endoreg-db 0.8.6.1__py3-none-any.whl → 0.8.8.9__py3-none-any.whl

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  1. endoreg_db/authz/auth.py +74 -0
  2. endoreg_db/authz/backends.py +168 -0
  3. endoreg_db/authz/management/commands/list_routes.py +18 -0
  4. endoreg_db/authz/middleware.py +83 -0
  5. endoreg_db/authz/permissions.py +127 -0
  6. endoreg_db/authz/policy.py +218 -0
  7. endoreg_db/authz/views_auth.py +66 -0
  8. endoreg_db/config/env.py +13 -8
  9. endoreg_db/data/__init__.py +2 -11
  10. endoreg_db/data/ai_model_meta/default_multilabel_classification.yaml +3 -3
  11. endoreg_db/data/event_classification/data.yaml +4 -0
  12. endoreg_db/data/event_classification_choice/data.yaml +9 -0
  13. endoreg_db/data/examination/examinations/data.yaml +114 -14
  14. endoreg_db/data/examination/time-type/data.yaml +0 -3
  15. endoreg_db/data/examination_indication/endoscopy.yaml +108 -173
  16. endoreg_db/data/examination_indication_classification/endoscopy.yaml +0 -70
  17. endoreg_db/data/examination_indication_classification_choice/endoscopy.yaml +33 -37
  18. endoreg_db/data/finding/00_generic.yaml +35 -0
  19. endoreg_db/data/finding/00_generic_complication.yaml +9 -0
  20. endoreg_db/data/finding/01_gastroscopy_baseline.yaml +88 -0
  21. endoreg_db/data/finding/01_gastroscopy_observation.yaml +113 -0
  22. endoreg_db/data/finding/02_colonoscopy_baseline.yaml +53 -0
  23. endoreg_db/data/finding/02_colonoscopy_hidden.yaml +119 -0
  24. endoreg_db/data/finding/02_colonoscopy_observation.yaml +152 -0
  25. endoreg_db/data/finding_classification/00_generic.yaml +44 -0
  26. endoreg_db/data/finding_classification/00_generic_histology.yaml +28 -0
  27. endoreg_db/data/finding_classification/00_generic_lesion.yaml +52 -0
  28. endoreg_db/data/finding_classification/02_colonoscopy_baseline.yaml +83 -0
  29. endoreg_db/data/finding_classification/02_colonoscopy_histology.yaml +13 -0
  30. endoreg_db/data/finding_classification/02_colonoscopy_other.yaml +12 -0
  31. endoreg_db/data/finding_classification/02_colonoscopy_polyp.yaml +101 -0
  32. endoreg_db/data/finding_classification_choice/{yes_no_na.yaml → 00_generic.yaml} +5 -1
  33. endoreg_db/data/finding_classification_choice/{examination_setting_generic_types.yaml → 00_generic_baseline.yaml} +10 -2
  34. endoreg_db/data/finding_classification_choice/{complication_generic_types.yaml → 00_generic_complication.yaml} +1 -1
  35. endoreg_db/data/finding_classification_choice/{histology.yaml → 00_generic_histology.yaml} +1 -4
  36. endoreg_db/data/finding_classification_choice/00_generic_lesion.yaml +158 -0
  37. endoreg_db/data/finding_classification_choice/{bowel_preparation.yaml → 02_colonoscopy_bowel_preparation.yaml} +1 -30
  38. endoreg_db/data/finding_classification_choice/{colonoscopy_not_complete_reason.yaml → 02_colonoscopy_generic.yaml} +1 -1
  39. endoreg_db/data/finding_classification_choice/{histology_polyp.yaml → 02_colonoscopy_histology.yaml} +1 -1
  40. endoreg_db/data/finding_classification_choice/{colonoscopy_location.yaml → 02_colonoscopy_location.yaml} +23 -4
  41. endoreg_db/data/finding_classification_choice/02_colonoscopy_other.yaml +34 -0
  42. endoreg_db/data/finding_classification_choice/02_colonoscopy_polyp_advanced_imaging.yaml +76 -0
  43. endoreg_db/data/finding_classification_choice/{colon_lesion_paris.yaml → 02_colonoscopy_polyp_morphology.yaml} +26 -8
  44. endoreg_db/data/finding_classification_choice/02_colonoscopy_size.yaml +27 -0
  45. endoreg_db/data/finding_classification_type/{colonoscopy_basic.yaml → 00_generic.yaml} +18 -13
  46. endoreg_db/data/finding_classification_type/02_colonoscopy.yaml +9 -0
  47. endoreg_db/data/finding_intervention/00_generic_endoscopy.yaml +59 -0
  48. endoreg_db/data/finding_intervention/00_generic_endoscopy_ablation.yaml +44 -0
  49. endoreg_db/data/finding_intervention/00_generic_endoscopy_bleeding.yaml +55 -0
  50. endoreg_db/data/finding_intervention/00_generic_endoscopy_resection.yaml +85 -0
  51. endoreg_db/data/finding_intervention/00_generic_endoscopy_stenosis.yaml +17 -0
  52. endoreg_db/data/finding_intervention/00_generic_endoscopy_stent.yaml +9 -0
  53. endoreg_db/data/finding_intervention/01_gastroscopy.yaml +19 -0
  54. endoreg_db/data/finding_intervention/04_eus.yaml +39 -0
  55. endoreg_db/data/finding_intervention/05_ercp.yaml +3 -0
  56. endoreg_db/data/finding_type/data.yaml +8 -12
  57. endoreg_db/data/requirement/01_patient_data.yaml +93 -0
  58. endoreg_db/data/requirement/old/colon_polyp_intervention.yaml +49 -0
  59. endoreg_db/data/requirement/old/coloreg_colon_polyp.yaml +49 -0
  60. endoreg_db/data/requirement_operator/new_operators.yaml +36 -0
  61. endoreg_db/data/requirement_set/01_endoscopy_generic.yaml +29 -12
  62. endoreg_db/data/requirement_set/01_laboratory.yaml +13 -0
  63. endoreg_db/data/requirement_set/{endoscopy_bleeding_risk.yaml → 02_endoscopy_bleeding_risk.yaml} +0 -6
  64. endoreg_db/data/requirement_set/90_coloreg.yaml +190 -0
  65. endoreg_db/data/requirement_set/_old_ +109 -0
  66. endoreg_db/data/requirement_set_type/data.yaml +21 -0
  67. endoreg_db/data/setup_config.yaml +4 -4
  68. endoreg_db/data/tag/requirement_set_tags.yaml +21 -0
  69. endoreg_db/exceptions.py +4 -2
  70. endoreg_db/forms/examination_form.py +1 -1
  71. endoreg_db/helpers/data_loader.py +125 -53
  72. endoreg_db/helpers/default_objects.py +116 -81
  73. endoreg_db/import_files/__init__.py +27 -0
  74. endoreg_db/import_files/context/__init__.py +7 -0
  75. endoreg_db/import_files/context/default_sensitive_meta.py +81 -0
  76. endoreg_db/import_files/context/ensure_center.py +17 -0
  77. endoreg_db/import_files/context/file_lock.py +66 -0
  78. endoreg_db/import_files/context/import_context.py +43 -0
  79. endoreg_db/import_files/context/validate_directories.py +56 -0
  80. endoreg_db/import_files/file_storage/__init__.py +15 -0
  81. endoreg_db/import_files/file_storage/create_report_file.py +76 -0
  82. endoreg_db/import_files/file_storage/create_video_file.py +75 -0
  83. endoreg_db/import_files/file_storage/sensitive_meta_storage.py +39 -0
  84. endoreg_db/import_files/file_storage/state_management.py +400 -0
  85. endoreg_db/import_files/file_storage/storage.py +36 -0
  86. endoreg_db/import_files/import_service.md +26 -0
  87. endoreg_db/import_files/processing/__init__.py +11 -0
  88. endoreg_db/import_files/processing/report_processing/report_anonymization.py +94 -0
  89. endoreg_db/import_files/processing/sensitive_meta_adapter.py +51 -0
  90. endoreg_db/import_files/processing/video_processing/video_anonymization.py +107 -0
  91. endoreg_db/import_files/processing/video_processing/video_cleanup_on_error.py +119 -0
  92. endoreg_db/import_files/pseudonymization/fake.py +52 -0
  93. endoreg_db/import_files/pseudonymization/k_anonymity.py +182 -0
  94. endoreg_db/import_files/pseudonymization/k_pseudonymity.py +128 -0
  95. endoreg_db/import_files/report_import_service.py +141 -0
