)") + "," + str("m(Anh)") + "," + str("m(Gp)") + "," + str("m(Syl)") + "," + str("m(Ilt)") + "\n")
|
|
114
|
+
for i in range(0, len(self.sequences)):
|
|
115
|
+
if self.sequences[i][0] == "halite":
|
|
116
|
+
VCore = pi * self.radius ** 2 * self.sequences[i][1]
|
|
117
|
+
mCore = pi * self.radius ** 2 * self.sequences[i][1] * self.sequences[i][4] * 1000
|
|
118
|
+
RockProperties_Halite.write(str(self.sequences[i][0]) + "," + str(self.sequences[i][1]) + "," + str(self.sequences[i][2]) + "," + str(self.sequences[i][3]) + "," + str(self.sequences[i][4]) + "," + str(self.sequences[i][5][0]) + "," + str(self.sequences[i][5][1]) + "," + str(self.sequences[i][6]) + "," + str(self.sequences[i][7]) + "," + str(self.sequences[i][8]) + "," + str(self.sequences[i][10]) + "," + str(self.sequences[i][9][0][1]) + "," + str(self.sequences[i][9][1][1]) + "," + str(self.sequences[i][9][2][1]) + "," + str(self.sequences[i][9][3][1]) + "," + str(self.sequences[i][9][4][1]) + "," + str(self.radius) + "," + str(VCore) + "," + str(mCore) + "," + str(mCore*self.sequences[i][9][0][1]) + "," + str(mCore*self.sequences[i][9][1][1]) + "," + str(mCore*self.sequences[i][9][2][1]) + "," + str(mCore*self.sequences[i][9][3][1]) + "," + str(mCore*self.sequences[i][9][4][1]) + "\n")
|
|
119
|
+
#
|
|
120
|
+
try:
|
|
121
|
+
RockProperties_Anhydrite = open("./outputs/RockProperties_Anhydrite.csv", "w")
|
|
122
|
+
except:
|
|
123
|
+
print("Error")
|
|
124
|
+
sys.exit(0)
|
|
125
|
+
RockProperties_Anhydrite.write(str("ROCK") + "," + str("THICKNESS") + "," + str("TOP") + "," + str("BOTTOM") + "," + str("RHOB") + "," + str("VP") + "," + str("VS") + "," + str("GR") + "," + str("PHIN") + "," + str("FLUID") + "," + str("POISSON") + "," + str("Anh") + "," + str("Hl") + "," + str("Cal") + "," + str("Gn") + "," + str("Ccp") + "," + str("Mol") + "," + str("Py") + "," + str("R(Core)") + "," + str("V(Core)") + "," + str("m(Core)") + "," + str("m(Anh)") + "," + str("m(Hl)") + "," + str("m(Cal)") + "," + str("m(Gn)") + "," + str("m(Ccp)") + "," + str("m(Mol)") + "," + str("m(Py)") + "\n")
|
|
126
|
+
for i in range(0, len(self.sequences)):
|
|
127
|
+
if self.sequences[i][0] == "anhydrite":
|
|
128
|
+
VCore = pi * self.radius ** 2 * self.sequences[i][1]
|
|
129
|
+
mCore = pi * self.radius ** 2 * self.sequences[i][1] * self.sequences[i][4] * 1000
|
|
130
|
+
RockProperties_Anhydrite.write(str(self.sequences[i][0]) + "," + str(self.sequences[i][1]) + "," + str(self.sequences[i][2]) + "," + str(self.sequences[i][3]) + "," + str(self.sequences[i][4]) + "," + str(self.sequences[i][5][0]) + "," + str(self.sequences[i][5][1]) + "," + str(self.sequences[i][6]) + "," + str(self.sequences[i][7]) + "," + str(self.sequences[i][8]) + "," + str(self.sequences[i][10]) + "," + str(self.sequences[i][9][0][1]) + "," + str(self.sequences[i][9][1][1]) + "," + str(self.sequences[i][9][2][1]) + "," + str(self.sequences[i][9][3][1]) + "," + str(self.sequences[i][9][4][1]) + "," + str(self.sequences[i][9][5][1]) + "," + str(self.sequences[i][9][6][1]) + "," + str(self.radius) + "," + str(VCore) + "," + str(mCore) + "," + str(mCore*self.sequences[i][9][0][1]) + "," + str(mCore*self.sequences[i][9][1][1]) + "," + str(mCore*self.sequences[i][9][2][1]) + "," + str(mCore*self.sequences[i][9][3][1]) + "," + str(mCore*self.sequences[i][9][4][1]) + "," + str(mCore*self.sequences[i][9][5][1]) + "," + str(mCore*self.sequences[i][9][6][1]) + "\n")
|
|
131
|
+
#
|
|
132
|
+
try:
|
|
133
|
+
RockProperties_Granite = open("./outputs/RockProperties_Granite.csv", "w")
|
|
134
|
+
except:
|
|
135
|
+
print("Error")
|
|
136
|
+
sys.exit(0)
|
|
137
|
+
RockProperties_Granite.write(str("ROCK") + "," + str("THICKNESS") + "," + str("TOP") + "," + str("BOTTOM") + "," + str("RHOB") + "," + str("VP") + "," + str("VS") + "," + str("GR") + "," + str("PHIN") + "," + str("FLUID") + "," + str("POISSON") + "," + str("Qz") + "," + str("Or") + "," + str("Ab") + "," + str("An") + "," + str("Bt") + "," + str("Ms") + "," + str("Py") + "," + str("R(Core)") + "," + str("V(Core)") + "," + str("m(Core)") + "," + str("m(Qz)") + "," + str("m(Or)") + "," + str("m(Ab)") + "," + str("m(An)") + "," + str("m(Bt)") + "," + str("m(Ms)") + "," + str("m(Py)") + "\n")
|
|
138
|
+
for i in range(0, len(self.sequences)):
|
|
139
|
+
if self.sequences[i][0] == "granite":
|
|
140
|
+
VCore = pi * self.radius ** 2 * self.sequences[i][1]
|
|
141
|
+
mCore = pi * self.radius ** 2 * self.sequences[i][1] * self.sequences[i][4] * 1000
|
|
142
|
+
RockProperties_Granite.write(str(self.sequences[i][0]) + "," + str(self.sequences[i][1]) + "," + str(self.sequences[i][2]) + "," + str(self.sequences[i][3]) + "," + str(self.sequences[i][4]) + "," + str(self.sequences[i][5][0]) + "," + str(self.sequences[i][5][1]) + "," + str(self.sequences[i][6]) + "," + str(self.sequences[i][7]) + "," + str(self.sequences[i][8]) + "," + str(self.sequences[i][10]) + "," + str(self.sequences[i][9][0][1]) + "," + str(self.sequences[i][9][1][1]) + "," + str(self.sequences[i][9][2][1]) + "," + str(self.sequences[i][9][3][1]) + "," + str(self.sequences[i][9][4][1]) + "," + str(self.sequences[i][9][5][1]) + "," + str(self.sequences[i][9][6][1]) + "," + str(self.radius) + "," + str(VCore) + "," + str(mCore) + "," + str(mCore*self.sequences[i][9][0][1]) + "," + str(mCore*self.sequences[i][9][1][1]) + "," + str(mCore*self.sequences[i][9][2][1]) + "," + str(mCore*self.sequences[i][9][3][1]) + "," + str(mCore*self.sequences[i][9][4][1]) + "," + str(mCore*self.sequences[i][9][5][1]) + "," + str(mCore*self.sequences[i][9][6][1]) + "\n")
|
|
143
|
+
#
|
|
144
|
+
try:
|
|
145
|
+
RockProperties_Basalt = open("./outputs/RockProperties_Basalt.csv", "w")
|
|
146
|
+
except:
|
|
147
|
+
print("Error")
|
|
148
|
+
sys.exit(0)
|
|
149
|
+
RockProperties_Basalt.write(str("ROCK") + "," + str("THICKNESS") + "," + str("TOP") + "," + str("BOTTOM") + "," + str("RHOB") + "," + str("VP") + "," + str("VS") + "," + str("GR") + "," + str("PHIN") + "," + str("FLUID") + "," + str("POISSON") + "," + str("Pl") + "," + str("En") + "," + str("Fs") + "," + str("Bt") + "," + str("Act") + "," + str("Tr") + "," + str("Ol") + "," + str("R(Core)") + "," + str("V(Core)") + "," + str("m(Core)") + "," + str("m(Pl)") + "," + str("m(En)") + "," + str("m(Fs)") + "," + str("m(Bt)") + "," + str("m(Act)") + "," + str("m(Tr)") + "," + str("m(Ol)") + "\n")
|
|
150
|
+
for i in range(0, len(self.sequences)):
|
|
151
|
+
if self.sequences[i][0] == "basalt":
|
|
152
|
+
VCore = pi * self.radius ** 2 * self.sequences[i][1]
|
|
153
|
+
mCore = pi * self.radius ** 2 * self.sequences[i][1] * self.sequences[i][4] * 1000
|
|
154
|
+
RockProperties_Basalt.write(str(self.sequences[i][0]) + "," + str(self.sequences[i][1]) + "," + str(self.sequences[i][2]) + "," + str(self.sequences[i][3]) + "," + str(self.sequences[i][4]) + "," + str(self.sequences[i][5][0]) + "," + str(self.sequences[i][5][1]) + "," + str(self.sequences[i][6]) + "," + str(self.sequences[i][7]) + "," + str(self.sequences[i][8]) + "," + str(self.sequences[i][10]) + "," + str(self.sequences[i][9][0][1]) + "," + str(self.sequences[i][9][1][1]) + "," + str(self.sequences[i][9][2][1]) + "," + str(self.sequences[i][9][3][1]) + "," + str(self.sequences[i][9][4][1]) + "," + str(self.sequences[i][9][5][1]) + "," + str(self.sequences[i][9][6][1]) + "," + str(self.radius) + "," + str(VCore) + "," + str(mCore) + "," + str(mCore*self.sequences[i][9][0][1]) + "," + str(mCore*self.sequences[i][9][1][1]) + "," + str(mCore*self.sequences[i][9][2][1]) + "," + str(mCore*self.sequences[i][9][3][1]) + "," + str(mCore*self.sequences[i][9][4][1]) + "," + str(mCore*self.sequences[i][9][5][1]) + "," + str(mCore*self.sequences[i][9][6][1]) + "\n")
|
|
155
|
+
#
|
|
156
|
+
try:
|
|
157
|
+
RockProperties_Ore_Fe = open("./outputs/RockProperties_Ore_Fe.csv", "w")
|
|
158
|
+
except:
|
|
159
|
+
print("Error")
|
|
160
|
+
sys.exit(0)
|
|
161
|
+
RockProperties_Ore_Fe.write(str("ROCK") + "," + str("THICKNESS") + "," + str("TOP") + "," + str("BOTTOM") + "," + str("RHOB") + "," + str("VP") + "," + str("VS") + "," + str("GR") + "," + str("PHIN") + "," + str("FLUID") + "," + str("POISSON") + "," + str("Mag") + "," + str("Hem") + "," + str("Qz") + "," + str("Cal") + "," + str("Kfs") + "," + str("Pl") + "," + str("R(Core)") + "," + str("V(Core)") + "," + str("m(Core)") + "," + str("m(Mag)") + "," + str("m(Hem)") + "," + str("m(Qz)") + "," + str("m(Cal)") + "," + str("m(Kfs)") + "," + str("m(Pl)") + "\n")
|
|
162
|
+
for i in range(0, len(self.sequences)):
|
|
163
|
+
if self.sequences[i][0] == "ore":
|
|
164
|
+
VCore = pi * self.radius ** 2 * self.sequences[i][1]
|
|
165
|
+
mCore = pi * self.radius ** 2 * self.sequences[i][1] * self.sequences[i][4] * 1000
|
|
166
|
+
RockProperties_Ore_Fe.write(str(self.sequences[i][0]) + "," + str(self.sequences[i][1]) + "," + str(self.sequences[i][2]) + "," + str(self.sequences[i][3]) + "," + str(self.sequences[i][4]) + "," + str(self.sequences[i][5][0]) + "," + str(self.sequences[i][5][1]) + "," + str(self.sequences[i][6]) + "," + str(self.sequences[i][7]) + "," + str(self.sequences[i][8]) + "," + str(self.sequences[i][10]) + "," + str(self.sequences[i][9][0][1]) + "," + str(self.sequences[i][9][1][1]) + "," + str(self.sequences[i][9][2][1]) + "," + str(self.sequences[i][9][3][1]) + "," + str(self.sequences[i][9][4][1]) + "," + str(self.sequences[i][9][5][1]) + "," + str(self.radius) + "," + str(VCore) + "," + str(mCore) + "," + str(mCore*self.sequences[i][9][0][1]) + "," + str(mCore*self.sequences[i][9][1][1]) + "," + str(mCore*self.sequences[i][9][2][1]) + "," + str(mCore*self.sequences[i][9][3][1]) + "," + str(mCore*self.sequences[i][9][4][1]) + "," + str(mCore*self.sequences[i][9][5][1]) + "\n")
|
|
167
|
+
#
|
|
168
|
+
return data
|
|
169
|
+
#
|
|
170
|
+
class geochemistry:
|
|
171
|
+
#
|
|
172
|
+
def __init__(self, input, sequences):
|
|
173
|
+
self.input = input
|
|
174
|
+
self.sequences = sequences
|
|
175
|
+
#
|
|
176
|
+
def calculateConcentration(self):
|
|
177
|
+
# [symbol, atomic number, atomic mass, molar volume, density, bulk modulus, shear modulus, young's modulus, vP, vS]
|
|
178
|
+
chemH = elements.H(self)
|
|
179
|
+
chemO = elements.O(self)
|
|
180
|
+
chemSi = elements.Si(self)
|
|
181
|
+
chemCa = elements.Ca(self)
|
|
182
|
+
chemC = elements.C(self)
|
|
183
|
+
chemMg = elements.Mg(self)
|
|
184
|
+
chemK = elements.K(self)
|
|
185
|
+
chemAl = elements.Al(self)
|
|
186
|
+
chemMn = elements.Mn(self)
|
|
187
|
+
chemFe = elements.Fe(self)
|
|
188
|
+
chemNa = elements.Na(self)
|
|
189
|
+
chemCl = elements.Cl(self)
|
|
190
|
+
chemS = elements.S(self)
|
|
191
|
+
chemF = elements.F(self)
|
|
192
|
+
chemPb = elements.Pb(self)
|
|
193
|
+
chemMo = elements.Mo(self)
|
|
194
|
+
chemCu = elements.Cu(self)
|
|
195
|
+
# [molar mass, density, bulk modulus, shear modulus, vP, vS, GR]
|
|
196
|
+
# Oxides
|
|
197
|
+
chemQuartz = minerals.oxides.quartz("")
|
|
198
|
+
chem_chromite = minerals.oxides.chromite("")
|
|
199
|
+
chem_spinel = minerals.oxides.spinel("")
|
|
200
|
+
chem_magnetite = minerals.oxides.magnetite("")
|
|
201
|
+
chem_hematite = minerals.oxides.hematite("")
|
|
202
|
+
chem_boehmite = minerals.oxides.boehmite("")
|
|
203
|
+
chem_diaspore = minerals.oxides.diaspore("")
|
|
204
|
+
chem_gibbsite = minerals.oxides.gibbsite("")
|
|
205
|
+
chem_uraninite = minerals.oxides.uraninite("")
|
|
206
|
+
chem_cuprite = minerals.oxides.cuprite("")
|
|
207
|
+
# Carbonates
|
|
208
|
+
chemDolomite = minerals.carbonates.dolomite("")
|
|
209
|
+
chemCalcite = minerals.carbonates.calcite("")
|
|
210
|
+
chemSiderite = minerals.carbonates.siderite("")
|
|
211
|
+
chemMagnesite = minerals.carbonates.magnesite("")
|
|
212
|
+
chem_ankerite = minerals.carbonates.ankerite("")
|
|
213
|
+
chem_malachite = minerals.carbonates.malachite("")
|
|
214
|
+
chem_aragonite = minerals.carbonates.aragonite("")
|
|
215
|
+
# Tectosilicates
|
|
216
|
+
chemOrthoclase = minerals.tectosilicates.orthoclase("")
|
|
217
|
+
chemAnorthite = minerals.tectosilicates.anorthite("")
|
|
218
|
+
chemAlbite = minerals.tectosilicates.albite("")
|
|
219
|
+
chemAlkalifeldspar = minerals.feldspars.alkalifeldspar(self, "Alkalifeldspar")
|
|
220
|
+
chemPlagioclase = minerals.feldspars.plagioclase(self, "Plagioclase")
|
|
221
|
+
chem_alkalifeldspar_granite = minerals.feldspars.alkalifeldspar(self, "K")
|
|
222
|
+
chem_plagioclase_granite = minerals.feldspars.plagioclase(self, "Na")
|
|
223
|
+
chem_scapolite = minerals.tectosilicates.scapolite(self, "Scapolite")
|
|
224
|
+
# Inosilicates
|
|
225
|
+
