edsl 0.1.39.dev1__py3-none-any.whl → 0.1.39.dev3__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (256) hide show
  1. edsl/Base.py +332 -332
  2. edsl/BaseDiff.py +260 -260
  3. edsl/TemplateLoader.py +24 -24
  4. edsl/__init__.py +49 -49
  5. edsl/__version__.py +1 -1
  6. edsl/agents/Agent.py +867 -867
  7. edsl/agents/AgentList.py +413 -413
  8. edsl/agents/Invigilator.py +233 -233
  9. edsl/agents/InvigilatorBase.py +270 -265
  10. edsl/agents/PromptConstructor.py +354 -354
  11. edsl/agents/__init__.py +3 -3
  12. edsl/agents/descriptors.py +99 -99
  13. edsl/agents/prompt_helpers.py +129 -129
  14. edsl/auto/AutoStudy.py +117 -117
  15. edsl/auto/StageBase.py +230 -230
  16. edsl/auto/StageGenerateSurvey.py +178 -178
  17. edsl/auto/StageLabelQuestions.py +125 -125
  18. edsl/auto/StagePersona.py +61 -61
  19. edsl/auto/StagePersonaDimensionValueRanges.py +88 -88
  20. edsl/auto/StagePersonaDimensionValues.py +74 -74
  21. edsl/auto/StagePersonaDimensions.py +69 -69
  22. edsl/auto/StageQuestions.py +73 -73
  23. edsl/auto/SurveyCreatorPipeline.py +21 -21
  24. edsl/auto/utilities.py +224 -224
  25. edsl/base/Base.py +279 -279
  26. edsl/config.py +157 -157
  27. edsl/conversation/Conversation.py +290 -290
  28. edsl/conversation/car_buying.py +58 -58
  29. edsl/conversation/chips.py +95 -95
  30. edsl/conversation/mug_negotiation.py +81 -81
  31. edsl/conversation/next_speaker_utilities.py +93 -93
  32. edsl/coop/PriceFetcher.py +54 -54
  33. edsl/coop/__init__.py +2 -2
  34. edsl/coop/coop.py +1028 -1028
  35. edsl/coop/utils.py +131 -131
  36. edsl/data/Cache.py +555 -555
  37. edsl/data/CacheEntry.py +233 -233
  38. edsl/data/CacheHandler.py +149 -149
  39. edsl/data/RemoteCacheSync.py +78 -78
  40. edsl/data/SQLiteDict.py +292 -292
  41. edsl/data/__init__.py +4 -4
  42. edsl/data/orm.py +10 -10
  43. edsl/data_transfer_models.py +73 -73
  44. edsl/enums.py +175 -175
  45. edsl/exceptions/BaseException.py +21 -21
  46. edsl/exceptions/__init__.py +54 -54
  47. edsl/exceptions/agents.py +42 -42
  48. edsl/exceptions/cache.py +5 -5
  49. edsl/exceptions/configuration.py +16 -16
  50. edsl/exceptions/coop.py +10 -10
  51. edsl/exceptions/data.py +14 -14
  52. edsl/exceptions/general.py +34 -34
  53. edsl/exceptions/jobs.py +33 -33
  54. edsl/exceptions/language_models.py +63 -63
  55. edsl/exceptions/prompts.py +15 -15
  56. edsl/exceptions/questions.py +91 -91
  57. edsl/exceptions/results.py +29 -29
  58. edsl/exceptions/scenarios.py +22 -22
  59. edsl/exceptions/surveys.py +37 -37
  60. edsl/inference_services/AnthropicService.py +87 -87
  61. edsl/inference_services/AwsBedrock.py +120 -120
  62. edsl/inference_services/AzureAI.py +217 -217
  63. edsl/inference_services/DeepInfraService.py +18 -18
  64. edsl/inference_services/GoogleService.py +148 -148
  65. edsl/inference_services/GroqService.py +20 -20
  66. edsl/inference_services/InferenceServiceABC.py +147 -147
  67. edsl/inference_services/InferenceServicesCollection.py +97 -97
  68. edsl/inference_services/MistralAIService.py +123 -123
  69. edsl/inference_services/OllamaService.py +18 -18
  70. edsl/inference_services/OpenAIService.py +224 -224
  71. edsl/inference_services/PerplexityService.py +163 -163
  72. edsl/inference_services/TestService.py +89 -89
  73. edsl/inference_services/TogetherAIService.py +170 -170
  74. edsl/inference_services/models_available_cache.py +118 -118
  75. edsl/inference_services/rate_limits_cache.py +25 -25
  76. edsl/inference_services/registry.py +41 -41
  77. edsl/inference_services/write_available.py +10 -10
  78. edsl/jobs/Answers.py +56 -56
  79. edsl/jobs/Jobs.py +898 -898
  80. edsl/jobs/JobsChecks.py +147 -147
  81. edsl/jobs/JobsPrompts.py +268 -268
  82. edsl/jobs/JobsRemoteInferenceHandler.py +239 -239
  83. edsl/jobs/__init__.py +1 -1
  84. edsl/jobs/buckets/BucketCollection.py +63 -63
  85. edsl/jobs/buckets/ModelBuckets.py +65 -65
  86. edsl/jobs/buckets/TokenBucket.py +251 -251
  87. edsl/jobs/interviews/Interview.py +661 -661
  88. edsl/jobs/interviews/InterviewExceptionCollection.py +99 -99
  89. edsl/jobs/interviews/InterviewExceptionEntry.py +186 -186
  90. edsl/jobs/interviews/InterviewStatistic.py +63 -63
  91. edsl/jobs/interviews/InterviewStatisticsCollection.py +25 -25
  92. edsl/jobs/interviews/InterviewStatusDictionary.py +78 -78
  93. edsl/jobs/interviews/InterviewStatusLog.py +92 -92
  94. edsl/jobs/interviews/ReportErrors.py +66 -66
  95. edsl/jobs/interviews/interview_status_enum.py +9 -9
  96. edsl/jobs/runners/JobsRunnerAsyncio.py +466 -466
  97. edsl/jobs/runners/JobsRunnerStatus.py +330 -330
  98. edsl/jobs/tasks/QuestionTaskCreator.py +242 -242
  99. edsl/jobs/tasks/TaskCreators.py +64 -64
  100. edsl/jobs/tasks/TaskHistory.py +450 -450
  101. edsl/jobs/tasks/TaskStatusLog.py +23 -23
  102. edsl/jobs/tasks/task_status_enum.py +163 -163
  103. edsl/jobs/tokens/InterviewTokenUsage.py +27 -27
