scientify 1.10.3 → 1.12.0

package/README.md

@@ -275,7 +275,7 @@ Or invoke a specific skill directly with a slash command:
 
 ```
 /research-pipeline
-/literature-survey
+/research-collect
 /idea-generation
 ```
 
@@ -310,7 +310,7 @@ You can also check status anytime with:
 | Skill | Slash Command | Description |
 |-------|---------------|-------------|
 | **research-pipeline** | `/research-pipeline` | Orchestrator. Spawns sub-agents for each phase, verifies outputs between steps. |
-| **literature-survey** | `/literature-survey` | Search arXiv → filter → download .tex sources → cluster → generate survey report. |
+| **research-collect** | `/research-collect` | Search arXiv → filter → download .tex sources → cluster → generate survey report. |
 | **research-survey** | `/research-survey` | Deep analysis of papers: extract formulas, map to code, produce method comparison table. |
 | **research-plan** | `/research-plan` | Create 4-part implementation plan (Dataset/Model/Training/Testing) from survey results. |
 | **research-implement** | `/research-implement` | Implement ML code from plan, run 2-epoch validation with `uv` venv isolation. |
@@ -336,8 +336,8 @@ You can also check status anytime with:
 | `unpaywall_download` | Download open access PDFs by DOI via Unpaywall API. Non-OA papers are silently skipped (no failure). |
 | `github_search` | Search GitHub repositories. Returns repo name, description, stars, URL. Supports language filtering and sorting. |
 | `paper_browser` | Paginated browsing of large paper files (.tex/.md) to avoid loading thousands of lines into context. Returns specified line range with navigation info. |
-| `scientify_cron_job` | Manage scheduled Scientify jobs from the model (`upsert`/`list`/`remove`). Main fields: `action`, `scope`, `schedule`, `topic`, `message`, `max_papers`, `recency_days`, `candidate_pool`, `score_weights`, `sources`, `channel`, `to`, `no_deliver`, `job_id`. |
-| `scientify_literature_state` | Persistent incremental state for subscriptions: `prepare` dedupe context (+ memory hints), `record` pushed papers, `feedback` lightweight preference memory, and `status` inspection with traceable logs. |
+| `scientify_cron_job` | Manage scheduled Scientify jobs from the model (`upsert`/`list`/`remove`). Main fields: `action`, `scope`, `schedule`, `topic`, `project`, `message`, `max_papers`, `recency_days`, `candidate_pool`, `score_weights`, `sources`, `channel`, `to`, `no_deliver`, `job_id`. |
+| `scientify_literature_state` | Persistent incremental state for subscriptions: `prepare` dedupe context (+ memory hints), `record` pushed papers + project `knowledge_state` artifacts (including `paper_notes` deep-reading fields and full-text cleanup run logs), `feedback` lightweight preference memory, and `status` inspection with traceable logs. |
 
 ### Commands (direct, no LLM)
 
@@ -349,7 +349,7 @@ You can also check status anytime with:
 | `/projects` | List all projects |
 | `/project-switch <id>` | Switch active project |
 | `/project-delete <id>` | Delete a project |
-| `/research-subscribe ...` | Create/update scheduled Scientify jobs (supports `daily`, `weekly`, `every`, `at`, `cron`; options: `--channel`, `--to`, `--topic`, `--message`, `--max-papers`, `--recency-days`, `--candidate-pool`, `--score-weights`, `--sources`, `--no-deliver`) |
+| `/research-subscribe ...` | Create/update scheduled Scientify jobs (supports `daily`, `weekly`, `every`, `at`, `cron`; options: `--channel`, `--to`, `--topic`, `--project`, `--message`, `--max-papers`, `--recency-days`, `--candidate-pool`, `--score-weights`, `--sources`, `--no-deliver`) |
 | `/research-subscriptions` | Show your scheduled Scientify jobs |
 | `/research-unsubscribe [job-id]` | Remove your scheduled Scientify jobs (or a specific job) |
 
