biopipen 0.34.6__py3-none-any.whl → 0.34.26__py3-none-any.whl

biopipen/scripts/tcr/ClonalStats.R

@@ -21,7 +21,7 @@ VIZ_TYPE_TO_SECTION <- list(
     abundance = "Clonal Abundance",
     length = "Clonal Sequence Length",
     residency = "Clonal Residency",
-    dynamics = "Clonal Dynamics",
+    stat = "Clonal Statistics",
     composition = "Clonal Composition",
     overlap = "Clonal Overlap",
     diversity = "Clonal Diversity",
@@ -114,15 +114,15 @@ get_plot_descr <- function(viz_type, case) {
             )
         }
         out <- glue("{out} The clones are identified by {case$clone_call %||% 'aa'} and {case$chain %||% 'both'} chain(s) was/were used.")
-    } else if (identical(viz_type, "dynamics")) {
+    } else if (identical(viz_type, "stat")) {
         if (case$plot_type %in% c("sankey", "alluvial")) {
             out <- glue(
-                "This {case$plot_type} plot illustrates the dynamics of clones across different groups. ",
+                "This {case$plot_type} plot illustrates the statistics of clones across different groups. ",
                 "The bars are showing the groups and the flow/links are showing the transitions of the clones. "
             )
         } else {  # trend
             out <- glue(
-                "This trend plot illustrates the dynamics of clones across different groups. ",
+                "This trend plot illustrates the statistics of clones across different groups. ",
                 "The x-axis represents the groups, while the y-axis denotes the number/fraction of clones. ",
                 "The links between the groups are showing the transitions of the clones. "
             )
@@ -429,18 +429,21 @@ cases <- list_rename(cases, function(name, case) {
 })
 
 do_case <- function(name, case) {
-    log$info("- Processing case: {name}")
+    log$info("- Case: {name}")
     info <- case_info(name, outdir, is_dir = FALSE, create = TRUE)
 
-    case <- extract_vars(case, "viz_type", "descr", "devpars", "more_formats", "save_code", subset_ = "subset")
+    case <- extract_vars(case, "viz_type", "descr", "devpars", "more_formats", "save_code", "save_data", subset_ = "subset")
 
     if (!is.null(subset_)) {
         case$data <- ScRepSubset(screp, subset_)
     } else {
         case$data <- screp
     }
-
-    plot_fn <- paste0("Clonal", tools::toTitleCase(viz_type), "Plot")
+    fnname <- tools::toTitleCase(viz_type)
+    if (fnname == "Geneusage") {
+        fnname <- "GeneUsage"
+    }
+    plot_fn <- paste0("Clonal", fnname, "Plot")
     plot_fn <- utils::getFromNamespace(plot_fn, "scplotter")
     if (is.null(plot_fn)) {
         stop("Error: Unknown visualization type: ", viz_type)
@@ -449,35 +452,73 @@ do_case <- function(name, case) {
     p <- do_call(plot_fn, case)
     save_plot(p, info$prefix, devpars, formats = unique(c("png", more_formats)))
 
-    report <- list(
-        kind = "table_image",
-        src = paste0(info$prefix, ".png"),
-        download = list(),
-        descr = html_escape(descr %||% get_plot_descr(viz_type, case)),
-        name = html_escape(info$name)
-    )
-    exformats <- setdiff(more_formats, "png")
-    if (length(exformats) > 0) {
-        report$download <- lapply(exformats, function(fmt) {
-            paste0(info$prefix, ".", fmt)
-        })
-    }
-
-    if (isTRUE(save_code)) {
-        save_plotcode(
-            p,
-            setup = c('library(scplotter)', '', 'load("data.RData")'),
-            prefix = info$prefix,
-            "case"
+    if (save_data) {
+        pdata <- attr(p, "data") %||% p$data
+        if (!inherits(pdata, "data.frame") && !inherits(pdata, "matrix")) {
+            stop("'save_data = TRUE' is not supported for viz_type: ", viz_type, " and plot_type: ", case$plot_type)
+        }
+        write.table(pdata, paste0(info$prefix, ".data.txt"), sep="\t", quote=FALSE, row.names=FALSE)
+        reporter$add2(
+            list(
+                name = "Plot",
+                contents = list(
+                    list(
+                        kind = "descr",
+                        content = html_escape(descr %||% get_plot_descr(viz_type, case))
+                    ),
+                    reporter$image(
+                        info$prefix, more_formats, save_code, kind = "image"
+                    )
+                )
+            ),
+            list(
+                name = "Data",
+                contents = list(
+                    list(
+                        kind = "descr",
+                        content = "The data used to generate the plot."
+                    ),
+                    list(
+                        kind = "table",
+                        src = paste0(info$prefix, ".data.txt"),
+                        data = list(nrows = 100)
+                    )
+                )
+            ),
+            hs = c(info$section, info$name),
+            ui = "tabs"
         )
-        report$download <- c(report$download, list(list(
-            src = paste0(info$prefix, ".code.zip"),
-            tip = "Download the code to reproduce the plot",
-            icon = "Code"
-        )))
-    }
+    } else {
+        report <- list(
+            kind = "table_image",
+            src = paste0(info$prefix, ".png"),
+            download = list(),
+            descr = html_escape(descr %||% get_plot_descr(viz_type, case)),
+            name = html_escape(info$name)
+        )
+        exformats <- setdiff(more_formats, "png")
+        if (length(exformats) > 0) {
+            report$download <- lapply(exformats, function(fmt) {
+                paste0(info$prefix, ".", fmt)
+            })
+        }
 
