aiagents4pharma 1.19.1__py3-none-any.whl → 1.20.1__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (20) hide show
  1. aiagents4pharma/talk2biomodels/configs/config.yaml +5 -0
  2. aiagents4pharma/talk2scholars/agents/main_agent.py +129 -73
  3. aiagents4pharma/talk2scholars/agents/s2_agent.py +2 -1
  4. aiagents4pharma/talk2scholars/configs/agents/talk2scholars/main_agent/default.yaml +10 -31
  5. aiagents4pharma/talk2scholars/configs/agents/talk2scholars/s2_agent/default.yaml +16 -60
  6. aiagents4pharma/talk2scholars/state/state_talk2scholars.py +9 -8
  7. aiagents4pharma/talk2scholars/tests/test_integration.py +237 -0
  8. aiagents4pharma/talk2scholars/tests/test_main_agent.py +180 -0
  9. aiagents4pharma/talk2scholars/tests/test_s2_agent.py +138 -0
  10. aiagents4pharma/talk2scholars/tests/{test_langgraph.py → test_s2_tools.py} +79 -151
  11. aiagents4pharma/talk2scholars/tests/test_state.py +14 -0
  12. aiagents4pharma/talk2scholars/tools/s2/display_results.py +33 -8
  13. aiagents4pharma/talk2scholars/tools/s2/multi_paper_rec.py +10 -23
  14. aiagents4pharma/talk2scholars/tools/s2/search.py +10 -29
  15. aiagents4pharma/talk2scholars/tools/s2/single_paper_rec.py +4 -29
  16. {aiagents4pharma-1.19.1.dist-info → aiagents4pharma-1.20.1.dist-info}/METADATA +19 -3
  17. {aiagents4pharma-1.19.1.dist-info → aiagents4pharma-1.20.1.dist-info}/RECORD +20 -15
  18. {aiagents4pharma-1.19.1.dist-info → aiagents4pharma-1.20.1.dist-info}/LICENSE +0 -0
  19. {aiagents4pharma-1.19.1.dist-info → aiagents4pharma-1.20.1.dist-info}/WHEEL +0 -0
  20. {aiagents4pharma-1.19.1.dist-info → aiagents4pharma-1.20.1.dist-info}/top_level.txt +0 -0
{aiagents4pharma-1.19.1.dist-info → aiagents4pharma-1.20.1.dist-info}/RECORD RENAMED
@@ -7,6 +7,7 @@ aiagents4pharma/talk2biomodels/api/kegg.py,sha256=QzYDAfJ16E7tbHGxP8ZNWRizMkMRS_
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  aiagents4pharma/talk2biomodels/api/ols.py,sha256=qq0Qy-gJDxanQW-HfCChDsTQsY1M41ua8hMlTnfuzrA,2202
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  aiagents4pharma/talk2biomodels/api/uniprot.py,sha256=aPUAVBR7UYXDuuhDpKezAK2aTMzo-NxFYFq6C0W5u6U,1175
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  aiagents4pharma/talk2biomodels/configs/__init__.py,sha256=safyFKhkd5Wlirl9dMZIHWDLTpY2oLw9wjIM7ZtLIHk,88
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+ aiagents4pharma/talk2biomodels/configs/config.yaml,sha256=X0CMsnx6hHNvV04wsENQSGXadx0aKIy6mziSopVUdZI,116
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  aiagents4pharma/talk2biomodels/configs/agents/__init__.py,sha256=_ZoG8snICK2bidWtc2KOGs738LWg9_r66V9mOMnEb-E,71
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  aiagents4pharma/talk2biomodels/configs/agents/t2b_agent/__init__.py,sha256=-fAORvyFmG2iSvFOFDixmt9OTQRR58y89uhhu2EgbA8,46
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  aiagents4pharma/talk2biomodels/configs/agents/t2b_agent/default.yaml,sha256=pSViMKwKyMQDm8LzbfIaGdxph73iHYaXMiv5YOuxM7k,536
@@ -114,16 +115,16 @@ aiagents4pharma/talk2knowledgegraphs/utils/extractions/__init__.py,sha256=7gwwtf
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  aiagents4pharma/talk2knowledgegraphs/utils/extractions/pcst.py,sha256=m5p0yoJb7I19ua5yeQfXPf7c4r6S1XPwttsrM7Qoy94,9336
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  aiagents4pharma/talk2scholars/__init__.py,sha256=gphERyVKZHvOnMQsml7TIHlaIshHJ75R1J3FKExkfuY,120
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  aiagents4pharma/talk2scholars/agents/__init__.py,sha256=ykszlVGxz3egLHZAttlNoTPxIrnQJZYva_ssR8fwIFk,117
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- aiagents4pharma/talk2scholars/agents/main_agent.py,sha256=etPQUCjHtD-in-kD7Wg_UD6jRtCHj-mj41y03PYbAQM,4616
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- aiagents4pharma/talk2scholars/agents/s2_agent.py,sha256=0OlxNb8IEhd7JJNL8rRlr_U67iPgtGjbbAiJo9HFPdY,2737
