scientify 1.10.3 → 1.12.0

package/dist/src/commands/metabolism-status.js

@@ -0,0 +1,100 @@
+import * as fs from "node:fs";
+import * as path from "node:path";
+import * as os from "node:os";
+const OPENCLAW_HOME = path.join(os.homedir(), ".openclaw");
+/**
+ * Find the research project workspace for the current agent context.
+ * In a Feishu group bound to a project agent, the workspace is at
+ * ~/.openclaw/workspace-research-{id}/
+ */
+function findProjectWorkspace() {
+    // Read openclaw.json to find research agents
+    const configPath = path.join(OPENCLAW_HOME, "openclaw.json");
+    let config;
+    try {
+        config = JSON.parse(fs.readFileSync(configPath, "utf-8"));
+    }
+    catch {
+        return null;
+    }
+    const agents = config.agents?.list ?? [];
+    const researchAgents = agents.filter((a) => a.id.startsWith("research-"));
+    // Try each research agent workspace to find one with metabolism/config.json
+    for (const agent of researchAgents) {
+        const workspace = (agent.workspace ?? `~/.openclaw/workspace-${agent.id}`).replace("~", os.homedir());
+        const metabolismConfig = path.join(workspace, "metabolism", "config.json");
+        if (fs.existsSync(metabolismConfig)) {
+            return { workspace, projectId: agent.id.replace("research-", "") };
+        }
+    }
+    // If only one research agent, use it even without config.json (pre-bootstrap)
+    if (researchAgents.length === 1) {
+        const agent = researchAgents[0];
+        const workspace = (agent.workspace ?? `~/.openclaw/workspace-${agent.id}`).replace("~", os.homedir());
+        return { workspace, projectId: agent.id.replace("research-", "") };
+    }
+    return null;
+}
+function readMetabolismConfig(workspace) {
+    try {
+        return JSON.parse(fs.readFileSync(path.join(workspace, "metabolism", "config.json"), "utf-8"));
+    }
+    catch {
+        return null;
+    }
+}
+function countFiles(dirPath, filter) {
+    try {
+        const entries = fs.readdirSync(dirPath);
+        return filter ? entries.filter(filter).length : entries.length;
+    }
+    catch {
+        return 0;
+    }
+}
+function readRecentDiffs(workspace, count) {
+    const diffsDir = path.join(workspace, "metabolism", "diffs");
+    try {
+        return fs
+            .readdirSync(diffsDir)
+            .filter((f) => f.endsWith(".md"))
+            .sort()
+            .slice(-count);
+    }
+    catch {
+        return [];
+    }
+}
+/**
+ * /metabolism-status — Show knowledge metabolism status
+ */
+export function handleMetabolismStatus(_ctx) {
+    const project = findProjectWorkspace();
+    if (!project) {
+        return { text: "No research project found. Use `openclaw research init <id>` to create one." };
+    }
+    const { workspace, projectId } = project;
+    const config = readMetabolismConfig(workspace);
+    const topicCount = countFiles(path.join(workspace, "metabolism", "knowledge"), (f) => f.startsWith("topic-"));
+    const hypothesisCount = countFiles(path.join(workspace, "metabolism", "hypotheses"), (f) => f.endsWith(".md"));
+    const recentDiffs = readRecentDiffs(workspace, 3);
+    let output = `**Metabolism Status — ${projectId}**\n\n`;
+    if (!config) {
+        output += "Status: Pending BOOTSTRAP configuration\n";
+        output += "Send a message in this group to start the configuration flow.\n";
+        return { text: output };
+    }
+    const heartbeatStatus = config.heartbeat?.enabled !== false ? "active" : "paused";
+    output += `Day: ${config.currentDay}\n`;
+    output += `Topics: ${topicCount}\n`;
+    output += `Hypotheses: ${hypothesisCount}\n`;
+    output += `Heartbeat: ${heartbeatStatus}\n`;
+    if (recentDiffs.length > 0) {
+        output += `\nRecent diffs:\n`;
+        for (const diff of recentDiffs) {
+            output += `  ${diff}\n`;
+        }
+    }
+    return { text: output };
+}
+//# sourceMappingURL=metabolism-status.js.map