  96. endoreg_db/import_files/video_import_service.py +150 -0
  97. endoreg_db/management/commands/create_model_meta_from_huggingface.py +21 -10
  98. endoreg_db/management/commands/create_multilabel_model_meta.py +299 -129
  99. endoreg_db/management/commands/import_report.py +130 -65
  100. endoreg_db/management/commands/import_video.py +9 -10
  101. endoreg_db/management/commands/import_video_with_classification.py +2 -2
  102. endoreg_db/management/commands/list_routes.py +18 -0
  103. endoreg_db/management/commands/load_ai_model_data.py +5 -5
  104. endoreg_db/management/commands/load_ai_model_label_data.py +9 -7
  105. endoreg_db/management/commands/load_base_db_data.py +5 -134
  106. endoreg_db/management/commands/load_center_data.py +12 -12
  107. endoreg_db/management/commands/load_contraindication_data.py +14 -16
  108. endoreg_db/management/commands/load_disease_classification_choices_data.py +15 -18
  109. endoreg_db/management/commands/load_disease_classification_data.py +15 -18
  110. endoreg_db/management/commands/load_disease_data.py +25 -28
  111. endoreg_db/management/commands/load_endoscope_data.py +20 -27
  112. endoreg_db/management/commands/load_event_data.py +14 -16
  113. endoreg_db/management/commands/load_examination_data.py +31 -44
  114. endoreg_db/management/commands/load_examination_indication_data.py +20 -21
  115. endoreg_db/management/commands/load_finding_data.py +52 -80
  116. endoreg_db/management/commands/load_information_source.py +21 -23
  117. endoreg_db/management/commands/load_lab_value_data.py +17 -26
  118. endoreg_db/management/commands/load_medication_data.py +13 -12
  119. endoreg_db/management/commands/load_organ_data.py +15 -19
  120. endoreg_db/management/commands/load_pdf_type_data.py +19 -18
  121. endoreg_db/management/commands/load_profession_data.py +14 -17
  122. endoreg_db/management/commands/load_qualification_data.py +20 -23
  123. endoreg_db/management/commands/load_report_reader_flag_data.py +17 -19
  124. endoreg_db/management/commands/load_requirement_data.py +62 -39
  125. endoreg_db/management/commands/load_requirement_set_tags.py +95 -0
  126. endoreg_db/management/commands/load_risk_data.py +7 -6
  127. endoreg_db/management/commands/load_shift_data.py +20 -23
  128. endoreg_db/management/commands/load_tag_data.py +8 -11
  129. endoreg_db/management/commands/load_unit_data.py +17 -19
  130. endoreg_db/management/commands/setup_endoreg_db.py +3 -3
  131. endoreg_db/management/commands/start_filewatcher.py +46 -37
  132. endoreg_db/management/commands/storage_management.py +271 -203
  133. endoreg_db/management/commands/validate_video_files.py +1 -5
  134. endoreg_db/migrations/0001_initial.py +297 -250
  135. endoreg_db/models/__init__.py +78 -123
  136. endoreg_db/models/administration/__init__.py +21 -42
  137. endoreg_db/models/administration/ai/active_model.py +2 -2
  138. endoreg_db/models/administration/ai/ai_model.py +7 -6
  139. endoreg_db/models/administration/case/__init__.py +1 -15
  140. endoreg_db/models/administration/case/case.py +3 -3
  141. endoreg_db/models/administration/case/case_template/__init__.py +2 -14
  142. endoreg_db/models/administration/case/case_template/case_template.py +2 -124
  143. endoreg_db/models/administration/case/case_template/case_template_rule.py +2 -268
  144. endoreg_db/models/administration/case/case_template/case_template_rule_value.py +2 -85
  145. endoreg_db/models/administration/case/case_template/case_template_type.py +2 -25
  146. endoreg_db/models/administration/center/center.py +33 -19
  147. endoreg_db/models/administration/center/center_product.py +12 -9
  148. endoreg_db/models/administration/center/center_resource.py +25 -19
  149. endoreg_db/models/administration/center/center_shift.py +21 -17
  150. endoreg_db/models/administration/center/center_waste.py +16 -8
  151. endoreg_db/models/administration/person/__init__.py +2 -0
  152. endoreg_db/models/administration/person/employee/employee.py +10 -5
  153. endoreg_db/models/administration/person/employee/employee_qualification.py +9 -4
  154. endoreg_db/models/administration/person/employee/employee_type.py +12 -6
  155. endoreg_db/models/administration/person/examiner/examiner.py +13 -11
  156. endoreg_db/models/administration/person/patient/__init__.py +2 -0
  157. endoreg_db/models/administration/person/patient/patient.py +129 -100
  158. endoreg_db/models/administration/person/patient/patient_external_id.py +37 -0
  159. endoreg_db/models/administration/person/person.py +4 -0
  160. endoreg_db/models/administration/person/profession/__init__.py +8 -4
  161. endoreg_db/models/administration/person/user/portal_user_information.py +11 -7
  162. endoreg_db/models/administration/product/product.py +20 -15
  163. endoreg_db/models/administration/product/product_material.py +17 -18
  164. endoreg_db/models/administration/product/product_weight.py +12 -8
  165. endoreg_db/models/administration/product/reference_product.py +23 -55
  166. endoreg_db/models/administration/qualification/qualification.py +7 -3
  167. endoreg_db/models/administration/qualification/qualification_type.py +7 -3
  168. endoreg_db/models/administration/shift/scheduled_days.py +8 -5
  169. endoreg_db/models/administration/shift/shift.py +16 -12
  170. endoreg_db/models/administration/shift/shift_type.py +23 -31
  171. endoreg_db/models/label/__init__.py +8 -9
  172. endoreg_db/models/label/annotation/image_classification.py +10 -9
  173. endoreg_db/models/label/annotation/video_segmentation_annotation.py +23 -28
  174. endoreg_db/models/label/label.py +15 -15
  175. endoreg_db/models/label/label_set.py +19 -6
  176. endoreg_db/models/label/label_type.py +1 -1
  177. endoreg_db/models/label/label_video_segment/_create_from_video.py +5 -8
  178. endoreg_db/models/label/label_video_segment/label_video_segment.py +98 -102
  179. endoreg_db/models/label/video_segmentation_label.py +4 -0
  180. endoreg_db/models/label/video_segmentation_labelset.py +4 -3
  181. endoreg_db/models/media/frame/frame.py +22 -22
  182. endoreg_db/models/media/pdf/raw_pdf.py +194 -194
  183. endoreg_db/models/media/pdf/report_file.py +25 -29
  184. endoreg_db/models/media/pdf/report_reader/report_reader_config.py +55 -47
  185. endoreg_db/models/media/pdf/report_reader/report_reader_flag.py +23 -7
  186. endoreg_db/models/media/processing_history/__init__.py +5 -0
  187. endoreg_db/models/media/processing_history/processing_history.py +96 -0
  188. endoreg_db/models/media/video/__init__.py +1 -0
  189. endoreg_db/models/media/video/create_from_file.py +139 -77
  190. endoreg_db/models/media/video/pipe_2.py +8 -9
  191. endoreg_db/models/media/video/video_file.py +174 -112
  192. endoreg_db/models/media/video/video_file_ai.py +288 -74
  193. endoreg_db/models/media/video/video_file_anonymize.py +38 -38
  194. endoreg_db/models/media/video/video_file_frames/__init__.py +3 -1
  195. endoreg_db/models/media/video/video_file_frames/_bulk_create_frames.py +6 -8