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+ aiagents4pharma/talk2scholars/agents/main_agent.py,sha256=_spqbC2lS-pJ8lq59S7ViVT_aQK3jlA5vqlOx1Q7JOc,7177
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+ aiagents4pharma/talk2scholars/agents/s2_agent.py,sha256=QBsar2QrTgi9H5DniJzvbEUH3vKb_dlYojEcfsBXhPM,2765
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  aiagents4pharma/talk2scholars/configs/__init__.py,sha256=tf2gz8n7M4ko6xLdX_C925ELVIxoP6SgkPcbeh59ad4,151
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  aiagents4pharma/talk2scholars/configs/config.yaml,sha256=a3_jCFAmsVL6gZuvzoRe4jL94mQaSbp0CUXZDUtqhZA,254
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  aiagents4pharma/talk2scholars/configs/agents/__init__.py,sha256=yyh7PB2oY_JulnpSQCWS4wwCH_uzIdt47O2Ay48x_oU,75
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  aiagents4pharma/talk2scholars/configs/agents/talk2scholars/__init__.py,sha256=Tj4urOkjpu2cTlpJl0Fmr_18RZCR88vns-Gt-XquDzs,95
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  aiagents4pharma/talk2scholars/configs/agents/talk2scholars/main_agent/__init__.py,sha256=fqQQ-GlRcbzru2KmEk3oMma0R6_SzGM8dOXzYeU4oVA,46
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- aiagents4pharma/talk2scholars/configs/agents/talk2scholars/main_agent/default.yaml,sha256=77DLch0YDiGslm3HerBaEDqKj1jLqI_jusHFbCchJDU,1617
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+ aiagents4pharma/talk2scholars/configs/agents/talk2scholars/main_agent/default.yaml,sha256=Z85fv6orEpvdn-JGEmx0-45fsTJrlTRnqUYAhp1gZpY,679
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  aiagents4pharma/talk2scholars/configs/agents/talk2scholars/s2_agent/__init__.py,sha256=fqQQ-GlRcbzru2KmEk3oMma0R6_SzGM8dOXzYeU4oVA,46
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- aiagents4pharma/talk2scholars/configs/agents/talk2scholars/s2_agent/default.yaml,sha256=6mgBvjifpHJ20kLwuwWr56UoZqmyf1luZnNWlYR6gnc,3135
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+ aiagents4pharma/talk2scholars/configs/agents/talk2scholars/s2_agent/default.yaml,sha256=OCQ6wEh48qX73m49WJj2RHaws4kkKRUsGt6T2thDAzo,766
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  aiagents4pharma/talk2scholars/configs/app/__init__.py,sha256=JoSZV6N669kGMv5zLDszwf0ZjcRHx9TJfIqGhIIdPXE,70
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  aiagents4pharma/talk2scholars/configs/app/frontend/__init__.py,sha256=fqQQ-GlRcbzru2KmEk3oMma0R6_SzGM8dOXzYeU4oVA,46
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  aiagents4pharma/talk2scholars/configs/app/frontend/default.yaml,sha256=BX-J1zQyb0QJ7hcOFOnkJ8aWoWbjK4WE2VG7OZTOyKU,821
@@ -135,17 +136,21 @@ aiagents4pharma/talk2scholars/configs/tools/search/default.yaml,sha256=NznRVqB6E
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  aiagents4pharma/talk2scholars/configs/tools/single_paper_recommendation/__init__.py,sha256=fqQQ-GlRcbzru2KmEk3oMma0R6_SzGM8dOXzYeU4oVA,46
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  aiagents4pharma/talk2scholars/configs/tools/single_paper_recommendation/default.yaml,sha256=4_gTvdVc-hf9GNxBKMGQd72s5h53Zy09j9qeZ9Fys04,578
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  aiagents4pharma/talk2scholars/state/__init__.py,sha256=S6SxlszIMZSIMJehjevPF9sKyR-PAwWb5TEdo6xWXE8,103
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- aiagents4pharma/talk2scholars/state/state_talk2scholars.py,sha256=nwNRKdhoTXAtBGMMp6coMyUCaQVOnoGNqyjpKKw_FVM,998
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+ aiagents4pharma/talk2scholars/state/state_talk2scholars.py,sha256=6LwGCP1yluxcAf1PyWl7LaXEvxbaJ2-b2Nrxu4Z_KI0,978
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  aiagents4pharma/talk2scholars/tests/__init__.py,sha256=U3PsTiUZaUBD1IZanFGkDIOdFieDVJtGKQ5-woYUo8c,45
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- aiagents4pharma/talk2scholars/tests/test_langgraph.py,sha256=36tWBmdewCZC8Yw1CCIpJxusGLCy21SVHhG1tR5C3TU,9605