@@ -360,6 +360,7 @@ You can also check status anytime with:
 - `/research-subscribe weekly mon 09:30 --channel telegram --to 123456789`
 - `/research-subscribe at 2m --channel webui` (`webui`/`tui` are aliases of `last`)
 - `/research-subscribe daily 08:00 --topic "LLM alignment"`
+- `/research-subscribe daily 08:00 --topic "LLM alignment" --project llm-alignment`
 - `/research-subscribe daily 08:00 --topic "LLM alignment" --max-papers 5 --recency-days 30 --sources arxiv,openalex`
 - `/research-subscribe daily 08:00 --topic "LLM alignment" --candidate-pool 12 --score-weights relevance:45,novelty:20,authority:25,actionability:10`
 - `/research-subscribe at 1m --message "Time to drink coffee."`
@@ -371,9 +372,14 @@ Behavior notes:
 - Reminder-safe fallback: if `topic` looks like a plain reminder (for example "remind me to sleep"), Scientify auto-routes it as a reminder message instead of literature pipeline.
 - One-shot topic (`at ... --topic ...`) uses focused retrieval of representative papers; recurring schedules (`daily/weekly/every/cron`) use incremental tracking mode.
 - Recurring incremental mode uses candidate-pool ranking before Top-K selection; if no unseen paper is found, it runs one representative fallback pass before returning empty.
+- Default `max_papers` is 5 unless overridden by `--max-papers`.
+- Built-in quality gates for research records: core full-text coverage >= 80%, evidence-binding rate >= 90%, citation error rate < 2%. Runs failing gates are downgraded to `degraded_quality`.
 - Lightweight preference memory is stored backend-only (keyword/source affinities) and used to rerank future pushes quietly.
-- Incremental state is persisted under `~/.openclaw/workspace/scientify/` (`literature-state.json`, `literature-push-log.jsonl`) for dedupe + traceability.
-- Storage: subscription jobs are stored in OpenClaw cron storage, not in project workspace files.
+- Incremental dedupe + memory state is persisted under `~/.openclaw/workspace/scientify/` (`literature-state.json`, `literature-push-log.jsonl`).
+- Project-level research traceability is persisted under `~/.openclaw/workspace/projects/{project-id}/knowledge_state/`.
+- Full-text-first scheduled runs store per-paper deep-reading notes (domain/subdomains/cross-domain links/research goal/approach/design/contributions/practical insights/must-understand points/limitations/evidence anchors) under `knowledge_state/paper_notes/`.
+- Full-text files should be downloaded to a temporary directory and cleaned after each run; cleanup result is tracked in `knowledge_state` run logs.
+- Storage: subscription jobs are stored in OpenClaw cron storage; knowledge artifacts are stored in project workspace files.
 - Global inspect: `openclaw cron list --all --json`
 
 ---
@@ -404,9 +410,17 @@ projects/
 │   ├── iterations/                # Review iterations
 │   │   └── judge_v*.md
 │   ├── experiment_res.md          # Final experiment results
-│   └── ideas/                     # Generated ideas
+│   ├── ideas/                     # Generated ideas
 │       ├── idea_*.md
 │       └── selected_idea.md
+│   └── knowledge_state/           # Scheduled research state artifacts
+│       ├── knowledge/
+│       ├── paper_notes/           # Per-paper deep-reading records
+│       ├── daily_changes/
+│       ├── hypotheses/
+│       ├── logs/
+│       ├── state.json
+│       └── events.jsonl
 └── another-project/
 ```
 

package/README.zh.md

@@ -275,7 +275,7 @@ openclaw gateway
 
