boris-behav-obs 9.7.15__py3-none-any.whl → 9.8.2__py3-none-any.whl

boris/project_functions.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
   This program is free software; you can redistribute it and/or modify
   it under the terms of the GNU General Public License as published by
@@ -347,7 +347,7 @@ def check_state_events_obs(obsId: str, ethogram: dict, observation: dict, time_f
     return (False, out) if out else (True, "No problem detected")
 
 
-def check_state_events(pj: dict, observations_list: list) -> Tuple[bool, tuple]:
+def check_state_events(pj: dict, observations_list: list) -> tuple[bool, list]:
     """
     check if state events are paired in a list of observations
     use check_state_events_obs function
@@ -422,9 +422,9 @@ def check_project_integrity(
     r = check_coded_behaviors(pj)
     if r:
         out += f"The following behaviors are not defined in the ethogram: <b>{', '.join(r)}</b><br>"
-        flag_all_behaviors_defined = False
-    else:
-        flag_all_behaviors_defined = True
+    #    flag_all_behaviors_defined = False
+    # else:
+    #    flag_all_behaviors_defined = True
 
     # check for unpaired state events
     for obs_id in pj[cfg.OBSERVATIONS]:
@@ -730,13 +730,13 @@ def create_subtitles(pj: dict, selected_observations: list, parameters: dict, ex
                 mem_command = dialog.MessageDialog(
                     cfg.programName,
                     f"The file {file_name} already exists.",
-                    [
+                    (
                         cfg.OVERWRITE,
                         cfg.OVERWRITE_ALL,
                         cfg.SKIP,
                         cfg.SKIP_ALL,
                         cfg.CANCEL,
-                    ],
+                    ),
                 )
                 if mem_command == cfg.CANCEL:
                     return False, ""
@@ -837,13 +837,13 @@ def create_subtitles(pj: dict, selected_observations: list, parameters: dict, ex
                         mem_command = dialog.MessageDialog(
                             cfg.programName,
                             f"The file {file_name} already exists.",
-                            [
+                            (
                                 cfg.OVERWRITE,
                                 cfg.OVERWRITE_ALL,
                                 cfg.SKIP,
                                 cfg.SKIP_ALL,
                                 cfg.CANCEL,
-                            ],
+                            ),
                         )
                         if mem_command == cfg.CANCEL:
                             return False, ""
@@ -1145,7 +1145,7 @@ def remove_media_files_path(pj: dict, project_file_name: str) -> bool:
                     f"{',<br>'.join(file_not_found)}"
                     "<br><br>Are you sure to continue?"
                 ),
-                [cfg.YES, cfg.NO],
+                (cfg.YES, cfg.NO),
             )
             == cfg.NO
         ):
@@ -1215,7 +1215,7 @@ def full_path(path: str, project_file_name: str) -> str:
             return ""
 
 
-def observed_interval(observation: dict) -> Tuple[dec, dec]:
+def observed_interval(observation: dict) -> tuple[dec, dec] | None:
     """
     Observed interval for observation
 
@@ -1580,7 +1580,7 @@ def open_project_json(project_file_name: str) -> tuple:
             copyfile(project_file_name, old_project_file_name)
             msg += f"\n\nThe old file project was saved as {old_project_file_name}"
         except Exception:
-            QMessageBox.critical(cfg.programName, f"Error saving old project to {old_project_file_name}")
+            QMessageBox.critical(None, cfg.programName, f"Error saving old project to {old_project_file_name}")
 
         pj[cfg.PROJECT_VERSION] = cfg.project_format_version
 

boris/project_import_export.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
 This file is part of BORIS.
 

boris/select_modifiers.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
 This file is part of BORIS.
 

boris/select_observations.py

@@ -1,28 +1,26 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
+This file is part of BORIS.
 
-  This program is free software; you can redistribute it and/or modify
+  BORIS is free software; you can redistribute it and/or modify
   it under the terms of the GNU General Public License as published by
-  the Free Software Foundation; either version 2 of the License, or
-  (at your option) any later version.
+  the Free Software Foundation; either version 3 of the License, or
+  any later version.
 
-  This program is distributed in the hope that it will be useful,
+  BORIS is distributed in the hope that it will be useful,
   but WITHOUT ANY WARRANTY; without even the implied warranty of
   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
   GNU General Public License for more details.
 
