eegdash 0.0.1__py3-none-any.whl

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  1. eegdash/SignalStore/__init__.py +0 -0
  2. eegdash/SignalStore/signalstore/__init__.py +3 -0
  3. eegdash/SignalStore/signalstore/adapters/read_adapters/abstract_read_adapter.py +13 -0
  4. eegdash/SignalStore/signalstore/adapters/read_adapters/domain_modeling/schema_read_adapter.py +16 -0
  5. eegdash/SignalStore/signalstore/adapters/read_adapters/domain_modeling/vocabulary_read_adapter.py +19 -0
  6. eegdash/SignalStore/signalstore/adapters/read_adapters/handmade_records/excel_study_organizer_read_adapter.py +114 -0
  7. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/axona/axona_read_adapter.py +912 -0
  8. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/ReadIntanSpikeFile.py +140 -0
  9. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/intan_read_adapter.py +29 -0
  10. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/__init__.py +0 -0
  11. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/data_to_result.py +62 -0
  12. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/get_bytes_per_data_block.py +36 -0
  13. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/notch_filter.py +50 -0
  14. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/qstring.py +41 -0
  15. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/read_header.py +135 -0
  16. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/read_one_data_block.py +45 -0
  17. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/load_intan_rhd_format.py +204 -0
  18. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/__init__.py +0 -0
  19. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/data_to_result.py +60 -0
  20. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/get_bytes_per_data_block.py +37 -0
  21. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/notch_filter.py +50 -0
  22. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/qstring.py +41 -0
  23. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/read_header.py +153 -0
  24. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/read_one_data_block.py +47 -0
  25. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/load_intan_rhs_format.py +213 -0
  26. eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/neurodata_without_borders/neurodata_without_borders_read_adapter.py +14 -0
  27. eegdash/SignalStore/signalstore/operations/__init__.py +4 -0
  28. eegdash/SignalStore/signalstore/operations/handler_executor.py +22 -0
  29. eegdash/SignalStore/signalstore/operations/handler_factory.py +41 -0
  30. eegdash/SignalStore/signalstore/operations/handlers/base_handler.py +44 -0
  31. eegdash/SignalStore/signalstore/operations/handlers/domain/property_model_handlers.py +79 -0
  32. eegdash/SignalStore/signalstore/operations/handlers/domain/schema_handlers.py +3 -0
  33. eegdash/SignalStore/signalstore/operations/helpers/abstract_helper.py +17 -0
  34. eegdash/SignalStore/signalstore/operations/helpers/neuroscikit_extractor.py +33 -0
  35. eegdash/SignalStore/signalstore/operations/helpers/neuroscikit_rawio.py +165 -0
  36. eegdash/SignalStore/signalstore/operations/helpers/spikeinterface_helper.py +100 -0
  37. eegdash/SignalStore/signalstore/operations/helpers/wrappers/neo_wrappers.py +21 -0
  38. eegdash/SignalStore/signalstore/operations/helpers/wrappers/nwb_wrappers.py +27 -0
  39. eegdash/SignalStore/signalstore/store/__init__.py +8 -0
  40. eegdash/SignalStore/signalstore/store/data_access_objects.py +1181 -0
  41. eegdash/SignalStore/signalstore/store/datafile_adapters.py +131 -0
  42. eegdash/SignalStore/signalstore/store/repositories.py +928 -0
  43. eegdash/SignalStore/signalstore/store/store_errors.py +68 -0
  44. eegdash/SignalStore/signalstore/store/unit_of_work.py +97 -0
  45. eegdash/SignalStore/signalstore/store/unit_of_work_provider.py +67 -0
  46. eegdash/SignalStore/signalstore/utilities/data_adapters/spike_interface_adapters/si_recording.py +1 -0
  47. eegdash/SignalStore/signalstore/utilities/data_adapters/spike_interface_adapters/si_sorter.py +1 -0
  48. eegdash/SignalStore/signalstore/utilities/testing/data_mocks.py +513 -0
  49. eegdash/SignalStore/signalstore/utilities/tools/dataarrays.py +49 -0
  50. eegdash/SignalStore/signalstore/utilities/tools/mongo_records.py +25 -0