 ```
 /research-pipeline
-/literature-survey
+/research-collect
 /idea-generation
 ```
 
@@ -310,7 +310,7 @@ openclaw gateway
 | Skill | 斜杠命令 | 描述 |
 |-------|---------|------|
 | **research-pipeline** | `/research-pipeline` | 编排器。逐阶段 spawn 子 agent，验证产出后推进。 |
-| **literature-survey** | `/literature-survey` | 搜索 arXiv → 筛选 → 下载 .tex 源文件 → 聚类 → 生成调研报告。 |
+| **research-collect** | `/research-collect` | 搜索 arXiv → 筛选 → 下载 .tex 源文件 → 聚类 → 生成调研报告。 |
 | **research-survey** | `/research-survey` | 深度分析论文：提取公式、映射代码、生成核心方法对比表。 |
 | **research-plan** | `/research-plan` | 从调研结果制定四部分实现计划（数据集/模型/训练/测试）。 |
 | **research-implement** | `/research-implement` | 按计划实现 ML 代码，`uv` 虚拟环境隔离，2 epoch 验证。 |
@@ -336,8 +336,8 @@ openclaw gateway
 | `unpaywall_download` | 通过 Unpaywall API 按 DOI 下载开放获取 PDF。非 OA 论文跳过不报错。 |
 | `github_search` | 搜索 GitHub 仓库，返回仓库名、描述、star 数、URL。支持语言过滤和排序。 |
 | `paper_browser` | 分页浏览大型论文文件（.tex/.md），避免一次性加载数千行到上下文。返回指定行范围和导航信息。 |
-| `scientify_cron_job` | 由模型管理 Scientify 定时任务（`upsert`/`list`/`remove`）。主要参数：`action`、`scope`、`schedule`、`topic`、`message`、`max_papers`、`recency_days`、`candidate_pool`、`score_weights`、`sources`、`channel`、`to`、`no_deliver`、`job_id`。 |
-| `scientify_literature_state` | 订阅增量状态工具：`prepare` 获取去重上下文（含记忆提示）、`record` 记录已推送论文、`feedback` 写入轻量偏好记忆、`status` 查看状态与可追溯日志。 |
+| `scientify_cron_job` | 由模型管理 Scientify 定时任务（`upsert`/`list`/`remove`）。主要参数：`action`、`scope`、`schedule`、`topic`、`project`、`message`、`max_papers`、`recency_days`、`candidate_pool`、`score_weights`、`sources`、`channel`、`to`、`no_deliver`、`job_id`。 |
+| `scientify_literature_state` | 订阅增量状态工具：`prepare` 获取去重上下文（含记忆提示）、`record` 记录已推送论文 + 项目级 `knowledge_state` 产物（含 `paper_notes` 深读字段与全文临时清理日志）、`feedback` 写入轻量偏好记忆、`status` 查看状态与可追溯日志。 |
 
 ### Commands（直接执行，不经 LLM）
 
@@ -349,7 +349,7 @@ openclaw gateway
 | `/projects` | 列出所有项目 |
 | `/project-switch <id>` | 切换当前项目 |
 | `/project-delete <id>` | 删除项目 |
-| `/research-subscribe ...` | 创建/更新定时 Scientify 任务（支持 `daily`、`weekly`、`every`、`at`、`cron`；可选参数：`--channel`、`--to`、`--topic`、`--message`、`--max-papers`、`--recency-days`、`--candidate-pool`、`--score-weights`、`--sources`、`--no-deliver`） |
+| `/research-subscribe ...` | 创建/更新定时 Scientify 任务（支持 `daily`、`weekly`、`every`、`at`、`cron`；可选参数：`--channel`、`--to`、`--topic`、`--project`、`--message`、`--max-papers`、`--recency-days`、`--candidate-pool`、`--score-weights`、`--sources`、`--no-deliver`） |
 | `/research-subscriptions` | 查看你的 Scientify 定时任务 |
 | `/research-unsubscribe [job-id]` | 取消你的 Scientify 定时任务（或删除指定任务） |
 
@@ -360,6 +360,7 @@ openclaw gateway
 - `/research-subscribe weekly mon 09:30 --channel telegram --to 123456789`
 - `/research-subscribe at 2m --channel webui`（`webui`/`tui` 是 `last` 的别名）
 - `/research-subscribe daily 08:00 --topic "LLM alignment"`
+- `/research-subscribe daily 08:00 --topic "LLM alignment" --project llm-alignment`
 - `/research-subscribe daily 08:00 --topic "LLM alignment" --max-papers 5 --recency-days 30 --sources arxiv,openalex`
 - `/research-subscribe daily 08:00 --topic "LLM alignment" --candidate-pool 12 --score-weights relevance:45,novelty:20,authority:25,actionability:10`
 - `/research-subscribe at 1m --message "Time to drink coffee."`
@@ -371,9 +372,14 @@ openclaw gateway
 - 提醒兜底：如果 `topic` 看起来是普通提醒（例如“提醒我睡觉”），Scientify 会自动按提醒消息处理，不走文献流水线。
 - 一次性研究任务（`at ... --topic ...`）使用“代表论文聚焦检索”；周期任务（`daily/weekly/every/cron`）保持“增量追踪”模式。
 - 周期增量模式会先构建候选池并评分后再选 Top-K；若本轮无“未推送新文献”，会自动再跑一轮代表性回退检索，再决定是否返回空结果。
+- 默认 `max_papers` 为 5（可用 `--max-papers` 覆盖）。
+- 研究记录内置质量闸门：核心论文全文覆盖率 >= 80%、证据绑定率 >= 90%、引用错误率 < 2%。未达标会自动降级为 `degraded_quality`。
 - 轻量偏好记忆（关键词/来源亲和）仅后台保存，不默认展示给用户，会静默影响后续排序。
-- 增量状态会持久化到 `~/.openclaw/workspace/scientify/`（`literature-state.json`、`literature-push-log.jsonl`），用于去重与可追溯。
-- 存储位置：订阅任务保存在 OpenClaw cron 存储中，不写入项目 workspace 文件。
+- 增量去重与偏好状态会持久化到 `~/.openclaw/workspace/scientify/`（`literature-state.json`、`literature-push-log.jsonl`）。
+- 项目级研究可追溯状态会持久化到 `~/.openclaw/workspace/projects/{project-id}/knowledge_state/`。
+- 全文优先的定时研究会在 `knowledge_state/paper_notes/` 中沉淀逐篇深读记录（领域/子领域/交叉领域/研究目标/方法设计/贡献/经验启发/必读要点/局限/证据锚点）。
+- 全文文件建议下载到临时目录并在每轮后清理，清理结果会写入 `knowledge_state` 的 run log。
+- 存储位置：订阅任务保存在 OpenClaw cron 存储中；知识状态产物写入项目 workspace 文件。
 - 全局查看：`openclaw cron list --all --json`
 
 ---
@@ -404,9 +410,17 @@ projects/
 │   ├── iterations/                # 审查迭代
 │   │   └── judge_v*.md
 │   ├── experiment_res.md          # 最终实验结果
-│   └── ideas/                     # 生成的想法
-│       ├── idea_*.md
-│       └── selected_idea.md
+│   ├── ideas/                     # 生成的想法
+│   │   ├── idea_*.md
+│   │   └── selected_idea.md
+│   └── knowledge_state/           # 定时研究状态产物
+│       ├── knowledge/
+│       ├── paper_notes/           # 逐篇深读沉淀
+│       ├── daily_changes/
+│       ├── hypotheses/
+│       ├── logs/
+│       ├── state.json
+│       └── events.jsonl
 └── another-project/
 ```
 