chem_actinolite = minerals.inosilicates.actinolite("")
|
|
226
|
+
chem_tremolite = minerals.inosilicates.tremolite("")
|
|
227
|
+
chem_enstatite = minerals.inosilicates.enstatite("")
|
|
228
|
+
chem_ferrosilite = minerals.inosilicates.ferrosilite("")
|
|
229
|
+
chem_augite = minerals.inosilicates.augite("")
|
|
230
|
+
chem_diopside = minerals.inosilicates.diopside("")
|
|
231
|
+
chem_aegirine = minerals.inosilicates.aegirine("")
|
|
232
|
+
chem_hedenbergite = minerals.inosilicates.hedenbergite("")
|
|
233
|
+
# Phyllosilicates
|
|
234
|
+
chemBiotite = minerals.phyllosilicates.biotite("")
|
|
235
|
+
chemGlauconite = minerals.phyllosilicates.glauconite("")
|
|
236
|
+
chemChlorite = minerals.phyllosilicates.chamosite("")
|
|
237
|
+
chemIllite = minerals.phyllosilicates.illite("")
|
|
238
|
+
chemMuscovite = minerals.phyllosilicates.muscovite("")
|
|
239
|
+
chemKaolinite = minerals.phyllosilicates.kaolinite("")
|
|
240
|
+
chem_biotite = minerals.Biotites.biotite_group(self, "Biotite")
|
|
241
|
+
chem_clinochlore = minerals.phyllosilicates.clinochlore("")
|
|
242
|
+
chem_montmorillonite = minerals.phyllosilicates.montmorillonite("")
|
|
243
|
+
# Nesosilicates
|
|
244
|
+
chem_olivine = minerals.nesosilicates.olivine(self, "Olivine")
|
|
245
|
+
chem_garnet_pyralspite = minerals.nesosilicates.garnet_pyralspite(self)
|
|
246
|
+
chem_garnet_ugrandite = minerals.nesosilicates.garnet_ugrandite(self)
|
|
247
|
+
# Halides
|
|
248
|
+
chemHalite = minerals.halides.halite("")
|
|
249
|
+
chem_fluorite = minerals.halides.fluorite("")
|
|
250
|
+
chemSylvite = minerals.halides.sylvite("")
|
|
251
|
+
chem_carobbiite = minerals.halides.carobbiite("")
|
|
252
|
+
# Sulfates
|
|
253
|
+
chemAnhydrite = minerals.sulfates.anhydrite("")
|
|
254
|
+
chemGypsum = minerals.sulfates.gypsum("")
|
|
255
|
+
chem_scheelite = minerals.sulfates.scheelite("")
|
|
256
|
+
chem_barite = minerals.sulfates.barite("")
|
|
257
|
+
# Sulfides
|
|
258
|
+
chemPyrite = minerals.sulfides.pyrite("")
|
|
259
|
+
chem_bornite = minerals.sulfides.bornite("")
|
|
260
|
+
chemGalena = minerals.sulfides.galena("")
|
|
261
|
+
chemChalcopyrite = minerals.sulfides.chalcopyrite("")
|
|
262
|
+
chemMolybdenite = minerals.sulfides.molybdenite("")
|
|
263
|
+
chem_stibnite = minerals.sulfides.stibnite("")
|
|
264
|
+
chem_arsenopyrite = minerals.sulfides.arsenopyrite("")
|
|
265
|
+
chem_acanthite = minerals.sulfides.acanthite("")
|
|
266
|
+
chem_argentite = minerals.sulfides.argentite("")
|
|
267
|
+
chem_alabandite = minerals.sulfides.alabandite("")
|
|
268
|
+
chem_berthierite = minerals.sulfides.berthierite("")
|
|
269
|
+
chem_pyrrhotite = minerals.sulfides.pyrrhotite("")
|
|
270
|
+
chem_cobaltite = minerals.sulfides.cobaltite("")
|
|
271
|
+
chem_carrollite = minerals.sulfides.carrollite("")
|
|
272
|
+
chem_chalcocite = minerals.sulfides.chalcocite("")
|
|
273
|
+
chem_digenite = minerals.sulfides.digenite("")
|
|
274
|
+
# Antimonides
|
|
275
|
+
chem_allargentum = minerals.antimonides.allargentum("")
|
|
276
|
+
chem_dyscrasite = minerals.antimonides.dyscrasite("")
|
|
277
|
+
# Arsenides
|
|
278
|
+
# Tourmalines
|
|
279
|
+
chem_schorl = minerals.Tourmalines.schorl("")
|
|
280
|
+
chem_dravite = minerals.Tourmalines.dravite("")
|
|
281
|
+
chem_elbaite = minerals.Tourmalines.elbaite("")
|
|
282
|
+
chem_liddicoatite = minerals.Tourmalines.liddicoatite("")
|
|
283
|
+
# Natives
|
|
284
|
+
chem_arsenic = minerals.natives.arsenic("")
|
|
285
|
+
chem_bismuth = minerals.natives.bismuth("")
|
|
286
|
+
# Coltans
|
|
287
|
+
chem_columbite = minerals.Coltans.columbite("")
|
|
288
|
+
chem_tantalite = minerals.Coltans.tantalite("")
|
|
289
|
+
chem_coltan = minerals.Coltans.coltan("")
|
|
290
|
+
|
|
291
|
+
#print(chemCalcite)
|
|
292
|
+
#print(chem_aragonite)
|
|
293
|
+
|
|
294
|
+
# print("Evaporites")
|
|
295
|
+
# data = evaporites.Evaporites("water", 2500)
|
|
296
|
+
# data_rocksalt_01 = data.create_simple_rocksalt()
|
|
297
|
+
# print(data_rocksalt_01)
|
|
298
|
+
# data_anhydrite_01 = data.create_simple_anhydrite()
|
|
299
|
+
# print(data_anhydrite_01)
|
|
300
|
+
|
|
301
|
+
# print("Soils")
|
|
302
|
+
# data = siliciclastics.Soil()
|
|
303
|
+
# data_soil_01 = data.create_simple_soil()
|
|
304
|
+
# print(data_soil_01)
|
|
305
|
+
# data_sand_01 = data.create_simple_sand()
|
|
306
|
+
# print(data_sand_01)
|
|
307
|
+
|
|
308
|
+
# print("Igneous rocks: Plutonics")
|
|
309
|
+
# data = igneous.Plutonic("water", 4000)
|
|
310
|
+
# data_granite_01 = data.create_simple_granite()
|
|
311
|
+
# print(data_granite_01)
|
|
312
|
+
# data_syenite_01 = data.create_simple_syenite()
|
|
313
|
+
# print(data_syenite_01)
|
|
314
|
+
# data_monzonite_01 = data.create_simple_monzonite()
|
|
315
|
+
# print(data_monzonite_01)
|
|
316
|
+
# data_gabbro_01 = data.create_simple_gabbro()
|
|
317
|
+
# print(data_gabbro_01)
|
|
318
|
+
# data_diorite_01 = data.create_simple_diorite()
|
|
319
|
+
# print(data_diorite_01)
|
|
320
|
+
# data_granodiorite_01 = data.create_simple_granodiorite()
|
|
321
|
+
# print(data_granodiorite_01)
|
|
322
|
+
# data_tonalite_01 = data.create_simple_tonalite()
|
|
323
|
+
# print(data_tonalite_01)
|
|
324
|
+
# data_quartzrich_granitoid_01 = data.create_simple_quartzrich_granitoid()
|
|
325
|
+
# print(data_quartzrich_granitoid_01)
|
|
326
|
+
# data_quartzolite_01 = data.create_simple_quartzolite()
|
|
327
|
+
# print(data_quartzolite_01)
|
|
328
|
+
|
|
329
|
+
# print("Igneous rocks: Volcanics")
|
|
330
|
+
# data = igneous.Volcanic("water", 4000)
|
|
331
|
+
# data_basalt_01 = data.create_simple_basalt()
|
|
332
|
+
# print(data_basalt_01)
|
|
333
|
+
# data_andesite_01 = data.create_simple_andesite()
|
|
334
|
+
# print(data_andesite_01)
|
|
335
|
+
# data_latite_01 = data.create_simple_latite()
|
|
336
|
+
# print(data_latite_01)
|
|
337
|
+
# data_trachyte_01 = data.create_simple_trachyte()
|
|
338
|
+
# print(data_trachyte_01)
|
|
339
|
+
# data_rhyolite_01 = data.create_simple_rhyolite()
|
|
340
|
+
# print(data_rhyolite_01)
|
|
341
|
+
# data_dacite_01 = data.create_simple_dacite()
|
|
342
|
+
# print(data_dacite_01)
|
|
343
|
+
|
|
344
|
+
# data = igneous.Plutonic("water", 4000)
|
|
345
|
+
# data_granite_01 = data.create_simple_granite()
|
|
346
|
+
# print(data_granite_01)
|
|
347
|
+
# data_granite_01a = data.create_simple_granite(amounts=data_granite_01[8])
|
|
348
|
+
# print(data_granite_01a)
|
|
349
|
+
# data_granite_01b = data.create_simple_granite(amounts=data_granite_01a[8])
|
|
350
|
+
# print(data_granite_01b)
|
|
351
|
+
# data_granite_01c = data.create_simple_granite(amounts=data_granite_01b[8])
|
|
352
|
+
# print(data_granite_01c)
|
|
353
|
+
# data_granite_01d = data.create_simple_granite(amounts=data_granite_01c[8])
|
|
354
|
+
# print(data_granite_01d)
|
|
355
|
+
#
|
|
356
|
+
# data = siliciclastics.sandstone("water", 100)
|
|
357
|
+
# data_sandstone1 = data.create_simple_sandstone()
|
|
358
|
+
# print(data_sandstone1)
|
|
359
|
+
# data_sandstone1a = data.create_simple_sandstone(amounts=data_sandstone1[8])
|
|
360
|
+
# print(data_sandstone1a)
|
|
361
|
+
# data_sandstone1b = data.create_simple_sandstone(amounts=data_sandstone1a[8])
|
|
362
|
+
# print(data_sandstone1b)
|
|
363
|
+
# data_sandstone1c = data.create_simple_sandstone(amounts=data_sandstone1b[8])
|
|
364
|
+
# print(data_sandstone1c)
|
|
365
|
+
# data_sandstone1d = data.create_simple_sandstone(amounts=data_sandstone1c[8])
|
|
366
|
+
# print(data_sandstone1d)
|
|
367
|
+
# data_sandstone2 = data.create_simple_sandstone(w_Fe=0.1)
|
|
368
|
+
# data_sandstone3 = data.create_simple_sandstone(w_Fe=0.2)
|
|
369
|
+
# data_sandstone4 = data.create_simple_sandstone(w_Fe=0.3)
|
|
370
|
+
# data_sandstone5 = data.create_simple_sandstone(w_Fe=0.4)
|
|
371
|
+
# data_sandstone6 = data.create_simple_sandstone(w_Fe=0.5)
|
|
372
|
+
# print(data_sandstone1)
|
|
373
|
+
# print(data_sandstone2)
|
|
374
|
+
# print(data_sandstone3)
|
|
375
|
+
# print(data_sandstone4)
|
|
376
|
+
# print(data_sandstone5)
|
|
377
|
+
# print(data_sandstone6)
|
|
378
|
+
#
|
|
379
|
+
#data = siliciclastics.shale()
|
|
380
|
+
#data_shale1 = data.create_simple_shale()
|
|
381
|
+
#print(data_shale1)
|
|
382
|
+
#data_shale1a = data.create_simple_shale(amounts=data_shale1[8])
|
|
383
|
+
#print(data_shale1a)
|
|
384
|
+
#data_shale1b = data.create_simple_shale(amounts=data_shale1a[8])
|
|
385
|
+
#print(data_shale1b)
|
|
386
|
+
#data_shale1c = data.create_simple_shale(amounts=data_shale1b[8])
|
|
387
|
+
#print(data_shale1c)
|
|
388
|
+
#data_shale1d = data.create_simple_shale(amounts=data_shale1c[8])
|
|
389
|
+
#print(data_shale1d)
|
|
390
|
+
# data_shale2 = data.create_simple_shale()
|
|
391
|
+
# data_shale3 = data.create_simple_shale()
|
|
392
|
+
# data_shale4 = data.create_simple_shale(w_C=0.05)
|
|
393
|
+
# print(data_shale1)
|
|
394
|
+
# print(data_shale2)
|
|
395
|
+
# print(data_shale3)
|
|
396
|
+
# print(data_shale4)
|
|
397
|
+
#
|
|
398
|
+
# data = carbonates.limestone("water", 100)
|
|
399
|
+
# data_limestone1 = data.create_simple_limestone()
|
|
400
|
+
# print(data_limestone1)
|
|
401
|
+
# data_limestone1a = data.create_simple_limestone(amounts=data_limestone1[8])
|
|
402
|
+
# print(data_limestone1a)
|
|
403
|
+
# data_limestone1b = data.create_simple_limestone(amounts=data_limestone1a[8])
|
|
404
|
+
# print(data_limestone1b)
|
|
405
|
+
# data_limestone1c = data.create_simple_limestone(amounts=data_limestone1b[8])
|
|
406
|
+
# print(data_limestone1c)
|
|
407
|
+
# data_limestone1d = data.create_simple_limestone(amounts=data_limestone1c[8])
|
|
408
|
+
# print(data_limestone1d)
|
|
409
|
+
#data_limestone2 = data.create_simple_limestone(w_K=0.01)
|
|
410
|
+
#print(data_limestone2)
|
|
411
|
+
#data_limestone3 = data.create_simple_limestone(w_Mg=0.05)
|
|
412
|
+
#data_limestone4 = data.create_simple_limestone(w_K=0.05)
|
|
413
|
+
#data_limestone5 = data.create_simple_limestone(w_Ca=0.3)
|
|
414
|
+
#data_limestone6 = data.create_simple_limestone(w_Fe=0.05)
|
|
415
|
+
#print(data_limestone3)
|
|
416
|
+
#print(data_limestone4)
|
|
417
|
+
#print(data_limestone5)
|
|
418
|
+
#print(data_limestone6)
|
|
419
|
+
#
|
|
420
|
+
# data = carbonates.dolomite("water", 100)
|
|
421
|
+
# data_dolomite_01 = data.create_simple_dolomite()
|
|
422
|
+
# print(data_dolomite_01)
|
|
423
|
+
# data_dolomite_01a = data.create_simple_dolomite(amounts=data_dolomite_01[8])
|
|
424
|
+
# print(data_dolomite_01a)
|
|
425
|
+
# data_dolomite_01b = data.create_simple_dolomite(amounts=data_dolomite_01a[8])
|
|
426
|
+
# print(data_dolomite_01b)
|
|
427
|
+
# data_dolomite_01c = data.create_simple_dolomite(amounts=data_dolomite_01b[8])
|
|
428
|
+
# print(data_dolomite_01c)
|
|
429
|
+
# data_dolomite_01d = data.create_simple_dolomite(amounts=data_dolomite_01c[8])
|
|
430
|
+
# print(data_dolomite_01d)
|
|
431
|
+
#data_dolomite_02 = data.create_simple_dolomite(w_Mg=0.1)
|
|
432
|
+
#print(data_dolomite_02)
|
|
433
|
+
#data_dolomite_03 = data.create_simple_dolomite(w_Ca=0.15)
|
|
434
|
+
#print(data_dolomite_03)
|
|
435
|
+
#data_dolomite_04 = data.create_simple_dolomite(w_Fe=0.025)
|
|
436
|
+
#print(data_dolomite_04)
|
|
437
|
+
#
|
|
438
|
+
#data = fluids.Hydrocarbons()
|
|
439
|
+
#data_oil_01 = data.oil()
|
|
440
|
+
#print(data_oil_01)
|
|
441
|
+
#data_gas_01 = data.natural_gas()
|
|
442
|
+
#print(data_gas_01)
|
|
443
|
+
#
|
|
444
|
+
#data = fluids.Water()
|
|
445
|
+
#data_water_01 = data.water()
|
|
446
|
+
#print(data_water_01)
|
|
447
|
+
#
|
|
448
|
+
mineralsSandstone = [chemQuartz, chemCalcite, chemDolomite, chemAlkalifeldspar, chemPlagioclase, chemBiotite, chemGlauconite]
|
|
449
|
+
mineralsShale = [chemQuartz, chemKaolinite, chemChlorite, chemIllite, chemCalcite, chemDolomite, chemAlkalifeldspar, chemPlagioclase]
|
|
450
|
+
mineralsLimestone = [chemCalcite, chemDolomite, chemSiderite, chemQuartz, chemAlkalifeldspar, chemPlagioclase, chemKaolinite, chemChlorite, chemIllite]
|
|
451
|
+
mineralsDolomite = [chemCalcite, chemDolomite, chemMagnesite, chemQuartz, chemAlkalifeldspar, chemPlagioclase, chemKaolinite, chemChlorite, chemIllite]
|
|
452
|
+
mineralsGranite = [chemQuartz, chem_alkalifeldspar_granite, chem_plagioclase_granite, chemBiotite, chemMuscovite, chem_actinolite, chem_tremolite]
|
|
453
|
+
mineralsHalite = [chemHalite, chemAnhydrite, chemGypsum, chemSylvite, chemIllite]
|
|
454
|
+
mineralsAnhydrite = [chemAnhydrite, chemHalite, chemCalcite, chemGalena, chemChalcopyrite, chemMolybdenite, chemPyrite]
|
|
455
|
+