  51. eegdash/SignalStore/signalstore/utilities/tools/operation_response.py +78 -0
  52. eegdash/SignalStore/signalstore/utilities/tools/purge_orchestration_response.py +21 -0
  53. eegdash/SignalStore/signalstore/utilities/tools/quantities.py +15 -0
  54. eegdash/SignalStore/signalstore/utilities/tools/strings.py +38 -0
  55. eegdash/SignalStore/signalstore/utilities/tools/time.py +17 -0
  56. eegdash/SignalStore/tests/conftest.py +799 -0
  57. eegdash/SignalStore/tests/data/valid_data/data_arrays/make_fake_data.py +59 -0
  58. eegdash/SignalStore/tests/unit/store/conftest.py +0 -0
  59. eegdash/SignalStore/tests/unit/store/test_data_access_objects.py +1235 -0
  60. eegdash/SignalStore/tests/unit/store/test_repositories.py +1309 -0
  61. eegdash/SignalStore/tests/unit/store/test_unit_of_work.py +7 -0
  62. eegdash/SignalStore/tests/unit/test_ci_cd.py +8 -0
  63. eegdash/__init__.py +1 -0
  64. eegdash/aws_ingest.py +29 -0
  65. eegdash/data_utils.py +213 -0
  66. eegdash/main.py +17 -0
  67. eegdash/signalstore_data_utils.py +280 -0
  68. eegdash-0.0.1.dist-info/LICENSE +20 -0
  69. eegdash-0.0.1.dist-info/METADATA +72 -0
  70. eegdash-0.0.1.dist-info/RECORD +72 -0
  71. eegdash-0.0.1.dist-info/WHEEL +5 -0
  72. eegdash-0.0.1.dist-info/top_level.txt +1 -0
eegdash-0.0.1.dist-info/RECORD ADDED
@@ -0,0 +1,72 @@
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+ eegdash/__init__.py,sha256=hgxE8COvPu3EV2Tq3GqtMk68fsd7bYvOs_0GO6rrzfk,32
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+ eegdash/aws_ingest.py,sha256=imXA9rvFm49-pSmMaq6RT37k9USfTLAhOgu4WrDdlBc,1045
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+ eegdash/data_utils.py,sha256=0nF6JaQrkBaxS2zVPjkeUMcWVbh1eigG-nZYPYfBJ38,8927
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+ eegdash/main.py,sha256=ANyrsVCvDiKNiQAmlQt9FcyOeCoD4Oe6Gq25LM2o38o,675
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+ eegdash/signalstore_data_utils.py,sha256=YffTIAm5KBBFpl99aEAWTaDPZpBt2ghrBqlTTrrNh8I,10760
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+ eegdash/SignalStore/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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+ eegdash/SignalStore/signalstore/__init__.py,sha256=vejaZm3K4LxIgyXxhrT1C4ZNY6BgmmRhYdHOF84kdkk,124
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/abstract_read_adapter.py,sha256=ktrVx_oJ08FmuvxTatkJ0rUmb5l66gLhWzi9zBMt4Kg,317
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/domain_modeling/schema_read_adapter.py,sha256=HRBaVTLoRajjDRmFCBuAW6KX1tSLgRW6amCyrV9--Ko,497
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/domain_modeling/vocabulary_read_adapter.py,sha256=LRa2s6mssWZsw9Dk4PKNy8QYJu7Z-jjkUfLIDxBqpCs,691
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/handmade_records/excel_study_organizer_read_adapter.py,sha256=-dYuGZ297ZpozwX2wE9bmOyEUT_w-6jBiI5JE32OpdA,4351
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/axona/axona_read_adapter.py,sha256=IMY9x66SgE-SzsWJ6ca2A_CcrMIrsgQ--bl80vb0rUU,33850
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/ReadIntanSpikeFile.py,sha256=knuR9RjHWcwcPKYxDt6sclUSjJG8cmeyPQumghC8ubs,5061
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/intan_read_adapter.py,sha256=T9KTVdtlNgDg4ffX8SRDb00GJxRWcqWoy77iRdMAQzo,1044
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/load_intan_rhd_format.py,sha256=zK2vsrKvjLc0z562zBeQF5IaRGN-a6zz1rn2aAi7ltk,10166
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/data_to_result.py,sha256=O8rgWMzBKSBdj-qt9wzr3kCgFYHdAo7If96iXZfXhX4,2649
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/get_bytes_per_data_block.py,sha256=bivIog0luN9iyY2dLEW7l6KxBd9oHzvLy0Nhl4mrUd4,1607
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/notch_filter.py,sha256=sSRDQtmaGrZUF8_7nyMnAESbbPRFi_nLsyxX3Sn0jVU,1417
20
+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/qstring.py,sha256=IC_-R-fSQX7XVKHZPteS3sGtC-cISy0CeuBhHZDjv6o,995
21
+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/read_header.py,sha256=4-zZvYeiD8CEz2XCKixMlucw7CF1zt_ba8BChMEPSa8,6591
22
+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhd_format/intanutil/read_one_data_block.py,sha256=3EWCnyWN4dop-8D4VqllSy92s9CYyv4CUzUWbPz1ODk,3604
23