  104. edsl/jobs/tokens/TokenUsage.py +34 -34
  105. edsl/language_models/KeyLookup.py +30 -30
  106. edsl/language_models/LanguageModel.py +668 -668
  107. edsl/language_models/ModelList.py +155 -155
  108. edsl/language_models/RegisterLanguageModelsMeta.py +184 -184
  109. edsl/language_models/__init__.py +3 -3
  110. edsl/language_models/fake_openai_call.py +15 -15
  111. edsl/language_models/fake_openai_service.py +61 -61
  112. edsl/language_models/registry.py +190 -190
  113. edsl/language_models/repair.py +156 -156
  114. edsl/language_models/unused/ReplicateBase.py +83 -83
  115. edsl/language_models/utilities.py +64 -64
  116. edsl/notebooks/Notebook.py +258 -258
  117. edsl/notebooks/__init__.py +1 -1
  118. edsl/prompts/Prompt.py +362 -362
  119. edsl/prompts/__init__.py +2 -2
  120. edsl/questions/AnswerValidatorMixin.py +289 -289
  121. edsl/questions/QuestionBase.py +664 -664
  122. edsl/questions/QuestionBaseGenMixin.py +161 -161
  123. edsl/questions/QuestionBasePromptsMixin.py +217 -217
  124. edsl/questions/QuestionBudget.py +227 -227
  125. edsl/questions/QuestionCheckBox.py +359 -359
  126. edsl/questions/QuestionExtract.py +182 -182
  127. edsl/questions/QuestionFreeText.py +114 -114
  128. edsl/questions/QuestionFunctional.py +166 -166
  129. edsl/questions/QuestionList.py +231 -231
  130. edsl/questions/QuestionMultipleChoice.py +286 -286
  131. edsl/questions/QuestionNumerical.py +153 -153
  132. edsl/questions/QuestionRank.py +324 -324
  133. edsl/questions/Quick.py +41 -41
  134. edsl/questions/RegisterQuestionsMeta.py +71 -71
  135. edsl/questions/ResponseValidatorABC.py +174 -174
  136. edsl/questions/SimpleAskMixin.py +73 -73
  137. edsl/questions/__init__.py +26 -26
  138. edsl/questions/compose_questions.py +98 -98
  139. edsl/questions/decorators.py +21 -21
  140. edsl/questions/derived/QuestionLikertFive.py +76 -76
  141. edsl/questions/derived/QuestionLinearScale.py +87 -87
  142. edsl/questions/derived/QuestionTopK.py +93 -93
  143. edsl/questions/derived/QuestionYesNo.py +82 -82
  144. edsl/questions/descriptors.py +413 -413
  145. edsl/questions/prompt_templates/question_budget.jinja +13 -13
  146. edsl/questions/prompt_templates/question_checkbox.jinja +32 -32
  147. edsl/questions/prompt_templates/question_extract.jinja +11 -11
  148. edsl/questions/prompt_templates/question_free_text.jinja +3 -3
  149. edsl/questions/prompt_templates/question_linear_scale.jinja +11 -11
  150. edsl/questions/prompt_templates/question_list.jinja +17 -17
  151. edsl/questions/prompt_templates/question_multiple_choice.jinja +33 -33
  152. edsl/questions/prompt_templates/question_numerical.jinja +36 -36
  153. edsl/questions/question_registry.py +177 -177
  154. edsl/questions/settings.py +12 -12
  155. edsl/questions/templates/budget/answering_instructions.jinja +7 -7
  156. edsl/questions/templates/budget/question_presentation.jinja +7 -7
  157. edsl/questions/templates/checkbox/answering_instructions.jinja +10 -10
  158. edsl/questions/templates/checkbox/question_presentation.jinja +22 -22
  159. edsl/questions/templates/extract/answering_instructions.jinja +7 -7
  160. edsl/questions/templates/likert_five/answering_instructions.jinja +10 -10
  161. edsl/questions/templates/likert_five/question_presentation.jinja +11 -11
  162. edsl/questions/templates/linear_scale/answering_instructions.jinja +5 -5
  163. edsl/questions/templates/linear_scale/question_presentation.jinja +5 -5
  164. edsl/questions/templates/list/answering_instructions.jinja +3 -3
  165. edsl/questions/templates/list/question_presentation.jinja +5 -5
  166. edsl/questions/templates/multiple_choice/answering_instructions.jinja +9 -9
  167. edsl/questions/templates/multiple_choice/question_presentation.jinja +11 -11
  168. edsl/questions/templates/numerical/answering_instructions.jinja +6 -6
  169. edsl/questions/templates/numerical/question_presentation.jinja +6 -6
  170. edsl/questions/templates/rank/answering_instructions.jinja +11 -11
  171. edsl/questions/templates/rank/question_presentation.jinja +15 -15
  172. edsl/questions/templates/top_k/answering_instructions.jinja +8 -8
  173. edsl/questions/templates/top_k/question_presentation.jinja +22 -22
  174. edsl/questions/templates/yes_no/answering_instructions.jinja +6 -6
  175. edsl/questions/templates/yes_no/question_presentation.jinja +11 -11
  176. edsl/results/CSSParameterizer.py +108 -108
  177. edsl/results/Dataset.py +424 -424
  178. edsl/results/DatasetExportMixin.py +731 -731
  179. edsl/results/DatasetTree.py +275 -275
  180. edsl/results/Result.py +465 -465
  181. edsl/results/Results.py +1165 -1165
  182. edsl/results/ResultsDBMixin.py +238 -238
  183. edsl/results/ResultsExportMixin.py +43 -43
  184. edsl/results/ResultsFetchMixin.py +33 -33
  185. edsl/results/ResultsGGMixin.py +121 -121
  186. edsl/results/ResultsToolsMixin.py +98 -98