   You should have received a copy of the GNU General Public License
-  along with this program; if not, write to the Free Software
-  Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
-  MA 02110-1301, USA.
+  along with this program; if not see <http://www.gnu.org/licenses/>.
 
 """
 
 import logging
-from typing import Tuple
 
 from PySide6.QtCore import Qt
 from PySide6.QtWidgets import QAbstractItemView
@@ -32,7 +30,7 @@ from . import gui_utilities, observations_list, project_functions
 from . import utilities as util
 
 
-def select_observations2(self, mode: str, windows_title: str = "") -> Tuple[str, list]:
+def select_observations2(self, mode: str, windows_title: str = "") -> tuple[str, list[str]]:
     """
     allow user to select observations
     mode: accepted values: OPEN, EDIT, SINGLE, MULTIPLE, SELECT1
@@ -149,37 +147,37 @@ def select_observations2(self, mode: str, windows_title: str = "") -> Tuple[str,
     obsList.mode = mode
 
     if mode == cfg.OPEN:
-        obsList.view.setSelectionMode(QAbstractItemView.SingleSelection)
+        obsList.view.setSelectionMode(QAbstractItemView.SelectionMode.SingleSelection)
         obsList.pbOpen.setVisible(True)
 
     if mode == cfg.VIEW:
-        obsList.view.setSelectionMode(QAbstractItemView.SingleSelection)
+        obsList.view.setSelectionMode(QAbstractItemView.SelectionMode.SingleSelection)
         obsList.pbView.setVisible(True)
 
     if mode == cfg.EDIT:
-        obsList.view.setSelectionMode(QAbstractItemView.SingleSelection)
+        obsList.view.setSelectionMode(QAbstractItemView.SelectionMode.SingleSelection)
         obsList.pbEdit.setVisible(True)
 
     if mode == cfg.SINGLE:
-        obsList.view.setSelectionMode(QAbstractItemView.SingleSelection)
+        obsList.view.setSelectionMode(QAbstractItemView.SelectionMode.SingleSelection)
         obsList.pbOpen.setVisible(True)
         obsList.pbView.setVisible(True)
         obsList.pbEdit.setVisible(True)
 
     if mode == cfg.MULTIPLE:
-        obsList.view.setSelectionMode(QAbstractItemView.MultiSelection)
+        obsList.view.setSelectionMode(QAbstractItemView.SelectionMode.MultiSelection)
         obsList.pbOk.setVisible(True)
         obsList.pbSelectAll.setVisible(True)
         obsList.pbUnSelectAll.setVisible(True)
 
     if mode == cfg.SELECT1:
-        obsList.view.setSelectionMode(QAbstractItemView.SingleSelection)
+        obsList.view.setSelectionMode(QAbstractItemView.SelectionMode.SingleSelection)
         obsList.pbOk.setVisible(True)
 
     # restore window geometry
     gui_utilities.restore_geometry(obsList, "observations list", (900, 600))
 
-    obsList.view.sortItems(0, Qt.AscendingOrder)
+    obsList.view.sortItems(0, Qt.SortOrder.AscendingOrder)
     for row in range(obsList.view.rowCount()):
         obsList.view.resizeRowToContents(row)
 
@@ -196,15 +194,16 @@ def select_observations2(self, mode: str, windows_title: str = "") -> Tuple[str,
                 if idx.column() == 0:  # first column
                     selected_observations.append(idx.data())
 
+    result_str: str = ""
     if result == 0:  # cancel
-        resultStr = ""
+        result_str = ""
     if result == 1:  # select
-        resultStr = "ok"
+        result_str = "ok"
     if result == 2:  # open
-        resultStr = cfg.OPEN
+        result_str = cfg.OPEN
     if result == 3:  # edit
-        resultStr = cfg.EDIT
+        result_str = cfg.EDIT
     if result == 4:  # view
-        resultStr = cfg.VIEW
+        result_str = cfg.VIEW
 
-    return resultStr, selected_observations
+    return result_str, selected_observations

boris/select_subj_behav.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
 This file is part of BORIS.
 