-    reporter$add2(report, hs = c(info$section, info$name), ui = "table_of_images:2")
+        if (isTRUE(save_code)) {
+            save_plotcode(
+                p,
+                setup = c('library(scplotter)', '', 'load("data.RData")'),
+                prefix = info$prefix,
+                "case"
+            )
+            report$download <- c(report$download, list(list(
+                src = paste0(info$prefix, ".code.zip"),
+                tip = "Download the code to reproduce the plot",
+                icon = "Code"
+            )))
+        }
+
+        reporter$add2(report, hs = c(info$section, info$name), ui = "table_of_images:2")
+    }
 }
 
 lapply(names(cases), function(name) do_case(name, cases[[name]]))

biopipen/utils/misc.py

@@ -23,15 +23,94 @@ _handler.setFormatter(
 logger.addHandler(_handler)
 
 
-def exec_code(code, global_vars=None, local_vars=None, return_var=None):
-    global_vars = global_vars or {}
-    local_vars = local_vars or {}
-    exec(code, global_vars, local_vars)
+def require_package(
+    package: str,
+    version: str | None = None,
+    python: str | None = None,
+) -> None:
+    """Require a Python package to be installed with optional version check.
 
-    if return_var is not None:
-        return local_vars[return_var]
+    The version specifier should follow the format used by pip, e.g., '>=1.2.3'.
+    Multiple version specifiers can be separated by commas, e.g., '>=1.2.3,<2.0.0'.
 
-    return None
+    Args:
+        package (str): The name of the package to check.
+        version (str | None): The version specifier string.
+        python (str | None): The Python interpreter to use.
+    """
+    if not python:
+        import importlib
+        from importlib.metadata import version as get_version
+        from packaging.specifiers import SpecifierSet
+
+        try:
+            importlib.import_module(package)
+        except ImportError:
+            raise ImportError(f"Package '{package}' is required but not installed.")
+
+        if version:
+            installed_version = get_version(package)
+            specifier = SpecifierSet(version)
+            if installed_version not in specifier:
+                raise ImportError(
+                    f"Package '{package}' version '{installed_version}' does not "
+                    f"satisfy the requirement '{package}{version}'."
+                )
+    else:
+        import subprocess
+        from packaging.specifiers import SpecifierSet
+
+        # Check if package is installed using the specified Python interpreter
+        try:
+            result = subprocess.run(
+                [python, "-c", f"import {package}"],
+                capture_output=True,
+                text=True,
+                timeout=10,
+            )
+            if result.returncode != 0:
+                raise ImportError(
+                    f"Package '{package}' is required but not installed in {python}."
+                )
+        except subprocess.TimeoutExpired:
+            raise ImportError(
+                f"Timeout while checking if package '{package}' is "
+                f"installed in {python}."
+            )
+        except FileNotFoundError:
+            raise ImportError(f"Python interpreter '{python}' not found.")
+
+        if version:
+            # Get the installed version
+            try:
+                version_cmd = (
+                    f"from importlib.metadata import version; "
+                    f"print(version('{package}'))"
+                )
+                result = subprocess.run(
+                    [python, "-c", version_cmd],
+                    capture_output=True,
+                    text=True,
+                    timeout=10,
+                )
+                if result.returncode != 0:
+                    raise ImportError(
+                        f"Failed to get version of package '{package}' "
+                        f"in {python}."
+                    )
+                installed_version = result.stdout.strip()
+                specifier = SpecifierSet(version)
+                if installed_version not in specifier:
+                    raise ImportError(
+                        f"Package '{package}' version '{installed_version}' "
+                        f"in {python} does not satisfy the requirement "
+                        f"'{package}{version}'."
+                    )
+            except subprocess.TimeoutExpired:
+                raise ImportError(
+                    f"Timeout while checking version of package '{package}' "
+                    f"in {python}."
+                )
 