  196. endoreg_db/models/media/video/video_file_frames/_create_frame_object.py +7 -9
  197. endoreg_db/models/media/video/video_file_frames/_delete_frames.py +9 -8
  198. endoreg_db/models/media/video/video_file_frames/_extract_frames.py +38 -45
  199. endoreg_db/models/media/video/video_file_frames/_get_frame.py +6 -8
  200. endoreg_db/models/media/video/video_file_frames/_get_frame_number.py +4 -18
  201. endoreg_db/models/media/video/video_file_frames/_get_frame_path.py +4 -3
  202. endoreg_db/models/media/video/video_file_frames/_get_frame_paths.py +7 -6
  203. endoreg_db/models/media/video/video_file_frames/_get_frame_range.py +6 -8
  204. endoreg_db/models/media/video/video_file_frames/_get_frames.py +6 -8
  205. endoreg_db/models/media/video/video_file_frames/_initialize_frames.py +15 -25
  206. endoreg_db/models/media/video/video_file_frames/_manage_frame_range.py +26 -23
  207. endoreg_db/models/media/video/video_file_frames/_mark_frames_extracted_status.py +23 -14
  208. endoreg_db/models/media/video/video_file_io.py +113 -61
  209. endoreg_db/models/media/video/video_file_meta/get_crop_template.py +3 -3
  210. endoreg_db/models/media/video/video_file_meta/get_endo_roi.py +5 -3
  211. endoreg_db/models/media/video/video_file_meta/get_fps.py +37 -34
  212. endoreg_db/models/media/video/video_file_meta/initialize_video_specs.py +19 -25
  213. endoreg_db/models/media/video/video_file_meta/text_meta.py +41 -38
  214. endoreg_db/models/media/video/video_file_meta/video_meta.py +14 -7
  215. endoreg_db/models/media/video/video_file_segments.py +24 -17
  216. endoreg_db/models/media/video/video_metadata.py +19 -35
  217. endoreg_db/models/media/video/video_processing.py +96 -95
  218. endoreg_db/models/medical/contraindication/README.md +1 -0
  219. endoreg_db/models/medical/contraindication/__init__.py +13 -3
  220. endoreg_db/models/medical/disease.py +22 -16
  221. endoreg_db/models/medical/event.py +31 -18
  222. endoreg_db/models/medical/examination/__init__.py +13 -6
  223. endoreg_db/models/medical/examination/examination.py +39 -20
  224. endoreg_db/models/medical/examination/examination_indication.py +30 -95
  225. endoreg_db/models/medical/examination/examination_time.py +23 -8
  226. endoreg_db/models/medical/examination/examination_time_type.py +9 -6
  227. endoreg_db/models/medical/examination/examination_type.py +3 -4
  228. endoreg_db/models/medical/finding/finding.py +32 -40
  229. endoreg_db/models/medical/finding/finding_classification.py +42 -72
  230. endoreg_db/models/medical/finding/finding_intervention.py +25 -22
  231. endoreg_db/models/medical/finding/finding_type.py +13 -12
  232. endoreg_db/models/medical/hardware/endoscope.py +26 -26
  233. endoreg_db/models/medical/hardware/endoscopy_processor.py +2 -2
  234. endoreg_db/models/medical/laboratory/lab_value.py +62 -91
  235. endoreg_db/models/medical/medication/medication.py +22 -10
  236. endoreg_db/models/medical/medication/medication_indication.py +29 -3
  237. endoreg_db/models/medical/medication/medication_indication_type.py +25 -14
  238. endoreg_db/models/medical/medication/medication_intake_time.py +31 -19
  239. endoreg_db/models/medical/medication/medication_schedule.py +27 -16
  240. endoreg_db/models/medical/organ/__init__.py +15 -12
  241. endoreg_db/models/medical/patient/medication_examples.py +6 -6
  242. endoreg_db/models/medical/patient/patient_disease.py +20 -23
  243. endoreg_db/models/medical/patient/patient_event.py +19 -22
  244. endoreg_db/models/medical/patient/patient_examination.py +48 -54
  245. endoreg_db/models/medical/patient/patient_examination_indication.py +16 -14
  246. endoreg_db/models/medical/patient/patient_finding.py +122 -139
  247. endoreg_db/models/medical/patient/patient_finding_classification.py +44 -49
  248. endoreg_db/models/medical/patient/patient_finding_intervention.py +8 -19
  249. endoreg_db/models/medical/patient/patient_lab_sample.py +28 -23
  250. endoreg_db/models/medical/patient/patient_lab_value.py +82 -89
  251. endoreg_db/models/medical/patient/patient_medication.py +27 -38
  252. endoreg_db/models/medical/patient/patient_medication_schedule.py +28 -36
  253. endoreg_db/models/medical/risk/risk.py +7 -6
  254. endoreg_db/models/medical/risk/risk_type.py +8 -5
  255. endoreg_db/models/metadata/model_meta.py +60 -29
  256. endoreg_db/models/metadata/model_meta_logic.py +125 -18
  257. endoreg_db/models/metadata/pdf_meta.py +31 -24
  258. endoreg_db/models/metadata/sensitive_meta.py +105 -85
  259. endoreg_db/models/metadata/sensitive_meta_logic.py +198 -103
  260. endoreg_db/models/metadata/video_meta.py +51 -31
  261. endoreg_db/models/metadata/video_prediction_logic.py +16 -23
  262. endoreg_db/models/metadata/video_prediction_meta.py +29 -33
  263. endoreg_db/models/other/distribution/date_value_distribution.py +89 -29
  264. endoreg_db/models/other/distribution/multiple_categorical_value_distribution.py +21 -5
  265. endoreg_db/models/other/distribution/numeric_value_distribution.py +114 -53
  266. endoreg_db/models/other/distribution/single_categorical_value_distribution.py +4 -3
  267. endoreg_db/models/other/emission/emission_factor.py +18 -8
  268. endoreg_db/models/other/gender.py +10 -5
  269. endoreg_db/models/other/information_source.py +50 -29
  270. endoreg_db/models/other/material.py +9 -5
  271. endoreg_db/models/other/resource.py +6 -4
  272. endoreg_db/models/other/tag.py +10 -5
  273. endoreg_db/models/other/transport_route.py +13 -8
  274. endoreg_db/models/other/unit.py +10 -6
  275. endoreg_db/models/other/waste.py +6 -5
  276. endoreg_db/models/report/report.py +6 -0
  277. endoreg_db/models/requirement/requirement.py +329 -361
  278. endoreg_db/models/requirement/requirement_error.py +85 -0
  279. endoreg_db/models/requirement/requirement_evaluation/evaluate_with_dependencies.py +268 -0
  280. endoreg_db/models/requirement/requirement_evaluation/operator_evaluation_models.py +3 -6
  281. endoreg_db/models/requirement/requirement_evaluation/requirement_type_parser.py +90 -64
  282. endoreg_db/models/requirement/requirement_operator.py +103 -112
  283. endoreg_db/models/requirement/requirement_set.py +74 -57
  284. endoreg_db/models/state/__init__.py +4 -4
  285. endoreg_db/models/state/abstract.py +2 -2
  286. endoreg_db/models/state/anonymization.py +12 -0
  287. endoreg_db/models/state/audit_ledger.py +49 -51
  288. endoreg_db/models/state/label_video_segment.py +9 -0
  289. endoreg_db/models/state/raw_pdf.py +101 -68
  290. endoreg_db/models/state/sensitive_meta.py +6 -2
  291. endoreg_db/models/state/video.py +110 -90
  292. endoreg_db/models/upload_job.py +35 -34
  293. endoreg_db/models/utils.py +28 -25
  294. endoreg_db/queries/__init__.py +3 -1
  295. endoreg_db/root_urls.py +21 -2
  296. endoreg_db/schemas/examination_evaluation.py +1 -1
  297. endoreg_db/serializers/__init__.py +2 -10
  298. endoreg_db/serializers/anonymization.py +18 -10
  299. endoreg_db/serializers/label_video_segment/label_video_segment.py +2 -29