package/dist/src/commands/metabolism-status.js.map

@@ -0,0 +1 @@
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package/dist/src/commands.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"commands.d.ts","sourceRoot":"","sources":["../../src/commands.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,oBAAoB,EAAE,mBAAmB,EAAE,MAAM,UAAU,CAAC;AAkF1E;;GAEG;AACH,wBAAgB,oBAAoB,CAAC,IAAI,EAAE,oBAAoB,GAAG,mBAAmB,CAkCpF;AAED;;GAEG;AACH,wBAAgB,YAAY,CAAC,GAAG,EAAE,oBAAoB,GAAG,mBAAmB,CAiC3E;AAED;;GAEG;AACH,wBAAgB,WAAW,CAAC,GAAG,EAAE,oBAAoB,GAAG,mBAAmB,CA4B1E;AAED;;GAEG;AACH,wBAAgB,cAAc,CAAC,IAAI,EAAE,oBAAoB,GAAG,mBAAmB,CAqB9E;AAED;;GAEG;AACH,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,oBAAoB,GAAG,mBAAmB,CAclF;AAED;;GAEG;AACH,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,oBAAoB,GAAG,mBAAmB,CA+ClF"}
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package/dist/src/commands.js

@@ -76,6 +76,55 @@ function countFiles(dirPath, pattern) {
     }
     return count;
 }
+function getKnowledgeStateSummary(projectId) {
+    const file = path.join(WORKSPACE_ROOT, projectId, "knowledge_state", "state.json");
+    if (!fs.existsSync(file))
+        return null;
+    try {
+        const raw = fs.readFileSync(file, "utf-8");
+        const parsed = JSON.parse(raw);
+        const streams = parsed.streams ?? {};
+        const streamEntries = Object.values(streams);
+        let totalRuns = 0;
+        let totalHypotheses = 0;
+        let totalPaperNotes = 0;
+        let recentFullTextReadCount = 0;
+        let recentNotFullTextReadCount = 0;
+        let lastRunAtMs = 0;
+        let lastStatus;
+        for (const stream of streamEntries) {
+            totalRuns += Number.isFinite(stream.totalRuns) ? Math.max(0, Math.floor(stream.totalRuns)) : 0;
+            totalHypotheses += Number.isFinite(stream.totalHypotheses)
+                ? Math.max(0, Math.floor(stream.totalHypotheses))
+                : 0;
+            totalPaperNotes += Array.isArray(stream.paperNotes) ? stream.paperNotes.length : 0;
+            recentFullTextReadCount += Number.isFinite(stream.recentFullTextReadCount)
+                ? Math.max(0, Math.floor(stream.recentFullTextReadCount))
+                : 0;
+            recentNotFullTextReadCount += Number.isFinite(stream.recentNotFullTextReadCount)
+                ? Math.max(0, Math.floor(stream.recentNotFullTextReadCount))
+                : 0;
+            const runAt = Number.isFinite(stream.lastRunAtMs) ? Math.floor(stream.lastRunAtMs) : 0;
+            if (runAt >= lastRunAtMs) {
+                lastRunAtMs = runAt;
+                lastStatus = stream.lastStatus;
+            }
+        }
+        return {
+            totalRuns,
+            totalHypotheses,
+            totalPaperNotes,
+            recentFullTextReadCount,
+            recentNotFullTextReadCount,
+            ...(lastRunAtMs > 0 ? { lastRunAtMs } : {}),
+            ...(lastStatus ? { lastStatus } : {}),
+            streamCount: streamEntries.length,
+        };
+    }
+    catch {
+        return null;
+    }
+}
 /**
  * /research-status - Show workspace status
  */
@@ -85,6 +134,20 @@ export function handleResearchStatus(_ctx) {
     let output = "📁 **Research Workspace Status**\n\n";
     output += `Root: \`${WORKSPACE_ROOT}\`\n`;
     output += `Active: ${activeProject ? `**${activeProject}**` : "(none)"}\n\n`;
+    if (activeProject) {
+        const knowledgeSummary = getKnowledgeStateSummary(activeProject);
+        if (knowledgeSummary) {
+            output += "**Knowledge State (active project):**\n";
+            output += `- streams: ${knowledgeSummary.streamCount}\n`;
+            output += `- total runs: ${knowledgeSummary.totalRuns}\n`;
+            output += `- total hypotheses: ${knowledgeSummary.totalHypotheses}\n`;
+            output += `- total paper notes: ${knowledgeSummary.totalPaperNotes}\n`;
+            output += `- recent full-text-read papers: ${knowledgeSummary.recentFullTextReadCount}\n`;
+            output += `- recent not-full-text-read papers: ${knowledgeSummary.recentNotFullTextReadCount}\n`;
+            output += `- last status: ${knowledgeSummary.lastStatus ?? "(unknown)"}\n`;
+            output += `- last run: ${knowledgeSummary.lastRunAtMs ? new Date(knowledgeSummary.lastRunAtMs).toISOString() : "(none)"}\n\n`;
+        }
+    }
     if (projects.length === 0) {
         output += "_No projects found. Use /idea-generation to create one._";
     }

