EvoScientist 0.0.1.dev2__py3-none-any.whl

EvoScientist/skills/accelerate/references/megatron-integration.md

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+# Megatron Integration with Accelerate
+
+## Overview
+
+Accelerate supports Megatron-LM for massive model training with tensor parallelism and pipeline parallelism.
+
+**Megatron capabilities**:
+- **Tensor Parallelism (TP)**: Split layers across GPUs
+- **Pipeline Parallelism (PP)**: Split model depth across GPUs
+- **Data Parallelism (DP)**: Replicate model across GPU groups
+- **Sequence Parallelism**: Split sequences for long contexts
+
+## Setup
+
+### Install Megatron-LM
+
+```bash
+# Clone Megatron-LM repository
+git clone https://github.com/NVIDIA/Megatron-LM.git
+cd Megatron-LM
+pip install -e .
+
+# Install Apex (NVIDIA optimizations)
+git clone https://github.com/NVIDIA/apex
+cd apex
+pip install -v --disable-pip-version-check --no-cache-dir --no-build-isolation \
+  --config-settings "--build-option=--cpp_ext" --config-settings "--build-option=--cuda_ext" ./
+```
+
+### Accelerate Configuration
+
+```bash
+accelerate config
+```
+
+**Questions**:
+```
+In which compute environment are you running?
+> This machine
+
+Which type of machine are you using?
+> Multi-GPU
+
+How many different machines will you use?
+> 1
+
+Do you want to use DeepSpeed/FSDP?
+> No
+
+Do you want to use Megatron-LM?
+> Yes
+
+What is the Tensor Parallelism degree? [1-8]
+> 2
+
+Do you want to enable Sequence Parallelism?
+> No
+
+What is the Pipeline Parallelism degree? [1-8]
+> 2
+
+What is the Data Parallelism degree? [1-8]
+> 2
+
+Where to perform activation checkpointing? ['SELECTIVE', 'FULL', 'NONE']
+> SELECTIVE
+
+Where to perform activation partitioning? ['SEQUENTIAL', 'UNIFORM']
+> SEQUENTIAL
+```
+
+**Generated config** (`~/.cache/huggingface/accelerate/default_config.yaml`):
+```yaml
+compute_environment: LOCAL_MACHINE
+distributed_type: MEGATRON_LM
+downcast_bf16: 'no'
+machine_rank: 0
+main_training_function: main
+megatron_lm_config:
+  megatron_lm_gradient_clipping: 1.0
+  megatron_lm_learning_rate_decay_iters: 320000
+  megatron_lm_num_micro_batches: 1
+  megatron_lm_pp_degree: 2
+  megatron_lm_recompute_activations: true
+  megatron_lm_sequence_parallelism: false
+  megatron_lm_tp_degree: 2
+mixed_precision: bf16
+num_machines: 1
+num_processes: 8
+rdzv_backend: static
+same_network: true
+tpu_env: []
+tpu_use_cluster: false
+tpu_use_sudo: false
+use_cpu: false
+```
+
+## Parallelism Strategies
+
+### Tensor Parallelism (TP)
+
+**Splits each transformer layer across GPUs**:
+
+```python
+# Layer split across 2 GPUs
+# GPU 0: First half of attention heads
+# GPU 1: Second half of attention heads
+
+# Each GPU computes partial outputs
+# All-reduce combines results
+```
+
+**TP degree recommendations**:
+- **TP=1**: No tensor parallelism (single GPU per layer)
+- **TP=2**: 2 GPUs per layer (good for 7-13B models)
+- **TP=4**: 4 GPUs per layer (good for 20-40B models)
+- **TP=8**: 8 GPUs per layer (good for 70B+ models)
+
+**Benefits**:
+- Reduces memory per GPU
+- All-reduce communication (fast)
+
+**Drawbacks**:
+- Requires fast inter-GPU bandwidth (NVLink)
+- Communication overhead per layer
+
+### Pipeline Parallelism (PP)
+
+**Splits model depth across GPUs**:
+
+```python
+# 12-layer model, PP=4
+# GPU 0: Layers 0-2
+# GPU 1: Layers 3-5
+# GPU 2: Layers 6-8
+# GPU 3: Layers 9-11
+```
+
+**PP degree recommendations**:
+- **PP=1**: No pipeline parallelism
+- **PP=2**: 2 pipeline stages (good for 20-40B models)
+- **PP=4**: 4 pipeline stages (good for 70B+ models)
+- **PP=8**: 8 pipeline stages (good for 175B+ models)
+
+**Benefits**:
+- Linear memory reduction (4× PP = 4× less memory)
+- Works across nodes (slower interconnect OK)
+
+**Drawbacks**:
+- Pipeline bubbles (idle time)
+- Requires micro-batching
+
+### Data Parallelism (DP)
+
+**Replicates model across GPU groups**:
+
+```python
+# 8 GPUs, TP=2, PP=2, DP=2