package/dist/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../index.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,UAAU,CAAC;AAwClD,MAAM,CAAC,OAAO,UAAU,QAAQ,CAAC,GAAG,EAAE,iBAAiB,QAgJtD"}

package/dist/index.js

@@ -15,6 +15,9 @@ import { createSkillInjectionHook } from "./src/hooks/inject-skill.js";
 import { createResearchModeHook } from "./src/hooks/research-mode.js";
 import { createScientifyCronAutofillHook } from "./src/hooks/scientify-cron-autofill.js";
 import { createScientifyMessageTrackerHook, createScientifySignaturePromptHook, createScientifyUsageCleanupHook, createScientifyUsageTrackerHook, } from "./src/hooks/scientify-signature.js";
+import { createCronSkillInjectionHook } from "./src/hooks/cron-skill-inject.js";
+import { registerResearchCli } from "./src/cli/research.js";
+import { handleMetabolismStatus } from "./src/commands/metabolism-status.js";
 // Default: check every hour
 const UPDATE_CHECK_INTERVAL_MS = 60 * 60 * 1000;
 export default function register(api) {
@@ -127,6 +130,18 @@ export default function register(api) {
     api.on("before_agent_start", createScientifySignaturePromptHook(), {
         priority: 90,
     });
-    api.logger.info("Scientify plugin loaded (research mode: always active)");
+    // Inject SKILL.md into cron session messages (for metabolism heartbeat).
+    api.on("before_agent_start", createCronSkillInjectionHook());
+    // Register CLI commands: openclaw research init/list/status/delete
+    registerResearchCli(api);
+    // Register metabolism chat commands
+    api.registerCommand({
+        name: "metabolism-status",
+        description: "Show knowledge metabolism status (day, topics, hypotheses)",
+        acceptsArgs: false,
+        requireAuth: false,
+        handler: handleMetabolismStatus,
+    });
+    api.logger.info("Scientify plugin loaded");
 }
 //# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -1 +1 @@
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package/dist/src/cli/research.d.ts