package/dist/src/commands.js.map

@@ -1 +1 @@
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package/dist/src/hooks/cron-skill-inject.d.ts

@@ -0,0 +1,21 @@
+/**
+ * Hook for injecting SKILL.md content into cron session messages.
+ *
+ * When a cron job fires with a heartbeat message starting with `/skill-name`,
+ * this hook reads the matching SKILL.md from the agent's workspace and
+ * prepends its body to the message, so the agent receives full workflow
+ * instructions in the isolated cron session.
+ */
+export declare function createCronSkillInjectionHook(): (event: {
+    payload?: {
+        message?: string;
+    };
+    [key: string]: unknown;
+}, ctx: {
+    sessionType?: string;
+    agentWorkspace?: string;
+    [key: string]: unknown;
+}) => Promise<{
+    payload: Record<string, unknown>;
+} | void>;
+//# sourceMappingURL=cron-skill-inject.d.ts.map

package/dist/src/hooks/cron-skill-inject.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"cron-skill-inject.d.ts","sourceRoot":"","sources":["../../../src/hooks/cron-skill-inject.ts"],"names":[],"mappings":"AAGA;;;;;;;GAOG;AACH,wBAAgB,4BAA4B,KAExC,OAAO;IAAE,OAAO,CAAC,EAAE;QAAE,OAAO,CAAC,EAAE,MAAM,CAAA;KAAE,CAAC;IAAC,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAA;CAAE,EACjE,KAAK;IAAE,WAAW,CAAC,EAAE,MAAM,CAAC;IAAC,cAAc,CAAC,EAAE,MAAM,CAAC;IAAC,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAA;CAAE,KAC7E,OAAO,CAAC;IAAE,OAAO,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAA;CAAE,GAAG,IAAI,CAAC,CA2CxD"}