  187. edsl/results/Selector.py +135 -135
  188. edsl/results/TableDisplay.py +198 -198
  189. edsl/results/__init__.py +2 -2
  190. edsl/results/table_display.css +77 -77
  191. edsl/results/tree_explore.py +115 -115
  192. edsl/scenarios/FileStore.py +632 -632
  193. edsl/scenarios/Scenario.py +601 -601
  194. edsl/scenarios/ScenarioHtmlMixin.py +64 -64
  195. edsl/scenarios/ScenarioJoin.py +127 -127
  196. edsl/scenarios/ScenarioList.py +1287 -1287
  197. edsl/scenarios/ScenarioListExportMixin.py +52 -52
  198. edsl/scenarios/ScenarioListPdfMixin.py +261 -261
  199. edsl/scenarios/__init__.py +4 -4
  200. edsl/shared.py +1 -1
  201. edsl/study/ObjectEntry.py +173 -173
  202. edsl/study/ProofOfWork.py +113 -113
  203. edsl/study/SnapShot.py +80 -80
  204. edsl/study/Study.py +528 -528
  205. edsl/study/__init__.py +4 -4
  206. edsl/surveys/DAG.py +148 -148
  207. edsl/surveys/Memory.py +31 -31
  208. edsl/surveys/MemoryPlan.py +244 -244
  209. edsl/surveys/Rule.py +326 -326
  210. edsl/surveys/RuleCollection.py +387 -387
  211. edsl/surveys/Survey.py +1801 -1801
  212. edsl/surveys/SurveyCSS.py +261 -261
  213. edsl/surveys/SurveyExportMixin.py +259 -259
  214. edsl/surveys/SurveyFlowVisualizationMixin.py +179 -179
  215. edsl/surveys/SurveyQualtricsImport.py +284 -284
  216. edsl/surveys/__init__.py +3 -3
  217. edsl/surveys/base.py +53 -53
  218. edsl/surveys/descriptors.py +56 -56
  219. edsl/surveys/instructions/ChangeInstruction.py +49 -49
  220. edsl/surveys/instructions/Instruction.py +65 -65
  221. edsl/surveys/instructions/InstructionCollection.py +77 -77
  222. edsl/templates/error_reporting/base.html +23 -23
  223. edsl/templates/error_reporting/exceptions_by_model.html +34 -34
  224. edsl/templates/error_reporting/exceptions_by_question_name.html +16 -16
  225. edsl/templates/error_reporting/exceptions_by_type.html +16 -16
  226. edsl/templates/error_reporting/interview_details.html +115 -115
  227. edsl/templates/error_reporting/interviews.html +19 -19
  228. edsl/templates/error_reporting/overview.html +4 -4
  229. edsl/templates/error_reporting/performance_plot.html +1 -1
  230. edsl/templates/error_reporting/report.css +73 -73
  231. edsl/templates/error_reporting/report.html +117 -117
  232. edsl/templates/error_reporting/report.js +25 -25
  233. edsl/tools/__init__.py +1 -1
  234. edsl/tools/clusters.py +192 -192
  235. edsl/tools/embeddings.py +27 -27
  236. edsl/tools/embeddings_plotting.py +118 -118
  237. edsl/tools/plotting.py +112 -112
  238. edsl/tools/summarize.py +18 -18
  239. edsl/utilities/SystemInfo.py +28 -28
  240. edsl/utilities/__init__.py +22 -22
  241. edsl/utilities/ast_utilities.py +25 -25
  242. edsl/utilities/data/Registry.py +6 -6
  243. edsl/utilities/data/__init__.py +1 -1
  244. edsl/utilities/data/scooter_results.json +1 -1
  245. edsl/utilities/decorators.py +77 -77
  246. edsl/utilities/gcp_bucket/cloud_storage.py +96 -96
  247. edsl/utilities/interface.py +627 -627
  248. edsl/utilities/naming_utilities.py +263 -263
  249. edsl/utilities/repair_functions.py +28 -28
  250. edsl/utilities/restricted_python.py +70 -70
  251. edsl/utilities/utilities.py +424 -424
  252. {edsl-0.1.39.dev1.dist-info → edsl-0.1.39.dev3.dist-info}/LICENSE +21 -21
  253. {edsl-0.1.39.dev1.dist-info → edsl-0.1.39.dev3.dist-info}/METADATA +1 -1
  254. edsl-0.1.39.dev3.dist-info/RECORD +277 -0
  255. edsl-0.1.39.dev1.dist-info/RECORD +0 -277
  256. {edsl-0.1.39.dev1.dist-info → edsl-0.1.39.dev3.dist-info}/WHEEL +0 -0
edsl/results/Dataset.py CHANGED
@@ -1,424 +1,424 @@
1
- """A module to represent a dataset of observations."""
2
-
3
- from __future__ import annotations
4
- import random
5
- import json
6
- from collections import UserList
7
- from typing import Any, Union, Optional
8
- import sys
9
- import numpy as np
10
-
11
- from edsl.results.ResultsExportMixin import ResultsExportMixin
12
- from edsl.results.DatasetTree import Tree
13
- from edsl.results.TableDisplay import TableDisplay
14
-
15
-
16
- class Dataset(UserList, ResultsExportMixin):
17
- """A class to represent a dataset of observations."""
18
-
19
- def __init__(
20
- self, data: list[dict[str, Any]] = None, print_parameters: Optional[dict] = None
21
- ):
22
- """Initialize the dataset with the given data."""
23
- super().__init__(data)
24
- self.print_parameters = print_parameters
25
-
26
- def __len__(self) -> int:
27
- """Return the number of observations in the dataset.
28
-
29
- Need to override the __len__ method to return the number of observations in the dataset because
30
- otherwise, the UserList class would return the number of dictionaries in the dataset.
31
-
32
- >>> d = Dataset([{'a.b':[1,2,3,4]}])
33
- >>> len(d)
34
- 4
35
- """
36
- _, values = list(self.data[0].items())[0]
37
- return len(values)
38
-
39
- def keys(self) -> list[str]:
40
- """Return the keys of the first observation in the dataset.