 
 def run_command(
@@ -80,6 +159,7 @@ def run_command(
         kwargs["stdin"] = PIPE
 
     return_stdout = False
+    stdout_file = None
     if kwargs.get("stdout") is True:
         kwargs["stdout"] = PIPE
     elif kwargs.get("stdout") in ("RETURN", "return"):
@@ -88,7 +168,8 @@ def run_command(
     elif isinstance(kwargs.get("stdout"), (str, Path)):
         if isinstance(kwargs["stdout"], str):
             kwargs["stdout"] = Path(kwargs["stdout"])
-        kwargs["stdout"] = kwargs["stdout"].open("w")
+        stdout_file = kwargs["stdout"].open("w")
+        kwargs["stdout"] = stdout_file
         kwargs["close_fds"] = True
 
     if kwargs.get("stderr") is True:
@@ -96,6 +177,10 @@ def run_command(
     elif kwargs.get("stderr") in ("STDOUT", "stdout"):
         kwargs["stderr"] = STDOUT
 
+    # Enable line buffering for stdout/stderr when redirecting to files or pipes
+    if kwargs.get("bufsize") == 1:
+        kwargs.setdefault("universal_newlines", True)
+
     if fg:
         if kwargs.get("stdout") or kwargs.get("stderr"):
             raise ValueError(
@@ -120,6 +205,10 @@ def run_command(
     if fg or wait or return_stdout:
         rc = p.wait()
         if rc != 0:
+            if stdout_file:
+                stdout_file.close()
+            if return_stdout and p.stdout:
+                p.stdout.close()
             raise RuntimeError(
                 f"Failed to run command: rc={rc}\n"
                 f"Command (list): {cmd}\n"
@@ -127,7 +216,13 @@ def run_command(
             )
 
         if return_stdout:
-            return p.stdout.read().decode()  # type: ignore
+            try:
+                return p.stdout.read().decode()  # type: ignore
+            finally:
+                p.stdout.close()  # type: ignore
+
+        if stdout_file:
+            stdout_file.close()
 
         return p
 

{biopipen-0.34.6.dist-info → biopipen-0.34.26.dist-info}/METADATA

@@ -1,6 +1,6 @@
-Metadata-Version: 2.3
+Metadata-Version: 2.4
 Name: biopipen
-Version: 0.34.6
+Version: 0.34.26
 Summary: Bioinformatics processes/pipelines that can be run from `pipen run`
 License: MIT
 Author: pwwang
@@ -13,12 +13,15 @@ Classifier: Programming Language :: Python :: 3.10
 Classifier: Programming Language :: Python :: 3.11
 Classifier: Programming Language :: Python :: 3.12
 Classifier: Programming Language :: Python :: 3.13
+Classifier: Programming Language :: Python :: 3.14
+Provides-Extra: log2file
 Provides-Extra: runinfo
 Requires-Dist: datar[pandas] (>=0.15.8,<0.16.0)
 Requires-Dist: pipen-board[report] (>=0.17,<0.18)
 Requires-Dist: pipen-cli-run (>=0.15,<0.16)
 Requires-Dist: pipen-deprecated (>=0.0,<0.1)
 Requires-Dist: pipen-filters (>=0.15,<0.16)
+Requires-Dist: pipen-log2file (>=0.10.2,<0.11.0) ; extra == "log2file"
 Requires-Dist: pipen-poplog (>=0.3,<0.4)
 Requires-Dist: pipen-runinfo (>=0.9,<0.10) ; extra == "runinfo"
 Requires-Dist: pipen-verbose (>=0.14,<0.15)

