endoreg-db 0.6.0__py3-none-any.whl → 0.6.2__py3-none-any.whl

endoreg_db/data/medication/anticoagulation.yaml

@@ -0,0 +1,65 @@
+- models: endoreg_db.models.medication
+  fields:
+    name: "apixaban"
+    name_de: "Apixaban"
+    name_en: "Apixaban"
+    adapt_to_renal_function: true
+    adapt_to_hepatic_function: true
+    adapt_to_indication: true
+    adapt_to_age: true
+    adapt_to_weight: false
+    adapt_to_risk: true
+    default_unit: "miligram"
+
+- models: endoreg_db.models.medication
+  fields:
+    name: "dabigatran"
+    name_de: "Dabigatran"
+    name_en: "Dabigatran"
+    adapt_to_renal_function: true
+    adapt_to_hepatic_function: true
+    adapt_to_indication: true
+    adapt_to_age: true
+    adapt_to_weight: false
+    adapt_to_risk: true
+    default_unit: "miligram"
+
+- models: endoreg_db.models.medication
+  fields:
+    name: "edoxaban"
+    name_de: "Edoxaban"
+    name_en: "Edoxaban"
+    adapt_to_renal_function: true
+    adapt_to_hepatic_function: true
+    adapt_to_indication: true
+    adapt_to_age: true
+    adapt_to_weight: false
+    adapt_to_risk: true
+    default_unit: "miligram"
+
+- models: endoreg_db.models.medication
+  fields:
+    name: "rivaroxaban"
+    name_de: "Rivaroxaban"
+    name_en: "Rivaroxaban"
+    adapt_to_renal_function: true
+    adapt_to_hepatic_function: true
+    adapt_to_indication: true
+    adapt_to_age: true
+    adapt_to_weight: false
+    adapt_to_risk: true
+    default_unit: "miligram"
+
+- models: endoreg_db.models.medication
+  fields:
+    name: "enoxaparin"
+    name_de: "Enoxaparin"
+    name_en: "Enoxaparin"
+    adapt_to_renal_function: true
+    adapt_to_hepatic_function: false
+    adapt_to_indication: true
+    adapt_to_age: false
+    adapt_to_weight: true
+    adapt_to_risk: true
+    default_unit: "miligram"
+    

endoreg_db/data/medication/tah.yaml

@@ -0,0 +1,70 @@
+# ASS
+- models: endoreg_db.models.medication
+  fields:
+    name: "aspirin"
+    name_de: "Aspririn"
+    name_en: "Aspirin"
+    adapt_to_renal_function: false
+    adapt_to_hepatic_function: false
+    adapt_to_indication: true
+    adapt_to_age: false
+    adapt_to_weight: false
+    adapt_to_risk: false
+    default_unit: "miligram"
+
+# Clopidogrel
+- models: endoreg_db.models.medication
+  fields:
+    name: "clopidogrel"
+    name_de: "Clopidogrel"
+    name_en: "Clopidogrel"
+    adapt_to_renal_function: false
+    adapt_to_hepatic_function: false
+    adapt_to_indication: true
+    adapt_to_age: false
+    adapt_to_weight: false
+    adapt_to_risk: false
+    default_unit: "miligram"
+
+# Prasugrel
+- models: endoreg_db.models.medication
+  fields:
+    name: "prasugrel"
+    name_de: "Prasugrel"
+    name_en: "Prasugrel"
+    adapt_to_renal_function: false
+    adapt_to_hepatic_function: false
+    adapt_to_indication: true
+    adapt_to_age: false
+    adapt_to_weight: false
+    adapt_to_risk: false
+    default_unit: "miligram"
+
+
+# Ticagrelor
+- models: endoreg_db.models.medication
+  fields:
+    name: "ticagrelor"
+    name_de: "Ticagrelor"
+    name_en: "Ticagrelor"
+    adapt_to_renal_function: false
+    adapt_to_hepatic_function: true
+    adapt_to_indication: true
+    adapt_to_age: false
+    adapt_to_weight: false
+    adapt_to_risk: false
+    default_unit: "miligram"
+
+# Tirofiban
+- models: endoreg_db.models.medication
+  fields:
+    name: "tirofiban"
+    name_de: "Tirofiban"
+    name_en: Tirofiban"
+    adapt_to_renal_function: true
+    adapt_to_hepatic_function: true
+    adapt_to_indication: true
+    adapt_to_age: false
+    adapt_to_weight: false
+    adapt_to_risk: false
+    default_unit: "miligram"