minerals_ore_Fe = [chem_magnetite, chem_hematite, chemQuartz, chemCalcite, chemAlkalifeldspar, chemPlagioclase]
|
|
456
|
+
minerals_basalt = [chemPlagioclase, chem_enstatite, chem_ferrosilite, chem_biotite, chem_actinolite, chem_tremolite, chem_olivine]
|
|
457
|
+
#
|
|
458
|
+
# input = core --> createCore
|
|
459
|
+
lithologies = []
|
|
460
|
+
mineralogy = []
|
|
461
|
+
massMinerals = []
|
|
462
|
+
for i in range(2, len(self.input)):
|
|
463
|
+
massMinerals.append([self.input[i][0], self.input[i][2]])
|
|
464
|
+
if self.input[i][0] not in lithologies:
|
|
465
|
+
lithologies.append(self.input[i][0])
|
|
466
|
+
for i in range(0, len(massMinerals)):
|
|
467
|
+
if massMinerals[i][0] == "sandstone":
|
|
468
|
+
for j in range(0, len(mineralsSandstone)):
|
|
469
|
+
massMinerals[i].extend([[self.input[i+2][4][j][0], self.input[i+2][4][j][1]*self.input[i+2][2]]])
|
|
470
|
+
if self.input[i+2][4][j][0] not in mineralogy:
|
|
471
|
+
mineralogy.append(self.input[i+2][4][j][0])
|
|
472
|
+
elif massMinerals[i][0] == "shale":
|
|
473
|
+
for j in range(0, len(mineralsShale)):
|
|
474
|
+
massMinerals[i].extend([[self.input[i+2][4][j][0], self.input[i+2][4][j][1]*self.input[i+2][2]]])
|
|
475
|
+
if self.input[i+2][4][j][0] not in mineralogy:
|
|
476
|
+
mineralogy.append(self.input[i+2][4][j][0])
|
|
477
|
+
elif massMinerals[i][0] == "limestone":
|
|
478
|
+
for j in range(0, len(mineralsLimestone)):
|
|
479
|
+
massMinerals[i].extend([[self.input[i+2][4][j][0], self.input[i+2][4][j][1]*self.input[i+2][2]]])
|
|
480
|
+
if self.input[i+2][4][j][0] not in mineralogy:
|
|
481
|
+
mineralogy.append(self.input[i+2][4][j][0])
|
|
482
|
+
elif massMinerals[i][0] == "dolomite":
|
|
483
|
+
for j in range(0, len(mineralsDolomite)):
|
|
484
|
+
massMinerals[i].extend([[self.input[i+2][4][j][0], self.input[i+2][4][j][1]*self.input[i+2][2]]])
|
|
485
|
+
if self.input[i+2][4][j][0] not in mineralogy:
|
|
486
|
+
mineralogy.append(self.input[i+2][4][j][0])
|
|
487
|
+
elif massMinerals[i][0] == "granite":
|
|
488
|
+
for j in range(0, len(mineralsGranite)):
|
|
489
|
+
massMinerals[i].extend([[self.input[i+2][4][j][0], self.input[i+2][4][j][1]*self.input[i+2][2]]])
|
|
490
|
+
if self.input[i+2][4][j][0] not in mineralogy:
|
|
491
|
+
mineralogy.append(self.input[i+2][4][j][0])
|
|
492
|
+
elif massMinerals[i][0] == "halite":
|
|
493
|
+
for j in range(0, len(mineralsHalite)):
|
|
494
|
+
massMinerals[i].extend([[self.input[i+2][4][j][0], self.input[i+2][4][j][1]*self.input[i+2][2]]])
|
|
495
|
+
if self.input[i+2][4][j][0] not in mineralogy:
|
|
496
|
+
mineralogy.append(self.input[i+2][4][j][0])
|
|
497
|
+
elif massMinerals[i][0] == "anhydrite":
|
|
498
|
+
for j in range(0, len(mineralsAnhydrite)):
|
|
499
|
+
massMinerals[i].extend([[self.input[i+2][4][j][0], self.input[i+2][4][j][1]*self.input[i+2][2]]])
|
|
500
|
+
if self.input[i+2][4][j][0] not in mineralogy:
|
|
501
|
+
mineralogy.append(self.input[i+2][4][j][0])
|
|
502
|
+
elif massMinerals[i][0] == "ore":
|
|
503
|
+
for j in range(0, len(minerals_ore_Fe)):
|
|
504
|
+
massMinerals[i].extend([[self.input[i+2][4][j][0], self.input[i+2][4][j][1]*self.input[i+2][2]]])
|
|
505
|
+
if self.input[i+2][4][j][0] not in mineralogy:
|
|
506
|
+
mineralogy.append(self.input[i+2][4][j][0])
|
|
507
|
+
elif massMinerals[i][0] == "basalt":
|
|
508
|
+
for j in range(0, len(minerals_basalt)):
|
|
509
|
+
massMinerals[i].extend([[self.input[i+2][4][j][0], self.input[i+2][4][j][1]*self.input[i+2][2]]])
|
|
510
|
+
if self.input[i+2][4][j][0] not in mineralogy:
|
|
511
|
+
mineralogy.append(self.input[i+2][4][j][0])
|
|
512
|
+
#for i in range(0, len(massMinerals)):
|
|
513
|
+
# if massMinerals[i][0] == "sandstone":
|
|
514
|
+
# print(massMinerals[i])
|
|
515
|
+
lithologies = sorted(lithologies, key=str.lower)
|
|
516
|
+
#print(lithologies)
|
|
517
|
+
mineralogy = sorted(mineralogy, key=str.lower)
|
|
518
|
+
#print(mineralogy)
|
|
519
|
+
#
|
|
520
|
+
n = []
|
|
521
|
+
for i in range(0, len(massMinerals)):
|
|
522
|
+
n.append([massMinerals[i][0]])
|
|
523
|
+
for i in range(0, len(n)):
|
|
524
|
+
if n[i][0] == "sandstone":
|
|
525
|
+
for j in range(0, len(mineralsSandstone)):
|
|
526
|
+
if mineralsSandstone[j][0] in ["Cal", "Dol", "Qz", "Or", "Hl", "Kln", "Bt", "Glt", "Chl", "Ilt", "Sd", "Mgs", "Anh", "Gp", "Hl", "Tr", "Gn", "Py", "Ccp", "Mol", "Syl"]:
|
|
527
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsSandstone[j][1])]])
|
|
528
|
+
elif mineralsSandstone[j][0] in ["Kfs", "Afs", "Pl", "Act"]:
|
|
529
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsSandstone[j][1][0]), mineralsSandstone[j][1][1]]])
|
|
530
|
+
else:
|
|
531
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsSandstone[j][0])]])
|
|
532
|
+
elif n[i][0] == "shale":
|
|
533
|
+
for j in range(0, len(mineralsShale)):
|
|
534
|
+
if mineralsShale[j][0] in ["Cal", "Dol", "Qz", "Or", "Hl", "Kln", "Bt", "Glt", "Chl", "Ilt", "Sd", "Mgs", "Anh", "Gp", "Hl", "Tr", "Gn", "Py", "Ccp", "Mol", "Syl"]:
|
|
535
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsShale[j][1])]])
|
|
536
|
+
elif mineralsShale[j][0] in ["Kfs", "Afs", "Pl", "Act"]:
|
|
537
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsShale[j][1][0]), mineralsShale[j][1][1]]])
|
|
538
|
+
else:
|
|
539
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsShale[j][0])]])
|
|
540
|
+
elif n[i][0] == "limestone":
|
|
541
|
+
for j in range(0, len(mineralsLimestone)):
|
|
542
|
+
if mineralsLimestone[j][0] in ["Cal", "Dol", "Qz", "Or", "Hl", "Kln", "Bt", "Glt", "Chl", "Ilt", "Sd", "Mgs", "Anh", "Gp", "Hl", "Tr", "Gn", "Py", "Ccp", "Mol", "Syl"]:
|
|
543
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsLimestone[j][1])]])
|
|
544
|
+
elif mineralsLimestone[j][0] in ["Kfs", "Afs", "Pl", "Act"]:
|
|
545
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsLimestone[j][1][0]), mineralsLimestone[j][1][1]]])
|
|
546
|
+
else:
|
|
547
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsLimestone[j][0])]])
|
|
548
|
+
elif n[i][0] == "dolomite":
|
|
549
|
+
for j in range(0, len(mineralsDolomite)):
|
|
550
|
+
if mineralsDolomite[j][0] in ["Cal", "Dol", "Qz", "Or", "Hl", "Kln", "Bt", "Glt", "Chl", "Ilt", "Sd", "Mgs", "Anh", "Gp", "Hl", "Tr", "Gn", "Py", "Ccp", "Mol", "Syl"]:
|
|
551
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsDolomite[j][1])]])
|
|
552
|
+
elif mineralsDolomite[j][0] in ["Kfs", "Afs", "Pl", "Act"]:
|
|
553
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsDolomite[j][1][0]), mineralsDolomite[j][1][1]]])
|
|
554
|
+
else:
|
|
555
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsDolomite[j][0])]])
|
|
556
|
+
elif n[i][0] == "granite":
|
|
557
|
+
for j in range(0, len(mineralsGranite)):
|
|
558
|
+
if mineralsGranite[j][0] in ["Qz", "Ms", "Tr"]:
|
|
559
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsGranite[j][1])]])
|
|
560
|
+
elif mineralsGranite[j][0] in ["Kfs", "Afs", "Pl", "Act"]:
|
|
561
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsGranite[j][1][0]), mineralsGranite[j][1][1]]])
|
|
562
|
+
else:
|
|
563
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsGranite[j][0])]])
|
|
564
|
+
elif n[i][0] == "halite":
|
|
565
|
+
for j in range(0, len(mineralsHalite)):
|
|
566
|
+
if mineralsHalite[j][0] in ["Cal", "Dol", "Qz", "Or", "Hl", "Kln", "Bt", "Glt", "Chl", "Ilt", "Sd", "Mgs", "Anh", "Gp", "Hl", "Tr", "Gn", "Py", "Ccp", "Mol", "Syl"]:
|
|
567
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsHalite[j][1])]])
|
|
568
|
+
elif mineralsHalite[j][0] in ["Kfs", "Afs", "Pl", "Act"]:
|
|
569
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsHalite[j][1][0]), mineralsHalite[j][1][1]]])
|
|
570
|
+
else:
|
|
571
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsHalite[j][0])]])
|
|
572
|
+
elif n[i][0] == "anhydrite":
|
|
573
|
+
for j in range(0, len(mineralsAnhydrite)):
|
|
574
|
+
if mineralsAnhydrite[j][0] in ["Cal", "Dol", "Qz", "Or", "Hl", "Kln", "Bt", "Glt", "Chl", "Ilt", "Sd", "Mgs", "Anh", "Gp", "Hl", "Tr", "Gn", "Py", "Ccp", "Mol", "Syl"]:
|
|
575
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsAnhydrite[j][1])]])
|
|
576
|
+
elif mineralsAnhydrite[j][0] in ["Kfs", "Afs", "Pl", "Act"]:
|
|
577
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsAnhydrite[j][1][0]), mineralsAnhydrite[j][1][1]]])
|
|
578
|
+
else:
|
|
579
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*mineralsAnhydrite[j][0])]])
|
|
580
|
+
elif n[i][0] == "ore":
|
|
581
|
+
for j in range(0, len(minerals_ore_Fe)):
|
|
582
|
+
if minerals_ore_Fe[j][0] in ["Mag", "Hem", "Qz", "Cal"]:
|
|
583
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*minerals_ore_Fe[j][1])]])
|
|
584
|
+
elif minerals_ore_Fe[j][0] in ["Kfs", "Afs", "Pl"]:
|
|
585
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*minerals_ore_Fe[j][1][0]), minerals_ore_Fe[j][1][1]]])
|
|
586
|
+
else:
|
|
587
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*minerals_ore_Fe[j][0])]])
|
|
588
|
+
elif n[i][0] == "basalt":
|
|
589
|
+
for j in range(0, len(minerals_basalt)):
|
|
590
|
+
if minerals_basalt[j][0] in ["En", "Fs", "Tr"]:
|
|
591
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*minerals_basalt[j][1])]])
|
|
592
|
+
elif minerals_basalt[j][0] in ["Kfs", "Afs", "Pl", "Act"]:
|
|
593
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*minerals_basalt[j][1][0]), minerals_basalt[j][1][1]]])
|
|
594
|
+
elif minerals_basalt[j][0] in ["Bt", "Ol"]:
|
|
595
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*minerals_basalt[j][1][0]), minerals_basalt[j][1][1], minerals_basalt[j][1][2], minerals_basalt[j][1][3]]])
|
|
596
|
+
else:
|
|
597
|
+
n[i].extend([[massMinerals[i][j+2][0], massMinerals[i][j+2][1]/(0.001*minerals_basalt[j][0])]])
|
|
598
|
+
#
|
|
599
|
+
data = elementanalysis(n, massMinerals)
|
|
600
|
+
if "Qz" in mineralogy:
|
|
601
|
+
dataQz = data.analyzeQuartz()
|
|
602
|
+
if "Cal" in mineralogy:
|
|
603
|
+
dataCal = data.analyzeCalcite()
|
|
604
|
+
if "Dol" in mineralogy:
|
|
605
|
+
dataDol = data.analyzeDolomite()
|
|
606
|
+
if "Bt" in mineralogy:
|
|
607
|
+
data_Bt = data.analyze_biotite(self.sequences)
|
|
608
|
+
if "Ilt" in mineralogy:
|
|
609
|
+
dataIlt = data.analyzeIllite()
|
|
610
|
+
if "Chl" in mineralogy:
|
|
611
|
+
dataChl = data.analyzeChlorite()
|
|
612
|
+
if "Glt" in mineralogy:
|
|
613
|
+
dataGlt = data.analyzeGlauconite()
|
|
614
|
+
if "Ms" in mineralogy:
|
|
615
|
+
dataMs = data.analyzeMuscovite()
|
|
616
|
+
if "Py" in mineralogy:
|
|
617
|
+
dataPy = data.analyzePyrite()
|
|
618
|
+
if "Hl" in mineralogy:
|
|
619
|
+
dataHl = data.analyzeHalite()
|
|
620
|
+
if "Anh" in mineralogy:
|
|
621
|
+
dataAnh = data.analyzeAnhydrite()
|
|
622
|
+
if "Gp" in mineralogy:
|
|
623
|
+
dataGp = data.analyzeGypsum()
|
|
624
|
+
if "Syl" in mineralogy:
|
|
625
|
+
dataSyl = data.analyzeSylvite()
|
|
626
|
+
if "Gn" in mineralogy:
|
|
627
|
+
dataGn = data.analyzeGalena()
|
|
628
|
+
if "Ccp" in mineralogy:
|
|
629
|
+
dataCcp = data.analyzeChalcopyrite()
|
|
630
|
+
if "Mol" in mineralogy:
|
|
631
|
+
dataMol = data.analyzeMolybdenite()
|
|
632
|
+
if "Kln" in mineralogy:
|
|
633
|
+
dataKln = data.analyzeKaolinite()
|
|
634
|
+
if "Afs" in mineralogy or "Kfs" in mineralogy:
|
|
635
|
+
dataKfs = data.analyzeAlkalifeldspar(self.sequences)
|
|
636
|
+
if "Pl" in mineralogy:
|
|
637
|
+
dataPl = data.analyzePlagioclase(self.sequences)
|
|
638
|
+
if "Sd" in mineralogy:
|
|
639
|
+
dataSd = data.analyzeSiderite()
|
|
640
|
+
if "Mgs" in mineralogy:
|
|
641
|
+
dataMgs = data.analyzeMagnesite()
|
|
642
|
+
if "Act" in mineralogy:
|
|
643
|
+
dataAct = data.analyzeActinolite(self.sequences)
|
|
644
|
+
if "Tr" in mineralogy:
|
|
645
|
+
dataTr = data.analyzeTremolite()
|
|
646
|
+
if "Mag" in mineralogy:
|
|
647
|
+
data_Mag = data.analyzeMagnetite()
|
|
648
|
+
if "Hem" in mineralogy:
|
|
649
|
+
data_Hem = data.analyzeHematite()
|
|
650
|
+
if "En" in mineralogy:
|
|
651
|
+
data_En = data.analyze_enstatite()
|
|
652
|
+
if "Fs" in mineralogy:
|
|
653
|
+
data_Fs = data.analyze_ferrosilite()
|
|
654
|
+
if "Ol" in mineralogy:
|
|
655
|
+
data_Ol = data.analyze_olivine(self.sequences)
|
|
656
|
+
#
|
|
657
|
+
sandstone = []
|
|
658
|
+
limestone = []
|
|
659
|
+
dolomite = []
|
|
660
|
+
shale = []
|
|
661
|
+
granite = []
|
|
662
|
+
halite = []
|
|
663
|
+
anhydrite = []
|
|
664
|
+
ore_Fe = []
|
|
665
|
+
basalt = []
|
|
666
|
+
for i in range(0, len(n)):
|
|
667
|
+
if n[i][0] == "sandstone":
|
|
668
|
+
sandstone.append([])
|
|
669
|
+
elif n[i][0] == "shale":
|
|
670
|
+
shale.append([])
|
|
671
|
+
elif n[i][0] == "limestone":
|
|
672
|
+
limestone.append([])