  300. endoreg_db/serializers/meta/__init__.py +1 -6
  301. endoreg_db/serializers/meta/sensitive_meta_detail.py +63 -118
  302. endoreg_db/serializers/misc/file_overview.py +11 -99
  303. endoreg_db/serializers/misc/sensitive_patient_data.py +50 -26
  304. endoreg_db/serializers/patient_examination/patient_examination.py +3 -3
  305. endoreg_db/serializers/pdf/anony_text_validation.py +39 -23
  306. endoreg_db/serializers/requirements/requirement_sets.py +92 -22
  307. endoreg_db/serializers/video/segmentation.py +2 -1
  308. endoreg_db/serializers/video/video_file_list.py +65 -34
  309. endoreg_db/serializers/video/video_processing_history.py +20 -5
  310. endoreg_db/services/__old/pdf_import.py +1487 -0
  311. endoreg_db/services/__old/video_import.py +1306 -0
  312. endoreg_db/services/anonymization.py +128 -89
  313. endoreg_db/services/lookup_service.py +65 -52
  314. endoreg_db/services/lookup_store.py +2 -2
  315. endoreg_db/services/pdf_import.py +0 -1382
  316. endoreg_db/services/report_import.py +10 -0
  317. endoreg_db/services/video_import.py +6 -1255
  318. endoreg_db/tasks/upload_tasks.py +79 -70
  319. endoreg_db/tasks/video_ingest.py +8 -4
  320. endoreg_db/urls/__init__.py +5 -32
  321. endoreg_db/urls/ai.py +32 -0
  322. endoreg_db/urls/media.py +121 -83
  323. endoreg_db/urls/root_urls.py +29 -0
  324. endoreg_db/utils/__init__.py +15 -5
  325. endoreg_db/utils/ai/multilabel_classification_net.py +116 -20
  326. endoreg_db/utils/case_generator/__init__.py +3 -0
  327. endoreg_db/utils/dataloader.py +142 -40
  328. endoreg_db/utils/defaults/set_default_center.py +32 -0
  329. endoreg_db/utils/names.py +22 -16
  330. endoreg_db/utils/paths.py +110 -46
  331. endoreg_db/utils/permissions.py +2 -1
  332. endoreg_db/utils/pipelines/Readme.md +1 -1
  333. endoreg_db/utils/pipelines/process_video_dir.py +1 -1
  334. endoreg_db/utils/requirement_operator_logic/_old/model_evaluators.py +655 -0
  335. endoreg_db/utils/requirement_operator_logic/new_operator_logic.py +97 -0
  336. endoreg_db/utils/setup_config.py +8 -5
  337. endoreg_db/utils/storage.py +115 -0
  338. endoreg_db/utils/validate_endo_roi.py +8 -2
  339. endoreg_db/utils/video/ffmpeg_wrapper.py +184 -188
  340. endoreg_db/views/__init__.py +85 -183
  341. endoreg_db/views/ai/__init__.py +8 -0
  342. endoreg_db/views/ai/label.py +155 -0
  343. endoreg_db/views/anonymization/media_management.py +202 -166
  344. endoreg_db/views/anonymization/overview.py +99 -67
  345. endoreg_db/views/anonymization/validate.py +182 -44
  346. endoreg_db/views/media/__init__.py +7 -20
  347. endoreg_db/views/media/pdf_media.py +197 -174
  348. endoreg_db/views/media/sensitive_metadata.py +193 -138
  349. endoreg_db/views/media/video_media.py +89 -82
  350. endoreg_db/views/meta/__init__.py +0 -8
  351. endoreg_db/views/misc/__init__.py +1 -7
  352. endoreg_db/views/misc/upload_views.py +94 -93
  353. endoreg_db/views/patient/patient.py +5 -4
  354. endoreg_db/views/report/__init__.py +5 -7
  355. endoreg_db/views/{pdf → report}/reimport.py +22 -22
  356. endoreg_db/views/{pdf/pdf_stream.py → report/report_stream.py} +46 -39
  357. endoreg_db/views/requirement/evaluate.py +188 -187
  358. endoreg_db/views/requirement/lookup.py +17 -3
  359. endoreg_db/views/requirement/lookup_store.py +22 -90
  360. endoreg_db/views/requirement/requirement_utils.py +89 -0
  361. endoreg_db/views/video/__init__.py +23 -24
  362. endoreg_db/views/video/correction.py +201 -172
  363. endoreg_db/views/video/reimport.py +1 -1
  364. endoreg_db/views/{media/video_segments.py → video/segments_crud.py} +77 -40
  365. endoreg_db/views/video/{video_meta.py → video_meta_stats.py} +2 -2
  366. endoreg_db/views/video/video_stream.py +7 -8
  367. {endoreg_db-0.8.6.1.dist-info → endoreg_db-0.8.8.9.dist-info}/METADATA +7 -3
  368. {endoreg_db-0.8.6.1.dist-info → endoreg_db-0.8.8.9.dist-info}/RECORD +391 -413
  369. {endoreg_db-0.8.6.1.dist-info → endoreg_db-0.8.8.9.dist-info}/WHEEL +1 -1
  370. endoreg_db/data/finding/anatomy_colon.yaml +0 -128
  371. endoreg_db/data/finding/colonoscopy.yaml +0 -40
  372. endoreg_db/data/finding/colonoscopy_bowel_prep.yaml +0 -56
  373. endoreg_db/data/finding/complication.yaml +0 -16
  374. endoreg_db/data/finding/data.yaml +0 -105
  375. endoreg_db/data/finding/examination_setting.yaml +0 -16
  376. endoreg_db/data/finding/medication_related.yaml +0 -18
  377. endoreg_db/data/finding/outcome.yaml +0 -12
  378. endoreg_db/data/finding_classification/colonoscopy_bowel_preparation.yaml +0 -95
  379. endoreg_db/data/finding_classification/colonoscopy_jnet.yaml +0 -22
  380. endoreg_db/data/finding_classification/colonoscopy_kudo.yaml +0 -25
  381. endoreg_db/data/finding_classification/colonoscopy_lesion_circularity.yaml +0 -20
  382. endoreg_db/data/finding_classification/colonoscopy_lesion_planarity.yaml +0 -24
  383. endoreg_db/data/finding_classification/colonoscopy_lesion_size.yaml +0 -68
  384. endoreg_db/data/finding_classification/colonoscopy_lesion_surface.yaml +0 -20
  385. endoreg_db/data/finding_classification/colonoscopy_location.yaml +0 -80
  386. endoreg_db/data/finding_classification/colonoscopy_lst.yaml +0 -21
  387. endoreg_db/data/finding_classification/colonoscopy_nice.yaml +0 -20
  388. endoreg_db/data/finding_classification/colonoscopy_paris.yaml +0 -26
  389. endoreg_db/data/finding_classification/colonoscopy_sano.yaml +0 -22
  390. endoreg_db/data/finding_classification/colonoscopy_summary.yaml +0 -53
  391. endoreg_db/data/finding_classification/complication_generic.yaml +0 -25
  392. endoreg_db/data/finding_classification/examination_setting_generic.yaml +0 -40
  393. endoreg_db/data/finding_classification/histology_colo.yaml +0 -51
  394. endoreg_db/data/finding_classification/intervention_required.yaml +0 -26
  395. endoreg_db/data/finding_classification/medication_related.yaml +0 -23
  396. endoreg_db/data/finding_classification/visualized.yaml +0 -33
  397. endoreg_db/data/finding_classification_choice/colon_lesion_circularity_default.yaml +0 -32
  398. endoreg_db/data/finding_classification_choice/colon_lesion_jnet.yaml +0 -15
  399. endoreg_db/data/finding_classification_choice/colon_lesion_kudo.yaml +0 -23
  400. endoreg_db/data/finding_classification_choice/colon_lesion_lst.yaml +0 -15
  401. endoreg_db/data/finding_classification_choice/colon_lesion_nice.yaml +0 -17
  402. endoreg_db/data/finding_classification_choice/colon_lesion_planarity_default.yaml +0 -49
  403. endoreg_db/data/finding_classification_choice/colon_lesion_sano.yaml +0 -14
  404. endoreg_db/data/finding_classification_choice/colon_lesion_surface_intact_default.yaml +0 -36
  405. endoreg_db/data/finding_classification_choice/colonoscopy_size.yaml +0 -82
  406. endoreg_db/data/finding_classification_choice/colonoscopy_summary_worst_finding.yaml +0 -15
  407. endoreg_db/data/finding_classification_choice/outcome.yaml +0 -19
  408. endoreg_db/data/finding_intervention/endoscopy.yaml +0 -43
