react-msaview 5.1.1 → 5.2.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (190) hide show
  1. package/README.md +41 -8
  2. package/bundle/index.js +17 -17
  3. package/bundle/index.js.LICENSE.txt +1 -1
  4. package/bundle/index.js.map +1 -1
  5. package/dist/calculateBlocks.d.ts +4 -10
  6. package/dist/calculateBlocks.js +12 -20
  7. package/dist/calculateBlocks.js.map +1 -1
  8. package/dist/components/ConservationTrack.js +20 -37
  9. package/dist/components/ConservationTrack.js.map +1 -1
  10. package/dist/components/MSAView.js +8 -1
  11. package/dist/components/MSAView.js.map +1 -1
  12. package/dist/components/ResizeHandles.d.ts +3 -0
  13. package/dist/components/ResizeHandles.js +60 -105
  14. package/dist/components/ResizeHandles.js.map +1 -1
  15. package/dist/components/TextTrack.js +25 -34
  16. package/dist/components/TextTrack.js.map +1 -1
  17. package/dist/components/Track.js +1 -1
  18. package/dist/components/Track.js.map +1 -1
  19. package/dist/components/VerticalScrollbar.js +2 -2
  20. package/dist/components/VerticalScrollbar.js.map +1 -1
  21. package/dist/components/dialogs/ExportSVGDialog.js +20 -20
  22. package/dist/components/dialogs/ExportSVGDialog.js.map +1 -1
  23. package/dist/components/dialogs/InterProScanDialog.js +6 -1
  24. package/dist/components/dialogs/InterProScanDialog.js.map +1 -1
  25. package/dist/components/dialogs/UserProvidedDomainsDialog.js +1 -2
  26. package/dist/components/dialogs/UserProvidedDomainsDialog.js.map +1 -1
  27. package/dist/components/header/ColorSchemeMenu.js +1 -1
  28. package/dist/components/header/ColorSchemeMenu.js.map +1 -1
  29. package/dist/components/header/FileMenu.js +3 -2
  30. package/dist/components/header/FileMenu.js.map +1 -1
  31. package/dist/components/header/Header.js +1 -1
  32. package/dist/components/header/HeaderInfoArea.js +28 -8
  33. package/dist/components/header/HeaderInfoArea.js.map +1 -1
  34. package/dist/components/header/MSASettingsMenu.js +1 -1
  35. package/dist/components/header/MSASettingsMenu.js.map +1 -1
  36. package/dist/components/header/TreeSettingsMenu.js +1 -1
  37. package/dist/components/header/TreeSettingsMenu.js.map +1 -1
  38. package/dist/components/header/ZoomControls.js +7 -2
  39. package/dist/components/header/ZoomControls.js.map +1 -1
  40. package/dist/components/header/ZoomMenu.js +9 -0
  41. package/dist/components/header/ZoomMenu.js.map +1 -1
  42. package/dist/components/header/settingsMenuItems.js +24 -8
  43. package/dist/components/header/settingsMenuItems.js.map +1 -1
  44. package/dist/components/minimap/Minimap.js +6 -17
  45. package/dist/components/minimap/Minimap.js.map +1 -1
  46. package/dist/components/minimap/MinimapSVG.js +7 -17
  47. package/dist/components/minimap/MinimapSVG.js.map +1 -1
  48. package/dist/components/minimap/minimapLayout.d.ts +9 -0
  49. package/dist/components/minimap/minimapLayout.js +15 -0
  50. package/dist/components/minimap/minimapLayout.js.map +1 -0
  51. package/dist/components/msa/MSACanvas.js +6 -1
  52. package/dist/components/msa/MSACanvas.js.map +1 -1
  53. package/dist/components/msa/MSACanvasBlock.js +5 -1
  54. package/dist/components/msa/MSACanvasBlock.js.map +1 -1
  55. package/dist/components/msa/MSAMouseoverCanvas.js +2 -2
  56. package/dist/components/msa/MSAMouseoverCanvas.js.map +1 -1
  57. package/dist/components/msa/getVisibleLeaves.d.ts +6 -0