endoreg_db/data/medication_indication/anticoagulation.yaml

@@ -0,0 +1,115 @@
+# Quellen: Fachinformationen d. entsprechenden Medikamente
+- model: endoreg_db.medication_indication
+  fields:
+    name: "te_prevention-after_hip-apixaban"
+    events: ["hip_replacement"]
+    diseases: []
+    disease_classification_choices: []
+    medication_schedules: [
+        "apixaban-2.5mg-twice_daily_32d", # min 32d, max 38d
+      ]
+    indication_type: "thromboembolism-prevention-after_hip_replacement"
+    sources: ["fachinformation-apixaban-eliquis_2.5mg-bristol_meyer_squibbs"]
+
+- model: endoreg_db.medication_indication
+  fields:
+    name: "te_prevention-after_knee-apixaban"
+    events: ["knee_replacement"]
+    diseases: []
+    disease_classification_choices: []
+    medication_schedules: [
+        "apixaban-2.5mg-twice_daily_10d", # min 10d, max 14d
+      ]
+    indication_type: "thromboembolism-prevention-after_knee_replacement"
+    sources: ["fachinformation-apixaban-eliquis_2.5mg-bristol_meyer_squibbs"]
+
+- model: endoreg_db.medication_indication
+  fields:
+    name: "te_prevention-non_valvular_af-apixaban"
+    events: []
+    diseases: ["non_valvular_af"]
+    disease_classification_choices: []
+    medication_schedules: [
+        "apixaban-5mg-twice_daily", # no limit
+      ]
+    indication_type: "thromboembolism-prevention-non_valvular_af"
+    sources: ["fachinformation-apixaban-eliquis_2.5mg-bristol_meyer_squibbs"]
+
+# - model: endoreg_db.medication_indication
+#   fields:
+#     name: "te_prevention_non_valvular_af-apixaban-ckd_stage_4"
+#     classification_choices: [
+#       "ckd_4"
+#     ]
+#     medication_schedules: [
+#       "apixaban-2.5mg-twice_daily"
+#     ]
+#     indication_type: "thromboembolism-prevention-non_valvular_af"
+#     sources: [
+#       "fachinformation-apixaban-eliquis_2.5mg-bristol_meyer_squibbs"
+#     ]
+
+# generally same as ckd4 above but technically different definition
+# Applies for example when risk factors (2 of three: age >= 80; KG <= 60 kg; Kreatinin >= 1.5 mg/dl)
+- model: endoreg_db.medication_indication
+  fields:
+    name: "te_prevention-non_valvular_af-apixaban-dr" #dr = dose reduction
+    events: []
+    diseases: ["non_valvular_af"]
+    disease_classification_choices: []
+    medication_schedules: [
+        "apixaban-2.5mg-twice_daily", # no limit
+      ]
+    indication_type: "thromboembolism-prevention-non_valvular_af"
+    sources: ["fachinformation-apixaban-eliquis_2.5mg-bristol_meyer_squibbs"]
+
+- model: endoreg_db.medication_indication
+  fields:
+    name: "dvt_treatment-apixaban-3mo"
+    events: ["deep_vein_thrombosis"]
+    diseases: []
+    disease_classification_choices: []
+    medication_schedules: [
+        "apixaban-5g-twice_daily_7d", # first 7d of treatment 10 mg twice daily
+        "apixaban-5g-twice_daily_3mo", # no limit
+      ]
+    indication_type: "deep_vein_thrombosis-treatment"
+    sources: ["fachinformation-apixaban-eliquis_2.5mg-bristol_meyer_squibbs"]
+
+- model: endoreg_db.medication_indication
+  fields:
+    name: "pe_treatment-apixaban-3mo"
+    events: ["pulmonary_embolism"]
+    diseases: []
+    disease_classification_choices: []
+    medication_schedules: [
+        "apixaban-5g-twice_daily_7d", # first 7d of treatment 10 mg twice daily
+        "apixaban-5g-twice_daily_3mo", # no limit
+      ]
+    indication_type: "pulmonary_embolism-treatment"
+    sources: ["fachinformation-apixaban-eliquis_2.5mg-bristol_meyer_squibbs"]
+
+- model: endoreg_db.medication_indication
+  fields:
+    name: "pe_treatment-apixaban-6mo"
+    events: ["pulmonary_embolism"]
+    diseases: []
+    disease_classification_choices: []
+    medication_schedules: [
+        "apixaban-5g-twice_daily_7d", # first 7d of treatment 10 mg twice daily
+        "apixaban-5g-twice_daily_6mo", # no limit
+      ]
+    indication_type: "pulmonary_embolism-treatment"
+    sources: ["fachinformation-apixaban-eliquis_2.5mg-bristol_meyer_squibbs"]
+
+- model: endoreg_db.medication_indication
+  fields:
+    name: "te_prevention-recurrent-te-apixaban"
+    events: ["recurrent_thrombembolism"]
+    diseases: []
+    disease_classification_choices: []
+    medication_schedules: ["apixaban-2.5mg-twice_daily"]
+    indication_type: "thrombembolism-prevention-recurrent_thrombembolism"
+    sources: ["fachinformation-apixaban-eliquis_2.5mg-bristol_meyer_squibbs"]
+# templates to create:
+# medication_schedules:

endoreg_db/data/medication_indication_type/data.yaml

@@ -0,0 +1,11 @@
+- model: endoreg_db.medication_indication_type
+  fields:
+    name: "event"
+    name_de: "Ereignis"
+    name_en: "event"
+
+- model: endoreg_db.medication_indication_type
+  fields:
+    name: "disease"
+    name_de: "Krankheit"
+    name_en: "disease"

endoreg_db/data/medication_indication_type/thrombembolism.yaml

@@ -0,0 +1,41 @@
+- model: endoreg_db.medication_indication_type
+  fields:
+    name: "thromboembolism-prevention-after_hip_replacement"
+    name_de: "Thromboembolie-Prophylaxe nach Hüft-TEP"
+    name_en: "Thromboembolism Prevention after Hip Replacement"
+
+- model: endoreg_db.medication_indication_type
+  fields:
+    name: "thromboembolism-prevention-after_knee_replacement"
+    name_de: "Thromboembolie-Prophylaxe nach Knie-TEP"
+    name_en: "Thromboembolism Prevention after Knee Replacement"
+
+- model: endoreg_db.medication_indication_type
+  fields:
+    name: "thromboembolism-prevention-non_valvular_af"
+    name_de: "Thromboembolie-Prophylaxe bei nicht-valvulärem Vorhofflimmern"
+    name_en: "Thromboembolism Prevention in Non-Valvular Atrial Fibrillation"
+
+- model: endoreg_db.medication_indication_type
+  fields:
+    name: "thromboembolism-prevention-recurrent_thrombembolism"
+    name_de: "Thromboembolie-Prophylaxe bei rezidivierenden Thrombembolien"
+    name_en: "Thromboembolism Prevention in Recurrent Thrombembolism"
+
+- model: endoreg_db.medication_indication_type
+  fields:
+    name: "deep_vein_thrombosis-treatment"
+    name_de: "Thrombose-Behandlung bei tiefer Beinvenenthrombose"
+    name_en: "Deep Vein Thrombosis Treatment"
+
+- model: endoreg_db.medication_indication_type
+  fields:
+    name: "pulmonary_embolism-treatment"
+    name_de: "Thrombose-Behandlung bei Lungenembolie"
+    name_en: "Pulmonary Embolism Treatment"
+
+- model: endoreg_db.medication_indication_type
+  fields:
+    name: "thrombembolism-prevention-recurrent_thrombembolism"
+    name_de: "Thromboembolie-Prophylaxe bei rezidivierenden Thrombembolien"
+    name_en: "Thromboembolism Prevention in Recurrent Thrombembolism"