{biopipen-0.34.6.dist-info → biopipen-0.34.26.dist-info}/RECORD

@@ -1,15 +1,15 @@
-biopipen/__init__.py,sha256=QHGuacl6zpfoE0OOXgLhITO4iY3VuSxXyJ6Kvvrpg-E,23
+biopipen/__init__.py,sha256=rIXEwO7es8MXz_mI7AEkKrxT65G5y0OrKNxLmmq9N2c,24
 biopipen/core/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 biopipen/core/config.py,sha256=edK5xnDhM8j27srDzsxubi934NMrglLoKrdcC8qsEPk,1069
-biopipen/core/config.toml,sha256=lZV_vbYWk6uqm19ZWJcsZCcSNqAdIfN2fOfamzxZpg4,2148
+biopipen/core/config.toml,sha256=hArI_h6iryrS5QMhfgGXdje7WGxj_DWcLjGjulHwBdQ,2264
 biopipen/core/defaults.py,sha256=yPeehPLk_OYCf71IgRVCWuQRxLAMixDF81Ium0HtPKI,344
-biopipen/core/filters.py,sha256=jrSlJ_x-ysx9YZ8NcfFfo1fPOITBp772-NtRxDyszas,9324
+biopipen/core/filters.py,sha256=MbGhByMJT0Vo4tKPHdFdpfd3sTsCxGgpjYZUKn7aXD0,9357
 biopipen/core/proc.py,sha256=jSdwm0IYjCnil0a3eYScKfq-JbTlVWwamT7Yjgaz-Ec,996
-biopipen/core/testing.py,sha256=OoKBRYWfNvhG_Iqic575U_TbX77C3AlALuAyqn2LvI0,3832
+biopipen/core/testing.py,sha256=383wr9WFAzlYSmH7_5_TjEei2VCo78WWGU71OdvLkjg,3923
 biopipen/ns/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 biopipen/ns/bam.py,sha256=hjUne8jCpOLaObF9u5EvVJDaiOHoEdvSb94Bm0Zg-fQ,13942
 biopipen/ns/bed.py,sha256=EqpSa7Hx6GImvJNghtV4uDo2PnPXeUt1Yq9AFWJP9_8,8159
-biopipen/ns/cellranger.py,sha256=rZKE3eHbxMrUzw3XJihAYOuq07OA6fmvbnJcwdHiLzs,5876
+biopipen/ns/cellranger.py,sha256=Hm8E-ONKN8_PmqUMUyEdaQEQi0oDAk9QtfPfRebArRQ,8067
 biopipen/ns/cellranger_pipeline.py,sha256=IjCCGpr1HB3R4nRyBcAgWmF0HsLYmHd6nGMn2-wkWOM,4075
 biopipen/ns/cnv.py,sha256=QzAearaaQG3n9lEyI79Nm9dUxWRov72XN8voRHcy74s,7810
 biopipen/ns/cnvkit.py,sha256=mxL-_jgFAAU9SD9gwSUC_CpFd1w3jt-fkbj_ZSZ-iHQ,31130
@@ -20,16 +20,16 @@ biopipen/ns/gsea.py,sha256=eMGj6lljdMds2Pzs3Mcab0lQPU4vtgRTKMhAsKXpxYo,9742
 biopipen/ns/misc.py,sha256=0jDPvpRL3EUIf2ipTjKqLTZgnallLWEjSxzTpS-geTQ,4355
 biopipen/ns/plot.py,sha256=N41_izb6zi-XArUly5WhLebapNXbTNSgGlOCCwtrDlY,18282
 biopipen/ns/protein.py,sha256=YJtlKoHI2p5yHdxKeQnNtm5QrbxDGOq1UXOdt_7tlTs,6391
-biopipen/ns/regulatory.py,sha256=gJjGVpJrdv-rg2t5UjK4AGuvtLNymaNYNvoD8PhlbvE,15929
+biopipen/ns/regulatory.py,sha256=WlnX_R8jEFyxCjk8mru5Qu5iCQJLzjMWiWGoc3gygzc,16221
 biopipen/ns/rnaseq.py,sha256=bKAa6friFWof4yDTWZQahm1MS-lrdetO1GqDKdfxXYc,7708
-biopipen/ns/scrna.py,sha256=ELhCbY2Vu8qHmDHlrI32gyaOxDO2ugFLz4WIV9kARfQ,144750
-biopipen/ns/scrna_metabolic_landscape.py,sha256=EwLMrsj_pTqvyAgtHLoishjQxCg_j8n5OofuTofUph0,22096
+biopipen/ns/scrna.py,sha256=-KuTXv9SKDUIre-GxBo4KAyhz2hxnPJJktgYv_nw-sA,168624
+biopipen/ns/scrna_metabolic_landscape.py,sha256=MoJSH4HITXLRCWhXi3h_ONjxpMSmQ684RMtFRJM57YA,22337