|
|
673
|
+
elif n[i][0] == "dolomite":
|
|
674
|
+
dolomite.append([])
|
|
675
|
+
elif n[i][0] == "granite":
|
|
676
|
+
granite.append([])
|
|
677
|
+
elif n[i][0] == "halite":
|
|
678
|
+
halite.append([])
|
|
679
|
+
elif n[i][0] == "anhydrite":
|
|
680
|
+
anhydrite.append([])
|
|
681
|
+
elif n[i][0] == "ore":
|
|
682
|
+
ore_Fe.append([])
|
|
683
|
+
elif n[i][0] == "basalt":
|
|
684
|
+
basalt.append([])
|
|
685
|
+
#
|
|
686
|
+
results = []
|
|
687
|
+
#
|
|
688
|
+
if "sandstone" in lithologies:
|
|
689
|
+
## SANDSTONE
|
|
690
|
+
#
|
|
691
|
+
QzSandstone = []
|
|
692
|
+
CalSandstone = []
|
|
693
|
+
DolSandstone = []
|
|
694
|
+
KfsSandstone = []
|
|
695
|
+
PlSandstone = []
|
|
696
|
+
BtSandstone = []
|
|
697
|
+
GltSandstone = []
|
|
698
|
+
for i in range(0, len(dataQz)):
|
|
699
|
+
if dataQz[i][0] == "sandstone":
|
|
700
|
+
QzSandstone.append(dataQz[i][1])
|
|
701
|
+
for i in range(0, len(dataCal)):
|
|
702
|
+
if dataCal[i][0] == "sandstone":
|
|
703
|
+
CalSandstone.append(dataCal[i][1])
|
|
704
|
+
for i in range(0, len(dataDol)):
|
|
705
|
+
if dataDol[i][0] == "sandstone":
|
|
706
|
+
DolSandstone.append(dataDol[i][1])
|
|
707
|
+
for i in range(0, len(dataKfs)):
|
|
708
|
+
if dataKfs[i][0] == "sandstone":
|
|
709
|
+
KfsSandstone.append(dataKfs[i][1])
|
|
710
|
+
for i in range(0, len(dataPl)):
|
|
711
|
+
if dataPl[i][0] == "sandstone":
|
|
712
|
+
PlSandstone.append(dataPl[i][1])
|
|
713
|
+
for i in range(0, len(data_Bt)):
|
|
714
|
+
if data_Bt[i][0] == "sandstone":
|
|
715
|
+
BtSandstone.append(data_Bt[i][1])
|
|
716
|
+
for i in range(0, len(dataGlt)):
|
|
717
|
+
if dataGlt[i][0] == "sandstone":
|
|
718
|
+
GltSandstone.append(dataGlt[i][1])
|
|
719
|
+
for i in range(0, len(sandstone)):
|
|
720
|
+
sandstone[i].extend(QzSandstone[i])
|
|
721
|
+
sandstone[i].extend(CalSandstone[i])
|
|
722
|
+
sandstone[i].extend(DolSandstone[i])
|
|
723
|
+
sandstone[i].extend(KfsSandstone[i])
|
|
724
|
+
sandstone[i].extend(PlSandstone[i])
|
|
725
|
+
sandstone[i].extend(BtSandstone[i])
|
|
726
|
+
sandstone[i].extend(GltSandstone[i])
|
|
727
|
+
elementsSandstone = []
|
|
728
|
+
for i in range(0, len(sandstone)):
|
|
729
|
+
elementsSandstone.append([])
|
|
730
|
+
for i in range(0, len(sandstone)):
|
|
731
|
+
for j in range(0, len(sandstone[i])):
|
|
732
|
+
if [sandstone[i][j][0],0] in elementsSandstone[i]:
|
|
733
|
+
pass
|
|
734
|
+
else:
|
|
735
|
+
elementsSandstone[i].append([sandstone[i][j][0], 0])
|
|
736
|
+
#print("Elements Sandstone:", elementsSandstone[0])
|
|
737
|
+
for i in range(0, len(sandstone)):
|
|
738
|
+
for j in range(0, len(sandstone[i])):
|
|
739
|
+
for k in range(0, len(elementsSandstone[i])):
|
|
740
|
+
if elementsSandstone[i][k][0] == sandstone[i][j][0]:
|
|
741
|
+
elementsSandstone[i][k][1] += sandstone[i][j][1]
|
|
742
|
+
else:
|
|
743
|
+
pass
|
|
744
|
+
mSandstone = []
|
|
745
|
+
for i in range(2, len(self.input)):
|
|
746
|
+
if self.input[i][0] == "sandstone":
|
|
747
|
+
mSandstone.append(round(self.input[i][2],3))
|
|
748
|
+
#print("m:", mSandstone)
|
|
749
|
+
dataM = []
|
|
750
|
+
for i in range(0, len(elementsSandstone)):
|
|
751
|
+
m = 0
|
|
752
|
+
for j in range(0, len(elementsSandstone[i])):
|
|
753
|
+
m += round(elementsSandstone[i][j][1], 3)
|
|
754
|
+
dataM.append(round(m, 3))
|
|
755
|
+
#print("dataM", dataM)
|
|
756
|
+
for i in range(0, len(elementsSandstone)):
|
|
757
|
+
for j in range(0, len(elementsSandstone[i])):
|
|
758
|
+
if elementsSandstone[i][j][0] == "H":
|
|
759
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/(0.001*chemH[2]))
|
|
760
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/dataM[i]*100)
|
|
761
|
+
elif elementsSandstone[i][j][0] == "C":
|
|
762
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/(0.001*chemC[2]))
|
|
763
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/dataM[i]*100)
|
|
764
|
+
elif elementsSandstone[i][j][0] == "O":
|
|
765
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/(0.001*chemO[2]))
|
|
766
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/dataM[i]*100)
|
|
767
|
+
elif elementsSandstone[i][j][0] == "F":
|
|
768
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/(0.001*chemF[2]))
|
|
769
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/dataM[i]*100)
|
|
770
|
+
elif elementsSandstone[i][j][0] == "Na":
|
|
771
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/(0.001*chemNa[2]))
|
|
772
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/dataM[i]*100)
|
|
773
|
+
elif elementsSandstone[i][j][0] == "Mg":
|
|
774
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/(0.001*chemMg[2]))
|
|
775
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/dataM[i]*100)
|
|
776
|
+
elif elementsSandstone[i][j][0] == "Al":
|
|
777
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/(0.001*chemAl[2]))
|
|
778
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/dataM[i]*100)
|
|
779
|
+
elif elementsSandstone[i][j][0] == "Si":
|
|
780
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/(0.001*chemSi[2]))
|
|
781
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/dataM[i]*100)
|
|
782
|
+
elif elementsSandstone[i][j][0] == "K":
|
|
783
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/(0.001*chemK[2]))
|
|
784
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/dataM[i]*100)
|
|
785
|
+
elif elementsSandstone[i][j][0] == "Ca":
|
|
786
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/(0.001*chemCa[2]))
|
|
787
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/dataM[i]*100)
|
|
788
|
+
elif elementsSandstone[i][j][0] == "Fe":
|
|
789
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/(0.001*chemFe[2]))
|
|
790
|
+
elementsSandstone[i][j].append(elementsSandstone[i][j][1]/dataM[i]*100)
|
|
791
|
+
resultsSandstone = []
|
|
792
|
+
for i in range(0, len(elementsSandstone)):
|
|
793
|
+
resultsSandstone.append(["sandstone", round(dataM[i],3)])
|
|
794
|
+
for i in range(0, len(elementsSandstone)):
|
|
795
|
+
for j in range(0, len(elementsSandstone[i])):
|
|
796
|
+
resultsSandstone[i].append([elementsSandstone[i][j][0], round(elementsSandstone[i][j][1],3), round(elementsSandstone[i][j][2],1), round(elementsSandstone[i][j][3],2)])
|
|
797
|
+
#
|
|
798
|
+
results.append(resultsSandstone)
|
|
799
|
+
#print("Results Sandstone:")
|
|
800
|
+
#for j in range(0, len(resultsSandstone)):
|
|
801
|
+
# print(j+1, ":", resultsSandstone[j])
|
|
802
|
+
#
|
|
803
|
+
# WRITING A CSV FILE
|
|
804
|
+
try:
|
|
805
|
+
Geochemistry_Sandstone = open("./outputs/Geochemistry_Sandstone.csv","w")
|
|
806
|
+
except:
|
|
807
|
+
print("Error")
|
|
808
|
+
sys.exit(0)
|
|
809
|
+
Geochemistry_Sandstone.write(str("rock")+","+str("sample mass")+","+str("H")+","+str("C")+","+str("O")+","+str("F")+","+str("Na")+","+str("Mg")+","+str("Al")+","+str("Si")+","+str("K")+","+str("Ca")+","+str("Fe")+"\n")
|
|
810
|
+
for i in range(0, len(resultsSandstone)):
|
|
811
|
+
Geochemistry_Sandstone.write(str(resultsSandstone[i][0])+","+str(resultsSandstone[i][1])+","+str(resultsSandstone[i][11][1]/resultsSandstone[i][1])+","+str(resultsSandstone[i][5][1]/resultsSandstone[i][1])+","+str(resultsSandstone[i][3][1]/resultsSandstone[i][1])+","+str(resultsSandstone[i][12][1]/resultsSandstone[i][1])+","+str(resultsSandstone[i][7][1]/resultsSandstone[i][1])+","+str(resultsSandstone[i][6][1]/resultsSandstone[i][1])+","+str(resultsSandstone[i][9][1]/resultsSandstone[i][1])+","+str(resultsSandstone[i][2][1]/resultsSandstone[i][1])+","+str(resultsSandstone[i][8][1]/resultsSandstone[i][1])+","+str(resultsSandstone[i][4][1]/resultsSandstone[i][1])+","+str(resultsSandstone[i][10][1]/resultsSandstone[i][1])+"\n")
|
|
812
|
+
#
|
|
813
|
+
if "limestone" in lithologies:
|
|
814
|
+
## LIMESTONE
|
|
815
|
+
#
|
|
816
|
+
CalLimestone = []
|
|
817
|
+
DolLimestone = []
|
|
818
|
+
QzLimestone = []
|
|
819
|
+
SdLimestone = []
|
|
820
|
+
KfsLimestone = []
|
|
821
|
+
PlLimestone = []
|
|
822
|
+
KlnLimestone = []
|
|
823
|
+
ChlLimestone = []
|
|
824
|
+
IltLimestone = []
|
|
825
|
+
for i in range(0, len(dataQz)):
|
|
826
|
+
if dataQz[i][0] == "limestone":
|
|
827
|
+
QzLimestone.append(dataQz[i][1])
|
|
828
|
+
for i in range(0, len(dataCal)):
|
|
829
|
+
if dataCal[i][0] == "limestone":
|
|
830
|
+
CalLimestone.append(dataCal[i][1])
|
|
831
|
+
for i in range(0, len(dataDol)):
|
|
832
|
+
if dataDol[i][0] == "limestone":
|
|
833
|
+
DolLimestone.append(dataDol[i][1])
|
|
834
|
+
for i in range(0, len(dataSd)):
|
|
835
|
+
if dataSd[i][0] == "limestone":
|
|
836
|
+
SdLimestone.append(dataSd[i][1])
|
|
837
|
+
for i in range(0, len(dataKfs)):
|
|
838
|
+
if dataKfs[i][0] == "limestone":
|
|
839
|
+
KfsLimestone.append(dataKfs[i][1])
|
|
840
|
+
for i in range(0, len(dataPl)):
|
|
841
|
+
if dataPl[i][0] == "limestone":
|
|
842
|
+
PlLimestone.append(dataPl[i][1])
|
|
843
|
+
for i in range(0, len(dataKln)):
|
|
844
|
+
if dataKln[i][0] == "limestone":
|
|
845
|
+
KlnLimestone.append(dataKln[i][1])
|
|
846
|
+
for i in range(0, len(dataChl)):
|
|
847
|
+
if dataChl[i][0] == "limestone":
|
|
848
|
+
ChlLimestone.append(dataChl[i][1])
|
|
849
|
+
for i in range(0, len(dataIlt)):
|
|
850
|
+
if dataIlt[i][0] == "limestone":
|
|
851
|
+
IltLimestone.append(dataIlt[i][1])
|
|
852
|
+
for i in range(0, len(limestone)):
|
|
853
|
+
limestone[i].extend(CalLimestone[i])
|
|
854
|
+
limestone[i].extend(DolLimestone[i])
|
|
855
|
+
limestone[i].extend(QzLimestone[i])
|
|
856
|
+
limestone[i].extend(SdLimestone[i])
|
|
857
|
+
limestone[i].extend(KfsLimestone[i])
|
|
858
|
+
limestone[i].extend(PlLimestone[i])
|
|
859
|
+
limestone[i].extend(KlnLimestone[i])
|
|
860
|
+
limestone[i].extend(ChlLimestone[i])
|
|
861
|
+
limestone[i].extend(IltLimestone[i])
|
|
862
|
+
elementsLimestone = []
|
|
863
|
+
for i in range(0, len(limestone)):
|
|
864
|
+
elementsLimestone.append([])
|
|
865
|
+
for i in range(0, len(limestone)):
|
|
866
|
+
for j in range(0, len(limestone[i])):
|
|
867
|
+
if [limestone[i][j][0],0] in elementsLimestone[i]:
|
|
868
|
+
pass
|
|
869
|
+
else:
|
|
870
|
+
elementsLimestone[i].append([limestone[i][j][0], 0])
|
|
871
|
+
#print("Elements Limestone:", elementsLimestone[0])
|
|
872
|
+
for i in range(0, len(limestone)):
|
|
873
|
+
for j in range(0, len(limestone[i])):
|
|
874
|
+
for k in range(0, len(elementsLimestone[i])):
|
|
875
|
+
if elementsLimestone[i][k][0] == limestone[i][j][0]:
|
|
876
|
+
elementsLimestone[i][k][1] += limestone[i][j][1]
|
|
877
|
+
else:
|
|
878
|
+
pass
|
|
879
|
+
mLimestone = []
|
|
880
|
+
for i in range(2, len(self.input)):
|
|
881
|
+
if self.input[i][0] == "limestone":
|
|
882
|
+
mLimestone.append(round(self.input[i][2],3))
|
|
883
|
+
#print("m:", mLimestone)
|
|
884
|
+
dataM = []
|
|
885
|
+
for i in range(0, len(elementsLimestone)):
|
|
886
|
+
m = 0
|
|
887
|
+
for j in range(0, len(elementsLimestone[i])):
|
|
888
|
+
m += round(elementsLimestone[i][j][1], 3)
|
|
889
|
+
dataM.append(round(m, 3))
|
|
890
|
+
# print("dataM", dataM)
|
|
891
|
+
for i in range(0, len(elementsLimestone)):
|
|
892
|
+
for j in range(0, len(elementsLimestone[i])):
|
|
893
|
+
if elementsLimestone[i][j][0] == "Ca":
|
|
894
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/(0.001*chemCa[2]))
|
|
895
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/dataM[i]*100)
|
|
896
|
+
elif elementsLimestone[i][j][0] == "C":
|
|
897
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/(0.001*chemC[2]))
|
|
898
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/dataM[i]*100)
|
|
899
|
+
elif elementsLimestone[i][j][0] == "O":
|
|
900
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/(0.001*chemO[2]))
|
|
901
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/dataM[i]*100)
|
|
902
|
+
elif elementsLimestone[i][j][0] == "Mg":
|
|
903
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/(0.001*chemMg[2]))
|
|
904
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/dataM[i]*100)
|
|
905
|
+
elif elementsLimestone[i][j][0] == "Si":
|
|
906
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/(0.001*chemSi[2]))
|
|
907
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/dataM[i]*100)
|
|
908
|
+
elif elementsLimestone[i][j][0] == "K":
|
|
909
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/(0.001*chemK[2]))
|
|
910
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/dataM[i]*100)
|
|
911
|
+
elif elementsLimestone[i][j][0] == "Al":
|
|
912
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/(0.001*chemAl[2]))
|
|
913
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/dataM[i]*100)
|