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+ aiagents4pharma/talk2scholars/tests/test_integration.py,sha256=JWRoXkYjB6mKjiGvzoqSjAFXX_L8s2dP67MGS9dk6Rs,7721
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+ aiagents4pharma/talk2scholars/tests/test_main_agent.py,sha256=_XPnyveZoBOgrrV_2ws8CLWAX338xBlyh1Zs6xoZKpk,6171
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+ aiagents4pharma/talk2scholars/tests/test_s2_agent.py,sha256=0VtCZ0C_4WyF5t7i8Cmv7P1FakmDTe6YfXNriFAiGEQ,4645
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+ aiagents4pharma/talk2scholars/tests/test_s2_tools.py,sha256=OU2ArjF07J1jKz4dLnhQ1RxNXgNBhgMqglxLIvKcXuk,7496
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+ aiagents4pharma/talk2scholars/tests/test_state.py,sha256=_iHXvoZnU_eruf8l1sQKBSCIVnxNkH_9VzkVtZZA6bY,384
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  aiagents4pharma/talk2scholars/tools/__init__.py,sha256=YudBDRwaEzDnAcpxGZvEOfyh5-6xd51CTvTKTkywgXw,68
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  aiagents4pharma/talk2scholars/tools/s2/__init__.py,sha256=9RQH3efTj6qkXk0ICKSc7Mzpkitt4gRGsQ1pGPrrREU,181
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- aiagents4pharma/talk2scholars/tools/s2/display_results.py,sha256=B8JJGohi1Eyx8C3MhO_SiyQP3R6hPyUKJOAzcHmq3FU,584
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- aiagents4pharma/talk2scholars/tools/s2/multi_paper_rec.py,sha256=0Y3q8TkF_Phng9L7g1kk9Fhyit9UNitWurp03H0GZv8,4455
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- aiagents4pharma/talk2scholars/tools/s2/search.py,sha256=CcgFN7YuuQ9Vl1DJcldnnvPrswABKjNxeauK1rABps8,4176
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- aiagents4pharma/talk2scholars/tools/s2/single_paper_rec.py,sha256=irS-igdG8BZbVb0Z4VlIjzsyBlUfREd0v0_RlUM-0_U,4994
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- aiagents4pharma-1.19.1.dist-info/LICENSE,sha256=IcIbyB1Hyk5ZDah03VNQvJkbNk2hkBCDqQ8qtnCvB4Q,1077
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- aiagents4pharma-1.19.1.dist-info/METADATA,sha256=lVPldiDbObNVA1dfpFA8wnLjh-4s3oX8O5eZSkApcL4,7053
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- aiagents4pharma-1.19.1.dist-info/WHEEL,sha256=In9FTNxeP60KnTkGw7wk6mJPYd_dQSjEZmXdBdMCI-8,91
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- aiagents4pharma-1.19.1.dist-info/top_level.txt,sha256=-AH8rMmrSnJtq7HaAObS78UU-cTCwvX660dSxeM7a0A,16
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- aiagents4pharma-1.19.1.dist-info/RECORD,,
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+ aiagents4pharma/talk2scholars/tools/s2/display_results.py,sha256=Aap3P-9i80TDarkEZX0S62rzsVZw0ftzgUppK67rOhI,1446
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+ aiagents4pharma/talk2scholars/tools/s2/multi_paper_rec.py,sha256=7GrMaZ15zLSmBvmek9NCATM4-O6BXuxa5Pwd9qJ6ygU,3887
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+ aiagents4pharma/talk2scholars/tools/s2/search.py,sha256=fF8i2s8ikF0qdM_c7KSAQvguG9Hjq0s2bPvoyLdx5wA,3311
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+ aiagents4pharma/talk2scholars/tools/s2/single_paper_rec.py,sha256=Z3NQgf3hHcPSisYJnbEErsyGFZPgad8CdaWe4XxiOgs,3978
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+ aiagents4pharma-1.20.1.dist-info/LICENSE,sha256=IcIbyB1Hyk5ZDah03VNQvJkbNk2hkBCDqQ8qtnCvB4Q,1077
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+ aiagents4pharma-1.20.1.dist-info/METADATA,sha256=b9jMg2iAMjZ0xAGOF-qrttUhkcPNqV3nyMRWgQUib6M,7757
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+ aiagents4pharma-1.20.1.dist-info/WHEEL,sha256=In9FTNxeP60KnTkGw7wk6mJPYd_dQSjEZmXdBdMCI-8,91
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+ aiagents4pharma-1.20.1.dist-info/top_level.txt,sha256=-AH8rMmrSnJtq7HaAObS78UU-cTCwvX660dSxeM7a0A,16
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+ aiagents4pharma-1.20.1.dist-info/RECORD,,