 biopipen/ns/snp.py,sha256=iXWrw7Lmhf4_ct57HGT7JGTClCXUD4sZ2FzOgsC2pTg,28123
 biopipen/ns/stats.py,sha256=DlPyK5Vsg6ZEkV9SDS3aAw21eXzvOHgqeZDkXPhg7go,20509
 biopipen/ns/tcgamaf.py,sha256=AFbUJIxiMSvsVY3RcHgjRFuMnNh2DG3Mr5slLNEyz6o,1455
-biopipen/ns/tcr.py,sha256=XvhbZcVzdJYCjGe61G_EitdRpZyDnyDsaMNPlyH5590,99676
+biopipen/ns/tcr.py,sha256=BBd9I7AK6aWtrTuM_85kui8ekDwsHOqCWyrq6iGP2Lw,109689
 biopipen/ns/vcf.py,sha256=zjOH2qiSJsHACLmBqV-Tew-mn-peZgvYLAWjTLh7uTI,23823
-biopipen/ns/web.py,sha256=8VY4Xsb8UrzS4IkGUX_84GQP1JG6NcTZrV7f9tA1tUI,5458
+biopipen/ns/web.py,sha256=4cmxV3LusyQbyjLL0l0wTbNtepaC__5_g5w1GnKY6wo,5749
 biopipen/reports/bam/CNAClinic.svelte,sha256=D4IxQcgDCPQZMbXog-aZP5iJEQTK2N4i0C60e_iXyfs,213
 biopipen/reports/bam/CNVpytor.svelte,sha256=SJdM0j8nUujDDTI13uJjJnpi2vokveK8VOXxyVQq7Yk,1252
 biopipen/reports/bam/ControlFREEC.svelte,sha256=OwN96RW0dN-gtQ1zWKbXYZCYkkrOC0RQmP3UG4x7zqU,837
@@ -51,16 +51,16 @@ biopipen/reports/scrna/DimPlots.svelte,sha256=ubIx8dgppzSB8WS_B4LN2T3bOTerP4Ck6o
 biopipen/reports/scrna/MarkersFinder.svelte,sha256=77rD1psj0VJykPDhfwS-B8mubvaasREAE6RYR2atTN4,444
 biopipen/reports/scrna/MetaMarkers.svelte,sha256=iIFRKjvVYrM1AtDWqq8UfeS8q23R8FKg2yepKAw2KSE,508
 biopipen/reports/scrna/RadarPlots.svelte,sha256=g_fp9d3vdnzk-egXPhkhhfWXOeG569Rj8rYLRIKmlLc,396
-biopipen/reports/scrna_metabolic_landscape/MetabolicFeatures.svelte,sha256=0AmtzoGZXh5OnxGtZd5NBItVd-BeuGk9mEIhhWa1ab8,2527
-biopipen/reports/scrna_metabolic_landscape/MetabolicPathwayActivity.svelte,sha256=RpIT1O3yiJEEqRcdS-ydYDghChQ0YLbD1RtSK2CQS_k,5654
-biopipen/reports/scrna_metabolic_landscape/MetabolicPathwayHeterogeneity.svelte,sha256=kW6AxFr7VnX9yVL74IbUEBuI7xRfbmnROXR6C7jRets,3009
+biopipen/reports/scrna_metabolic_landscape/MetabolicFeatures.svelte,sha256=4ruKluhHiKG1_sLnkCddYWIeVGXN6uzL_k2yl3jsS8k,2527
+biopipen/reports/scrna_metabolic_landscape/MetabolicPathwayActivity.svelte,sha256=nA35qYGDGdeFcMLqrP_T5VDpFKIA_p3wrnhiMQXlPLQ,5655
+biopipen/reports/scrna_metabolic_landscape/MetabolicPathwayHeterogeneity.svelte,sha256=hSVrDzVo1vEIh2XQTFL36hBpg_VCObXwKzeaCTZRWUU,3009
 biopipen/reports/snp/PlinkCallRate.svelte,sha256=u0JGUzBS6MJR38TrI7tz08E7uFJToFPeALinu-KLUOg,706
 biopipen/reports/snp/PlinkFreq.svelte,sha256=GCLQXL3OY4b8BDzaLZ3vHVrsv2lNm5657UaSdiimE9w,523
 biopipen/reports/snp/PlinkHWE.svelte,sha256=zlAbn0DLwGBka-X9-MQplpfYkQIanH-QhgQL2GtK0UA,490
 biopipen/reports/snp/PlinkHet.svelte,sha256=xUkzAPjaun8Zz9CwAiEP-sm0jzdOwq3D_EmmQcs7I0U,533
 biopipen/reports/snp/PlinkIBD.svelte,sha256=Uuoe_5X073tttL4Dh_eMoPf-TlaBteR8jP28k9A7lzU,495