package/dist/src/hooks/cron-skill-inject.js

@@ -0,0 +1,53 @@
+import fs from "node:fs/promises";
+import path from "node:path";
+/**
+ * Hook for injecting SKILL.md content into cron session messages.
+ *
+ * When a cron job fires with a heartbeat message starting with `/skill-name`,
+ * this hook reads the matching SKILL.md from the agent's workspace and
+ * prepends its body to the message, so the agent receives full workflow
+ * instructions in the isolated cron session.
+ */
+export function createCronSkillInjectionHook() {
+    return async (event, ctx) => {
+        // Only process cron sessions
+        if (ctx.sessionType !== "cron")
+            return;
+        const message = event.payload?.message;
+        if (typeof message !== "string")
+            return;
+        // Extract /skill-name from the first line
+        const match = message.match(/^\/([a-z][\w-]*)/);
+        if (!match)
+            return;
+        const skillName = match[1];
+        // Resolve agent workspace
+        const workspace = ctx.agentWorkspace;
+        if (typeof workspace !== "string")
+            return;
+        const skillPath = path.join(workspace, "skills", skillName, "SKILL.md");
+        let content;
+        try {
+            content = await fs.readFile(skillPath, "utf-8");
+        }
+        catch {
+            // No SKILL.md found in workspace — skip
+            return;
+        }
+        // Strip YAML frontmatter
+        const body = content.replace(/^---[\s\S]*?---\s*/, "").trim();
+        if (!body)
+            return;
+        // Inject skill body after the first line (/skill-name), before the rest
+        const firstNewline = message.indexOf("\n");
+        const newMessage = firstNewline === -1
+            ? message + "\n\n" + body
+            : message.slice(0, firstNewline) +
+                "\n\n" +
+                body +
+                "\n\n" +
+                message.slice(firstNewline + 1);
+        return { payload: { ...event.payload, message: newMessage } };
+    };
+}
+//# sourceMappingURL=cron-skill-inject.js.map

package/dist/src/hooks/cron-skill-inject.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"cron-skill-inject.js","sourceRoot":"","sources":["../../../src/hooks/cron-skill-inject.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,kBAAkB,CAAC;AAClC,OAAO,IAAI,MAAM,WAAW,CAAC;AAE7B;;;;;;;GAOG;AACH,MAAM,UAAU,4BAA4B;IAC1C,OAAO,KAAK,EACV,KAAiE,EACjE,GAA8E,EACxB,EAAE;QACxD,6BAA6B;QAC7B,IAAI,GAAG,CAAC,WAAW,KAAK,MAAM;YAAE,OAAO;QAEvC,MAAM,OAAO,GAAG,KAAK,CAAC,OAAO,EAAE,OAAO,CAAC;QACvC,IAAI,OAAO,OAAO,KAAK,QAAQ;YAAE,OAAO;QAExC,0CAA0C;QAC1C,MAAM,KAAK,GAAG,OAAO,CAAC,KAAK,CAAC,kBAAkB,CAAC,CAAC;QAChD,IAAI,CAAC,KAAK;YAAE,OAAO;QACnB,MAAM,SAAS,GAAG,KAAK,CAAC,CAAC,CAAC,CAAC;QAE3B,0BAA0B;QAC1B,MAAM,SAAS,GAAG,GAAG,CAAC,cAAc,CAAC;QACrC,IAAI,OAAO,SAAS,KAAK,QAAQ;YAAE,OAAO;QAE1C,MAAM,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,QAAQ,EAAE,SAAS,EAAE,UAAU,CAAC,CAAC;QAExE,IAAI,OAAe,CAAC;QACpB,IAAI,CAAC;YACH,OAAO,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,SAAS,EAAE,OAAO,CAAC,CAAC;QAClD,CAAC;QAAC,MAAM,CAAC;YACP,wCAAwC;YACxC,OAAO;QACT,CAAC;QAED,yBAAyB;QACzB,MAAM,IAAI,GAAG,OAAO,CAAC,OAAO,CAAC,oBAAoB,EAAE,EAAE,CAAC,CAAC,IAAI,EAAE,CAAC;QAC9D,IAAI,CAAC,IAAI;YAAE,OAAO;QAElB,wEAAwE;QACxE,MAAM,YAAY,GAAG,OAAO,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;QAC3C,MAAM,UAAU,GACd,YAAY,KAAK,CAAC,CAAC;YACjB,CAAC,CAAC,OAAO,GAAG,MAAM,GAAG,IAAI;YACzB,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,EAAE,YAAY,CAAC;gBAC9B,MAAM;gBACN,IAAI;gBACJ,MAAM;gBACN,OAAO,CAAC,KAAK,CAAC,YAAY,GAAG,CAAC,CAAC,CAAC;QAEtC,OAAO,EAAE,OAAO,EAAE,EAAE,GAAG,KAAK,CAAC,OAAO,EAAE,OAAO,EAAE,UAAU,EAAE,EAAE,CAAC;IAChE,CAAC,CAAC;AACJ,CAAC"}