@@ -0,0 +1,10 @@
+/**
+ * Register the `openclaw research` CLI command.
+ */
+export declare function registerResearchCli(api: {
+    registerCli: (registrar: unknown, opts?: {
+        commands?: string[];
+    }) => void;
+    source: string;
+}): void;
+//# sourceMappingURL=research.d.ts.map

package/dist/src/cli/research.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"research.d.ts","sourceRoot":"","sources":["../../../src/cli/research.ts"],"names":[],"mappings":"AAiSA;;GAEG;AACH,wBAAgB,mBAAmB,CACjC,GAAG,EAAE;IAAE,WAAW,EAAE,CAAC,SAAS,EAAE,OAAO,EAAE,IAAI,CAAC,EAAE;QAAE,QAAQ,CAAC,EAAE,MAAM,EAAE,CAAA;KAAE,KAAK,IAAI,CAAC;IAAC,MAAM,EAAE,MAAM,CAAA;CAAE,QA4DnG"}

package/dist/src/cli/research.js

@@ -0,0 +1,283 @@
+import fs from "node:fs";
+import path from "node:path";
+import os from "node:os";
+import { renderBootstrapMd, renderSoulMd, renderAgentsMd } from "../templates/bootstrap.js";
+const OPENCLAW_HOME = path.join(os.homedir(), ".openclaw");
+const OPENCLAW_CONFIG = path.join(OPENCLAW_HOME, "openclaw.json");
+const CRON_JOBS_PATH = path.join(OPENCLAW_HOME, "cron", "jobs.json");
+function readOpenClawConfig() {
+    try {
+        return JSON.parse(fs.readFileSync(OPENCLAW_CONFIG, "utf-8"));
+    }
+    catch {
+        return {};
+    }
+}
+function writeOpenClawConfig(config) {
+    fs.writeFileSync(OPENCLAW_CONFIG, JSON.stringify(config, null, 2) + "\n");
+}
+function readCronJobs() {
+    try {
+        return JSON.parse(fs.readFileSync(CRON_JOBS_PATH, "utf-8"));
+    }
+    catch {
+        return { version: 1, jobs: [] };
+    }
+}
+function writeCronJobs(data) {
+    const dir = path.dirname(CRON_JOBS_PATH);
+    fs.mkdirSync(dir, { recursive: true });
+    fs.writeFileSync(CRON_JOBS_PATH, JSON.stringify(data, null, 2) + "\n");
+}
+function addCronJob(agentId) {
+    const data = readCronJobs();
+    const jobId = `${agentId}-metabolism`;
+    // Avoid duplicates
+    if (data.jobs.some((j) => j.jobId === jobId))
+        return;
+    data.jobs.push({
+        name: `${agentId} daily metabolism`,
+        jobId,
+        schedule: { kind: "cron", expr: "0 6 * * *", tz: "Asia/Shanghai" },
+        sessionTarget: "isolated",
+        payload: {
+            kind: "agentTurn",
+            agentId,
+            message: "执行每日知识新陈代谢。阅读 AGENTS.md 了解工作流，然后使用 /metabolism 技能完成今日代谢。",
+        },
+        delivery: { mode: "announce" },
+        enabled: true,
+    });
+    writeCronJobs(data);
+}
+function removeCronJob(agentId) {
+    const data = readCronJobs();
+    const jobId = `${agentId}-metabolism`;
+    const before = data.jobs.length;
+    data.jobs = data.jobs.filter((j) => j.jobId !== jobId);
+    if (data.jobs.length < before) {
+        writeCronJobs(data);
+    }
+}
+function findPluginSkillsDir(entryDir) {
+    // Walk up to find openclaw.plugin.json
+    let dir = entryDir;
+    for (;;) {
+        if (fs.existsSync(path.join(dir, "openclaw.plugin.json"))) {
+            return path.join(dir, "skills");
+        }
+        const parent = path.dirname(dir);
+        if (parent === dir)
+            break;
+        dir = parent;
+    }
+    return path.join(entryDir, "skills");
+}
+function listResearchProjects() {
+    const config = readOpenClawConfig();
+    const agents = config.agents?.list ?? [];
+    const projects = [];
+    for (const agent of agents) {
+        if (!agent.id.startsWith("research-"))
+            continue;
+        const projectId = agent.id.replace("research-", "");
+        const workspace = agent.workspace
+            ? agent.workspace.replace("~", os.homedir())
+            : path.join(OPENCLAW_HOME, `workspace-${agent.id}`);
+        let currentDay = 0;
+        let createdAt = "";
+        const configPath = path.join(workspace, "metabolism", "config.json");
+        try {
+            const mc = JSON.parse(fs.readFileSync(configPath, "utf-8"));
+            currentDay = mc.currentDay ?? 0;
+            createdAt = mc.createdAt ?? "";
+        }
+        catch {
+            // config not yet created (pre-bootstrap)
+        }
+        projects.push({
+            id: projectId,