  409. endoreg_db/data/finding_intervention/endoscopy_colonoscopy.yaml +0 -168
  410. endoreg_db/data/finding_intervention/endoscopy_egd.yaml +0 -128
  411. endoreg_db/data/finding_intervention/endoscopy_ercp.yaml +0 -32
  412. endoreg_db/data/finding_intervention/endoscopy_eus_lower.yaml +0 -9
  413. endoreg_db/data/finding_intervention/endoscopy_eus_upper.yaml +0 -36
  414. endoreg_db/data/finding_morphology_classification_type/colonoscopy.yaml +0 -79
  415. endoreg_db/data/requirement/age.yaml +0 -26
  416. endoreg_db/data/requirement/gender.yaml +0 -25
  417. endoreg_db/management/commands/init_default_ai_model.py +0 -112
  418. endoreg_db/management/commands/reset_celery_schedule.py +0 -9
  419. endoreg_db/management/commands/validate_video.py +0 -204
  420. endoreg_db/migrations/0002_add_video_correction_models.py +0 -52
  421. endoreg_db/migrations/0003_add_center_display_name.py +0 -30
  422. endoreg_db/models/administration/permissions/__init__.py +0 -44
  423. endoreg_db/models/rule/__init__.py +0 -13
  424. endoreg_db/models/rule/rule.py +0 -27
  425. endoreg_db/models/rule/rule_applicator.py +0 -224
  426. endoreg_db/models/rule/rule_attribute_dtype.py +0 -17
  427. endoreg_db/models/rule/rule_type.py +0 -20
  428. endoreg_db/models/rule/ruleset.py +0 -17
  429. endoreg_db/renames.yml +0 -8
  430. endoreg_db/serializers/_old/raw_pdf_meta_validation.py +0 -223
  431. endoreg_db/serializers/_old/raw_video_meta_validation.py +0 -179
  432. endoreg_db/serializers/_old/video.py +0 -71
  433. endoreg_db/serializers/meta/pdf_file_meta_extraction.py +0 -115
  434. endoreg_db/serializers/meta/report_meta.py +0 -53
  435. endoreg_db/serializers/report/__init__.py +0 -9
  436. endoreg_db/serializers/report/mixins.py +0 -45
  437. endoreg_db/serializers/report/report.py +0 -105
  438. endoreg_db/serializers/report/report_list.py +0 -22
  439. endoreg_db/serializers/report/secure_file_url.py +0 -26
  440. endoreg_db/serializers/video/video_metadata.py +0 -105
  441. endoreg_db/services/requirements_object.py +0 -147
  442. endoreg_db/services/storage_aware_video_processor.py +0 -344
  443. endoreg_db/urls/files.py +0 -6
  444. endoreg_db/urls/label_video_segment_validate.py +0 -33
  445. endoreg_db/urls/label_video_segments.py +0 -46
  446. endoreg_db/urls/report.py +0 -48
  447. endoreg_db/urls/video.py +0 -61
  448. endoreg_db/utils/case_generator/case_generator.py +0 -159
  449. endoreg_db/utils/case_generator/utils.py +0 -30
  450. endoreg_db/utils/requirement_operator_logic/model_evaluators.py +0 -368
  451. endoreg_db/views/label/__init__.py +0 -5
  452. endoreg_db/views/label/label.py +0 -15
  453. endoreg_db/views/label_video_segment/__init__.py +0 -16
  454. endoreg_db/views/label_video_segment/create_lvs_from_annotation.py +0 -44
  455. endoreg_db/views/label_video_segment/get_lvs_by_name_and_video.py +0 -50
  456. endoreg_db/views/label_video_segment/label_video_segment.py +0 -77
  457. endoreg_db/views/label_video_segment/label_video_segment_by_label.py +0 -174
  458. endoreg_db/views/label_video_segment/label_video_segment_detail.py +0 -73
  459. endoreg_db/views/label_video_segment/update_lvs_from_annotation.py +0 -46
  460. endoreg_db/views/label_video_segment/validate.py +0 -226
  461. endoreg_db/views/media/segments.py +0 -71
  462. endoreg_db/views/meta/available_files_list.py +0 -146
  463. endoreg_db/views/meta/report_meta.py +0 -53
  464. endoreg_db/views/meta/sensitive_meta_detail.py +0 -148
  465. endoreg_db/views/misc/secure_file_serving_view.py +0 -80
  466. endoreg_db/views/misc/secure_file_url_view.py +0 -84
  467. endoreg_db/views/misc/secure_url_validate.py +0 -79
  468. endoreg_db/views/patient_examination/DEPRECATED_video_backup.py +0 -164
  469. endoreg_db/views/patient_finding_location/__init__.py +0 -5
  470. endoreg_db/views/patient_finding_location/pfl_create.py +0 -70
  471. endoreg_db/views/patient_finding_morphology/__init__.py +0 -5
  472. endoreg_db/views/patient_finding_morphology/pfm_create.py +0 -70
  473. endoreg_db/views/pdf/__init__.py +0 -8
  474. endoreg_db/views/report/report_list.py +0 -112
  475. endoreg_db/views/report/report_with_secure_url.py +0 -28
  476. endoreg_db/views/report/start_examination.py +0 -7
  477. endoreg_db/views/video/segmentation.py +0 -274
  478. endoreg_db/views/video/task_status.py +0 -49
  479. endoreg_db/views/video/timeline.py +0 -46
  480. endoreg_db/views/video/video_analyze.py +0 -52
  481. endoreg_db/views.py +0 -0
  482. /endoreg_db/data/requirement/{colonoscopy_baseline_austria.yaml → old/colonoscopy_baseline_austria.yaml} +0 -0
  483. /endoreg_db/data/requirement/{disease_cardiovascular.yaml → old/disease_cardiovascular.yaml} +0 -0
  484. /endoreg_db/data/requirement/{disease_classification_choice_cardiovascular.yaml → old/disease_classification_choice_cardiovascular.yaml} +0 -0
  485. /endoreg_db/data/requirement/{disease_hepatology.yaml → old/disease_hepatology.yaml} +0 -0
  486. /endoreg_db/data/requirement/{disease_misc.yaml → old/disease_misc.yaml} +0 -0
  487. /endoreg_db/data/requirement/{disease_renal.yaml → old/disease_renal.yaml} +0 -0
  488. /endoreg_db/data/requirement/{endoscopy_bleeding_risk.yaml → old/endoscopy_bleeding_risk.yaml} +0 -0
  489. /endoreg_db/data/requirement/{event_cardiology.yaml → old/event_cardiology.yaml} +0 -0
  490. /endoreg_db/data/requirement/{event_requirements.yaml → old/event_requirements.yaml} +0 -0
  491. /endoreg_db/data/requirement/{finding_colon_polyp.yaml → old/finding_colon_polyp.yaml} +0 -0
  492. /endoreg_db/{migrations/__init__.py → data/requirement/old/gender.yaml} +0 -0
  493. /endoreg_db/data/requirement/{lab_value.yaml → old/lab_value.yaml} +0 -0
  494. /endoreg_db/data/requirement/{medication.yaml → old/medication.yaml} +0 -0
  495. /endoreg_db/data/requirement_operator/{age.yaml → _old/age.yaml} +0 -0
  496. /endoreg_db/data/requirement_operator/{lab_operators.yaml → _old/lab_operators.yaml} +0 -0
  497. /endoreg_db/data/requirement_operator/{model_operators.yaml → _old/model_operators.yaml} +0 -0
  498. /endoreg_db/{models/media/video/refactor_plan.md → import_files/pseudonymization/__init__.py} +0 -0
  499. /endoreg_db/{models/media/video/video_file_frames.py → import_files/pseudonymization/pseudonymize.py} +0 -0
  500. /endoreg_db/models/{metadata/frame_ocr_result.py → report/__init__.py} +0 -0
  501. /endoreg_db/{urls/sensitive_meta.py → models/report/images.py} +0 -0
  502. /endoreg_db/utils/requirement_operator_logic/{lab_value_operators.py → _old/lab_value_operators.py} +0 -0
  503. {endoreg_db-0.8.6.1.dist-info → endoreg_db-0.8.8.9.dist-info}/licenses/LICENSE +0 -0
@@ -13,6 +13,7 @@ from rest_framework.response import Response
13
13
  from endoreg_db.services import lookup_service as ls
14
14
  from endoreg_db.services.lookup_store import DEFAULT_TTL_SECONDS, LookupStore
15
15
  from endoreg_db.utils.permissions import EnvironmentAwarePermission
16
+ from endoreg_db.models.other.tag import Tag
16
17
 