package/dist/src/hooks/research-mode.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"research-mode.d.ts","sourceRoot":"","sources":["../../../src/hooks/research-mode.ts"],"names":[],"mappings":"AAAA;;GAEG;AACH,KAAK,SAAS,GAAG;IACf,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,CAAC,EAAE,OAAO,EAAE,CAAC;CACtB,CAAC;AAEF,KAAK,WAAW,GAAG;IACjB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,YAAY,CAAC,EAAE,MAAM,CAAC;CACvB,CAAC;AAEF,KAAK,UAAU,GAAG;IAChB,cAAc,CAAC,EAAE,MAAM,CAAC;IACxB,YAAY,CAAC,EAAE,MAAM,CAAC;CACvB,CAAC;AAwBF;;GAEG;AACH,wBAAgB,sBAAsB,KAC5B,QAAQ,SAAS,EAAE,UAAU,WAAW,KAAG,UAAU,CAG9D"}
+{"version":3,"file":"research-mode.d.ts","sourceRoot":"","sources":["../../../src/hooks/research-mode.ts"],"names":[],"mappings":"AAAA;;GAEG;AACH,KAAK,SAAS,GAAG;IACf,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,CAAC,EAAE,OAAO,EAAE,CAAC;CACtB,CAAC;AAEF,KAAK,WAAW,GAAG;IACjB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,YAAY,CAAC,EAAE,MAAM,CAAC;CACvB,CAAC;AAEF,KAAK,UAAU,GAAG;IAChB,cAAc,CAAC,EAAE,MAAM,CAAC;IACxB,YAAY,CAAC,EAAE,MAAM,CAAC;CACvB,CAAC;AA6BF;;GAEG;AACH,wBAAgB,sBAAsB,KAC5B,QAAQ,SAAS,EAAE,UAAU,WAAW,KAAG,UAAU,CAG9D"}

package/dist/src/hooks/research-mode.js

@@ -12,7 +12,12 @@ Workspace: $W/projects/<topic>/. Check /research-status before writing. Active p
   plan_res.md (research-plan) → project/ + ml_res.md (research-implement) → iterations/judge_v*.md (research-review) → experiment_res.md (research-experiment)
 Scheduling: if user asks for recurring or delayed push delivery (e.g. tomorrow at 08:00, daily digest), use research-subscription skill and call scientify_cron_job to create a real schedule.
 If it is a plain reminder (not research), set scientify_cron_job.message and do not default to the literature pipeline.
-For recurring research pushes, use scientify_literature_state to prepare dedupe context and record pushed paper IDs.
+For recurring research pushes, use scientify_literature_state to prepare dedupe context and record both pushed paper IDs and structured knowledge_state (changes, updates, hypotheses, run_log).
+Full-text-first policy: for papers used as core evidence, read full text when possible and mark full_text_read=true; if not fully read, you must explicitly mark full_text_read=false with unread_reason.
+Structured paper record policy: for each core paper, populate domain/subdomains/cross-domain links/research goal/approach/methodology design/key contributions/practical insights/must-understand points/limitations/evidence anchors.
+Use temporary local directory for full-text files (e.g. /tmp/scientify-fulltext/<run-id>) and delete it after record; write cleanup status to run_log.temp_cleanup_status.
+Quality targets for research runs: core full-text coverage >=80%; evidence-binding rate >=90% (key conclusions must bind to section+locator+quote); citation error rate <2%. If full text is missing, do not keep high-confidence conclusions.
+For research records, include project_id when available so state can persist under project knowledge_state/.
 When user gives preference feedback (e.g. "more like this", "skip this direction", "prefer arxiv"), quietly persist it via scientify_literature_state action=feedback when scope/topic are inferable.
 Preference memory is backend-only: use it to rerank future pushes, do not expose memory internals unless user explicitly asks.
 Do not stop at explanation when user explicitly asks to set a schedule.