+# Group 0 (GPUs 0-3): Full model replica
+# Group 1 (GPUs 4-7): Full model replica
+```
+
+**DP degree**:
+- `DP = total_gpus / (TP × PP)`
+- Example: 8 GPUs, TP=2, PP=2 → DP=2
+
+**Benefits**:
+- Increases throughput
+- Scales batch size
+
+### Sequence Parallelism
+
+**Splits long sequences across GPUs** (extends TP):
+
+```python
+# 8K sequence, TP=2, Sequence Parallel=True
+# GPU 0: Tokens 0-4095
+# GPU 1: Tokens 4096-8191
+```
+
+**Benefits**:
+- Enables very long sequences (100K+ tokens)
+- Reduces activation memory
+
+**Requirements**:
+- Must use with TP > 1
+- RoPE/ALiBi position encodings work best
+
+## Accelerate Code Example
+
+### Basic Setup
+
+```python
+from accelerate import Accelerator
+from accelerate.utils import MegatronLMPlugin
+
+# Configure Megatron
+megatron_plugin = MegatronLMPlugin(
+    tp_degree=2,              # Tensor parallelism degree
+    pp_degree=2,              # Pipeline parallelism degree
+    num_micro_batches=4,      # Micro-batches for pipeline
+    gradient_clipping=1.0,    # Gradient clipping value
+    sequence_parallelism=False,  # Enable sequence parallelism
+    recompute_activations=True,  # Activation checkpointing
+    use_distributed_optimizer=True,  # Distributed optimizer
+    custom_prepare_model_function=None,  # Custom model prep
+)
+
+# Initialize accelerator
+accelerator = Accelerator(
+    mixed_precision='bf16',
+    megatron_lm_plugin=megatron_plugin
+)
+
+# Prepare model and optimizer
+model, optimizer, train_dataloader = accelerator.prepare(
+    model, optimizer, train_dataloader
+)
+
+# Training loop (same as DDP!)
+for batch in train_dataloader:
+    optimizer.zero_grad()
+    outputs = model(**batch)
+    loss = outputs.loss
+    accelerator.backward(loss)
+    optimizer.step()
+```
+
+### Full Training Script
+
+```python
+import torch
+from accelerate import Accelerator
+from accelerate.utils import MegatronLMPlugin
+from transformers import GPT2Config, GPT2LMHeadModel
+
+def main():
+    # Megatron configuration
+    megatron_plugin = MegatronLMPlugin(
+        tp_degree=2,
+        pp_degree=2,
+        num_micro_batches=4,
+        gradient_clipping=1.0,
+    )
+
+    accelerator = Accelerator(
+        mixed_precision='bf16',
+        gradient_accumulation_steps=8,
+        megatron_lm_plugin=megatron_plugin
+    )
+
+    # Model
+    config = GPT2Config(
+        n_layer=24,
+        n_head=16,
+        n_embd=1024,
+    )
+    model = GPT2LMHeadModel(config)
+
+    # Optimizer
+    optimizer = torch.optim.AdamW(model.parameters(), lr=6e-4)
+
+    # Prepare
+    model, optimizer, train_loader = accelerator.prepare(
+        model, optimizer, train_loader
+    )
+
+    # Training loop
+    for epoch in range(num_epochs):
+        for batch in train_loader:
+            with accelerator.accumulate(model):
+                outputs = model(**batch)
+                loss = outputs.loss
+                accelerator.backward(loss)
+                optimizer.step()
+                optimizer.zero_grad()
+
+        # Save checkpoint
+        accelerator.wait_for_everyone()
+        accelerator.save_state(f'checkpoint-epoch-{epoch}')
+
+if __name__ == '__main__':
+    main()
+```
+
+### Launch Command
+
+```bash
+# 8 GPUs, TP=2, PP=2, DP=2
+accelerate launch --multi_gpu --num_processes 8 train.py
+
+# Multi-node (2 nodes, 8 GPUs each)
+# Node 0
+accelerate launch --multi_gpu --num_processes 16 \
+  --num_machines 2 --machine_rank 0 \
+  --main_process_ip $MASTER_ADDR \
+  --main_process_port 29500 \
+  train.py
+
+# Node 1
+accelerate launch --multi_gpu --num_processes 16 \
+  --num_machines 2 --machine_rank 1 \
+  --main_process_ip $MASTER_ADDR \
+  --main_process_port 29500 \
+  train.py
+```
+
+## Activation Checkpointing
+
+**Reduces memory by recomputing activations**:
+
+```python
+megatron_plugin = MegatronLMPlugin(
+    recompute_activations=True,      # Enable checkpointing
+    checkpoint_num_layers=1,         # Checkpoint every N layers