17
18
  ORIGIN_MAP_PREFIX = "lookup:origin:"
18
19
  ISSUED_MAP_PREFIX = "lookup:issued_for_internal:"
@@ -53,6 +54,8 @@ class LookupViewSet(viewsets.ViewSet):
53
54
  "selectedRequirementSetIds",
54
55
  "selectedChoices",
55
56
  }
57
+
58
+ user_tags = Tag
56
59
 
57
60
  @action(detail=False, methods=["post"])
58
61
  def init(self, request):
@@ -131,7 +134,10 @@ class LookupViewSet(viewsets.ViewSet):
131
134
 
132
135
  except Exception:
133
136
  pass
134
-
137
+
138
+ user_tags = request.data.get("user_tags", None)
139
+ if user_tags and not isinstance(user_tags, list):
140
+ user_tags = [user_tags]
135
141
  # Fallback to query params
136
142
  if raw_pe is None:
137
143
  raw_pe = request.query_params.get("patient_examination_id")
@@ -167,7 +173,11 @@ class LookupViewSet(viewsets.ViewSet):
167
173
 
168
174
  try:
169
175
  # Create internal session via service (may seed its own token/cache)
170
- internal_token = ls.create_lookup_token_for_pe(pe_id)
176
+ service_kwargs = {}
177
+ if user_tags:
178
+ service_kwargs["user_tags"] = user_tags
179
+
180
+ internal_token = ls.create_lookup_token_for_pe(pe_id, **service_kwargs)
171
181
  internal_data = LookupStore(token=internal_token).get_all()
172
182
 
173
183
  issued_key = f"{ISSUED_MAP_PREFIX}{internal_token}"
@@ -254,7 +264,11 @@ class LookupViewSet(viewsets.ViewSet):
254
264
  status=status.HTTP_404_NOT_FOUND,
255
265
  )
256
266
 