endoreg_db/data/medication_intake_time/base.yaml

@@ -0,0 +1,31 @@
+- model: medication_intake_time
+  fields:
+    name: "daily-morning"
+    name_de: "täglich, morgens"
+    name_en: "daily, morning"
+    repeats: "daily"
+    time: "07:00:00"
+
+- model: medication_intake_time
+  fields:
+    name: "daily-evening"
+    name_de: "täglich, abends"
+    name_en: "daily, evening"
+    repeats: "daily"
+    time: "19:00:00"
+
+- model: medication_intake_time
+  fields:
+    name: "daily-noon"
+    name_de: "täglich, mittags"
+    name_en: "daily, noon"
+    repeats: "daily"
+    time: "13:00:00"
+
+- model: medication_intake_time
+  fields:
+    name: "daily-night"
+    name_de: "täglich, nachts"
+    name_en: "daily, night"
+    repeats: "daily"
+    time: "01:00:00"

endoreg_db/data/medication_schedule/apixaban.yaml

@@ -0,0 +1,95 @@
+- model: endoreg_db.medication_schedule
+  fields:
+    name: "apixaban-2.5mg-twice_daily_32d"
+    name_de: "Apixaban 2.5mg, 2x täglich, 32 Tage"
+    name_en: "Apixaban 2.5mg, twice daily, 32 days"
+    therapy_duration_d: 32
+    medication: "apixaban"
+    dose: 2.5
+    unit: "miligram"
+    intake_times: [
+      "daily-morning",
+      "daily-evening"
+    ]
+
+- model: endoreg_db.medication_schedule
+  fields:
+    name: "apixaban-2.5mg-twice_daily_10d"
+    name_de: "Apixaban 2.5mg, 2x täglich, 10 Tage"
+    name_en: "Apixaban 2.5mg, twice daily, 10 days"
+    therapy_duration_d: 10
+    medication: "apixaban"
+    dose: 2.5
+    unit: "miligram"
+    intake_times: [
+      "daily-morning",
+      "daily-evening"
+    ]
+
+- model: endoreg_db.medication_schedule
+  fields:
+    name: "apixaban-5mg-twice_daily"
+    name_de: "Apixaban 5mg, 2x täglich"
+    name_en: "Apixaban 5mg, twice daily"
+    medication: "apixaban"
+    dose: 5
+    unit: "miligram"
+    intake_times: [
+      "daily-morning",
+      "daily-evening"
+    ]
+
+- model: endoreg_db.medication_schedule
+  fields:
+    name: "apixaban-2.5mg-twice_daily"
+    name_de: "Apixaban 2.5mg, 2x täglich"
+    name_en: "Apixaban 2.5mg, twice daily"
+    medication: "apixaban"
+    dose: 2.5
+    unit: "miligram"
+    intake_times: [
+      "daily-morning",
+      "daily-evening"
+    ]
+
+- model: endoreg_db.medication_schedule
+  fields:
+    name: "apixaban-5g-twice_daily_7d"
+    name_de: "Apixaban 5g, 2x täglich, 7 Tage"
+    name_en: "Apixaban 5g, twice daily, 7 days"
+    therapy_duration_d: 7
+    medication: "apixaban"
+    dose: 5
+    unit: "miligram"
+    intake_times: [
+      "daily-morning",
+      "daily-evening"
+    ]
+
+- model: endoreg_db.medication_schedule
+  fields:
+    name: "apixaban-5g-twice_daily_3mo"
+    name_de: "Apixaban 5g, 2x täglich, 3 Monate"
+    name_en: "Apixaban 5g, twice daily, 3 months"
+    therapy_duration_d: 90
+    medication: "apixaban"
+    dose: 5
+    unit: "miligram"
+    intake_times: [
+      "daily-morning",
+      "daily-evening"
+    ]
+
+- model: endoreg_db.medication_schedule
+  fields:
+    name: "apixaban-5g-twice_daily_6mo"
+    name_de: "Apixaban 5g, 2x täglich, 6 Monate"
+    name_en: "Apixaban 5g, twice daily, 6 months"
+    therapy_duration_d: 180
+    medication: "apixaban"
+    dose: 5
+    unit: "miligram"
+    intake_times: [
+      "daily-morning",
+      "daily-evening"
+    ]