|
914
|
+
elif elementsLimestone[i][j][0] == "Fe":
|
|
915
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/(0.001*chemFe[2]))
|
|
916
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/dataM[i]*100)
|
|
917
|
+
elif elementsLimestone[i][j][0] == "Na":
|
|
918
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/(0.001*chemNa[2]))
|
|
919
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/dataM[i]*100)
|
|
920
|
+
elif elementsLimestone[i][j][0] == "H":
|
|
921
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/(0.001*chemH[2]))
|
|
922
|
+
elementsLimestone[i][j].append(elementsLimestone[i][j][1]/dataM[i]*100)
|
|
923
|
+
resultsLimestone = []
|
|
924
|
+
for i in range(0, len(elementsLimestone)):
|
|
925
|
+
resultsLimestone.append(["limestone", round(dataM[i],3)])
|
|
926
|
+
for i in range(0, len(elementsLimestone)):
|
|
927
|
+
for j in range(0, len(elementsLimestone[i])):
|
|
928
|
+
resultsLimestone[i].append([elementsLimestone[i][j][0], round(elementsLimestone[i][j][1],3), round(elementsLimestone[i][j][2],1), round(elementsLimestone[i][j][3],2)])
|
|
929
|
+
#
|
|
930
|
+
results.append(resultsLimestone)
|
|
931
|
+
#print("Results Limestone:")
|
|
932
|
+
#for j in range(0, len(resultsLimestone)):
|
|
933
|
+
# print(j+1, ":", resultsLimestone[j])
|
|
934
|
+
#
|
|
935
|
+
# WRITING A CSV FILE
|
|
936
|
+
try:
|
|
937
|
+
Geochemistry_Limestone = open("./outputs/Geochemistry_Limestone.csv","w")
|
|
938
|
+
except:
|
|
939
|
+
print("Error")
|
|
940
|
+
sys.exit(0)
|
|
941
|
+
Geochemistry_Limestone.write(str("rock")+","+str("sample mass")+","+str("H")+","+str("C")+","+str("O")+","+str("Na")+","+str("Mg")+","+str("Al")+","+str("Si")+","+str("K")+","+str("Ca")+","+str("Fe")+"\n")
|
|
942
|
+
for i in range(0, len(resultsLimestone)):
|
|
943
|
+
Geochemistry_Limestone.write(str(resultsLimestone[i][0])+","+str(resultsLimestone[i][1])+","+str(resultsLimestone[i][11][1]/resultsLimestone[i][1])+","+str(resultsLimestone[i][3][1]/resultsLimestone[i][1])+","+str(resultsLimestone[i][4][1]/resultsLimestone[i][1])+","+str(resultsLimestone[i][8][1]/resultsLimestone[i][1])+","+str(resultsLimestone[i][5][1]/resultsLimestone[i][1])+","+str(resultsLimestone[i][10][1]/resultsLimestone[i][1])+","+str(resultsLimestone[i][6][1]/resultsLimestone[i][1])+","+str(resultsLimestone[i][9][1]/resultsLimestone[i][1])+","+str(resultsLimestone[i][2][1]/resultsLimestone[i][1])+","+str(resultsLimestone[i][7][1]/resultsLimestone[i][1])+"\n")
|
|
944
|
+
#
|
|
945
|
+
if "dolomite" in lithologies:
|
|
946
|
+
## DOLOMITE
|
|
947
|
+
#
|
|
948
|
+
CalDolomite = []
|
|
949
|
+
DolDolomite = []
|
|
950
|
+
QzDolomite = []
|
|
951
|
+
MgsDolomite = []
|
|
952
|
+
KfsDolomite = []
|
|
953
|
+
PlDolomite = []
|
|
954
|
+
KlnDolomite = []
|
|
955
|
+
ChlDolomite = []
|
|
956
|
+
IltDolomite = []
|
|
957
|
+
for i in range(0, len(dataQz)):
|
|
958
|
+
if dataQz[i][0] == "dolomite":
|
|
959
|
+
QzDolomite.append(dataQz[i][1])
|
|
960
|
+
for i in range(0, len(dataCal)):
|
|
961
|
+
if dataCal[i][0] == "dolomite":
|
|
962
|
+
CalDolomite.append(dataCal[i][1])
|
|
963
|
+
for i in range(0, len(dataDol)):
|
|
964
|
+
if dataDol[i][0] == "dolomite":
|
|
965
|
+
DolDolomite.append(dataDol[i][1])
|
|
966
|
+
for i in range(0, len(dataMgs)):
|
|
967
|
+
if dataMgs[i][0] == "dolomite":
|
|
968
|
+
MgsDolomite.append(dataMgs[i][1])
|
|
969
|
+
for i in range(0, len(dataKfs)):
|
|
970
|
+
if dataKfs[i][0] == "dolomite":
|
|
971
|
+
KfsDolomite.append(dataKfs[i][1])
|
|
972
|
+
for i in range(0, len(dataPl)):
|
|
973
|
+
if dataPl[i][0] == "dolomite":
|
|
974
|
+
PlDolomite.append(dataPl[i][1])
|
|
975
|
+
for i in range(0, len(dataKln)):
|
|
976
|
+
if dataKln[i][0] == "dolomite":
|
|
977
|
+
KlnDolomite.append(dataKln[i][1])
|
|
978
|
+
for i in range(0, len(dataChl)):
|
|
979
|
+
if dataChl[i][0] == "dolomite":
|
|
980
|
+
ChlDolomite.append(dataChl[i][1])
|
|
981
|
+
for i in range(0, len(dataIlt)):
|
|
982
|
+
if dataIlt[i][0] == "dolomite":
|
|
983
|
+
IltDolomite.append(dataIlt[i][1])
|
|
984
|
+
for i in range(0, len(dolomite)):
|
|
985
|
+
dolomite[i].extend(CalDolomite[i])
|
|
986
|
+
dolomite[i].extend(DolDolomite[i])
|
|
987
|
+
dolomite[i].extend(QzDolomite[i])
|
|
988
|
+
dolomite[i].extend(MgsDolomite[i])
|
|
989
|
+
dolomite[i].extend(KfsDolomite[i])
|
|
990
|
+
dolomite[i].extend(PlDolomite[i])
|
|
991
|
+
dolomite[i].extend(KlnDolomite[i])
|
|
992
|
+
dolomite[i].extend(ChlDolomite[i])
|
|
993
|
+
dolomite[i].extend(IltDolomite[i])
|
|
994
|
+
elementsDolomite = []
|
|
995
|
+
for i in range(0, len(dolomite)):
|
|
996
|
+
elementsDolomite.append([])
|
|
997
|
+
for i in range(0, len(dolomite)):
|
|
998
|
+
for j in range(0, len(dolomite[i])):
|
|
999
|
+
if [dolomite[i][j][0],0] in elementsDolomite[i]:
|
|
1000
|
+
pass
|
|
1001
|
+
else:
|
|
1002
|
+
elementsDolomite[i].append([dolomite[i][j][0], 0])
|
|
1003
|
+
#print("Elements Dolomite:", elementsDolomite[0])
|
|
1004
|
+
for i in range(0, len(dolomite)):
|
|
1005
|
+
for j in range(0, len(dolomite[i])):
|
|
1006
|
+
for k in range(0, len(elementsDolomite[i])):
|
|
1007
|
+
if elementsDolomite[i][k][0] == dolomite[i][j][0]:
|
|
1008
|
+
elementsDolomite[i][k][1] += dolomite[i][j][1]
|
|
1009
|
+
else:
|
|
1010
|
+
pass
|
|
1011
|
+
mDolomite = []
|
|
1012
|
+
for i in range(2, len(self.input)):
|
|
1013
|
+
if self.input[i][0] == "dolomite":
|
|
1014
|
+
mDolomite.append(round(self.input[i][2],3))
|
|
1015
|
+
#print("m:", mDolomite)
|
|
1016
|
+
dataM = []
|
|
1017
|
+
for i in range(0, len(elementsDolomite)):
|
|
1018
|
+
m = 0
|
|
1019
|
+
for j in range(0, len(elementsDolomite[i])):
|
|
1020
|
+
m += round(elementsDolomite[i][j][1], 3)
|
|
1021
|
+
dataM.append(round(m, 3))
|
|
1022
|
+
# print("dataM", dataM)
|
|
1023
|
+
for i in range(0, len(elementsDolomite)):
|
|
1024
|
+
for j in range(0, len(elementsDolomite[i])):
|
|
1025
|
+
if elementsDolomite[i][j][0] == "Ca":
|
|
1026
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/(0.001*chemCa[2]))
|
|
1027
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/dataM[i]*100)
|
|
1028
|
+
elif elementsDolomite[i][j][0] == "C":
|
|
1029
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/(0.001*chemC[2]))
|
|
1030
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/dataM[i]*100)
|
|
1031
|
+
elif elementsDolomite[i][j][0] == "O":
|
|
1032
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/(0.001*chemO[2]))
|
|
1033
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/dataM[i]*100)
|
|
1034
|
+
elif elementsDolomite[i][j][0] == "Mg":
|
|
1035
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/(0.001*chemMg[2]))
|
|
1036
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/dataM[i]*100)
|
|
1037
|
+
elif elementsDolomite[i][j][0] == "Si":
|
|
1038
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/(0.001*chemSi[2]))
|
|
1039
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/dataM[i]*100)
|
|
1040
|
+
elif elementsDolomite[i][j][0] == "K":
|
|
1041
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/(0.001*chemK[2]))
|
|
1042
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/dataM[i]*100)
|
|
1043
|
+
elif elementsDolomite[i][j][0] == "Al":
|
|
1044
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/(0.001*chemAl[2]))
|
|
1045
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/dataM[i]*100)
|
|
1046
|
+
elif elementsDolomite[i][j][0] == "Fe":
|
|
1047
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/(0.001*chemFe[2]))
|
|
1048
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/dataM[i]*100)
|
|
1049
|
+
elif elementsDolomite[i][j][0] == "Na":
|
|
1050
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/(0.001*chemNa[2]))
|
|
1051
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/dataM[i]*100)
|
|
1052
|
+
elif elementsDolomite[i][j][0] == "H":
|
|
1053
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/(0.001*chemH[2]))
|
|
1054
|
+
elementsDolomite[i][j].append(elementsDolomite[i][j][1]/dataM[i]*100)
|
|
1055
|
+
resultsDolomite = []
|
|
1056
|
+
for i in range(0, len(elementsDolomite)):
|
|
1057
|
+
resultsDolomite.append(["dolomite", round(dataM[i],3)])
|
|
1058
|
+
for i in range(0, len(elementsDolomite)):
|
|
1059
|
+
for j in range(0, len(elementsDolomite[i])):
|
|
1060
|
+
resultsDolomite[i].append([elementsDolomite[i][j][0], round(elementsDolomite[i][j][1],3), round(elementsDolomite[i][j][2],1), round(elementsDolomite[i][j][3],2)])
|
|
1061
|
+
#
|
|
1062
|
+
results.append(resultsDolomite)
|
|
1063
|
+
#print("Results Dolomite:")
|
|
1064
|
+
#for j in range(0, len(resultsDolomite)):
|
|
1065
|
+
# print(j+1, ":", resultsDolomite[j])
|
|
1066
|
+
#
|
|
1067
|
+
# WRITING A CSV FILE
|
|
1068
|
+
try:
|
|
1069
|
+
Geochemistry_Dolomite = open("./outputs/Geochemistry_Dolomite.csv","w")
|
|
1070
|
+
except:
|
|
1071
|
+
print("Error")
|
|
1072
|
+
sys.exit(0)
|
|
1073
|
+
Geochemistry_Dolomite.write(str("rock")+","+str("sample mass")+","+str("H")+","+str("C")+","+str("O")+","+str("Na")+","+str("Mg")+","+str("Al")+","+str("Si")+","+str("K")+","+str("Ca")+","+str("Fe")+"\n")
|
|
1074
|
+
for i in range(0, len(resultsDolomite)):
|
|
1075
|
+
Geochemistry_Dolomite.write(str(resultsDolomite[i][0])+","+str(resultsDolomite[i][1])+","+str(resultsDolomite[i][10][1]/resultsDolomite[i][1])+","+str(resultsDolomite[i][3][1]/resultsDolomite[i][1])+","+str(resultsDolomite[i][4][1]/resultsDolomite[i][1])+","+str(resultsDolomite[i][7][1]/resultsDolomite[i][1])+","+str(resultsDolomite[i][5][1]/resultsDolomite[i][1])+","+str(resultsDolomite[i][9][1]/resultsDolomite[i][1])+","+str(resultsDolomite[i][6][1]/resultsDolomite[i][1])+","+str(resultsDolomite[i][8][1]/resultsDolomite[i][1])+","+str(resultsDolomite[i][2][1]/resultsDolomite[i][1])+","+str(resultsDolomite[i][11][1]/resultsDolomite[i][1])+"\n")
|
|
1076
|
+
#
|
|
1077
|
+
if "shale" in lithologies:
|
|
1078
|
+
## SHALE
|
|
1079
|
+
#
|
|
1080
|
+
QzShale = []
|
|
1081
|
+
KlnShale = []
|
|
1082
|
+
ChlShale = []
|
|
1083
|
+
IltShale = []
|
|
1084
|
+
CalShale = []
|
|
1085
|
+
DolShale = []
|
|
1086
|
+
KfsShale = []
|
|
1087
|
+
PlShale = []
|
|
1088
|
+
for i in range(0, len(dataQz)):
|
|
1089
|
+
if dataQz[i][0] == "shale":
|
|
1090
|
+
QzShale.append(dataQz[i][1])
|
|
1091
|
+
for i in range(0, len(dataKln)):
|
|
1092
|
+
if dataKln[i][0] == "shale":
|
|
1093
|
+
KlnShale.append(dataKln[i][1])
|
|
1094
|
+
for i in range(0, len(dataChl)):
|
|
1095
|
+
if dataChl[i][0] == "shale":
|
|
1096
|
+
ChlShale.append(dataChl[i][1])
|
|
1097
|
+
for i in range(0, len(dataIlt)):
|
|
1098
|
+
if dataIlt[i][0] == "shale":
|
|
1099
|
+
IltShale.append(dataIlt[i][1])
|
|
1100
|
+
for i in range(0, len(dataCal)):
|
|
1101
|
+
if dataCal[i][0] == "shale":
|
|
1102
|
+
CalShale.append(dataCal[i][1])
|
|
1103
|
+
for i in range(0, len(dataDol)):
|
|
1104
|
+
if dataDol[i][0] == "shale":
|
|
1105
|
+
DolShale.append(dataDol[i][1])
|
|
1106
|
+
for i in range(0, len(dataKfs)):
|
|
1107
|
+
if dataKfs[i][0] == "shale":
|
|
1108
|
+
KfsShale.append(dataKfs[i][1])
|
|
1109
|
+
for i in range(0, len(dataPl)):
|
|
1110
|
+
if dataPl[i][0] == "shale":
|
|
1111
|
+
PlShale.append(dataPl[i][1])
|
|
1112
|
+
for i in range(0, len(shale)):
|
|
1113
|
+
shale[i].extend(QzShale[i])
|
|
1114
|
+
shale[i].extend(KlnShale[i])
|
|
1115
|
+
shale[i].extend(ChlShale[i])
|
|
1116
|
+
shale[i].extend(IltShale[i])
|
|
1117
|
+
shale[i].extend(CalShale[i])
|
|
1118
|
+
shale[i].extend(DolShale[i])
|
|
1119
|
+
shale[i].extend(KfsShale[i])
|
|
1120
|
+
shale[i].extend(PlShale[i])
|
|
1121
|
+
elementsShale = []
|
|
1122
|
+
for i in range(0, len(shale)):
|
|
1123
|
+
elementsShale.append([])
|
|
1124
|
+
for i in range(0, len(shale)):
|
|
1125
|
+
for j in range(0, len(shale[i])):
|
|
1126
|
+
if [shale[i][j][0],0] in elementsShale[i]:
|
|
1127
|
+
pass
|
|
1128
|
+
else:
|
|
1129
|
+
elementsShale[i].append([shale[i][j][0], 0])
|
|
1130
|
+
#print("Elements Shale:", elementsShale[0])
|
|
1131
|
+
for i in range(0, len(shale)):
|
|
1132
|
+
for j in range(0, len(shale[i])):
|
|
1133
|
+
for k in range(0, len(elementsShale[i])):
|
|
1134
|
+
if elementsShale[i][k][0] == shale[i][j][0]:
|
|
1135
|
+
elementsShale[i][k][1] += shale[i][j][1]
|
|
1136
|
+
else:
|
|
1137
|
+
pass
|
|
1138
|
+
mShale = []
|
|
1139
|
+
for i in range(2, len(self.input)):
|
|
1140
|
+
if self.input[i][0] == "shale":
|
|
1141
|
+
mShale.append(round(self.input[i][2],3))
|
|
1142
|
+
#print("m:", mShale)
|
|
1143
|
+
dataM = []
|
|
1144
|
+
for i in range(0, len(elementsShale)):
|
|
1145
|
+
m = 0
|
|
1146
|
+
for j in range(0, len(elementsShale[i])):