+            agentId: agent.id,
+            workspace,
+            currentDay,
+            createdAt,
+        });
+    }
+    return projects;
+}
+function initProject(id, pluginSkillsDir) {
+    const agentId = `research-${id}`;
+    const workspace = path.join(OPENCLAW_HOME, `workspace-${agentId}`);
+    // Check if workspace already exists
+    if (fs.existsSync(workspace)) {
+        console.error(`Error: workspace already exists at ${workspace}`);
+        process.exit(1);
+    }
+    // 1. Create workspace directory structure
+    const dirs = [
+        workspace,
+        path.join(workspace, "metabolism"),
+        path.join(workspace, "metabolism", "knowledge"),
+        path.join(workspace, "metabolism", "diffs"),
+        path.join(workspace, "metabolism", "hypotheses"),
+        path.join(workspace, "metabolism", "log"),
+        path.join(workspace, "skills", "metabolism"),
+        path.join(workspace, "survey"),
+        path.join(workspace, "papers"),
+        path.join(workspace, "ideas"),
+        path.join(workspace, "experiments"),
+    ];
+    for (const dir of dirs) {
+        fs.mkdirSync(dir, { recursive: true });
+    }
+    // 2. Write bootstrap files
+    fs.writeFileSync(path.join(workspace, "BOOTSTRAP.md"), renderBootstrapMd(id));
+    fs.writeFileSync(path.join(workspace, "SOUL.md"), renderSoulMd(id));
+    fs.writeFileSync(path.join(workspace, "AGENTS.md"), renderAgentsMd());
+    // 3. Copy metabolism SKILL.md from plugin bundled skills
+    const srcSkill = path.join(pluginSkillsDir, "metabolism", "SKILL.md");
+    const dstSkill = path.join(workspace, "skills", "metabolism", "SKILL.md");
+    if (fs.existsSync(srcSkill)) {
+        fs.copyFileSync(srcSkill, dstSkill);
+    }
+    else {
+        console.warn(`Warning: metabolism SKILL.md not found at ${srcSkill}`);
+    }
+    // 4. Modify openclaw.json
+    const config = readOpenClawConfig();
+    // Add agent to agents.list
+    if (!config.agents)
+        config.agents = {};
+    const agents = config.agents;
+    if (!agents.list)
+        agents.list = [];
+    // Check for duplicate
+    if (agents.list.some((a) => a.id === agentId)) {
+        console.error(`Error: agent '${agentId}' already exists in openclaw.json`);
+        process.exit(1);
+    }
+    agents.list.push({
+        id: agentId,
+        workspace: `~/.openclaw/workspace-${agentId}`,
+    });
+    writeOpenClawConfig(config);
+    // 5. Register daily metabolism cron job
+    addCronJob(agentId);
+    console.log(`\nResearch project '${id}' created successfully.\n`);
+    console.log(`  Agent ID:  ${agentId}`);
+    console.log(`  Workspace: ${workspace}`);
+    console.log(`  Cron:      daily metabolism at 06:00 (Asia/Shanghai)\n`);
+    console.log("Next steps:");
+    console.log("  1. Restart Gateway to load the new agent");
+    console.log("  2. In Gateway web UI, create a Feishu group binding for this agent");
+    console.log("  3. Send a message in the Feishu group to start the BOOTSTRAP configuration");
+}
+function showStatus(id) {
+    const projects = listResearchProjects();
+    const project = projects.find((p) => p.id === id);
+    if (!project) {
+        console.error(`Error: research project '${id}' not found`);
+        process.exit(1);
+    }
+    const knowledgeDir = path.join(project.workspace, "metabolism", "knowledge");
+    const hypothesesDir = path.join(project.workspace, "metabolism", "hypotheses");
+    const diffsDir = path.join(project.workspace, "metabolism", "diffs");
+    let topicCount = 0;
+    let hypothesisCount = 0;
+    let latestDiffs = [];
+    try {
+        topicCount = fs.readdirSync(knowledgeDir).filter((f) => f.startsWith("topic-")).length;
+    }
+    catch { /* empty */ }
+    try {
+        hypothesisCount = fs.readdirSync(hypothesesDir).filter((f) => f.endsWith(".md")).length;
+    }
+    catch { /* empty */ }
+    try {
+        latestDiffs = fs
+            .readdirSync(diffsDir)
+            .filter((f) => f.endsWith(".md"))
+            .sort()
+            .slice(-3);
+    }
+    catch { /* empty */ }