41
-
42
- >>> d = Dataset([{'a.b':[1,2,3,4]}])
43
- >>> d.keys()
44
- ['a.b']
45
- """
46
- return [list(o.keys())[0] for o in self]
47
-
48
- def filter(self, expression):
49
- return self.to_scenario_list().filter(expression).to_dataset()
50
-
51
- def __repr__(self) -> str:
52
- """Return a string representation of the dataset."""
53
- return f"Dataset({self.data})"
54
-
55
- def write(self, filename: str, tablefmt: Optional[str] = None) -> None:
56
- return self.table(tablefmt=tablefmt).write(filename)
57
-
58
- def _repr_html_(self):
59
- # headers, data = self._tabular()
60
- return self.table(print_parameters=self.print_parameters)._repr_html_()
61
- # return TableDisplay(headers=headers, data=data, raw_data_set=self)
62
-
63
- def _tabular(self) -> tuple[list[str], list[list[Any]]]:
64
- # Extract headers
65
- headers = []
66
- for entry in self.data:
67
- headers.extend(entry.keys())
68
- headers = list(dict.fromkeys(headers)) # Ensure unique headers
69
-
70
- # Extract data
71
- max_len = max(len(values) for entry in self.data for values in entry.values())
72
- rows = []
73
- for i in range(max_len):
74
- row = []
75
- for header in headers:
76
- for entry in self.data:
77
- if header in entry:
78
- values = entry[header]
79
- row.append(values[i] if i < len(values) else None)
80
- break
81
- else:
82
- row.append(None) # Default to None if header is missing
83
- rows.append(row)
84
-
85
- return headers, rows
86
-
87
- def _key_to_value(self, key: str) -> Any:
88
- """Retrieve the value associated with the given key from the dataset.
89
-
90
- >>> d = Dataset([{'a.b':[1,2,3,4]}])
91
- >>> d._key_to_value('a.b')
92
- [1, 2, 3, 4]
93
-
94
- >>> d._key_to_value('a')
95
- Traceback (most recent call last):
96
- ...
97
- KeyError: "Key 'a' not found in any of the dictionaries."
98
-
99
- """
100
- potential_matches = []
101
- for data_dict in self.data:
102
- data_key, data_values = list(data_dict.items())[0]
103
- if key == data_key:
104
- return data_values
105
- if key == data_key.split(".")[-1]:
106
- potential_matches.append((data_key, data_values))
107
-
108
- if len(potential_matches) == 1:
109
- return potential_matches[0][1]
110
- elif len(potential_matches) > 1:
111
- raise KeyError(
112
- f"Key '{key}' found in more than one location: {[m[0] for m in potential_matches]}"
113
- )
114
-
115
- raise KeyError(f"Key '{key}' not found in any of the dictionaries.")
116
-
117
- def first(self) -> dict[str, Any]:
118
- """Get the first value of the first key in the first dictionary.
119
-
120
- >>> d = Dataset([{'a.b':[1,2,3,4]}])
121
- >>> d.first()
122
- 1
123
- """
124
-
125
- def get_values(d):
126
- """Get the values of the first key in the dictionary."""
127
- return list(d.values())[0]
128
-
129
- return get_values(self.data[0])[0]
130
-
131
- def print(self, pretty_labels=None, **kwargs):
132
- if "format" in kwargs:
133
- if kwargs["format"] not in ["html", "markdown", "rich", "latex"]:
134
- raise ValueError(f"Format '{kwargs['format']}' not supported.")
135
- if pretty_labels is None:
136
- pretty_labels = {}
137
- else:
138
- return self.rename(pretty_labels).print(**kwargs)
139
- return self.table()
140
-
141
- def rename(self, rename_dic) -> Dataset:
142
- new_data = []
143
- for observation in self.data:
144
- key, values = list(observation.items())[0]
145
- new_key = rename_dic.get(key, key)
146
- new_data.append({new_key: values})
147
- return Dataset(new_data)
148
-
149
- def select(self, *keys) -> Dataset:
150
- """Return a new dataset with only the selected keys.
151
-
152
- :param keys: The keys to select.
153
-
154
- >>> d = Dataset([{'a.b':[1,2,3,4]}, {'c.d':[5,6,7,8]}])
155
- >>> d.select('a.b')
156
- Dataset([{'a.b': [1, 2, 3, 4]}])
157
-
158
- >>> d.select('a.b', 'c.d')
159
- Dataset([{'a.b': [1, 2, 3, 4]}, {'c.d': [5, 6, 7, 8]}])
160
- """
161
- if isinstance(keys, str):
162
- keys = [keys]
163
-
164
- new_data = []
165
- for observation in self.data:
166
- observation_key = list(observation.keys())[0]
167
- if observation_key in keys:
168
- new_data.append(observation)
169
- return Dataset(new_data)
170
-
171
- def to_json(self):
172
- """Return a JSON representation of the dataset.
173
-
174
- >>> d = Dataset([{'a.b':[1,2,3,4]}])
175
- >>> d.to_json()
176
- [{'a.b': [1, 2, 3, 4]}]
177
- """
178
- return json.loads(
179
- json.dumps(self.data)
180
- ) # janky but I want to make sure it's serializable & deserializable
181
-
182
- def shuffle(self, seed=None) -> Dataset:
183
- """Return a new dataset with the observations shuffled.
184
-
185
- >>> d = Dataset([{'a.b':[1,2,3,4]}])
186
- >>> d.shuffle(seed=0)
187
- Dataset([{'a.b': [3, 1, 2, 4]}])
188
- """
189
- if seed is not None:
190
- random.seed(seed)
191
-
192
- indices = None
193
-
194
- for entry in self:
195
- key, values = list(entry.items())[0]
196
- if indices is None:
197
- indices = list(range(len(values)))
198
- random.shuffle(indices)
199
- entry[key] = [values[i] for i in indices]
200
-
201
- return self
202
-
203
- def expand(self, field):
204
- return self.to_scenario_list().expand(field).to_dataset()
205
-
206
- def sample(
207
- self,
208
- n: int = None,
209
- frac: float = None,
210
- with_replacement: bool = True,
211
- seed: Union[str, int, float] = None,
212
- ) -> Dataset:
213
- """Return a new dataset with a sample of the observations.