|
|
1147
|
+
m += round(elementsShale[i][j][1], 3)
|
|
1148
|
+
dataM.append(round(m, 3))
|
|
1149
|
+
# print("dataM", dataM)
|
|
1150
|
+
for i in range(0, len(elementsShale)):
|
|
1151
|
+
for j in range(0, len(elementsShale[i])):
|
|
1152
|
+
if elementsShale[i][j][0] == "Si":
|
|
1153
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/(0.001*chemSi[2]))
|
|
1154
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/dataM[i]*100)
|
|
1155
|
+
elif elementsShale[i][j][0] == "O":
|
|
1156
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/(0.001*chemO[2]))
|
|
1157
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/dataM[i]*100)
|
|
1158
|
+
elif elementsShale[i][j][0] == "K":
|
|
1159
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/(0.001*chemK[2]))
|
|
1160
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/dataM[i]*100)
|
|
1161
|
+
elif elementsShale[i][j][0] == "Mg":
|
|
1162
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/(0.001*chemMg[2]))
|
|
1163
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/dataM[i]*100)
|
|
1164
|
+
elif elementsShale[i][j][0] == "Fe":
|
|
1165
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/(0.001*chemFe[2]))
|
|
1166
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/dataM[i]*100)
|
|
1167
|
+
elif elementsShale[i][j][0] == "Al":
|
|
1168
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/(0.001*chemAl[2]))
|
|
1169
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/dataM[i]*100)
|
|
1170
|
+
elif elementsShale[i][j][0] == "H":
|
|
1171
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/(0.001*chemH[2]))
|
|
1172
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/dataM[i]*100)
|
|
1173
|
+
elif elementsShale[i][j][0] == "Ca":
|
|
1174
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/(0.001*chemCa[2]))
|
|
1175
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/dataM[i]*100)
|
|
1176
|
+
elif elementsShale[i][j][0] == "Na":
|
|
1177
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/(0.001*chemNa[2]))
|
|
1178
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/dataM[i]*100)
|
|
1179
|
+
elif elementsShale[i][j][0] == "C":
|
|
1180
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/(0.001*chemC[2]))
|
|
1181
|
+
elementsShale[i][j].append(elementsShale[i][j][1]/dataM[i]*100)
|
|
1182
|
+
resultsShale = []
|
|
1183
|
+
for i in range(0, len(elementsShale)):
|
|
1184
|
+
resultsShale.append(["shale", round(dataM[i],3)])
|
|
1185
|
+
for i in range(0, len(elementsShale)):
|
|
1186
|
+
for j in range(0, len(elementsShale[i])):
|
|
1187
|
+
resultsShale[i].append([elementsShale[i][j][0], round(elementsShale[i][j][1],3), round(elementsShale[i][j][2],1), round(elementsShale[i][j][3],2)])
|
|
1188
|
+
#
|
|
1189
|
+
results.append(resultsShale)
|
|
1190
|
+
#print("Results Shale:")
|
|
1191
|
+
#for j in range(0, len(resultsShale)):
|
|
1192
|
+
# print(j+1, ":", resultsShale[j])
|
|
1193
|
+
#
|
|
1194
|
+
# WRITING A CSV FILE
|
|
1195
|
+
try:
|
|
1196
|
+
Geochemistry_Shale = open("./outputs/Geochemistry_Shale.csv","w")
|
|
1197
|
+
except:
|
|
1198
|
+
print("Error")
|
|
1199
|
+
sys.exit(0)
|
|
1200
|
+
Geochemistry_Shale.write(str("rock")+","+str("sample mass")+","+str("H")+","+str("C")+","+str("O")+","+str("Na")+","+str("Mg")+","+str("Al")+","+str("Si")+","+str("K")+","+str("Ca")+","+str("Fe")+"\n")
|
|
1201
|
+
for i in range(0, len(resultsShale)):
|
|
1202
|
+
Geochemistry_Shale.write(str(resultsShale[i][0])+","+str(resultsShale[i][1])+","+str(resultsShale[i][5][1]/resultsShale[i][1])+","+str(resultsShale[i][10][1]/resultsShale[i][1]/resultsShale[i][1])+","+str(resultsShale[i][3][1]/resultsShale[i][1])+","+str(resultsShale[i][11][1]/resultsShale[i][1])+","+str(resultsShale[i][7][1]/resultsShale[i][1])+","+str(resultsShale[i][4][1]/resultsShale[i][1])+","+str(resultsShale[i][2][1]/resultsShale[i][1])+","+str(resultsShale[i][8][1]/resultsShale[i][1])+","+str(resultsShale[i][9][1]/resultsShale[i][1])+","+str(resultsShale[i][6][1]/resultsShale[i][1])+"\n")
|
|
1203
|
+
#
|
|
1204
|
+
if "granite" in lithologies:
|
|
1205
|
+
## GRANITE
|
|
1206
|
+
#
|
|
1207
|
+
QzGranite = []
|
|
1208
|
+
KfsGranite = []
|
|
1209
|
+
PlGranite = []
|
|
1210
|
+
BtGranite = []
|
|
1211
|
+
MsGranite = []
|
|
1212
|
+
ActGranite = []
|
|
1213
|
+
TrGranite = []
|
|
1214
|
+
|
|
1215
|
+
for i in range(0, len(dataQz)):
|
|
1216
|
+
if dataQz[i][0] == "granite":
|
|
1217
|
+
QzGranite.append(dataQz[i][1])
|
|
1218
|
+
for i in range(0, len(dataKfs)):
|
|
1219
|
+
if dataKfs[i][0] == "granite":
|
|
1220
|
+
KfsGranite.append(dataKfs[i][1])
|
|
1221
|
+
for i in range(0, len(dataPl)):
|
|
1222
|
+
if dataPl[i][0] == "granite":
|
|
1223
|
+
PlGranite.append(dataPl[i][1])
|
|
1224
|
+
for i in range(0, len(data_Bt)):
|
|
1225
|
+
if data_Bt[i][0] == "granite":
|
|
1226
|
+
BtGranite.append(data_Bt[i][1])
|
|
1227
|
+
for i in range(0, len(dataMs)):
|
|
1228
|
+
if dataMs[i][0] == "granite":
|
|
1229
|
+
MsGranite.append(dataMs[i][1])
|
|
1230
|
+
for i in range(0, len(dataAct)):
|
|
1231
|
+
if dataAct[i][0] == "granite":
|
|
1232
|
+
ActGranite.append(dataAct[i][1])
|
|
1233
|
+
for i in range(0, len(dataTr)):
|
|
1234
|
+
if dataTr[i][0] == "granite":
|
|
1235
|
+
TrGranite.append(dataTr[i][1])
|
|
1236
|
+
for i in range(0, len(granite)):
|
|
1237
|
+
granite[i].extend(QzGranite[i])
|
|
1238
|
+
granite[i].extend(KfsGranite[i])
|
|
1239
|
+
granite[i].extend(PlGranite[i])
|
|
1240
|
+
granite[i].extend(BtGranite[i])
|
|
1241
|
+
granite[i].extend(MsGranite[i])
|
|
1242
|
+
granite[i].extend(ActGranite[i])
|
|
1243
|
+
granite[i].extend(TrGranite[i])
|
|
1244
|
+
elementsGranite = []
|
|
1245
|
+
for i in range(0, len(granite)):
|
|
1246
|
+
elementsGranite.append([])
|
|
1247
|
+
for i in range(0, len(granite)):
|
|
1248
|
+
for j in range(0, len(granite[i])):
|
|
1249
|
+
if [granite[i][j][0],0] in elementsGranite[i]:
|
|
1250
|
+
pass
|
|
1251
|
+
else:
|
|
1252
|
+
elementsGranite[i].append([granite[i][j][0], 0])
|
|
1253
|
+
#print("Elements Granite:", elementsGranite[0])
|
|
1254
|
+
for i in range(0, len(granite)):
|
|
1255
|
+
for j in range(0, len(granite[i])):
|
|
1256
|
+
for k in range(0, len(elementsGranite[i])):
|
|
1257
|
+
if elementsGranite[i][k][0] == granite[i][j][0]:
|
|
1258
|
+
elementsGranite[i][k][1] += granite[i][j][1]
|
|
1259
|
+
else:
|
|
1260
|
+
pass
|
|
1261
|
+
mGranite = []
|
|
1262
|
+
for i in range(2, len(self.input)):
|
|
1263
|
+
if self.input[i][0] == "granite":
|
|
1264
|
+
mGranite.append(round(self.input[i][2],3))
|
|
1265
|
+
#print("m:", mGranite)
|
|
1266
|
+
dataM = []
|
|
1267
|
+
for i in range(0, len(elementsGranite)):
|
|
1268
|
+
m = 0
|
|
1269
|
+
for j in range(0, len(elementsGranite[i])):
|
|
1270
|
+
m += round(elementsGranite[i][j][1], 3)
|
|
1271
|
+
dataM.append(round(m, 3))
|
|
1272
|
+
# print("dataM", dataM)
|
|
1273
|
+
for i in range(0, len(elementsGranite)):
|
|
1274
|
+
for j in range(0, len(elementsGranite[i])):
|
|
1275
|
+
if elementsGranite[i][j][0] == "H":
|
|
1276
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/(0.001*chemH[2]))
|
|
1277
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/dataM[i]*100)
|
|
1278
|
+
elif elementsGranite[i][j][0] == "O":
|
|
1279
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/(0.001*chemO[2]))
|
|
1280
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/dataM[i]*100)
|
|
1281
|
+
elif elementsGranite[i][j][0] == "F":
|
|
1282
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/(0.001*chemF[2]))
|
|
1283
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/dataM[i]*100)
|
|
1284
|
+
elif elementsGranite[i][j][0] == "Na":
|
|
1285
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/(0.001*chemNa[2]))
|
|
1286
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/dataM[i]*100)
|
|
1287
|
+
elif elementsGranite[i][j][0] == "Mg":
|
|
1288
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/(0.001*chemMg[2]))
|
|
1289
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/dataM[i]*100)
|
|
1290
|
+
elif elementsGranite[i][j][0] == "Al":
|
|
1291
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/(0.001*chemAl[2]))
|
|
1292
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/dataM[i]*100)
|
|
1293
|
+
elif elementsGranite[i][j][0] == "Si":
|
|
1294
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/(0.001*chemSi[2]))
|
|
1295
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/dataM[i]*100)
|
|
1296
|
+
elif elementsGranite[i][j][0] == "K":
|
|
1297
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/(0.001*chemK[2]))
|
|
1298
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/dataM[i]*100)
|
|
1299
|
+
elif elementsGranite[i][j][0] == "Ca":
|
|
1300
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/(0.001*chemCa[2]))
|
|
1301
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/dataM[i]*100)
|
|
1302
|
+
elif elementsGranite[i][j][0] == "Fe":
|
|
1303
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/(0.001*chemFe[2]))
|
|
1304
|
+
elementsGranite[i][j].append(elementsGranite[i][j][1]/dataM[i]*100)
|
|
1305
|
+
resultsGranite = []
|
|
1306
|
+
for i in range(0, len(elementsGranite)):
|
|
1307
|
+
resultsGranite.append(["granite", round(mGranite[i],3)])
|
|
1308
|
+
for i in range(0, len(elementsGranite)):
|
|
1309
|
+
for j in range(0, len(elementsGranite[i])):
|
|
1310
|
+
resultsGranite[i].append([elementsGranite[i][j][0], round(elementsGranite[i][j][1],3), round(elementsGranite[i][j][2],1), round(elementsGranite[i][j][3],2)])
|
|
1311
|
+
#
|
|
1312
|
+
results.append(resultsGranite)
|
|
1313
|
+
#print("Results Granite:")
|
|
1314
|
+
#for j in range(0, len(resultsGranite)):
|
|
1315
|
+
# print(j+1, ":", resultsGranite[j])
|
|
1316
|
+
#
|
|
1317
|
+
# WRITING A CSV FILE
|
|
1318
|
+
try:
|
|
1319
|
+
Geochemistry_Granite = open("./outputs/Geochemistry_Granite.csv","w")
|
|
1320
|
+
except:
|
|
1321
|
+
print("Error")
|
|
1322
|
+
sys.exit(0)
|
|
1323
|
+
Geochemistry_Granite.write(str("rock")+","+str("sample mass")+","+str("H")+","+str("O")+","+str("F")+","+str("Mg")+","+str("Al")+","+str("Si")+","+str("S")+","+str("K")+","+str("Ca")+","+str("Fe")+"\n")
|
|
1324
|
+
for i in range(0, len(resultsGranite)):
|
|
1325
|
+
Geochemistry_Granite.write(str(resultsGranite[i][0])+","+str(resultsGranite[i][1])+","+str(resultsGranite[i][8][1]/resultsGranite[i][1])+","+str(resultsGranite[i][3][1]/resultsGranite[i][1])+","+str(resultsGranite[i][9][1]/resultsGranite[i][1])+","+str(resultsGranite[i][6][1]/resultsGranite[i][1])+","+str(resultsGranite[i][5][1]/resultsGranite[i][1])+","+str(resultsGranite[i][2][1]/resultsGranite[i][1])+","+str(resultsGranite[i][10][1]/resultsGranite[i][1])+","+str(resultsGranite[i][4][1]/resultsGranite[i][1])+","+str(resultsGranite[i][7][1]/resultsGranite[i][1])+"\n")
|
|
1326
|
+
#
|
|
1327
|
+
if "halite" in lithologies:
|
|
1328
|
+
## HALITE
|
|
1329
|
+
#
|
|
1330
|
+
HlHalite = [] # NaCl
|
|
1331
|
+
AnhHalite = [] # CaSO4
|
|
1332
|
+
GpHalite = [] # CaSO4*H2O
|
|
1333
|
+
SylHalite = [] # KCl
|
|
1334
|
+
IltHalite = [] # (K,H3,O)(Al,Mg,Fe)2(Si,Al)4O10[(OH)2,(H2O)]
|
|
1335
|
+
|
|
1336
|
+
for i in range(0, len(dataHl)):
|
|
1337
|
+
if dataHl[i][0] == "halite":
|
|
1338
|
+
HlHalite.append(dataHl[i][1])
|
|
1339
|
+
for i in range(0, len(dataAnh)):
|
|
1340
|
+
if dataAnh[i][0] == "halite":
|
|
1341
|
+
AnhHalite.append(dataAnh[i][1])
|
|
1342
|
+
for i in range(0, len(dataGp)):
|
|
1343
|
+
if dataGp[i][0] == "halite":
|
|
1344
|
+
GpHalite.append(dataGp[i][1])
|
|
1345
|
+
for i in range(0, len(dataSyl)):
|
|
1346
|
+
if dataSyl[i][0] == "halite":
|
|
1347
|
+
SylHalite.append(dataSyl[i][1])
|
|
1348
|
+
for i in range(0, len(dataIlt)):
|
|
1349
|
+
if dataIlt[i][0] == "halite":
|
|
1350
|
+
IltHalite.append(dataIlt[i][1])
|
|
1351
|
+
for i in range(0, len(halite)):
|
|
1352
|
+
halite[i].extend(HlHalite[i])
|
|
1353
|
+
halite[i].extend(AnhHalite[i])
|
|
1354
|
+
halite[i].extend(GpHalite[i])
|
|
1355
|
+
halite[i].extend(SylHalite[i])
|
|
1356
|
+
halite[i].extend(IltHalite[i])
|
|
1357
|
+
elementsHalite = []
|
|
1358
|
+
for i in range(0, len(halite)):
|
|
1359
|
+
elementsHalite.append([])
|
|
1360
|
+
for i in range(0, len(halite)):
|
|
1361
|
+
for j in range(0, len(halite[i])):
|
|
1362
|
+
if [halite[i][j][0],0] in elementsHalite[i]:
|
|
1363
|
+
pass
|
|
1364
|
+
else:
|
|
1365
|
+
elementsHalite[i].append([halite[i][j][0], 0])
|
|
1366
|
+
#print("Elements Halite:", elementsHalite[0])
|
|
1367
|
+
for i in range(0, len(halite)):
|
|
1368
|
+
for j in range(0, len(halite[i])):
|
|
1369
|
+