 biopipen/reports/tcr/CDR3AAPhyschem.svelte,sha256=Szz3_sM86cBxkEboAVRvtb7_pCbX8A7MYOvzvQ81Rf4,1526
-biopipen/reports/tcr/ClonalStats.svelte,sha256=yxSzrEGYiq9pcAZRtSCuHB4KOq4A1I-sXJ73Wb4OEBQ,367
+biopipen/reports/tcr/ClonalStats.svelte,sha256=oLTOWNnwwvVIWTt9v6Sl7gYuPe2X68YwMxr1YA2ywA4,462
 biopipen/reports/tcr/CloneResidency.svelte,sha256=pzjkdGAhB7STxlXkTY5wnTT3plhkAPKMdGa6jwKuwoc,470
 biopipen/reports/tcr/Immunarch.svelte,sha256=jHOGUCWREaDNUf1_s6h9Kx_sp-y_dDRqY1rWrx0o0LM,433
 biopipen/reports/tcr/SampleDiversity.svelte,sha256=GrPUpQ6aJPtyQHoFL9ayG6knpW6yZznqwo0ZVZ2tMl4,5524
@@ -85,9 +85,9 @@ biopipen/scripts/bed/BedLiftOver.sh,sha256=gTIYN_KnNtPxKTjGdk4EYhwQ-kgPN5rO5YVvG
 biopipen/scripts/bed/BedtoolsIntersect.py,sha256=lFE2I8fgpjKCqOJM_qH5cs0l7dXv1c3w36eTXzujBj8,1736
 biopipen/scripts/bed/BedtoolsMakeWindows.py,sha256=HRYFwCOU_MzhmnwimhPH5jBnIftEXBdkpK5U9tCJ2Xw,1436
 biopipen/scripts/bed/BedtoolsMerge.py,sha256=d20obKLaJQALDNQ-Jz--OiL8klHGN44octkKx1ysJ04,381
-biopipen/scripts/cellranger/CellRangerCount.py,sha256=Te_tscWv_r2oTKPezN0zAkfuoQ3wwNqZC1IrsXjySYk,3307
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@@ -128,26 +128,27 @@ biopipen/scripts/protein/PDB2Fasta.py,sha256=HVsoRRpieobuPwemCz30_N0rJ7T4aGFTQKZ
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@@ -155,38 +156,40 @@ biopipen/scripts/scrna/ExprImputation-rmagic.R,sha256=ePgbMZ_3bKbeUrjsMdkdtBM_MS
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@@ -212,7 +215,8 @@ biopipen/scripts/tcgamaf/MafAddChr.py,sha256=uo1utaK3Df88aU7xubKw85Ni7W06md8bQlw
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@@ -237,7 +241,6 @@ biopipen/scripts/tcr/SampleDiversity.R,sha256=oipN4-2nQZe8bYjI0lZ0SvZ7T8GZ_FWkpk
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@@ -278,13 +281,12 @@ biopipen/scripts/web/GCloudStorageDownloadBucket.py,sha256=EnjEnCL52-X8v8d5tMvhJ
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-biopipen-0.34.6.dist-info/entry_points.txt,sha256=BYqHGBQJxyFDNLYqgH64ycI5PYwnlqwYcCFsMvJgzAU,653
-biopipen-0.34.6.dist-info/RECORD,,
+biopipen-0.34.26.dist-info/METADATA,sha256=TPW1_7FA3U6GvLyIihc7X1JhfP8FKnR63J9MH4TqpYQ,1123
+biopipen-0.34.26.dist-info/WHEEL,sha256=zp0Cn7JsFoX2ATtOhtaFYIiE2rmFAD4OcMhtUki8W3U,88
+biopipen-0.34.26.dist-info/entry_points.txt,sha256=BYqHGBQJxyFDNLYqgH64ycI5PYwnlqwYcCFsMvJgzAU,653
+biopipen-0.34.26.dist-info/RECORD,,

{biopipen-0.34.6.dist-info → biopipen-0.34.26.dist-info}/WHEEL

@@ -1,4 +1,4 @@
 Wheel-Version: 1.0
-Generator: poetry-core 2.1.3
+Generator: poetry-core 2.2.1
 Root-Is-Purelib: true
 Tag: py3-none-any