endoreg_db/data/medication_schedule/ass.yaml

@@ -0,0 +1,12 @@
+- model: endoreg_db.medication_schedule
+  fields:
+    name: "ass-100mg-once_daily"
+    name_de: "ASS 100mg, 1x täglich"
+    name_en: "ASS 100mg, once daily"
+    therapy_duration_d: -1
+    medication: "aspirin"
+    dose: 100
+    unit: "miligram"
+    intake_times: [
+      "daily-morning",
+    ]

endoreg_db/data/medication_schedule/enoxaparin.yaml

@@ -0,0 +1,26 @@
+- model: endoreg_db.medication_schedule
+  fields:
+    name: "enoxaparin-80mg-twice_daily"
+    name_de: "Enoxaparin 80mg, 2x täglich"
+    name_en: "Enoxaparin 80mg, twice daily"
+    therapy_duration_d: -1
+    medication: "enoxaparin"
+    dose: 80
+    unit: "miligram"
+    intake_times: [
+      "daily-morning",
+      "daily-evening"
+    ]
+
+- model: endoreg_db.medication_schedule
+  fields:
+    name: "enoxaparin-40mg-one_daily"
+    name_de: "Enoxaparin 80mg, 1x täglich"
+    name_en: "Enoxaparin 80mg, once daily"
+    therapy_duration_d: -1
+    medication: "enoxaparin"
+    dose: 40
+    unit: "miligram"
+    intake_times: [
+      "daily-morning"
+    ]

endoreg_db/data/names_first/first_names.yaml

@@ -0,0 +1,51 @@
+- model: endoreg_db.first_name
+  fields:
+    name: Alexander
+- model: endoreg_db.first_name
+  fields:
+    name: Angelika
+- model: endoreg_db.first_name
+  fields:
+    name: Anja
+- model: endoreg_db.first_name
+  fields:
+    name: Doro
+- model: endoreg_db.first_name
+  fields:
+    name: Dorothea
+- model: endoreg_db.first_name
+  fields:
+    name: Florian
+- model: endoreg_db.first_name
+  fields:
+    name: Hans
+- model: endoreg_db.first_name
+  fields:
+    name: Kathrin
+- model: endoreg_db.first_name
+  fields:
+    name: Laura
+- model: endoreg_db.first_name
+  fields:
+    name: Linhel
+- model: endoreg_db.first_name
+  fields:
+    name: Mandy
+- model: endoreg_db.first_name
+  fields:
+    name: Markus
+- model: endoreg_db.first_name
+  fields:
+    name: Philip
+- model: endoreg_db.first_name
+  fields:
+    name: Rainer
+- model: endoreg_db.first_name
+  fields:
+    name: Sven
+- model: endoreg_db.first_name
+  fields:
+    name: Tanja
+- model: endoreg_db.first_name
+  fields:
+    name: Theodor