257
- return Response(new_data, status=status.HTTP_200_OK)
267
+ # Hydrate the original token with recovered data and refresh origin TTL
268
+ store.set_many(new_data)
269
+ cache.set(f"{ORIGIN_MAP_PREFIX}{pk}", pe_id, DEFAULT_TTL_SECONDS)
270
+ return Response(store.get_all(), status=status.HTTP_200_OK)
271
+
258
272
 
259
273
  except Exception:
260
274
  pass
@@ -3,36 +3,27 @@
3
3
  from __future__ import annotations
4
4
 
5
5
  import uuid
6
-
7
6
  from typing import Any, Dict, Iterable, Optional
8
7
 
9
- from django.core.cache import cache
10
-
11
-
12
8
  from django.conf import settings
9
+ from django.core.cache import cache
13
10
 
14
11
  from endoreg_db.models.medical import PatientExamination
15
12
 
16
-
17
-
18
13
  # Align TTL with Django cache TIMEOUT for consistency in tests and runtime
19
14
 
20
15
 
21
16
  try:
22
-
23
-
24
- DEFAULT_TTL_SECONDS = int(settings.CACHES.get('default', {}).get('TIMEOUT', 60 * 30))
17
+ DEFAULT_TTL_SECONDS = int(
18
+ settings.CACHES.get("default", {}).get("TIMEOUT", 60 * 30)
19
+ )
25
20
 
26
21
 
27
22
  except Exception:
28
-
29
-
30
23
  DEFAULT_TTL_SECONDS = 60 * 30 # 30 minutes fallback
31
24
 
32
25
 
33
-
34
26
  class LookupStore:
35
-
36
27
  """
37
28
 
38
29
  Server-side lookup dictionary stored in Django cache.
@@ -42,75 +33,48 @@ class LookupStore:
42
33
  """
43
34
 
44
35
  def __init__(self, token: Optional[str] = None):
45
-
46
36
  self.token = token or uuid.uuid4().hex
47
37
 
48
-
49
-
50
38
  @property
51
-
52
39
  def cache_key(self) -> str:
53
-
54
40
  return f"lookup:{self.token}"
55
41
 
56
-
57
-
58
- def init(self, initial: Optional[Dict[str, Any]] = None, ttl: int = DEFAULT_TTL_SECONDS) -> str:
59
-
42
+ def init(
43
+ self, initial: Optional[Dict[str, Any]] = None, ttl: int = DEFAULT_TTL_SECONDS
44
+ ) -> str:
60
45
  cache.set(self.cache_key, initial or {}, ttl)
61
46
 
62
47
  return self.token
63
48
 
64
-
65
-
66
49
  def get_all(self) -> Dict[str, Any]:
67
-
68
50
  return cache.get(self.cache_key, {})
69
51
 
70
-
71
-
72
52
  def get_many(self, keys: Iterable[str]) -> Dict[str, Any]:
73
-
74
53
  data = self.get_all()
75
54
 
76
55
  return {k: data.get(k) for k in keys}
77
56
 
78
-
79
-
80
57
  def set_many(self, updates: Dict[str, Any], ttl: int = DEFAULT_TTL_SECONDS) -> None:
81
-
82
58
  data = self.get_all()
83
59
 
84
60
  data.update(updates)
85
61
 
86
62
  cache.set(self.cache_key, data, ttl)
87
63
 
88
-
89
-
90
64
  def get(self, key: str, default: Any = None) -> Any:
91
-
92
65
  return self.get_all().get(key, default)
93
66
 
94
-
95
-
96
67
  def set(self, key: str, value: Any, ttl: int = DEFAULT_TTL_SECONDS) -> None:
97
-
98
68
  data = self.get_all()
99
69
 
100
70
  data[key] = value
101
71
 
102
72
  cache.set(self.cache_key, data, ttl)
103
73
 
104
-
105
-
106
74
  def delete(self) -> None:
107
-
108
75
  cache.delete(self.cache_key)
109
76
 
110
-
111
-
112
77
  def patch(self, updates: Dict[str, Any], ttl: int = DEFAULT_TTL_SECONDS) -> None:
113
-
114
78
  """Patch existing data with updates."""
115
79
 
116
80
  data = self.get_all()
@@ -119,73 +83,56 @@ class LookupStore:
119
83
 
120
84
  cache.set(self.cache_key, data, ttl)
121
85
 
122
-
123
-
124
-
125
-
126
86
  def validate_and_recover_data(self, token):
127
-
128
87
  """Validate stored data and attempt recovery if corrupted"""
129
88
 
130
89
  data = self.get_all()
131
90
 
132
-
133
-
134
91
  if not data:
135
-
136
92
  return None
137
93
 
138
-
139
-
140
94
  # Check if required fields are present
141
95
 
142
- required_fields = ['patient_examination_id', 'requirementsBySet', 'requirementStatus']
96
+ required_fields = [
97
+ "patient_examination_id",
98
+ "requirements_by_set",
99
+ "requirement_status",
100
+ ]
143
101
 
144
102
  missing_fields = [field for field in required_fields if field not in data]
145
103
 
146
-
147
-
148
104
  if missing_fields:
149
-
150
105
  import logging
151
106
 
152
107
  logger = logging.getLogger(__name__)
153
108
 
154
- logger.warning(f"Missing fields in lookup data for token {token}: {missing_fields}")
155
-
156
-
109
+ logger.warning(
110
+ f"Missing fields in lookup data for token {token}: {missing_fields}"
111
+ )
157
112
 
158
113
  # Try to recover patient_examination_id from token or related data
159
114
 
160
- if 'patient_examination_id' in missing_fields:
161
-
115
+ if "patient_examination_id" in missing_fields:
162
116
  # Attempt to extract from token or find related examination
163
117
 
164
118
  recovered_id = self._recover_patient_examination_id(token)
165
119
 
166
120
  if recovered_id:
121
+ data["patient_examination_id"] = recovered_id
167
122
 
168
- data['patient_examination_id'] = recovered_id
169
-
170
- logger.info(f"Recovered patient_examination_id {recovered_id} for token {token}")
171
-
172
-
123
+ logger.info(
124
+ f"Recovered patient_examination_id {recovered_id} for token {token}"
125
+ )
173
126
 
174
127
  # Do not automatically recompute here to avoid loops
175
128
 
176
-
177
129
  # Recompute is only triggered by PATCH or explicit POST /recompute/
178
130
 
179
131
  # For now, just return the data as is
180
132
 
181
-
182
-
183
133
  return data
184
134
 
185
-
186
-
187
135
  def _recover_patient_examination_id(self, token: str) -> Optional[str]:
188
-
189
136
  """
190
137
 
191
138
  Placeholder for recovering patient_examination_id.
@@ -200,30 +147,21 @@ class LookupStore:
200
147
 
201
148
  return None
202
149
 
203
-
204
-
205
150
  def should_recompute(self, token):
206
-
207
151
  """Check if recomputation is needed based on data freshness"""
208
152
 
209
153
  data = self.get_all()
210
154
 
211
155
  if not data:
212
-
213
156
  return True
214
157
 
215
-
216
-
217
158
  # Check if we have a last_recompute timestamp
218
159
 
219
- last_recompute = data.get('_last_recompute')
160
+ last_recompute = data.get("_last_recompute")
220
161
 