for k in range(0, len(elementsHalite[i])):
|
|
1370
|
+
if elementsHalite[i][k][0] == halite[i][j][0]:
|
|
1371
|
+
elementsHalite[i][k][1] += halite[i][j][1]
|
|
1372
|
+
else:
|
|
1373
|
+
pass
|
|
1374
|
+
mHalite = []
|
|
1375
|
+
for i in range(2, len(self.input)):
|
|
1376
|
+
if self.input[i][0] == "halite":
|
|
1377
|
+
mHalite.append(round(self.input[i][2],3))
|
|
1378
|
+
#print("m:", mHalite)
|
|
1379
|
+
dataM = []
|
|
1380
|
+
for i in range(0, len(elementsHalite)):
|
|
1381
|
+
m = 0
|
|
1382
|
+
for j in range(0, len(elementsHalite[i])):
|
|
1383
|
+
m += round(elementsHalite[i][j][1], 3)
|
|
1384
|
+
dataM.append(round(m, 3))
|
|
1385
|
+
# print("dataM", dataM)
|
|
1386
|
+
for i in range(0, len(elementsHalite)):
|
|
1387
|
+
for j in range(0, len(elementsHalite[i])):
|
|
1388
|
+
if elementsHalite[i][j][0] == "H":
|
|
1389
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/(0.001*chemH[2]))
|
|
1390
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/dataM[i]*100)
|
|
1391
|
+
elif elementsHalite[i][j][0] == "O":
|
|
1392
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/(0.001*chemO[2]))
|
|
1393
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/dataM[i]*100)
|
|
1394
|
+
elif elementsHalite[i][j][0] == "Na":
|
|
1395
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/(0.001*chemNa[2]))
|
|
1396
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/dataM[i]*100)
|
|
1397
|
+
elif elementsHalite[i][j][0] == "Mg":
|
|
1398
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/(0.001*chemMg[2]))
|
|
1399
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/dataM[i]*100)
|
|
1400
|
+
elif elementsHalite[i][j][0] == "Al":
|
|
1401
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/(0.001*chemAl[2]))
|
|
1402
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/dataM[i]*100)
|
|
1403
|
+
elif elementsHalite[i][j][0] == "Si":
|
|
1404
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/(0.001*chemSi[2]))
|
|
1405
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/dataM[i]*100)
|
|
1406
|
+
elif elementsHalite[i][j][0] == "S":
|
|
1407
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/(0.001*chemS[2]))
|
|
1408
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/dataM[i]*100)
|
|
1409
|
+
elif elementsHalite[i][j][0] == "Cl":
|
|
1410
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/(0.001*chemCl[2]))
|
|
1411
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/dataM[i]*100)
|
|
1412
|
+
elif elementsHalite[i][j][0] == "K":
|
|
1413
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/(0.001*chemK[2]))
|
|
1414
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/dataM[i]*100)
|
|
1415
|
+
elif elementsHalite[i][j][0] == "Ca":
|
|
1416
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/(0.001*chemCa[2]))
|
|
1417
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/dataM[i]*100)
|
|
1418
|
+
elif elementsHalite[i][j][0] == "Fe":
|
|
1419
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/(0.001*chemFe[2]))
|
|
1420
|
+
elementsHalite[i][j].append(elementsHalite[i][j][1]/dataM[i]*100)
|
|
1421
|
+
|
|
1422
|
+
resultsHalite = []
|
|
1423
|
+
for i in range(0, len(elementsHalite)):
|
|
1424
|
+
resultsHalite.append(["halite", round(dataM[i],3)])
|
|
1425
|
+
for i in range(0, len(elementsHalite)):
|
|
1426
|
+
for j in range(0, len(elementsHalite[i])):
|
|
1427
|
+
resultsHalite[i].append([elementsHalite[i][j][0], round(elementsHalite[i][j][1],3), round(elementsHalite[i][j][2],1), round(elementsHalite[i][j][3],2)])
|
|
1428
|
+
#
|
|
1429
|
+
results.append(resultsHalite)
|
|
1430
|
+
#print("Results Halite:")
|
|
1431
|
+
#for j in range(0, len(resultsHalite)):
|
|
1432
|
+
# print(j+1, ":", resultsHalite[j])
|
|
1433
|
+
#
|
|
1434
|
+
# WRITING A CSV FILE
|
|
1435
|
+
try:
|
|
1436
|
+
Geochemistry_Halite = open("./outputs/Geochemistry_Halite.csv","w")
|
|
1437
|
+
except:
|
|
1438
|
+
print("Error")
|
|
1439
|
+
sys.exit(0)
|
|
1440
|
+
Geochemistry_Halite.write(str("rock")+","+str("sample mass")+","+str("H")+","+str("O")+","+str("Na")+","+str("Mg")+","+str("Al")+","+str("Si")+","+str("S")+","+str("Cl")+","+str("K")+","+str("Ca")+","+str("Fe")+"\n")
|
|
1441
|
+
for i in range(0, len(resultsHalite)):
|
|
1442
|
+
Geochemistry_Halite.write(str(resultsHalite[i][0])+","+str(resultsHalite[i][1])+","+str(resultsHalite[i][8][1]/resultsHalite[i][1])+","+str(resultsHalite[i][3][1]/resultsHalite[i][1])+","+str(resultsHalite[i][9][1]/resultsHalite[i][1])+","+str(resultsHalite[i][6][1]/resultsHalite[i][1])+","+str(resultsHalite[i][5][1]/resultsHalite[i][1])+","+str(resultsHalite[i][2][1]/resultsHalite[i][1])+","+str(resultsHalite[i][10][1]/resultsHalite[i][1])+","+str(resultsHalite[i][4][1]/resultsHalite[i][1])+","+str(resultsHalite[i][7][1]/resultsHalite[i][1])+"\n")
|
|
1443
|
+
#
|
|
1444
|
+
if "anhydrite" in lithologies:
|
|
1445
|
+
## ANHYDRITE
|
|
1446
|
+
#
|
|
1447
|
+
AnhAnhydrite = [] # CaSO4
|
|
1448
|
+
HlAnhydrite = [] # NaCl
|
|
1449
|
+
CalAnhydrite = [] # CaCO3
|
|
1450
|
+
GnAnhydrite = [] # PbS
|
|
1451
|
+
CcpAnhydrite = [] # CuFeS2
|
|
1452
|
+
MolAnhydrite = [] # MoS2
|
|
1453
|
+
PyAnhydrite = [] # FeS2
|
|
1454
|
+
|
|
1455
|
+
for i in range(0, len(dataAnh)):
|
|
1456
|
+
if dataAnh[i][0] == "anhydrite":
|
|
1457
|
+
AnhAnhydrite.append(dataAnh[i][1])
|
|
1458
|
+
for i in range(0, len(dataHl)):
|
|
1459
|
+
if dataHl[i][0] == "anhydrite":
|
|
1460
|
+
HlAnhydrite.append(dataHl[i][1])
|
|
1461
|
+
for i in range(0, len(dataCal)):
|
|
1462
|
+
if dataCal[i][0] == "anhydrite":
|
|
1463
|
+
CalAnhydrite.append(dataCal[i][1])
|
|
1464
|
+
for i in range(0, len(dataGn)):
|
|
1465
|
+
if dataGn[i][0] == "anhydrite":
|
|
1466
|
+
GnAnhydrite.append(dataGn[i][1])
|
|
1467
|
+
for i in range(0, len(dataCcp)):
|
|
1468
|
+
if dataCcp[i][0] == "anhydrite":
|
|
1469
|
+
CcpAnhydrite.append(dataCcp[i][1])
|
|
1470
|
+
for i in range(0, len(dataMol)):
|
|
1471
|
+
if dataMol[i][0] == "anhydrite":
|
|
1472
|
+
MolAnhydrite.append(dataMol[i][1])
|
|
1473
|
+
for i in range(0, len(dataPy)):
|
|
1474
|
+
if dataPy[i][0] == "anhydrite":
|
|
1475
|
+
PyAnhydrite.append(dataPy[i][1])
|
|
1476
|
+
for i in range(0, len(anhydrite)):
|
|
1477
|
+
anhydrite[i].extend(AnhAnhydrite[i])
|
|
1478
|
+
anhydrite[i].extend(HlAnhydrite[i])
|
|
1479
|
+
anhydrite[i].extend(CalAnhydrite[i])
|
|
1480
|
+
anhydrite[i].extend(GnAnhydrite[i])
|
|
1481
|
+
anhydrite[i].extend(CcpAnhydrite[i])
|
|
1482
|
+
anhydrite[i].extend(MolAnhydrite[i])
|
|
1483
|
+
anhydrite[i].extend(PyAnhydrite[i])
|
|
1484
|
+
elementsAnhydrite = []
|
|
1485
|
+
for i in range(0, len(anhydrite)):
|
|
1486
|
+
elementsAnhydrite.append([])
|
|
1487
|
+
for i in range(0, len(anhydrite)):
|
|
1488
|
+
for j in range(0, len(anhydrite[i])):
|
|
1489
|
+
if [anhydrite[i][j][0], 0] in elementsAnhydrite[i]:
|
|
1490
|
+
pass
|
|
1491
|
+
else:
|
|
1492
|
+
elementsAnhydrite[i].append([anhydrite[i][j][0], 0])
|
|
1493
|
+
# print("Elements Anhydrite:", elementsAnhydrite[0])
|
|
1494
|
+
for i in range(0, len(anhydrite)):
|
|
1495
|
+
for j in range(0, len(anhydrite[i])):
|
|
1496
|
+
for k in range(0, len(elementsAnhydrite[i])):
|
|
1497
|
+
if elementsAnhydrite[i][k][0] == anhydrite[i][j][0]:
|
|
1498
|
+
elementsAnhydrite[i][k][1] += anhydrite[i][j][1]
|
|
1499
|
+
else:
|
|
1500
|
+
pass
|
|
1501
|
+
mAnhydrite = []
|
|
1502
|
+
for i in range(2, len(self.input)):
|
|
1503
|
+
if self.input[i][0] == "anhydrite":
|
|
1504
|
+
mAnhydrite.append(round(self.input[i][2], 3))
|
|
1505
|
+
# print("m:", mAnhydrite)
|
|
1506
|
+
dataM = []
|
|
1507
|
+
for i in range(0, len(elementsAnhydrite)):
|
|
1508
|
+
m = 0
|
|
1509
|
+
for j in range(0, len(elementsAnhydrite[i])):
|
|
1510
|
+
m += round(elementsAnhydrite[i][j][1], 3)
|
|
1511
|
+
dataM.append(round(m, 3))
|
|
1512
|
+
# print("dataM", dataM)
|
|
1513
|
+
for i in range(0, len(elementsAnhydrite)):
|
|
1514
|
+
for j in range(0, len(elementsAnhydrite[i])):
|
|
1515
|
+
if elementsAnhydrite[i][j][0] == "C":
|
|
1516
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / (0.001 * chemC[2]))
|
|
1517
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / dataM[i] * 100)
|
|
1518
|
+
elif elementsAnhydrite[i][j][0] == "O":
|
|
1519
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / (0.001 * chemO[2]))
|
|
1520
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / dataM[i] * 100)
|
|
1521
|
+
elif elementsAnhydrite[i][j][0] == "Na":
|
|
1522
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / (0.001 * chemNa[2]))
|
|
1523
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / dataM[i] * 100)
|
|
1524
|
+
elif elementsAnhydrite[i][j][0] == "S":
|
|
1525
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / (0.001 * chemS[2]))
|
|
1526
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / dataM[i] * 100)
|
|
1527
|
+
elif elementsAnhydrite[i][j][0] == "Cl":
|
|
1528
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / (0.001 * chemCl[2]))
|
|
1529
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / dataM[i] * 100)
|
|
1530
|
+
elif elementsAnhydrite[i][j][0] == "Ca":
|
|
1531
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / (0.001 * chemCa[2]))
|
|
1532
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / dataM[i] * 100)
|
|
1533
|
+
elif elementsAnhydrite[i][j][0] == "Fe":
|
|
1534
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / (0.001 * chemFe[2]))
|
|
1535
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / dataM[i] * 100)
|
|
1536
|
+
elif elementsAnhydrite[i][j][0] == "Cu":
|
|
1537
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / (0.001 * chemCu[2]))
|
|
1538
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / dataM[i] * 100)
|
|
1539
|
+
elif elementsAnhydrite[i][j][0] == "Mo":
|
|
1540
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / (0.001 * chemMo[2]))
|
|
1541
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / dataM [i] * 100)
|
|
1542
|
+
elif elementsAnhydrite[i][j][0] == "Pb":
|
|
1543
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / (0.001 * chemPb[2]))
|
|
1544
|
+
elementsAnhydrite[i][j].append(elementsAnhydrite[i][j][1] / dataM[i] * 100)
|
|
1545
|
+
|
|
1546
|
+
resultsAnhydrite = []
|
|
1547
|
+
for i in range(0, len(elementsAnhydrite)):
|
|
1548
|
+
resultsAnhydrite.append(["anhydrite", round(dataM[i], 3)])
|
|
1549
|
+
for i in range(0, len(elementsAnhydrite)):
|
|
1550
|
+
for j in range(0, len(elementsAnhydrite[i])):
|
|
1551
|
+
resultsAnhydrite[i].append([elementsAnhydrite[i][j][0], round(elementsAnhydrite[i][j][1], 3), round(elementsAnhydrite[i][j][2], 1), round(elementsAnhydrite[i][j][3], 2)])
|
|
1552
|
+
#
|
|
1553
|
+
results.append(resultsAnhydrite)
|
|
1554
|
+
#print("Results Anhydrite:")
|
|
1555
|
+
#for j in range(0, len(resultsAnhydrite)):
|
|
1556
|
+
# print(j + 1, ":", resultsAnhydrite[j])
|
|
1557
|
+
#
|
|
1558
|
+
# WRITING A CSV FILE
|
|
1559
|
+
try:
|
|
1560
|
+
Geochemistry_Anhydrite = open("./outputs/Geochemistry_Anhydrite.csv","w")
|
|
1561
|
+
except:
|
|
1562
|
+
print("Error")
|
|
1563
|
+
sys.exit(0)
|
|
1564
|
+
Geochemistry_Anhydrite.write(str("rock")+","+str("sample mass")+","+str("C")+","+str("O")+","+str("Na")+","+str("S")+","+str("Cl")+","+str("Ca")+","+str("Fe")+","+str("Cu")+","+str("Mo")+","+str("Pb")+"\n")
|
|
1565
|
+
for i in range(0, len(resultsAnhydrite)):
|
|
1566
|
+
Geochemistry_Anhydrite.write(str(resultsAnhydrite[i][0])+","+str(resultsAnhydrite[i][1])+","+str(resultsAnhydrite[i][7][1]/resultsAnhydrite[i][1])+","+str(resultsAnhydrite[i][4][1]/resultsAnhydrite[i][1])+","+str(resultsAnhydrite[i][5][1]/resultsAnhydrite[i][1])+","+str(resultsAnhydrite[i][3][1]/resultsAnhydrite[i][1])+","+str(resultsAnhydrite[i][6][1]/resultsAnhydrite[i][1])+","+str(resultsAnhydrite[i][2][1]/resultsAnhydrite[i][1])+","+str(resultsAnhydrite[i][10][1]/resultsAnhydrite[i][1])+","+str(resultsAnhydrite[i][9][1]/resultsAnhydrite[i][1])+","+str(resultsAnhydrite[i][11][1]/resultsAnhydrite[i][1])+","+str(resultsAnhydrite[i][8][1]/resultsAnhydrite[i][1])+"\n")
|
|
1567
|
+
#
|
|
1568
|
+
if "ore" in lithologies:
|
|
1569
|
+
## ORE (IRON)
|
|
1570
|
+
#
|
|
1571
|
+
Mag_ore_Fe = []
|
|
1572
|
+
Hem_ore_Fe = []
|
|
1573
|
+
Qz_ore_Fe = []
|
|
1574
|
+
Cal_ore_Fe = []
|
|
1575
|
+
Kfs_ore_Fe = []
|
|
1576
|
+
Pl_ore_Fe = []
|
|
1577
|
+
for i in range(0, len(data_Mag)):
|
|
1578
|
+
if data_Mag[i][0] == "ore":
|
|
1579
|
+
Mag_ore_Fe.append(data_Mag[i][1])
|
|
1580
|
+
for i in range(0, len(data_Hem)):
|
|
1581
|
+
if data_Hem[i][0] == "ore":
|
|
1582
|
+
Hem_ore_Fe.append(data_Hem[i][1])
|
|
1583
|
+
for i in range(0, len(dataQz)):
