sdc-qrf 0.1.3 → 0.3.1

package/src/converter/__tests__/resources/questionnaire_response_fce/phq_2_phq_9.json

@@ -0,0 +1,193 @@
+{
+  "authored": "2023-04-06T02:33:05Z",
+  "encounter": {
+    "id": "e133b999-9e91-4ebd-967e-450bad770682",
+    "resourceType": "Encounter"
+  },
+  "id": "846558b9-4c03-4af6-a258-62b0390633e2",
+  "item": [
+    {
+      "answer": [
+        {
+          "value": {
+            "dateTime": "2023-04-06T02:32:40+00:00"
+          }
+        }
+      ],
+      "linkId": "dateTime"
+    },
+    {
+      "answer": [
+        {
+          "value": {
+            "string": "683e382b-fed4-433e-9b6d-a847a7953bc0"
+          }
+        }
+      ],
+      "linkId": "patientId"
+    },
+    {
+      "answer": [
+        {
+          "value": {
+            "string": "Emily Nguyen"
+          }
+        }
+      ],
+      "linkId": "patientName"
+    },
+    {
+      "item": [
+        {
+          "answer": [
+            {
+              "value": {
+                "Coding": {
+                  "code": "LA6568-5",
+                  "display": "Not at all",
+                  "system": "http://loinc.org"
+                }
+              }
+            }
+          ],
+          "linkId": "44250-9"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "Coding": {
+                  "code": "LA6569-3",
+                  "display": "Several days",
+                  "system": "http://loinc.org"
+                }
+              }
+            }
+          ],
+          "linkId": "44255-8"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "Coding": {
+                  "code": "LA6570-1",
+                  "display": "More than half the days",
+                  "system": "http://loinc.org"
+                }
+              }
+            }
+          ],
+          "linkId": "44259-0"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "Coding": {
+                  "code": "LA6571-9",
+                  "display": "Nearly every day",
+                  "system": "http://loinc.org"
+                }
+              }
+            }
+          ],
+          "linkId": "44254-1"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "Coding": {
+                  "code": "LA6570-1",
+                  "display": "More than half the days",
+                  "system": "http://loinc.org"
+                }
+              }
+            }
+          ],
+          "linkId": "44251-7"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "Coding": {
+                  "code": "LA6569-3",
+                  "display": "Several days",
+                  "system": "http://loinc.org"
+                }
+              }
+            }
+          ],
+          "linkId": "44258-2"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "Coding": {
+                  "code": "LA6568-5",
+                  "display": "Not at all",
+                  "system": "http://loinc.org"
+                }
+              }
+            }
+          ],
+          "linkId": "44252-5"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "Coding": {
+                  "code": "LA6569-3",
+                  "display": "Several days",
+                  "system": "http://loinc.org"
+                }
+              }
+            }
+          ],
+          "linkId": "44253-3"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "Coding": {
+                  "code": "LA6570-1",
+                  "display": "More than half the days",
+                  "system": "http://loinc.org"
+                }
+              }
+            }
+          ],
+          "linkId": "44260-8"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "integer": 12
+              }
+            }
+          ],
+          "linkId": "phq9-total-score"
+        }
+      ],
+      "linkId": "phq2phq9"
+    }
+  ],
+  "meta": {
+    "createdAt": "2023-04-06T02:32:41.569773Z",
+    "lastUpdated": "2023-04-06T02:33:06.758734Z",
+    "versionId": "20508"
+  },
+  "questionnaire": "phq2phq9",
+  "resourceType": "QuestionnaireResponse",
+  "source": {
+    "id": "683e382b-fed4-433e-9b6d-a847a7953bc0",
+    "resourceType": "Patient"
+  },
+  "status": "completed"
+}

package/src/converter/__tests__/resources/questionnaire_response_fce/physicalexam.json