package/dist/src/hooks/research-mode.js.map

@@ -1 +1 @@
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+{"version":3,"file":"research-mode.js","sourceRoot":"","sources":["../../../src/hooks/research-mode.ts"],"names":[],"mappings":"AAmBA;;GAEG;AACH,MAAM,oBAAoB,GAAG;;;;;;;;;;;;;;;;;;;;;;0NAsB6L,CAAC;AAE3N;;GAEG;AACH,MAAM,UAAU,sBAAsB;IACpC,OAAO,CAAC,MAAiB,EAAE,QAAqB,EAAc,EAAE;QAC9D,OAAO,EAAE,cAAc,EAAE,oBAAoB,EAAE,CAAC;IAClD,CAAC,CAAC;AACJ,CAAC"}

package/dist/src/knowledge-state/project.d.ts

@@ -0,0 +1,13 @@
+export type ProjectContext = {
+    projectId: string;
+    projectPath: string;
+    created: boolean;
+};
+export declare function resolveProjectContext(args: {
+    projectId?: string;
+    scope: string;
+    topic: string;
+    autoCreate?: boolean;
+}): Promise<ProjectContext>;
+export declare function getProjectRootPath(): string;
+//# sourceMappingURL=project.d.ts.map

package/dist/src/knowledge-state/project.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/knowledge-state/project.js

@@ -0,0 +1,88 @@
+import { createHash } from "node:crypto";
+import fs from "node:fs";
+import { mkdir, writeFile } from "node:fs/promises";
+import os from "node:os";
+import path from "node:path";
+const PROJECT_ROOT = path.join(os.homedir(), ".openclaw", "workspace", "projects");
+const ACTIVE_PROJECT_FILE = path.join(PROJECT_ROOT, ".active");
+function normalizeText(raw) {
+    return raw.trim().replace(/\s+/g, " ");
+}
+function slugify(raw) {
+    const normalized = normalizeText(raw)
+        .toLowerCase()
+        .replace(/[^a-z0-9_-]+/g, "-")
+        .replace(/-+/g, "-")
+        .replace(/^-|-$/g, "");
+    return normalized || "topic";
+}
+function readActiveProjectId() {
+    try {
+        const raw = fs.readFileSync(ACTIVE_PROJECT_FILE, "utf-8").trim();
+        if (!raw)
+            return undefined;
+        const cleaned = slugify(raw);
+        return cleaned.length > 0 ? cleaned : undefined;
+    }
+    catch {
+        return undefined;
+    }
+}
+function projectExists(projectId) {
+    const projectPath = path.join(PROJECT_ROOT, projectId);
+    return fs.existsSync(projectPath) && fs.statSync(projectPath).isDirectory();
+}
+function deriveAutoProjectId(scope, topic) {
+    const scopeSlug = slugify(scope).slice(0, 18);
+    const topicSlug = slugify(topic).slice(0, 28);
+    const hash = createHash("sha1")
+        .update(`${scope}\n${topic}`)
+        .digest("hex")
+        .slice(0, 6);
+    return `auto-${topicSlug}-${scopeSlug}-${hash}`;
+}
+async function ensureProjectScaffold(projectId, topic) {
+    const projectPath = path.join(PROJECT_ROOT, projectId);
+    if (projectExists(projectId)) {
+        return false;
+    }
+    await mkdir(projectPath, { recursive: true });
+    const createdAt = new Date().toISOString();
+    const projectJsonPath = path.join(projectPath, "project.json");
+    const taskJsonPath = path.join(projectPath, "task.json");
+    if (!fs.existsSync(projectJsonPath)) {
+        await writeFile(projectJsonPath, JSON.stringify({
+            id: projectId,
+            name: topic,
+            created: createdAt,
+            topics: [topic],
+        }, null, 2), "utf-8");
+    }
+    if (!fs.existsSync(taskJsonPath)) {
+        await writeFile(taskJsonPath, JSON.stringify({
+            domain: topic,
+            focus: topic,
+            created: createdAt,
+        }, null, 2), "utf-8");
+    }
+    return true;
+}
+export async function resolveProjectContext(args) {
+    const explicitProjectId = args.projectId ? slugify(args.projectId) : undefined;
+    const activeProjectId = readActiveProjectId();
+    const picked = explicitProjectId || activeProjectId || deriveAutoProjectId(args.scope, args.topic);
+    const autoCreate = args.autoCreate !== false;
+    const created = autoCreate ? await ensureProjectScaffold(picked, args.topic) : false;
+    if (!autoCreate && !projectExists(picked)) {
+        throw new Error(`project not found: ${picked}`);
+    }
+    return {
+        projectId: picked,
+        projectPath: path.join(PROJECT_ROOT, picked),
+        created,
+    };
+}
+export function getProjectRootPath() {
+    return PROJECT_ROOT;
+}
+//# sourceMappingURL=project.js.map