214
-
215
- :param n: The number of samples to take.
216
- :param frac: The fraction of samples to take.
217
- :param with_replacement: Whether to sample with replacement.
218
- :param seed: The seed for the random number generator.
219
-
220
- >>> d = Dataset([{'a.b':[1,2,3,4]}])
221
- >>> d.sample(n=2, seed=0, with_replacement=True)
222
- Dataset([{'a.b': [4, 4]}])
223
-
224
- >>> d.sample(n = 10, seed=0, with_replacement=False)
225
- Traceback (most recent call last):
226
- ...
227
- ValueError: Sample size cannot be greater than the number of available elements when sampling without replacement.
228
- """
229
- if seed is not None:
230
- random.seed(seed)
231
-
232
- # Validate the input for sampling parameters
233
- if n is None and frac is None:
234
- raise ValueError("Either 'n' or 'frac' must be provided for sampling.")
235
-
236
- if n is not None and frac is not None:
237
- raise ValueError("Only one of 'n' or 'frac' should be specified.")
238
-
239
- # Get the length of the lists from the first entry
240
- first_key, first_values = list(self[0].items())[0]
241
- total_length = len(first_values)
242
-
243
- # Determine the number of samples based on 'n' or 'frac'
244
- if n is None:
245
- n = int(total_length * frac)
246
-
247
- if not with_replacement and n > total_length:
248
- raise ValueError(
249
- "Sample size cannot be greater than the number of available elements when sampling without replacement."
250
- )
251
-
252
- # Sample indices based on the method chosen
253
- if with_replacement:
254
- indices = [random.randint(0, total_length - 1) for _ in range(n)]
255
- else:
256
- indices = random.sample(range(total_length), k=n)
257
-
258
- # Apply the same indices to all entries
259
- for entry in self:
260
- key, values = list(entry.items())[0]
261
- entry[key] = [values[i] for i in indices]
262
-
263
- return self
264
-
265
- def order_by(self, sort_key: str, reverse: bool = False) -> Dataset:
266
- """Return a new dataset with the observations sorted by the given key.
267
-
268
- :param sort_key: The key to sort the observations by.
269
- :param reverse: Whether to sort in reverse order.
270
-
271
- >>> d = Dataset([{'a':[1,2,3,4]}, {'b':[4,3,2,1]}])
272
- >>> d.order_by('a')
273
- Dataset([{'a': [1, 2, 3, 4]}, {'b': [4, 3, 2, 1]}])
274
-
275
- >>> d.order_by('a', reverse=True)
276
- Dataset([{'a': [4, 3, 2, 1]}, {'b': [1, 2, 3, 4]}])
277
-
278
- >>> d = Dataset([{'X.a':[1,2,3,4]}, {'X.b':[4,3,2,1]}])
279
- >>> d.order_by('a')
280
- Dataset([{'X.a': [1, 2, 3, 4]}, {'X.b': [4, 3, 2, 1]}])
281
-
282
-
283
- """
284
-
285
- def sort_indices(lst: list[Any]) -> list[int]:
286
- """
287
- Return the indices that would sort the list.
288
-
289
- :param lst: The list to be sorted.
290
- :return: A list of indices that would sort the list.
291
- """
292
- indices = np.argsort(lst).tolist()
293
- if reverse:
294
- indices.reverse()
295
- return indices
296
-
297
- number_found = 0
298
- for obs in self.data:
299
- key, values = list(obs.items())[0]
300
- # an obseration is {'a':[1,2,3,4]}
301
- # key = list(obs.keys())[0]
302
- if (
303
- sort_key == key or sort_key == key.split(".")[-1]
304
- ): # e.g., "age" in "scenario.age"
305
- relevant_values = values
306
- number_found += 1
307
-
308
- if number_found == 0:
309
- raise ValueError(f"Key '{sort_key}' not found in any of the dictionaries.")
310
- elif number_found > 1:
311
- raise ValueError(f"Key '{sort_key}' found in more than one dictionary.")
312
-
313
- # relevant_values = self._key_to_value(sort_key)
314
- sort_indices_list = sort_indices(relevant_values)
315
- new_data = []
316
- for observation in self.data:
317
- # print(observation)
318
- key, values = list(observation.items())[0]
319
- new_values = [values[i] for i in sort_indices_list]
320
- new_data.append({key: new_values})
321
-
322
- return Dataset(new_data)
323
-
324
- def tree(self, node_order: Optional[list[str]] = None) -> Tree:
325
- """Return a tree representation of the dataset.
326
-
327
- >>> d = Dataset([{'a':[1,2,3,4]}, {'b':[4,3,2,1]}])
328
- >>> d.tree()
329
- Tree(Dataset({'a': [1, 2, 3, 4], 'b': [4, 3, 2, 1]}))
330
- """
331
- return Tree(self, node_order=node_order)
332
-
333
- def table(
334
- self,
335
- *fields,
336
- tablefmt: Optional[str] = None,
337
- max_rows: Optional[int] = None,
338
- pretty_labels=None,
339
- print_parameters: Optional[dict] = None,
340
- ):
341
- if pretty_labels is not None:
342
- new_fields = []
343
- for field in fields:
344
- new_fields.append(pretty_labels.get(field, field))
345
- return self.rename(pretty_labels).table(
346
- *new_fields, tablefmt=tablefmt, max_rows=max_rows
347
- )
348
-
349
- self.print_parameters = print_parameters
350
-
351
- headers, data = self._tabular()
352
-
353
- if tablefmt is not None:
354
- from tabulate import tabulate_formats
355
-
356
- if tablefmt not in tabulate_formats:
357
- print(
358
- f"Error: The following table format is not supported: {tablefmt}",
359
- file=sys.stderr,
360
- )
361
- print(f"\nAvailable formats are: {tabulate_formats}", file=sys.stderr)
362
- return None
363
-
364
- if max_rows:
365
- if len(data) < max_rows:
366
- max_rows = None
367
-
368
- if fields:
369
- full_data = data
370
- data = []
371
- indices = []
372
- for field in fields:
373
- if field not in headers:
374
- print(
375
- f"Error: The following field was not found: {field}",
376
- file=sys.stderr,
377
- )
378
- print(f"\nAvailable fields are: {headers}", file=sys.stderr)
379
-
380
- # Optional: Suggest similar fields using difflib
381
- import difflib
382
-
383
- matches = difflib.get_close_matches(field, headers)
384
- if matches:
385
- print(f"\nDid you mean: {matches[0]} ?", file=sys.stderr)
386
- return None
387
- indices.append(headers.index(field))
388
- headers = fields
389
- for row in full_data:
390
- data.append([row[i] for i in indices])
391
-
392
- if max_rows is not None:
393
- if max_rows > len(data):
394
- raise ValueError(
395
- "max_rows cannot be greater than the number of rows in the dataset."