@@ -0,0 +1,187 @@
+{
+  "questionnaire": "physical-exam",
+  "meta": {
+    "lastUpdated": "2023-04-06T02:05:52.434771Z",
+    "createdAt": "2023-04-06T02:05:32.668369Z",
+    "versionId": "20470"
+  },
+  "encounter": {
+    "id": "e133b999-9e91-4ebd-967e-450bad770682",
+    "resourceType": "Encounter"
+  },
+  "item": [
+    {
+      "item": [
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "Well nourished, well developed, awake and alert, resting comfortably in no acute distress, cooperative on exam"
+              }
+            }
+          ],
+          "linkId": "general"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "NCAT, PERRL, normal conjunctivae, nonicteric sclerae, bilateral EAC/TM clear, no nasal discharge, OP clear, moist mucous membranes"
+              }
+            }
+          ],
+          "linkId": "heent"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "Supple, normal ROM, no lymphadenopathy/masses, nontender"
+              }
+            }
+          ],
+          "linkId": "neck"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "RRR, normal S1/S2, no murmurs/gallops/rub"
+              }
+            }
+          ],
+          "linkId": "cardiovascular"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "No respiratory distress, lungs CTAB: no rales, rhonchi, or wheeze"
+              }
+            }
+          ],
+          "linkId": "pulmonary"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "Soft and non-tender with no guarding or rebound; +BS normoactive, no tympany on auscultation"
+              }
+            }
+          ],
+          "linkId": "abdominal"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "Normal ROM of UE and LE, normal bulk and tone,"
+              }
+            }
+          ],
+          "linkId": "musculoskeletal"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "Pulses intact with normal cap refill, no LE pitting edema or calf tenderness"
+              }
+            }
+          ],
+          "linkId": "extremities"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "AAOx3, converses normally. CN II - XII grossly intact. Gait and coordination intact. 5+ BL UE/LE strength, no gross motor or sensory defects"
+              }
+            }
+          ],
+          "linkId": "neurologic"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "Normal mood and affect. Judgement/competence is appropriate"
+              }
+            }
+          ],
+          "linkId": "psychiatric"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "Warm, dry, and intact. No rashes, dermatoses, petechiae, or lesions"
+              }
+            }
+          ],
+          "linkId": "skin"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "Normal sensation bilaterally on soles of feet with 10g monofilament"
+              }
+            }
+          ],
+          "linkId": "monofilament"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "The chest wall is symmetric, without deformity, and is atraumatic in appearance"
+              }
+            }
+          ],
+          "linkId": "chest"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "External genitalia without erythema, exudate or discharge"
+              }
+            }
+          ],
+          "linkId": "genitourinary-female"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "Normal external anus and normal tone. No palpable masses, normal mucosa, brown stool. Hemoccult negative"
+              }
+            }
+          ],
+          "linkId": "rectal"
+        },
+        {
+          "answer": [
+            {
+              "value": {
+                "string": "No enlarged lymph nodes of occipital, pre- and postauricular, submandibular, anterior or posterior cervical, or supraclavicular identified"
+              }
+            }
+          ],
+          "linkId": "lymphatic"
+        }
+      ],
+      "linkId": "physical-exam-group"
+    }
+  ],
+  "resourceType": "QuestionnaireResponse",
+  "source": {
+    "id": "683e382b-fed4-433e-9b6d-a847a7953bc0",
+    "resourceType": "Patient"
+  },
+  "status": "completed",
+  "id": "288fd914-b836-47dd-863a-e7d86a923f28",
+  "authored": "2023-04-06T02:05:51Z"
+}

package/src/converter/__tests__/resources/questionnaire_response_fce/practitioner.json

@@ -0,0 +1,57 @@
+{
+  "authored": "2023-04-05T06:09:09Z",
+  "id": "cedd0c3e-be1a-4c1b-92af-351ed76fe41e",
+  "item": [
+    {
+      "answer": [
+        {
+          "value": {
+            "string": "Patel"
+          }
+        }
+      ],
+      "linkId": "last-name"
+    },
+    {
+      "answer": [
+        {
+          "value": {
+            "string": "Sanjay"
+          }
+        }
+      ],
+      "linkId": "first-name"
+    },
+    {
+      "answer": [
+        {
+          "value": {
+            "string": "Kumar"
+          }
+        }
+      ],
+      "linkId": "middle-name"
+    },
+    {
+      "answer": [
+        {
+          "value": {
+            "Coding": {
+              "code": "394579002",
+              "display": "Cardiology",
+              "system": "http://snomed.info/sct"
+            }
+          }
+        }
+      ],
+      "linkId": "specialty"
+    }
+  ],
+  "meta": {
+    "createdAt": "2023-04-05T06:09:10.640955Z",
+    "lastUpdated": "2023-04-05T06:09:10.640955Z",
+    "versionId": "20415"
+  },
+  "resourceType": "QuestionnaireResponse",
+  "status": "completed"
+}

package/src/converter/__tests__/resources/questionnaire_response_fce/reference_answer_with_assoc.json