  58. package/dist/components/msa/getVisibleLeaves.js +9 -0
  59. package/dist/components/msa/getVisibleLeaves.js.map +1 -0
  60. package/dist/components/msa/renderBoxFeatureCanvasBlock.d.ts +2 -1
  61. package/dist/components/msa/renderBoxFeatureCanvasBlock.js +5 -6
  62. package/dist/components/msa/renderBoxFeatureCanvasBlock.js.map +1 -1
  63. package/dist/components/msa/renderMSABlock.d.ts +2 -1
  64. package/dist/components/msa/renderMSABlock.js +100 -88
  65. package/dist/components/msa/renderMSABlock.js.map +1 -1
  66. package/dist/components/msa/renderMSAMouseover.js +5 -4
  67. package/dist/components/msa/renderMSAMouseover.js.map +1 -1
  68. package/dist/components/msa/visibleColRange.d.ts +8 -0
  69. package/dist/components/msa/visibleColRange.js +10 -0
  70. package/dist/components/msa/visibleColRange.js.map +1 -0
  71. package/dist/components/renderCtx.d.ts +7 -0
  72. package/dist/components/renderCtx.js +2 -0
  73. package/dist/components/renderCtx.js.map +1 -0
  74. package/dist/components/tracks/renderTracksSvg.d.ts +6 -5
  75. package/dist/components/tracks/renderTracksSvg.js +13 -5
  76. package/dist/components/tracks/renderTracksSvg.js.map +1 -1
  77. package/dist/components/tree/TreeCanvas.js.map +1 -1
  78. package/dist/components/tree/TreeCanvasBlock.js +2 -10
  79. package/dist/components/tree/TreeCanvasBlock.js.map +1 -1
  80. package/dist/components/tree/renderTreeCanvas.d.ts +5 -4
  81. package/dist/components/tree/renderTreeCanvas.js +18 -26
  82. package/dist/components/tree/renderTreeCanvas.js.map +1 -1
  83. package/dist/components/util.d.ts +0 -14
  84. package/dist/components/util.js +0 -58
  85. package/dist/components/util.js.map +1 -1
  86. package/dist/constants.d.ts +4 -0
  87. package/dist/constants.js +7 -0
  88. package/dist/constants.js.map +1 -1
  89. package/dist/flatToTree.js +6 -0
  90. package/dist/flatToTree.js.map +1 -1
  91. package/dist/hierarchy.d.ts +3 -1
  92. package/dist/hierarchy.js +142 -89
  93. package/dist/hierarchy.js.map +1 -1
  94. package/dist/index.d.ts +1 -0
  95. package/dist/index.js +8 -0
  96. package/dist/index.js.map +1 -1
  97. package/dist/launchInterProScan.js +22 -9
  98. package/dist/launchInterProScan.js.map +1 -1
  99. package/dist/measureTextCanvas.js +2 -1
  100. package/dist/measureTextCanvas.js.map +1 -1
  101. package/dist/model.d.ts +234 -176
  102. package/dist/model.js +285 -259
  103. package/dist/model.js.map +1 -1
  104. package/dist/parseAsn1.js +8 -2
  105. package/dist/parseAsn1.js.map +1 -1
  106. package/dist/renderToSvg.d.ts +1 -1
  107. package/dist/renderToSvg.js +43 -46
  108. package/dist/renderToSvg.js.map +1 -1
  109. package/dist/rowCoordinateCalculations.d.ts +0 -9
  110. package/dist/rowCoordinateCalculations.js +0 -20
  111. package/dist/rowCoordinateCalculations.js.map +1 -1
  112. package/dist/setFontSize.d.ts +3 -0
  113. package/dist/setFontSize.js +14 -0
  114. package/dist/setFontSize.js.map +1 -0
  115. package/dist/useDevicePixelRatio.d.ts +1 -0
  116. package/dist/useDevicePixelRatio.js +27 -0
  117. package/dist/useDevicePixelRatio.js.map +1 -0
  118. package/dist/useWheelScroll.d.ts +3 -1
  119. package/dist/useWheelScroll.js +64 -22
  120. package/dist/useWheelScroll.js.map +1 -1
  121. package/dist/util.d.ts +5 -0
  122. package/dist/util.js +59 -1
  123. package/dist/util.js.map +1 -1