221
162
  if not last_recompute:
222
-
223
163
  return True
224
164
 
225
-
226
-
227
165
  # Only recompute if it's been more than 30 seconds since last recompute
228
166
 
229
167
  # This prevents excessive recomputation while allowing for updates
@@ -231,22 +169,16 @@ class LookupStore:
231
169
  from datetime import datetime, timedelta
232
170
 
233
171
  try:
234
-
235
172
  last_recompute_time = datetime.fromisoformat(last_recompute)
236
173
 
237
174
  return datetime.now() - last_recompute_time > timedelta(seconds=30)
238
175
 
239
176
  except (ValueError, TypeError):
240
-
241
177
  return True
242
178
 
243
-
244
-
245
179
  def mark_recompute_done(self):
246
-
247
180
  """Mark that recomputation has been completed"""
248
181
 
249
182
  from datetime import datetime
250
183
 
251
- self.set('_last_recompute', datetime.now().isoformat())
252
-
184
+ self.set("_last_recompute", datetime.now().isoformat())
@@ -0,0 +1,89 @@
1
+ import logging
2
+ from typing import Any, Tuple, TYPE_CHECKING
3
+ import json
4
+
5
+ from endoreg_db.models.requirement.requirement_error import (
6
+ RequirementEvaluationError,
7
+ )
8
+
9
+ if TYPE_CHECKING:
10
+ from endoreg_db.models.requirement.requirement import Requirement
11
+
12
+ logger = logging.getLogger(__name__)
13
+
14
+
15
+ def safe_evaluate_requirement(
16
+ requirement: "Requirement",
17
+ *args: Any,
18
+ mode: str = "strict",
19
+ **kwargs: Any,
20
+ ) -> Tuple[bool, str, str | None]:
21
+ """
22
+ Wrapper für Requirement.evaluate / evaluate_with_details, der NIE Exceptions durchlässt.
23
+
24
+ Returns:
25
+ met: bool
26
+ details: human-readable explanation (für UI)
27
+ error: technischer Fehlerstring oder None
28
+ """
29
+
30
+ try:
31
+ if hasattr(requirement, "evaluate_with_details"):
32
+ met, details = requirement.evaluate_with_details(*args, mode=mode, **kwargs)
33
+ else:
34
+ met = requirement.evaluate(*args, mode=mode, **kwargs)
35
+ details = "Voraussetzung erfüllt" if met else "Voraussetzung nicht erfüllt"
36
+ error = None
37
+
38
+ except RequirementEvaluationError as e:
39
+ ctx = e.context
40
+ req_obj = ctx.requirement or requirement
41
+
42
+ # sprechbarer Name aus DB (Beschreibung bevorzugen, sonst name)
43
+ display_name = (
44
+ getattr(req_obj, "description", None)
45
+ or getattr(req_obj, "name", None)
46
+ or "unbekannte Voraussetzung"
47
+ )
48
+
49
+ # falls Exception schon eine user_message mitbringt: die nehmen
50
+ if ctx.user_message:
51
+ details = ctx.user_message
52
+ else:
53
+ details = (
54
+ f"Die Voraussetzung „{display_name}“ konnte nicht ausgewertet werden."
55
+ )
56
+
57
+ # technischer Fehlerstring für Logs/Debug
58
+ error = f"{ctx.code}: {ctx.technical_message}"
59
+ logger.warning(
60
+ "Requirement '%s' (code=%s) validation error: %s",
61
+ getattr(req_obj, "name", "unknown"),
62
+ ctx.code,
63
+ ctx.technical_message,
64
+ )
65
+
66
+ met = False
67
+
68
+ except Exception as e:
69
+ met = False
70
+ display_name = getattr(requirement, "description", None) or getattr(
71
+ requirement, "name", "unbekannte Voraussetzung"
72
+ )
73
+ details = (
74
+ f"Bei der Auswertung der Voraussetzung „{display_name}“ ist ein interner Fehler aufgetreten."
75
+ )
76
+ error = f"{e.__class__.__name__}: {e}"
77
+ logger.exception(
78
+ "Requirement '%s' unexpected error",
79
+ getattr(requirement, "name", "unknown"),
80
+ )
81
+
82
+ # normalize details to string
83
+ if not isinstance(details, str):
84
+ try:
85
+ details = json.dumps(details, ensure_ascii=False, default=str)
86
+ except Exception:
87
+ details = str(details)
88
+
89
+ return bool(met), details, error
@@ -1,5 +1,4 @@
1
1
  from .correction import (
2
- VideoMetadataView,
3
2
  VideoProcessingHistoryView,
4
3
  VideoApplyMaskView,
5
4
  VideoRemoveFramesView,
@@ -11,49 +10,49 @@ from ..media.video_media import VideoMediaView
11
10
  from .reimport import (
12
11
  VideoReimportView
13
12
  )
14
-
15
- from .segmentation import (
16
- VideoViewSet,
17
- VideoLabelView,
18
- UpdateLabelSegmentsView,
19
- rerun_segmentation,
20
- )
21
-
22
- # Phase 3.2: VideoStreamView moved to dedicated module
23
13
  from .video_stream import VideoStreamView
14
+ from .video_examination_viewset import VideoExaminationViewSet
15
+ from .video_meta_stats import VideoMetadataStatsView
24
16
 
25
- from .timeline import (
26
- video_timeline_view
27
- )
28
17
 
29
- from .video_examination_viewset import VideoExaminationViewSet
18
+ from .segments_crud import (
19
+ video_segments_collection,
20
+ video_segments_by_video,
21
+ video_segment_detail,
22
+ video_segments_stats,
23
+ video_segment_validate,
24
+ video_segments_validate_bulk,
25
+ video_segments_validation_status,
26
+ )
27
+ from ..ai.label import label_list
30
28
 
31
29
  __all__ = [
32
30
  # Video Correction (Phase 1.1) - Implemented
33
- 'VideoMetadataView',
34
31
  'VideoProcessingHistoryView',
35
32
  'VideoApplyMaskView',
36
33
  'VideoRemoveFramesView',
34
+ 'VideoMetadataStatsView',
37
35
 
38
36
  'VideoMediaView',
39
37
 
40
38
  'VideoCorrectionView',
41
- # 'TaskStatusView',
42
- # 'VideoDownloadProcessedView',
43
39
 
44
40
  # Reimport views
45
41
  'VideoReimportView',
46
42
 
47
43
  # Segmentation views
48
- 'VideoViewSet',
49
44
  'VideoStreamView',
50
- 'VideoLabelView',
51
- 'UpdateLabelSegmentsView',
52
- 'rerun_segmentation',
53
-
54
- # Timeline views
55
- 'video_timeline_view',
56
45
 
57
46
  # Video Examination ViewSet
58
47
  "VideoExaminationViewSet",
48
+
49
+ 'video_segments_collection',
50
+ 'video_segments_by_video',
51
+ 'video_segment_detail',
52
+ 'video_segments_stats',
53
+ 'video_segment_validate',
54
+ 'video_segments_validate_bulk',
55
+ 'video_segments_validation_status',
56
+
57
+ 'label_list',
59
58
  ]