@@ -0,0 +1,147 @@
+{
+    "authored": "2023-04-05T06:27:57Z",
+    "id": "cf6d9d4b-bfcd-463f-9d26-b6769c2a3fc3",
+    "item": [
+        {
+            "answer": [
+                {
+                    "value": {
+                        "string": "683e382b-fed4-433e-9b6d-a847a7953bc0"
+                    }
+                }
+            ],
+            "linkId": "patientId"
+        },
+        {
+            "answer": [
+                {
+                    "value": {
+                        "string": "Emily Nguyen"
+                    }
+                }
+            ],
+            "linkId": "patientName"
+        },
+        {
+            "answer": [
+                {
+                    "value": {
+                        "Reference": {
+                            "display": "Sanjay Patel - Cardiology",
+                            "id": "429e6a55-8a64-4ede-ad12-1206522253eb",
+                            "resource": {
+                                "healthcareService": [
+                                    {
+                                        "display": "The first appointment",
+                                        "id": "consultation",
+                                        "resourceType": "HealthcareService"
+                                    },
+                                    {
+                                        "display": "A follow up visit",
+                                        "id": "follow-up",
+                                        "resourceType": "HealthcareService"
+                                    }
+                                ],
+                                "id": "429e6a55-8a64-4ede-ad12-1206522253eb",
+                                "meta": {
+                                    "createdAt": "2023-04-05T06:09:11.092359Z",
+                                    "lastUpdated": "2023-04-05T06:09:11.092359Z",
+                                    "versionId": "20418"
+                                },
+                                "practitioner": {
+                                    "id": "42e9bdc0-4fe6-4b8d-a6a5-fcb68f1fe836",
+                                    "resource": {
+                                        "id": "42e9bdc0-4fe6-4b8d-a6a5-fcb68f1fe836",
+                                        "meta": {
+                                            "createdAt": "2023-04-05T06:09:11.092359Z",
+                                            "lastUpdated": "2023-04-05T06:09:11.092359Z",
+                                            "versionId": "20416"
+                                        },
+                                        "name": [
+                                            {
+                                                "family": "Patel",
+                                                "given": ["Sanjay", "Kumar"]
+                                            }
+                                        ],
+                                        "resourceType": "Practitioner"
+                                    },
+                                    "resourceType": "Practitioner"
+                                },
+                                "resourceType": "PractitionerRole",
+                                "specialty": [
+                                    {
+                                        "coding": [
+                                            {
+                                                "code": "394579002",
+                                                "display": "Cardiology",
+                                                "system": "http://snomed.info/sct"
+                                            }
+                                        ]
+                                    }
+                                ]
+                            },
+                            "resourceType": "PractitionerRole"
+                        }
+                    }
+                }
+            ],
+            "linkId": "practitioner-role"
+        },
+        {
+            "answer": [
+                {
+                    "value": {
+                        "Coding": {
+                            "code": "consultation",
+                            "display": "The first appointment",
+                            "system": "http://fhir.org/guides/argonaut-scheduling/CodeSystem/visit-type"
+                        }
+                    }
+                }
+            ],
+            "linkId": "service"
+        },
+        {
+            "answer": [
+                {
+                    "value": {
+                        "date": "2023-04-26"
+                    }
+                }
+            ],
+            "linkId": "date"
+        },
+        {
+            "item": [
+                {
+                    "answer": [
+                        {
+                            "value": {
+                                "time": "15:00:00"
+                            }
+                        }
+                    ],
+                    "linkId": "start-time"
+                },
+                {
+                    "answer": [
+                        {
+                            "value": {
+                                "time": "16:00:00"
+                            }
+                        }
+                    ],
+                    "linkId": "end-time"
+                }
+            ],
+            "linkId": "Time period"
+        }
+    ],
+    "meta": {
+        "createdAt": "2023-04-05T06:27:58.499391Z",
+        "lastUpdated": "2023-04-05T06:27:58.499391Z",
+        "versionId": "20420"
+    },
+    "resourceType": "QuestionnaireResponse",
+    "status": "completed"
+}