+    console.log(`\nResearch Project: ${id}`);
+    console.log(`  Agent:      ${project.agentId}`);
+    console.log(`  Workspace:  ${project.workspace}`);
+    console.log(`  Day:        ${project.currentDay}`);
+    console.log(`  Topics:     ${topicCount}`);
+    console.log(`  Hypotheses: ${hypothesisCount}`);
+    if (latestDiffs.length > 0) {
+        console.log(`  Recent diffs: ${latestDiffs.join(", ")}`);
+    }
+    if (project.createdAt) {
+        console.log(`  Created:    ${project.createdAt}`);
+    }
+}
+function deleteProject(id) {
+    const agentId = `research-${id}`;
+    const workspace = path.join(OPENCLAW_HOME, `workspace-${agentId}`);
+    // Remove workspace
+    if (fs.existsSync(workspace)) {
+        fs.rmSync(workspace, { recursive: true, force: true });
+        console.log(`Deleted workspace: ${workspace}`);
+    }
+    // Remove from openclaw.json
+    const config = readOpenClawConfig();
+    const agents = config.agents;
+    if (agents?.list) {
+        agents.list = agents.list.filter((a) => a.id !== agentId);
+    }
+    // Remove cron job
+    removeCronJob(agentId);
+    writeOpenClawConfig(config);
+    console.log(`Removed agent '${agentId}' from openclaw.json`);
+    console.log(`\nNote: If you created a Feishu group binding, remove it manually in the Gateway web UI.`);
+}
+/**
+ * Register the `openclaw research` CLI command.
+ */
+export function registerResearchCli(api) {
+    const entryDir = path.dirname(api.source);
+    api.registerCli(({ program }) => {
+        const cmd = program.command("research");
+        cmd.description("Manage CKM research projects");
+        const pluginSkillsDir = findPluginSkillsDir(entryDir);
+        // openclaw research init <id>
+        const initCmd = cmd.command("init <id>");
+        initCmd.description("Create a new research project agent + workspace");
+        initCmd.action((id) => {
+            initProject(String(id), pluginSkillsDir);
+        });
+        // openclaw research list
+        const listCmd = cmd.command("list");
+        listCmd.description("List all research projects");
+        listCmd.action(() => {
+            const projects = listResearchProjects();
+            if (projects.length === 0) {
+                console.log("No research projects found.");
+                return;
+            }
+            console.log("\nResearch Projects:\n");
+            for (const p of projects) {
+                const configured = p.currentDay > 0 || p.createdAt ? "" : " (pending BOOTSTRAP)";
+                console.log(`  ${p.id}  Day ${p.currentDay}${configured}`);
+                console.log(`    ${p.workspace}`);
+            }
+            console.log();
+        });
+        // openclaw research status <id>
+        const statusCmd = cmd.command("status <id>");
+        statusCmd.description("Show research project metabolism status");
+        statusCmd.action((id) => {
+            showStatus(String(id));
+        });
+        // openclaw research delete <id>
+        const deleteCmd = cmd.command("delete <id>");
+        deleteCmd.description("Delete a research project (agent + workspace + cron)");
+        deleteCmd.action((id) => {
+            deleteProject(String(id));
+        });
+    }, { commands: ["research"] });
+}
+//# sourceMappingURL=research.js.map

package/dist/src/cli/research.js.map

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package/dist/src/commands/metabolism-status.d.ts

@@ -0,0 +1,6 @@
+import type { PluginCommandContext, PluginCommandResult } from "openclaw";
+/**
+ * /metabolism-status — Show knowledge metabolism status
+ */
+export declare function handleMetabolismStatus(_ctx: PluginCommandContext): PluginCommandResult;
+//# sourceMappingURL=metabolism-status.d.ts.map

package/dist/src/commands/metabolism-status.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"metabolism-status.d.ts","sourceRoot":"","sources":["../../../src/commands/metabolism-status.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,oBAAoB,EAAE,mBAAmB,EAAE,MAAM,UAAU,CAAC;AA6E1E;;GAEG;AACH,wBAAgB,sBAAsB,CAAC,IAAI,EAAE,oBAAoB,GAAG,mBAAmB,CA0CtF"}