396
- )
397
- last_line = data[-1]
398
- spaces = len(data[max_rows])
399
- filler_line = ["." for i in range(spaces)]
400
- data = data[:max_rows]
401
- data.append(filler_line)
402
- data.append(last_line)
403
-
404
- return TableDisplay(
405
- data=data, headers=headers, tablefmt=tablefmt, raw_data_set=self
406
- )
407
-
408
- def summary(self):
409
- return Dataset([{"num_observations": [len(self)], "keys": [self.keys()]}])
410
-
411
- @classmethod
412
- def example(self):
413
- """Return an example dataset.
414
-
415
- >>> Dataset.example()
416
- Dataset([{'a': [1, 2, 3, 4]}, {'b': [4, 3, 2, 1]}])
417
- """
418
- return Dataset([{"a": [1, 2, 3, 4]}, {"b": [4, 3, 2, 1]}])
419
-
420
-
421
- if __name__ == "__main__":
422
- import doctest
423
-
424
- doctest.testmod(optionflags=doctest.ELLIPSIS)
1
+ """A module to represent a dataset of observations."""
2
+
3
+ from __future__ import annotations
4
+ import random
5
+ import json
6
+ from collections import UserList
7
+ from typing import Any, Union, Optional
8
+ import sys
9
+ import numpy as np
10
+
11
+ from edsl.results.ResultsExportMixin import ResultsExportMixin
12
+ from edsl.results.DatasetTree import Tree
13
+ from edsl.results.TableDisplay import TableDisplay
14
+
15
+
16
+ class Dataset(UserList, ResultsExportMixin):
17
+ """A class to represent a dataset of observations."""
18
+
19
+ def __init__(
20
+ self, data: list[dict[str, Any]] = None, print_parameters: Optional[dict] = None
21
+ ):
22
+ """Initialize the dataset with the given data."""
23
+ super().__init__(data)
24
+ self.print_parameters = print_parameters
25
+
26
+ def __len__(self) -> int:
27
+ """Return the number of observations in the dataset.
28
+
29
+ Need to override the __len__ method to return the number of observations in the dataset because
30
+ otherwise, the UserList class would return the number of dictionaries in the dataset.
31
+
32
+ >>> d = Dataset([{'a.b':[1,2,3,4]}])
33
+ >>> len(d)
34
+ 4
35
+ """
36
+ _, values = list(self.data[0].items())[0]
37
+ return len(values)
38
+
39
+ def keys(self) -> list[str]:
40
+ """Return the keys of the first observation in the dataset.
41
+
42
+ >>> d = Dataset([{'a.b':[1,2,3,4]}])
43
+ >>> d.keys()
44
+ ['a.b']
45
+ """
46
+ return [list(o.keys())[0] for o in self]
47
+
48
+ def filter(self, expression):
49
+ return self.to_scenario_list().filter(expression).to_dataset()
50
+
51
+ def __repr__(self) -> str:
52
+ """Return a string representation of the dataset."""
53
+ return f"Dataset({self.data})"
54
+
55
+ def write(self, filename: str, tablefmt: Optional[str] = None) -> None:
56
+ return self.table(tablefmt=tablefmt).write(filename)
57
+
58
+ def _repr_html_(self):
59
+ # headers, data = self._tabular()
60
+ return self.table(print_parameters=self.print_parameters)._repr_html_()
61
+ # return TableDisplay(headers=headers, data=data, raw_data_set=self)
62
+
63
+ def _tabular(self) -> tuple[list[str], list[list[Any]]]:
64
+ # Extract headers
65
+ headers = []
66
+ for entry in self.data:
67
+ headers.extend(entry.keys())
68
+ headers = list(dict.fromkeys(headers)) # Ensure unique headers
69
+
70
+ # Extract data
71
+ max_len = max(len(values) for entry in self.data for values in entry.values())
72
+ rows = []
73
+ for i in range(max_len):
74
+ row = []
75
+ for header in headers:
76
+ for entry in self.data:
77
+ if header in entry:
78
+ values = entry[header]
79
+ row.append(values[i] if i < len(values) else None)
80
+ break
81
+ else:
82
+ row.append(None) # Default to None if header is missing
83
+ rows.append(row)
84
+
85
+ return headers, rows
86
+
87
+ def _key_to_value(self, key: str) -> Any:
88
+ """Retrieve the value associated with the given key from the dataset.
89
+
90
+ >>> d = Dataset([{'a.b':[1,2,3,4]}])
91
+ >>> d._key_to_value('a.b')
92
+ [1, 2, 3, 4]
93
+
94
+ >>> d._key_to_value('a')
95
+ Traceback (most recent call last):
96
+ ...
97
+ KeyError: "Key 'a' not found in any of the dictionaries."
98
+
99
+ """
100
+ potential_matches = []
101
+ for data_dict in self.data:
102
+ data_key, data_values = list(data_dict.items())[0]
103
+ if key == data_key:
104
+ return data_values
105
+ if key == data_key.split(".")[-1]:
106
+ potential_matches.append((data_key, data_values))
107
+
108
+ if len(potential_matches) == 1:
109
+ return potential_matches[0][1]
110
+ elif len(potential_matches) > 1:
111
+ raise KeyError(
112
+ f"Key '{key}' found in more than one location: {[m[0] for m in potential_matches]}"
113
+ )
114
+
115
+ raise KeyError(f"Key '{key}' not found in any of the dictionaries.")