+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/load_intan_rhs_format.py,sha256=uTffoEfY4PbDGmoAgJtjk5-cLIybAp0A99KFSFM662A,10868
24
+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/data_to_result.py,sha256=m1tMeDtkl3vrhzDtTyBupEq31apPgHZHqPAio10rgH8,2475
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/get_bytes_per_data_block.py,sha256=lrz360FqFDctvTQClt8TDZ3BE4r6P_o2RB-fs5c2kKM,1374
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/notch_filter.py,sha256=sSRDQtmaGrZUF8_7nyMnAESbbPRFi_nLsyxX3Sn0jVU,1417
28
+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/qstring.py,sha256=zHCsxlWZvOK9c9tWltMHSnL8a-aAJAOuLrwtmGiGT6g,991
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/read_header.py,sha256=2CDcC8j07R-5I3UkLIqT6-JKHAFByaQj-tHxuMXi3WY,7523
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/intan/load_intan_rhs_format/intanutil/read_one_data_block.py,sha256=OmTCVwUsQh1t-QZE3oDv7rpWzahtGtdTmlcI_rFlkrk,2499
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+ eegdash/SignalStore/signalstore/adapters/read_adapters/recording_acquisitions/neurodata_without_borders/neurodata_without_borders_read_adapter.py,sha256=lzOMKfwKIiIaiJb5zNzhtlcWLHvOQ6yaPtu2j8Bfoq4,475
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+ eegdash/SignalStore/signalstore/operations/__init__.py,sha256=AMPuZfqN16WexHAS9qxAH5HGKXR5B0jlMFz6M0Deyxk,222
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+ eegdash/SignalStore/signalstore/operations/handler_executor.py,sha256=lwyDFmIck_fWpEr729bmeMVR0DkTg0wBU_RD31K9jmc,695
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+ eegdash/SignalStore/signalstore/operations/handler_factory.py,sha256=UEXZfVgEALmveN5x0YW1a2icIcNlxYBfuZU4HzR4WAk,1867
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+ eegdash/SignalStore/signalstore/operations/handlers/base_handler.py,sha256=ORgr3TOZsXvGBXpk0O-Aj_CWErW9pGVfsXQZf3f-A34,1538
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+ eegdash/SignalStore/signalstore/operations/handlers/domain/property_model_handlers.py,sha256=JvCMoBTV_ahe--xZ2vsGMf0FnK4g009Q_RWrJU4yLVI,2836
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+ eegdash/SignalStore/signalstore/operations/handlers/domain/schema_handlers.py,sha256=Muolz87jNkOH4KmQ_ykFYLaHTSogeW4wtyzmjyE7Iis,100
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+ eegdash/SignalStore/signalstore/operations/helpers/abstract_helper.py,sha256=OPrnroapxGJXKl2aFOhsy1YMdi79hvb8hLD-kYGMJYk,503
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+ eegdash/SignalStore/signalstore/operations/helpers/neuroscikit_extractor.py,sha256=NN8os2H5JDopV_al4R8zAaXcRwNTYh0S4ht8krS1pOc,1533
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+ eegdash/SignalStore/signalstore/operations/helpers/neuroscikit_rawio.py,sha256=-3EAuIA9N8s6tLchgd5Da7izO555cU1RYwFgDvwK4O8,7056
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+ eegdash/SignalStore/signalstore/operations/helpers/spikeinterface_helper.py,sha256=TVY6QTyexgpJX2tAn-fjEFxedoKgQRSCiTpQUteltGs,3671
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+ eegdash/SignalStore/signalstore/operations/helpers/wrappers/neo_wrappers.py,sha256=BYlyVxoHXDfaqswT7BEjyRwKmEdq1CAPiL3ZwjfDul0,912
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+ eegdash/SignalStore/signalstore/operations/helpers/wrappers/nwb_wrappers.py,sha256=cx08mIK_JOOyGJdG3fUMwfFsbexHl_uptBy0mGtbYxA,640
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+ eegdash/SignalStore/signalstore/store/__init__.py,sha256=F40V_BqwUi8VsyLwMl_M8lvn_P9agBWhwSs_sQtQI1I,324
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+ eegdash/SignalStore/signalstore/store/data_access_objects.py,sha256=gR6-2oVIvPLR2pHikKCSgGOaLARnb4SpuMIIFopl00M,52892
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+ eegdash/SignalStore/signalstore/store/datafile_adapters.py,sha256=ME63tq1LmcvKs4nYVD_EEomWZ9e9YPk7lAphXGFtLco,4097
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+ eegdash/SignalStore/signalstore/store/repositories.py,sha256=8hsTtEmcJ5UwwySsmnBQCLiPuAHYCS2pIC3HQaGvbU8,37670
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+ eegdash/SignalStore/signalstore/store/store_errors.py,sha256=rOD0xG88PwqU8Itz2FOUPhFiJ0ZSp_CNk2kP42qx-nw,1237
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+ eegdash/SignalStore/signalstore/store/unit_of_work.py,sha256=8k6T3QBuSXCsI-RfCNHeKEzhHabR5h-Ld3eRhb1l49I,2674