+    distribute_checkpointed_activations=True,  # Distribute across TP
+    partition_activations=True,      # Partition in PP
+    check_for_nan_in_loss_and_grad=True,  # Stability check
+)
+```
+
+**Strategies**:
+- `SELECTIVE`: Checkpoint transformer blocks only
+- `FULL`: Checkpoint all layers
+- `NONE`: No checkpointing
+
+**Memory savings**: 30-50% with 10-15% slowdown
+
+## Distributed Optimizer
+
+**Shards optimizer state across DP ranks**:
+
+```python
+megatron_plugin = MegatronLMPlugin(
+    use_distributed_optimizer=True,  # Enable sharded optimizer
+)
+```
+
+**Benefits**:
+- Reduces optimizer memory by DP degree
+- Example: DP=4 → 4× less optimizer memory per GPU
+
+**Compatible with**:
+- AdamW, Adam, SGD
+- Mixed precision training
+
+## Performance Tuning
+
+### Micro-Batch Size
+
+```python
+# Pipeline parallelism requires micro-batching
+megatron_plugin = MegatronLMPlugin(
+    pp_degree=4,
+    num_micro_batches=16,  # 16 micro-batches per pipeline
+)
+
+# Effective batch = num_micro_batches × micro_batch_size × DP
+# Example: 16 × 2 × 4 = 128
+```
+
+**Recommendations**:
+- More micro-batches → less pipeline bubble
+- Typical: 4-16 micro-batches
+
+### Sequence Length
+
+```python
+# For long sequences, enable sequence parallelism
+megatron_plugin = MegatronLMPlugin(
+    tp_degree=4,
+    sequence_parallelism=True,  # Required: TP > 1
+)
+
+# Enables sequences up to TP × normal limit
+# Example: TP=4, 8K normal → 32K with sequence parallel
+```
+
+### GPU Topology
+
+**NVLink required for TP**:
+```bash
+# Check NVLink topology
+nvidia-smi topo -m
+
+# Good topology (NVLink between all GPUs)
+# GPU0 - GPU1: NV12 (fast)
+# GPU0 - GPU2: NV12 (fast)
+
+# Bad topology (PCIe only)
+# GPU0 - GPU4: PHB (slow, avoid TP across these)
+```
+
+**Recommendations**:
+- **TP**: Within same node (NVLink)
+- **PP**: Across nodes (slower interconnect OK)
+- **DP**: Any topology
+
+## Model Size Guidelines
+
+| Model Size | GPUs | TP | PP | DP | Micro-Batches |
+|------------|------|----|----|----|--------------|
+| 7B | 8 | 1 | 1 | 8 | 1 |
+| 13B | 8 | 2 | 1 | 4 | 1 |
+| 20B | 16 | 4 | 1 | 4 | 1 |
+| 40B | 32 | 4 | 2 | 4 | 4 |
+| 70B | 64 | 8 | 2 | 4 | 8 |
+| 175B | 128 | 8 | 4 | 4 | 16 |
+
+**Assumptions**: BF16, 2K sequence length, A100 80GB
+
+## Checkpointing
+
+### Save Checkpoint
+
+```python
+# Save full model state
+accelerator.save_state('checkpoint-1000')
+
+# Megatron saves separate files per rank
+# checkpoint-1000/
+#   pytorch_model_tp_0_pp_0.bin
+#   pytorch_model_tp_0_pp_1.bin
+#   pytorch_model_tp_1_pp_0.bin
+#   pytorch_model_tp_1_pp_1.bin
+#   optimizer_tp_0_pp_0.bin
+#   ...
+```
+
+### Load Checkpoint
+
+```python
+# Resume training
+accelerator.load_state('checkpoint-1000')
+
+# Automatically loads correct shard per rank
+```
+
+### Convert to Standard PyTorch
+
+```bash
+# Merge Megatron checkpoint to single file
+python merge_megatron_checkpoint.py \
+  --checkpoint-dir checkpoint-1000 \
+  --output pytorch_model.bin
+```
+
+## Common Issues
+
+### Issue: OOM with Pipeline Parallelism
+
+**Solution**: Increase micro-batches
+```python
+megatron_plugin = MegatronLMPlugin(
+    pp_degree=4,
+    num_micro_batches=16,  # Increase from 4
+)
+```
+
+### Issue: Slow Training
+
+**Check 1**: Pipeline bubbles (PP too high)
+```python
+# Reduce PP, increase TP
+tp_degree=4  # Increase
+pp_degree=2  # Decrease
+```
+
+**Check 2**: Micro-batch size too small
+```python
+num_micro_batches=8  # Increase
+```
+
+### Issue: NVLink Not Detected
+
+```bash
+# Verify NVLink
+nvidia-smi nvlink -s
+
+# If no NVLink, avoid TP > 1
+# Use PP or DP instead
+```
+
+## Resources
+
+- Megatron-LM: https://github.com/NVIDIA/Megatron-LM
+- Accelerate Megatron docs: https://huggingface.co/docs/accelerate/usage_guides/megatron_lm
+- Paper: "Megatron-LM: Training Multi-Billion Parameter Language Models Using Model Parallelism"
+- NVIDIA Apex: https://github.com/NVIDIA/apex