endoreg_db/data/names_last/last_names.yaml

@@ -0,0 +1,51 @@
+- model: endoreg_db.last_name
+  fields:
+    name: Brand
+- model: endoreg_db.last_name
+  fields:
+    name: Dela Cruz
+- model: endoreg_db.last_name
+  fields:
+    name: Hann
+- model: endoreg_db.last_name
+  fields:
+    name: Henniger
+- model: endoreg_db.last_name
+  fields:
+    name: Hose
+- model: endoreg_db.last_name
+  fields:
+    name: Hossner
+- model: endoreg_db.last_name
+  fields:
+    name: Kozielski
+- model: endoreg_db.last_name
+  fields:
+    name: Kudlich
+- model: endoreg_db.last_name
+  fields:
+    name: Lux
+- model: endoreg_db.last_name
+  fields:
+    name: Meining
+- model: endoreg_db.last_name
+  fields:
+    name: Purrer
+- model: endoreg_db.last_name
+  fields:
+    name: Reiter
+- model: endoreg_db.last_name
+  fields:
+    name: Retzbach
+- model: endoreg_db.last_name
+  fields:
+    name: Sodmann
+- model: endoreg_db.last_name
+  fields:
+    name: Weich
+- model: endoreg_db.last_name
+  fields:
+    name: Wiese
+- model: endoreg_db.last_name
+  fields:
+    name: Wiesemann

endoreg_db/data/network_device/data.yaml

@@ -0,0 +1,59 @@
+- model: endoreg_db.network_device
+  fields:
+    name: "agl-server-01"
+    device_type: "agl-server"
+    ip: "172.16.255.1"
+
+- model: endoreg_db.network_device
+  fields:
+    name: "agl-server-02"
+    device_type: "agl-server"
+    ip: "172.16.255.2"
+
+- model: endoreg_db.network_device
+  fields:
+    name: "agl-server-03"
+    device_type: "agl-server"
+    ip: "172.16.255.3"
+
+- model: endoreg_db.network_device
+  fields:
+    name: "agl-server-04"
+    device_type: "agl-server"
+    ip: "172.16.255.4"
+
+- model: endoreg_db.network_device
+  fields:
+    name: "agl-gpu-client-01"
+    device_type: "agl-server"
+    ip: "172.16.255.141"
+
+- model: endoreg_db.network_device
+  fields:
+    name: "agl-gpu-client-02"
+    device_type: "agl-server"
+    ip: "172.16.255.142"
+
+- model: endoreg_db.network_device
+  fields:
+    name: "agl-gpu-client-03"
+    device_type: "agl-server"
+    ip: "172.16.255.143"
+
+- model: endoreg_db.network_device
+  fields:
+    name: "agl-gpu-client-04"
+    device_type: "agl-server"
+    ip: "172.16.255.144"
+
+- model: endoreg_db.network_device
+  fields:
+    name: "agl-gpu-client-05"
+    device_type: "agl-server"
+    ip: "172.16.255.145"
+
+- model: endoreg_db.network_device
+  fields:
+    name: "agl-gpu-client-dev"
+    device_type: "agl-gpu-client"
+    ip: "172.16.255.140"

endoreg_db/data/network_device_type/data.yaml

@@ -0,0 +1,12 @@
+- model: endoreg_db.network_device_type
+  fields:
+    name: "agl-server"
+
+
+- model: endoreg_db.network_device_type
+  fields:
+    name: "coloreg-client"
+
+- model: endoreg_db.network_device_type
+  fields:
+    name: "agl-gpu-client"

endoreg_db/data/organ/data.yaml

@@ -0,0 +1,29 @@
+- model: endoreg_db.organ
+  fields:
+    name: "colon"
+    name_de: "Kolon"
+    name_en: "Colon"
+  
+- model: endoreg_db.organ
+  fields:
+    name: "rectum"
+    name_de: "Rektum"
+    name_en: "Rectum"
+
+- model: endoreg_db.organ
+  fields:
+    name: "anal_canal"
+    name_de: "Analkanal"
+    name_en: "Anal Canal"
+
+- model: endoreg_db.organ
+  fields:
+    name: "ileum"
+    name_de: "Ileum"
+    name_en: "Ileum"
+
+- model: endoreg_db.organ
+  fields:
+    name: "small_bowel"
+    name_de: "Dünndarm"
+    name_en: "Small Bowel"

endoreg_db/data/patient_lab_sample_type/generic.yaml

@@ -0,0 +1,6 @@
+- model: endoreg_db.patient_lab_sample_type
+  fields:
+    name: "generic"
+    name_de: "generisch"
+    name_en: "generic"
+    description: "Generische Laborprobe"