116
+
117
+ def first(self) -> dict[str, Any]:
118
+ """Get the first value of the first key in the first dictionary.
119
+
120
+ >>> d = Dataset([{'a.b':[1,2,3,4]}])
121
+ >>> d.first()
122
+ 1
123
+ """
124
+
125
+ def get_values(d):
126
+ """Get the values of the first key in the dictionary."""
127
+ return list(d.values())[0]
128
+
129
+ return get_values(self.data[0])[0]
130
+
131
+ def print(self, pretty_labels=None, **kwargs):
132
+ if "format" in kwargs:
133
+ if kwargs["format"] not in ["html", "markdown", "rich", "latex"]:
134
+ raise ValueError(f"Format '{kwargs['format']}' not supported.")
135
+ if pretty_labels is None:
136
+ pretty_labels = {}
137
+ else:
138
+ return self.rename(pretty_labels).print(**kwargs)
139
+ return self.table()
140
+
141
+ def rename(self, rename_dic) -> Dataset:
142
+ new_data = []
143
+ for observation in self.data:
144
+ key, values = list(observation.items())[0]
145
+ new_key = rename_dic.get(key, key)
146
+ new_data.append({new_key: values})
147
+ return Dataset(new_data)
148
+
149
+ def select(self, *keys) -> Dataset:
150
+ """Return a new dataset with only the selected keys.
151
+
152
+ :param keys: The keys to select.
153
+
154
+ >>> d = Dataset([{'a.b':[1,2,3,4]}, {'c.d':[5,6,7,8]}])
155
+ >>> d.select('a.b')
156
+ Dataset([{'a.b': [1, 2, 3, 4]}])
157
+
158
+ >>> d.select('a.b', 'c.d')
159
+ Dataset([{'a.b': [1, 2, 3, 4]}, {'c.d': [5, 6, 7, 8]}])
160
+ """
161
+ if isinstance(keys, str):
162
+ keys = [keys]
163
+
164
+ new_data = []
165
+ for observation in self.data:
166
+ observation_key = list(observation.keys())[0]
167
+ if observation_key in keys:
168
+ new_data.append(observation)
169
+ return Dataset(new_data)
170
+
171
+ def to_json(self):
172
+ """Return a JSON representation of the dataset.
173
+
174
+ >>> d = Dataset([{'a.b':[1,2,3,4]}])
175
+ >>> d.to_json()
176
+ [{'a.b': [1, 2, 3, 4]}]
177
+ """
178
+ return json.loads(
179
+ json.dumps(self.data)
180
+ ) # janky but I want to make sure it's serializable & deserializable
181
+
182
+ def shuffle(self, seed=None) -> Dataset:
183
+ """Return a new dataset with the observations shuffled.
184
+
185
+ >>> d = Dataset([{'a.b':[1,2,3,4]}])
186
+ >>> d.shuffle(seed=0)
187
+ Dataset([{'a.b': [3, 1, 2, 4]}])
188
+ """
189
+ if seed is not None:
190
+ random.seed(seed)
191
+
192
+ indices = None
193
+
194
+ for entry in self:
195
+ key, values = list(entry.items())[0]
196
+ if indices is None:
197
+ indices = list(range(len(values)))
198
+ random.shuffle(indices)
199
+ entry[key] = [values[i] for i in indices]
200
+
201
+ return self
202
+
203
+ def expand(self, field):
204
+ return self.to_scenario_list().expand(field).to_dataset()
205
+
206
+ def sample(
207
+ self,
208
+ n: int = None,
209
+ frac: float = None,
210
+ with_replacement: bool = True,
211
+ seed: Union[str, int, float] = None,
212
+ ) -> Dataset:
213
+ """Return a new dataset with a sample of the observations.
214
+
215
+ :param n: The number of samples to take.
216
+ :param frac: The fraction of samples to take.
217
+ :param with_replacement: Whether to sample with replacement.
218
+ :param seed: The seed for the random number generator.
219
+
220
+ >>> d = Dataset([{'a.b':[1,2,3,4]}])
221
+ >>> d.sample(n=2, seed=0, with_replacement=True)
222
+ Dataset([{'a.b': [4, 4]}])
223
+
224
+ >>> d.sample(n = 10, seed=0, with_replacement=False)
225
+ Traceback (most recent call last):
226
+ ...
227
+ ValueError: Sample size cannot be greater than the number of available elements when sampling without replacement.
228
+ """
229
+ if seed is not None:
230
+ random.seed(seed)
231
+
232
+ # Validate the input for sampling parameters
233
+ if n is None and frac is None:
234
+ raise ValueError("Either 'n' or 'frac' must be provided for sampling.")
235
+
236
+ if n is not None and frac is not None:
237
+ raise ValueError("Only one of 'n' or 'frac' should be specified.")
238
+
239
+ # Get the length of the lists from the first entry
240
+ first_key, first_values = list(self[0].items())[0]
241
+ total_length = len(first_values)
242
+
243
+ # Determine the number of samples based on 'n' or 'frac'
244
+ if n is None:
245
+ n = int(total_length * frac)
246
+
247
+ if not with_replacement and n > total_length:
248
+ raise ValueError(
249
+ "Sample size cannot be greater than the number of available elements when sampling without replacement."
250
+ )
251
+
252
+ # Sample indices based on the method chosen
253
+ if with_replacement:
254
+ indices = [random.randint(0, total_length - 1) for _ in range(n)]
255
+ else:
256
+ indices = random.sample(range(total_length), k=n)
257
+
258
+ # Apply the same indices to all entries
259
+ for entry in self:
260
+ key, values = list(entry.items())[0]
261
+ entry[key] = [values[i] for i in indices]
262
+
263
+ return self
264
+
265
+ def order_by(self, sort_key: str, reverse: bool = False) -> Dataset:
266
+ """Return a new dataset with the observations sorted by the given key.