package/dist/src/knowledge-state/project.js.map

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package/dist/src/knowledge-state/render.d.ts

@@ -0,0 +1,63 @@
+import type { ExplorationTraceInput, KnowledgeChangeInput, KnowledgeHypothesisInput, KnowledgePaperInput, KnowledgeUpdateInput } from "./types.js";
+export declare function dayKeyFromTimestamp(ts: number): string;
+export declare function slugifyTopic(raw: string): string;
+export declare function renderPaperNoteHeaderMarkdown(args: {
+    paper: KnowledgePaperInput;
+    file: string;
+}): string;
+export declare function renderPaperNoteRunMarkdown(args: {
+    now: string;
+    runId: string;
+    role: "core" | "exploration";
+    paper: KnowledgePaperInput;
+}): string;
+export declare function renderIngestLogMarkdown(args: {
+    now: string;
+    runId: string;
+    scope: string;
+    topic: string;
+    papers: KnowledgePaperInput[];
+}): string;
+export declare function renderExplorationLogMarkdown(args: {
+    now: string;
+    runId: string;
+    trace: ExplorationTraceInput[];
+    papers: KnowledgePaperInput[];
+}): string;
+export declare function renderDailyChangesMarkdown(args: {
+    now: string;
+    runId: string;
+    topic: string;
+    changes: KnowledgeChangeInput[];
+}): string;
+export declare function renderTopicUpdateMarkdown(args: {
+    now: string;
+    runId: string;
+    updates: KnowledgeUpdateInput[];
+}): string;
+export declare function renderHypothesisMarkdown(args: {
+    now: string;
+    hypothesisId: string;
+    runId: string;
+    hypothesis: KnowledgeHypothesisInput;
+}): string;
+export declare function renderKnowledgeIndexMarkdown(args: {
+    now: string;
+    topic: string;
+    topicFiles: string[];
+    paperNotesCount: number;
+    totalHypotheses: number;
+    recentPapers: KnowledgePaperInput[];
+    fullTextReadCount: number;
+    notFullTextReadCount: number;
+    qualityGate: {
+        passed: boolean;
+        fullTextCoveragePct: number;
+        evidenceBindingRatePct: number;
+        citationErrorRatePct: number;
+        reasons: string[];
+    };
+    unreadCorePaperIds: string[];
+    lastStatus?: string;
+}): string;
+//# sourceMappingURL=render.d.ts.map

package/dist/src/knowledge-state/render.d.ts.map

@@ -0,0 +1 @@
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