@@ -35,7 +35,7 @@ from . import utilities as util
 
 def choose_obs_subj_behav_category(
     self,
-    selected_observations: list,
+    selected_observations: list[str],
     start_coding: Optional[dec] = dec("NaN"),  #  Union[..., None]
     end_coding: Optional[dec] = dec("NaN"),
     start_interval: Optional[dec] = dec("NaN"),
@@ -246,8 +246,8 @@ def choose_obs_subj_behav_category(
                 None,
                 cfg.programName,
                 "The start time is after the end time",
-                QMessageBox.Ok | QMessageBox.Default,
-                QMessageBox.NoButton,
+                QMessageBox.StandardButton.Ok | QMessageBox.StandardButton.Default,
+                QMessageBox.StandardButton.NoButton,
             )
             return {cfg.SELECTED_SUBJECTS: [], cfg.SELECTED_BEHAVIORS: []}
 

boris/state_events.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
   This program is free software; you can redistribute it and/or modify
   it under the terms of the GNU General Public License as published by

boris/subjects_pad.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
   This program is free software; you can redistribute it and/or modify
   it under the terms of the GNU General Public License as published by

boris/synthetic_time_budget.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
 This file is part of BORIS.
 

boris/time_budget_functions.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
   This program is free software; you can redistribute it and/or modify
   it under the terms of the GNU General Public License as published by

boris/time_budget_widget.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
 This file is part of BORIS.
 

boris/transitions.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
 This file is part of BORIS.
 

boris/utilities.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
   This program is free software; you can redistribute it and/or modify
   it under the terms of the GNU General Public License as published by

boris/version.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
 This file is part of BORIS.
 
@@ -20,5 +20,5 @@ This file is part of BORIS.
 
 """
 
-__version__ = "9.7.15"
-__version_date__ = "2025-12-19"
+__version__ = "9.8.2a1"
+__version_date__ = "2026-01-26"

boris/video_equalizer.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
 This file is part of BORIS.
 

boris/video_operations.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
 
   This program is free software; you can redistribute it and/or modify

boris/view_df.py

@@ -1,11 +1,35 @@
-from .view_df_ui import Ui_Form
-from PySide6.QtWidgets import QWidget, QFileDialog
-from PySide6.QtCore import Qt, QAbstractTableModel
+"""
+BORIS
+Behavioral Observation Research Interactive Software
+Copyright 2012-2026 Olivier Friard
+
+This file is part of BORIS.
+
+  BORIS is free software; you can redistribute it and/or modify
+  it under the terms of the GNU General Public License as published by
+  the Free Software Foundation; either version 3 of the License, or
+  any later version.
+
+  BORIS is distributed in the hope that it will be useful,
+  but WITHOUT ANY WARRANTY; without even the implied warranty of
+  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+  GNU General Public License for more details.
+
+  You should have received a copy of the GNU General Public License
+  along with this program; if not see <http://www.gnu.org/licenses/>.
+
+"""
 
-from . import config as cfg
 from pathlib import Path
+
+from PySide6.QtCore import QAbstractTableModel, Qt
+from PySide6.QtWidgets import QFileDialog, QWidget
+
+from . import config as cfg
 from . import dialog
+from .view_df_ui import Ui_Form
 
+flag_pyreadr_loaded: bool = False
 try:
     import pyreadr
 

boris/write_event.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2025 Olivier Friard
+Copyright 2012-2026 Olivier Friard
 
 
   This program is free software; you can redistribute it and/or modify

{boris_behav_obs-9.7.15.dist-info → boris_behav_obs-9.8.2.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: boris-behav-obs
-Version: 9.7.15
+Version: 9.8.2
 Summary: BORIS - Behavioral Observation Research Interactive Software
 Author-email: Olivier Friard <olivier.friard@unito.it>
 License-Expression: GPL-3.0-only
@@ -51,7 +51,7 @@ It provides also some analysis tools like time budget and some plotting function
 <!-- The BO-RIS paper has more than [![BORIS citations counter](https://penelope.unito.it/friard/boris_scopus_citations.png) citations](https://www.boris.unito.it/citations) in peer-reviewed scientific publications. -->
 
 
-The BORIS paper has more than 2475 citations in peer-reviewed scientific publications.
+The BORIS paper has more than 2491 citations in peer-reviewed scientific publications.
 
 
 

boris_behav_obs-9.8.2.dist-info/RECORD

@@ -0,0 +1,110 @@
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{boris_behav_obs-9.7.15.dist-info → boris_behav_obs-9.8.2.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (80.9.0)
+Generator: setuptools (80.10.2)
 Root-Is-Purelib: true
 Tag: py3-none-any