|
|
1584
|
+
if dataQz[i][0] == "ore":
|
|
1585
|
+
Qz_ore_Fe.append(dataQz[i][1])
|
|
1586
|
+
for i in range(0, len(dataCal)):
|
|
1587
|
+
if dataCal[i][0] == "ore":
|
|
1588
|
+
Cal_ore_Fe.append(dataCal[i][1])
|
|
1589
|
+
for i in range(0, len(dataKfs)):
|
|
1590
|
+
if dataKfs[i][0] == "ore":
|
|
1591
|
+
Kfs_ore_Fe.append(dataKfs[i][1])
|
|
1592
|
+
for i in range(0, len(dataPl)):
|
|
1593
|
+
if dataPl[i][0] == "ore":
|
|
1594
|
+
Pl_ore_Fe.append(dataPl[i][1])
|
|
1595
|
+
for i in range(0, len(ore_Fe)):
|
|
1596
|
+
ore_Fe[i].extend(Mag_ore_Fe[i])
|
|
1597
|
+
ore_Fe[i].extend(Hem_ore_Fe[i])
|
|
1598
|
+
ore_Fe[i].extend(Qz_ore_Fe[i])
|
|
1599
|
+
ore_Fe[i].extend(Cal_ore_Fe[i])
|
|
1600
|
+
ore_Fe[i].extend(Kfs_ore_Fe[i])
|
|
1601
|
+
ore_Fe[i].extend(Pl_ore_Fe[i])
|
|
1602
|
+
elements_ore_Fe = []
|
|
1603
|
+
for i in range(0, len(ore_Fe)):
|
|
1604
|
+
elements_ore_Fe.append([])
|
|
1605
|
+
for i in range(0, len(ore_Fe)):
|
|
1606
|
+
for j in range(0, len(ore_Fe[i])):
|
|
1607
|
+
if [ore_Fe[i][j][0],0] in elements_ore_Fe[i]:
|
|
1608
|
+
pass
|
|
1609
|
+
else:
|
|
1610
|
+
elements_ore_Fe[i].append([ore_Fe[i][j][0], 0])
|
|
1611
|
+
#print("Elements Ore (Fe):", elements_ore_Fe[0])
|
|
1612
|
+
for i in range(0, len(ore_Fe)):
|
|
1613
|
+
for j in range(0, len(ore_Fe[i])):
|
|
1614
|
+
for k in range(0, len(elements_ore_Fe[i])):
|
|
1615
|
+
if elements_ore_Fe[i][k][0] == ore_Fe[i][j][0]:
|
|
1616
|
+
elements_ore_Fe[i][k][1] += ore_Fe[i][j][1]
|
|
1617
|
+
else:
|
|
1618
|
+
pass
|
|
1619
|
+
m_ore_Fe = []
|
|
1620
|
+
for i in range(2, len(self.input)):
|
|
1621
|
+
if self.input[i][0] == "ore":
|
|
1622
|
+
m_ore_Fe.append(round(self.input[i][2],3))
|
|
1623
|
+
#print("m:", m_ore_Fe)
|
|
1624
|
+
dataM = []
|
|
1625
|
+
for i in range(0, len(elements_ore_Fe)):
|
|
1626
|
+
m = 0
|
|
1627
|
+
for j in range(0, len(elements_ore_Fe[i])):
|
|
1628
|
+
m += round(elements_ore_Fe[i][j][1], 3)
|
|
1629
|
+
dataM.append(round(m, 3))
|
|
1630
|
+
#print("dataM", dataM)
|
|
1631
|
+
for i in range(0, len(elements_ore_Fe)):
|
|
1632
|
+
for j in range(0, len(elements_ore_Fe[i])):
|
|
1633
|
+
if elements_ore_Fe[i][j][0] == "C":
|
|
1634
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/(0.001*chemC[2]))
|
|
1635
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/dataM[i]*100)
|
|
1636
|
+
elif elements_ore_Fe[i][j][0] == "O":
|
|
1637
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/(0.001*chemO[2]))
|
|
1638
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/dataM[i]*100)
|
|
1639
|
+
elif elements_ore_Fe[i][j][0] == "Na":
|
|
1640
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/(0.001*chemNa[2]))
|
|
1641
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/dataM[i]*100)
|
|
1642
|
+
elif elements_ore_Fe[i][j][0] == "Al":
|
|
1643
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/(0.001*chemAl[2]))
|
|
1644
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/dataM[i]*100)
|
|
1645
|
+
elif elements_ore_Fe[i][j][0] == "Si":
|
|
1646
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/(0.001*chemSi[2]))
|
|
1647
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/dataM[i]*100)
|
|
1648
|
+
elif elements_ore_Fe[i][j][0] == "K":
|
|
1649
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/(0.001*chemK[2]))
|
|
1650
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/dataM[i]*100)
|
|
1651
|
+
elif elements_ore_Fe[i][j][0] == "Ca":
|
|
1652
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/(0.001*chemCa[2]))
|
|
1653
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/dataM[i]*100)
|
|
1654
|
+
elif elements_ore_Fe[i][j][0] == "Fe":
|
|
1655
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/(0.001*chemFe[2]))
|
|
1656
|
+
elements_ore_Fe[i][j].append(elements_ore_Fe[i][j][1]/dataM[i]*100)
|
|
1657
|
+
results_ore_Fe = []
|
|
1658
|
+
for i in range(0, len(elements_ore_Fe)):
|
|
1659
|
+
results_ore_Fe.append(["ore", round(dataM[i],3)])
|
|
1660
|
+
for i in range(0, len(elements_ore_Fe)):
|
|
1661
|
+
for j in range(0, len(elements_ore_Fe[i])):
|
|
1662
|
+
results_ore_Fe[i].append([elements_ore_Fe[i][j][0], round(elements_ore_Fe[i][j][1],3), round(elements_ore_Fe[i][j][2],1), round(elements_ore_Fe[i][j][3],2)])
|
|
1663
|
+
#
|
|
1664
|
+
results.append(results_ore_Fe)
|
|
1665
|
+
#print("Results Ore (Fe):")
|
|
1666
|
+
#for j in range(0, len(results_ore_Fe)):
|
|
1667
|
+
# print(j+1, ":", results_ore_Fe[j])
|
|
1668
|
+
#
|
|
1669
|
+
# WRITING A CSV FILE
|
|
1670
|
+
try:
|
|
1671
|
+
Geochemistry_Ore_Fe = open("./outputs/Geochemistry_Ore_Fe.csv","w")
|
|
1672
|
+
except:
|
|
1673
|
+
print("Error")
|
|
1674
|
+
sys.exit(0)
|
|
1675
|
+
Geochemistry_Ore_Fe.write(str("rock")+","+str("sample mass")+","+str("C")+","+str("O")+","+str("Na")+","+str("Al")+","+str("Si")+","+str("K")+","+str("Ca")+","+str("Fe")+"\n")
|
|
1676
|
+
for i in range(0, len(results_ore_Fe)):
|
|
1677
|
+
Geochemistry_Ore_Fe.write(str(results_ore_Fe[i][0])+","+str(results_ore_Fe[i][1])+","+str(results_ore_Fe[i][6][1]/results_ore_Fe[i][1])+","+str(results_ore_Fe[i][3][1]/results_ore_Fe[i][1])+","+str(results_ore_Fe[i][7][1]/results_ore_Fe[i][1])+","+str(results_ore_Fe[i][9][1]/results_ore_Fe[i][1])+","+str(results_ore_Fe[i][4][1]/results_ore_Fe[i][1])+","+str(results_ore_Fe[i][8][1]/results_ore_Fe[i][1])+","+str(results_ore_Fe[i][5][1]/results_ore_Fe[i][1])+","+str(results_ore_Fe[i][2][1]/results_ore_Fe[i][1])+"\n")
|
|
1678
|
+
#
|
|
1679
|
+
if "basalt" in lithologies:
|
|
1680
|
+
## Basalt
|
|
1681
|
+
#
|
|
1682
|
+
basalt_Pl = []
|
|
1683
|
+
basalt_En = []
|
|
1684
|
+
basalt_Fs = []
|
|
1685
|
+
basalt_Bt = []
|
|
1686
|
+
basalt_Act = []
|
|
1687
|
+
basalt_Tr = []
|
|
1688
|
+
basalt_Ol = []
|
|
1689
|
+
for i in range(0, len(dataPl)):
|
|
1690
|
+
if dataPl[i][0] == "basalt":
|
|
1691
|
+
basalt_Pl.append(dataPl[i][1])
|
|
1692
|
+
for i in range(0, len(data_En)):
|
|
1693
|
+
if data_En[i][0] == "basalt":
|
|
1694
|
+
basalt_En.append(data_En[i][1])
|
|
1695
|
+
for i in range(0, len(data_Fs)):
|
|
1696
|
+
if data_Fs[i][0] == "basalt":
|
|
1697
|
+
basalt_Fs.append(data_Fs[i][1])
|
|
1698
|
+
for i in range(0, len(data_Bt)):
|
|
1699
|
+
if data_Bt[i][0] == "basalt":
|
|
1700
|
+
basalt_Bt.append(data_Bt[i][1])
|
|
1701
|
+
for i in range(0, len(dataAct)):
|
|
1702
|
+
if dataAct[i][0] == "basalt":
|
|
1703
|
+
basalt_Act.append(dataAct[i][1])
|
|
1704
|
+
for i in range(0, len(dataTr)):
|
|
1705
|
+
if dataTr[i][0] == "basalt":
|
|
1706
|
+
basalt_Tr.append(dataTr[i][1])
|
|
1707
|
+
for i in range(0, len(data_Ol)):
|
|
1708
|
+
if data_Ol[i][0] == "basalt":
|
|
1709
|
+
basalt_Ol.append(data_Ol[i][1])
|
|
1710
|
+
for i in range(0, len(basalt)):
|
|
1711
|
+
basalt[i].extend(basalt_Pl[i])
|
|
1712
|
+
basalt[i].extend(basalt_En[i])
|
|
1713
|
+
basalt[i].extend(basalt_Fs[i])
|
|
1714
|
+
basalt[i].extend(basalt_Bt[i])
|
|
1715
|
+
basalt[i].extend(basalt_Act[i])
|
|
1716
|
+
basalt[i].extend(basalt_Tr[i])
|
|
1717
|
+
basalt[i].extend(basalt_Ol[i])
|
|
1718
|
+
elements_basalt = []
|
|
1719
|
+
for i in range(0, len(basalt)):
|
|
1720
|
+
elements_basalt.append([])
|
|
1721
|
+
for i in range(0, len(basalt)):
|
|
1722
|
+
for j in range(0, len(basalt[i])):
|
|
1723
|
+
if [basalt[i][j][0],0] in elements_basalt[i]:
|
|
1724
|
+
pass
|
|
1725
|
+
else:
|
|
1726
|
+
elements_basalt[i].append([basalt[i][j][0], 0])
|
|
1727
|
+
#print("Elements Basalt:", elements_basalt[0])
|
|
1728
|
+
for i in range(0, len(basalt)):
|
|
1729
|
+
for j in range(0, len(basalt[i])):
|
|
1730
|
+
for k in range(0, len(elements_basalt[i])):
|
|
1731
|
+
if elements_basalt[i][k][0] == basalt[i][j][0]:
|
|
1732
|
+
elements_basalt[i][k][1] += basalt[i][j][1]
|
|
1733
|
+
else:
|
|
1734
|
+
pass
|
|
1735
|
+
m_basalt = []
|
|
1736
|
+
for i in range(2, len(self.input)):
|
|
1737
|
+
if self.input[i][0] == "basalt":
|
|
1738
|
+
m_basalt.append(round(self.input[i][2],3))
|
|
1739
|
+
#print("m:", m_basalt)
|
|
1740
|
+
dataM = []
|
|
1741
|
+
for i in range(0, len(elements_basalt)):
|
|
1742
|
+
m = 0
|
|
1743
|
+
for j in range(0, len(elements_basalt[i])):
|
|
1744
|
+
m += round(elements_basalt[i][j][1], 3)
|
|
1745
|
+
dataM.append(round(m, 3))
|
|
1746
|
+
#print("dataM", dataM)
|
|
1747
|
+
for i in range(0, len(elements_basalt)):
|
|
1748
|
+
for j in range(0, len(elements_basalt[i])):
|
|
1749
|
+
if elements_basalt[i][j][0] == "H":
|
|
1750
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/(0.001*chemH[2]))
|
|
1751
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/dataM[i]*100)
|
|
1752
|
+
elif elements_basalt[i][j][0] == "O":
|
|
1753
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/(0.001*chemO[2]))
|
|
1754
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/dataM[i]*100)
|
|
1755
|
+
elif elements_basalt[i][j][0] == "F":
|
|
1756
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/(0.001*chemF[2]))
|
|
1757
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/dataM[i]*100)
|
|
1758
|
+
elif elements_basalt[i][j][0] == "Na":
|
|
1759
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/(0.001*chemNa[2]))
|
|
1760
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/dataM[i]*100)
|
|
1761
|
+
elif elements_basalt[i][j][0] == "Mg":
|
|
1762
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/(0.001*chemMg[2]))
|
|
1763
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/dataM[i]*100)
|
|
1764
|
+
elif elements_basalt[i][j][0] == "Al":
|
|
1765
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/(0.001*chemAl[2]))
|
|
1766
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/dataM[i]*100)
|
|
1767
|
+
elif elements_basalt[i][j][0] == "Si":
|
|
1768
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/(0.001*chemSi[2]))
|
|
1769
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/dataM[i]*100)
|
|
1770
|
+
elif elements_basalt[i][j][0] == "K":
|
|
1771
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/(0.001*chemK[2]))
|
|
1772
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/dataM[i]*100)
|
|
1773
|
+
elif elements_basalt[i][j][0] == "Ca":
|
|
1774
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/(0.001*chemCa[2]))
|
|
1775
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/dataM[i]*100)
|
|
1776
|
+
elif elements_basalt[i][j][0] == "Mn":
|
|
1777
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/(0.001*chemMn[2]))
|
|
1778
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/dataM[i]*100)
|
|
1779
|
+
elif elements_basalt[i][j][0] == "Fe":
|
|
1780
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/(0.001*chemFe[2]))
|
|
1781
|
+
elements_basalt[i][j].append(elements_basalt[i][j][1]/dataM[i]*100)
|
|
1782
|
+
results_basalt = []
|
|
1783
|
+
for i in range(0, len(elements_basalt)):
|
|
1784
|
+
results_basalt.append(["basalt", round(dataM[i],3)])
|
|
1785
|
+
for i in range(0, len(elements_basalt)):
|
|
1786
|
+
for j in range(0, len(elements_basalt[i])):
|
|
1787
|
+
results_basalt[i].append([elements_basalt[i][j][0], round(elements_basalt[i][j][1],3), round(elements_basalt[i][j][2],1), round(elements_basalt[i][j][3],2)])
|
|
1788
|
+
#
|
|
1789
|
+
#print(results_basalt)
|
|
1790
|
+
results.append(results_basalt)
|
|
1791
|
+
#print("Results Basalt:")
|
|
1792
|
+
#for j in range(0, len(results_basalt)):
|
|
1793
|
+
# print(j+1, ":", results_basalt[j])
|
|
1794
|
+
#
|
|
1795
|
+
# WRITING A CSV FILE
|
|
1796
|
+
try:
|
|
1797
|
+
Geochemistry_Basalt = open("./outputs/Geochemistry_Basalt.csv","w")
|
|
1798
|
+
except:
|
|
1799
|
+
print("Error")
|
|
1800
|
+
sys.exit(0)
|
|
1801
|
+
Geochemistry_Basalt.write(str("rock")+","+str("sample mass")+","+str("H")+","+str("O")+","+str("F")+","+str("Na")+","+str("Mg")+","+str("Al")+","+str("Si")+","+str("K")+","+str("Ca")+","+str("Mn")+","+str("Fe")+"\n")
|
|
1802
|
+
for i in range(0, len(results_basalt)):
|
|
1803
|
+
Geochemistry_Basalt.write(str(results_basalt[i][0])+","+str(results_basalt[i][1])+","+str(results_basalt[i][9][1]/results_basalt[i][1])+","+str(results_basalt[i][6][1]/results_basalt[i][1])+","+str(results_basalt[i][10][1]/results_basalt[i][1])+","+str(results_basalt[i][2][1]/results_basalt[i][1])+","+str(results_basalt[i][7][1]/results_basalt[i][1])+","+str(results_basalt[i][4][1]/results_basalt[i][1])+","+str(results_basalt[i][5][1]/results_basalt[i][1])+","+str(results_basalt[i][11][1]/results_basalt[i][1])+","+str(results_basalt[i][3][1]/results_basalt[i][1])+","+str(results_basalt[i][12][1]/results_basalt[i][1])+","+str(results_basalt[i][8][1]/results_basalt[i][1])+"\n")
|
|
1804
|
+
#
|
|
1805
|
+
return results
|