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+ eegdash/SignalStore/signalstore/store/unit_of_work_provider.py,sha256=qMfCTWYKpHYdktCH6x8Qh7lzRgBWWLTexOod_s-ta28,2450
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+ eegdash/SignalStore/signalstore/utilities/data_adapters/spike_interface_adapters/si_recording.py,sha256=zl6YmW0iJktqayu-AjMn84HDbOcy8T8cLVsVR8BY1as,68
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+ eegdash/SignalStore/signalstore/utilities/data_adapters/spike_interface_adapters/si_sorter.py,sha256=mSvIwWVy2ergSU292NmHpLJoZhgMtAdfg17IEN2vuXk,45
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+ eegdash/SignalStore/signalstore/utilities/testing/data_mocks.py,sha256=Xcd5PFi_tOemQ4fs19vz09D7h0z84xGjKzlXFX4E6Gs,17321
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+ eegdash/SignalStore/signalstore/utilities/tools/dataarrays.py,sha256=RcmQ2RYP0SHl17ZI6M8Fyei5I3FoqElVrgmALDIMiTw,2094
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+ eegdash/SignalStore/signalstore/utilities/tools/mongo_records.py,sha256=X2CrZHP3lRGGyk4s6WuaupqPM2RJ37EcNrX_up_pGz0,832
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+ eegdash/SignalStore/signalstore/utilities/tools/operation_response.py,sha256=XyXCnGwj6bwAFQf-NzPiGZ21FqZUUCiQlfL8pXsGicM,2941
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+ eegdash/SignalStore/signalstore/utilities/tools/purge_orchestration_response.py,sha256=brau-iQrlfaCKBYYnDwA4aiDEamb0KPDC65qvMKgjvg,572
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+ eegdash/SignalStore/signalstore/utilities/tools/quantities.py,sha256=1GgfhjxLQih00cQ8z8_YWRu3BByES18hU7N87hax9Ns,235
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+ eegdash/SignalStore/signalstore/utilities/tools/strings.py,sha256=dS4A5maOiY5pjpqf6wgCL6KW2o19NxB9d6CfK-iWjug,1695
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+ eegdash/SignalStore/signalstore/utilities/tools/time.py,sha256=66RCq7rT_ZJWuNR9pzFYA0Atddpj4_4J3ZziCDeCWWM,636
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+ eegdash/SignalStore/tests/conftest.py,sha256=Q1A-6TvkIe7ROXr2KbNHbuYtPKU29Gprn34Jr4E9ARk,30846
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+ eegdash/SignalStore/tests/data/valid_data/data_arrays/make_fake_data.py,sha256=S6C3q1Cvz2Uvqudt6IJcYrNU0DZaM63DF4STgVzAeEo,1967
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+ eegdash/SignalStore/tests/unit/test_ci_cd.py,sha256=Z_6BIsy4WCfxbQ_vp4onMhTAgkME1z_O4OP2gxpuI-c,119
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+ eegdash/SignalStore/tests/unit/store/conftest.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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+ eegdash/SignalStore/tests/unit/store/test_data_access_objects.py,sha256=hGzcGmaNDL__OuFXX5PpN_TvcE4pOaea7MM0KCkvTks,89927
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+ eegdash/SignalStore/tests/unit/store/test_repositories.py,sha256=xDSgWvleL_V2K6sDMug_Cj0y3SQOFji-kEasc1iXuj0,79389
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+ eegdash/SignalStore/tests/unit/store/test_unit_of_work.py,sha256=S4bzDce5BYfavYT1Z-rdUvMFCe95UYZXZm-ZR2SNpCw,120
68
+ eegdash-0.0.1.dist-info/LICENSE,sha256=Xafu48R-h_kyaNj2tuhfgdEv9_ovciktjUEgRRwMZ6w,812
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+ eegdash-0.0.1.dist-info/METADATA,sha256=SZwuPGkCB1q4fiTz7Mh1K5jzKrK4BIkvQZezsHuo9fU,5987
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+ eegdash-0.0.1.dist-info/WHEEL,sha256=OVMc5UfuAQiSplgO0_WdW7vXVGAt9Hdd6qtN4HotdyA,91
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+ eegdash-0.0.1.dist-info/top_level.txt,sha256=zavO69HQ6MyZM0aQMR2zUS6TAFc7bnN5GEpDpOpFZzU,8
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+ eegdash-0.0.1.dist-info/RECORD,,
eegdash-0.0.1.dist-info/WHEEL ADDED
@@ -0,0 +1,5 @@
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+ Wheel-Version: 1.0
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+ Generator: setuptools (75.2.0)
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+ Root-Is-Purelib: true
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+ Tag: py3-none-any
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+
eegdash-0.0.1.dist-info/top_level.txt ADDED
@@ -0,0 +1 @@
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+ eegdash