267
+
268
+ :param sort_key: The key to sort the observations by.
269
+ :param reverse: Whether to sort in reverse order.
270
+
271
+ >>> d = Dataset([{'a':[1,2,3,4]}, {'b':[4,3,2,1]}])
272
+ >>> d.order_by('a')
273
+ Dataset([{'a': [1, 2, 3, 4]}, {'b': [4, 3, 2, 1]}])
274
+
275
+ >>> d.order_by('a', reverse=True)
276
+ Dataset([{'a': [4, 3, 2, 1]}, {'b': [1, 2, 3, 4]}])
277
+
278
+ >>> d = Dataset([{'X.a':[1,2,3,4]}, {'X.b':[4,3,2,1]}])
279
+ >>> d.order_by('a')
280
+ Dataset([{'X.a': [1, 2, 3, 4]}, {'X.b': [4, 3, 2, 1]}])
281
+
282
+
283
+ """
284
+
285
+ def sort_indices(lst: list[Any]) -> list[int]:
286
+ """
287
+ Return the indices that would sort the list.
288
+
289
+ :param lst: The list to be sorted.
290
+ :return: A list of indices that would sort the list.
291
+ """
292
+ indices = np.argsort(lst).tolist()
293
+ if reverse:
294
+ indices.reverse()
295
+ return indices
296
+
297
+ number_found = 0
298
+ for obs in self.data:
299
+ key, values = list(obs.items())[0]
300
+ # an obseration is {'a':[1,2,3,4]}
301
+ # key = list(obs.keys())[0]
302
+ if (
303
+ sort_key == key or sort_key == key.split(".")[-1]
304
+ ): # e.g., "age" in "scenario.age"
305
+ relevant_values = values
306
+ number_found += 1
307
+
308
+ if number_found == 0:
309
+ raise ValueError(f"Key '{sort_key}' not found in any of the dictionaries.")
310
+ elif number_found > 1:
311
+ raise ValueError(f"Key '{sort_key}' found in more than one dictionary.")
312
+
313
+ # relevant_values = self._key_to_value(sort_key)
314
+ sort_indices_list = sort_indices(relevant_values)
315
+ new_data = []
316
+ for observation in self.data:
317
+ # print(observation)
318
+ key, values = list(observation.items())[0]
319
+ new_values = [values[i] for i in sort_indices_list]
320
+ new_data.append({key: new_values})
321
+
322
+ return Dataset(new_data)
323
+
324
+ def tree(self, node_order: Optional[list[str]] = None) -> Tree:
325
+ """Return a tree representation of the dataset.
326
+
327
+ >>> d = Dataset([{'a':[1,2,3,4]}, {'b':[4,3,2,1]}])
328
+ >>> d.tree()
329
+ Tree(Dataset({'a': [1, 2, 3, 4], 'b': [4, 3, 2, 1]}))
330
+ """
331
+ return Tree(self, node_order=node_order)
332
+
333
+ def table(
334
+ self,
335
+ *fields,
336
+ tablefmt: Optional[str] = None,
337
+ max_rows: Optional[int] = None,
338
+ pretty_labels=None,
339
+ print_parameters: Optional[dict] = None,
340
+ ):
341
+ if pretty_labels is not None:
342
+ new_fields = []
343
+ for field in fields:
344
+ new_fields.append(pretty_labels.get(field, field))
345
+ return self.rename(pretty_labels).table(
346
+ *new_fields, tablefmt=tablefmt, max_rows=max_rows
347
+ )
348
+
349
+ self.print_parameters = print_parameters
350
+
351
+ headers, data = self._tabular()
352
+
353
+ if tablefmt is not None:
354
+ from tabulate import tabulate_formats
355
+
356
+ if tablefmt not in tabulate_formats:
357
+ print(
358
+ f"Error: The following table format is not supported: {tablefmt}",
359
+ file=sys.stderr,
360
+ )
361
+ print(f"\nAvailable formats are: {tabulate_formats}", file=sys.stderr)
362
+ return None
363
+
364
+ if max_rows:
365
+ if len(data) < max_rows:
366
+ max_rows = None
367
+
368
+ if fields:
369
+ full_data = data
370
+ data = []
371
+ indices = []
372
+ for field in fields:
373
+ if field not in headers:
374
+ print(
375
+ f"Error: The following field was not found: {field}",
376
+ file=sys.stderr,
377
+ )
378
+ print(f"\nAvailable fields are: {headers}", file=sys.stderr)
379
+
380
+ # Optional: Suggest similar fields using difflib
381
+ import difflib
382
+
383
+ matches = difflib.get_close_matches(field, headers)
384
+ if matches:
385
+ print(f"\nDid you mean: {matches[0]} ?", file=sys.stderr)
386
+ return None
387
+ indices.append(headers.index(field))
388
+ headers = fields
389
+ for row in full_data:
390
+ data.append([row[i] for i in indices])
391
+
392
+ if max_rows is not None:
393
+ if max_rows > len(data):
394
+ raise ValueError(
395
+ "max_rows cannot be greater than the number of rows in the dataset."
396
+ )
397
+ last_line = data[-1]
398
+ spaces = len(data[max_rows])
399
+ filler_line = ["." for i in range(spaces)]
400
+ data = data[:max_rows]
401
+ data.append(filler_line)
402
+ data.append(last_line)
403
+
404
+ return TableDisplay(
405
+ data=data, headers=headers, tablefmt=tablefmt, raw_data_set=self
406
+ )
407
+
408
+ def summary(self):
409
+ return Dataset([{"num_observations": [len(self)], "keys": [self.keys()]}])
410
+
411
+ @classmethod
412
+ def example(self):
413
+ """Return an example dataset.
414
+
415
+ >>> Dataset.example()
416
+ Dataset([{'a': [1, 2, 3, 4]}, {'b': [4, 3, 2, 1]}])
417
+ """
418
+ return Dataset([{"a": [1, 2, 3, 4]}, {"b": [4, 3, 2, 1]}])
419
+
420
+
421
+ if __name__ == "__main__":
422
+ import doctest
423
+
424
+ doctest.testmod(optionflags=doctest.ELLIPSIS)