  124. package/dist/version.d.ts +1 -1
  125. package/dist/version.js +1 -1
  126. package/dist/webpack.js +0 -1
  127. package/dist/webpack.js.map +1 -1
  128. package/dist/wheelZoom.d.ts +4 -0
  129. package/dist/wheelZoom.js +43 -0
  130. package/dist/wheelZoom.js.map +1 -0
  131. package/package.json +5 -5
  132. package/src/calculateBlocks.ts +18 -51
  133. package/src/components/ConservationTrack.tsx +20 -45
  134. package/src/components/MSAView.tsx +10 -1
  135. package/src/components/ResizeHandles.tsx +101 -113
  136. package/src/components/TextTrack.tsx +31 -38
  137. package/src/components/Track.tsx +1 -1
  138. package/src/components/VerticalScrollbar.tsx +2 -2
  139. package/src/components/dialogs/ExportSVGDialog.tsx +27 -17
  140. package/src/components/dialogs/InterProScanDialog.tsx +6 -1
  141. package/src/components/dialogs/UserProvidedDomainsDialog.tsx +1 -2
  142. package/src/components/header/ColorSchemeMenu.tsx +1 -0
  143. package/src/components/header/FileMenu.tsx +3 -1
  144. package/src/components/header/Header.tsx +1 -1
  145. package/src/components/header/HeaderInfoArea.tsx +32 -7
  146. package/src/components/header/MSASettingsMenu.tsx +1 -0
  147. package/src/components/header/TreeSettingsMenu.tsx +1 -0
  148. package/src/components/header/ZoomControls.tsx +14 -1
  149. package/src/components/header/ZoomMenu.tsx +10 -0
  150. package/src/components/header/settingsMenuItems.ts +24 -8
  151. package/src/components/minimap/Minimap.tsx +6 -20
  152. package/src/components/minimap/MinimapSVG.tsx +10 -27
  153. package/src/components/minimap/minimapLayout.ts +17 -0
  154. package/src/components/msa/MSACanvas.tsx +9 -0
  155. package/src/components/msa/MSACanvasBlock.tsx +7 -1
  156. package/src/components/msa/MSAMouseoverCanvas.tsx +4 -3
  157. package/src/components/msa/getVisibleLeaves.ts +21 -0
  158. package/src/components/msa/renderBoxFeatureCanvasBlock.ts +9 -9
  159. package/src/components/msa/renderMSABlock.ts +123 -125
  160. package/src/components/msa/renderMSAMouseover.ts +5 -4
  161. package/src/components/msa/visibleColRange.ts +17 -0
  162. package/src/components/renderCtx.ts +29 -0
  163. package/src/components/tracks/renderTracksSvg.ts +20 -10
  164. package/src/components/tree/TreeCanvas.tsx +3 -1
  165. package/src/components/tree/TreeCanvasBlock.tsx +2 -12
  166. package/src/components/tree/renderTreeCanvas.ts +27 -30
  167. package/src/components/util.ts +0 -81
  168. package/src/constants.ts +8 -0
  169. package/src/flatToTree.test.ts +30 -0
  170. package/src/flatToTree.ts +10 -1
  171. package/src/hierarchy.test.ts +53 -1
  172. package/src/hierarchy.ts +153 -100
  173. package/src/index.ts +8 -0
  174. package/src/launchInterProScan.ts +33 -11
  175. package/src/measureTextCanvas.ts +3 -1
  176. package/src/model.ts +359 -306
  177. package/src/parseAsn1.test.ts +6 -0
  178. package/src/parseAsn1.ts +11 -3
  179. package/src/renderToSvg.tsx +99 -95
  180. package/src/rowCoordinateCalculations.test.ts +0 -51
  181. package/src/rowCoordinateCalculations.ts +0 -23
  182. package/src/setFontSize.test.ts +33 -0
  183. package/src/setFontSize.ts +20 -0
  184. package/src/useDevicePixelRatio.ts +29 -0
  185. package/src/useWheelScroll.ts +79 -21
  186. package/src/util.ts +60 -1
  187. package/src/version.ts +1 -1
  188. package/src/webpack.ts +0 -1
  189. package/src/wheelZoom.test.ts +46 -0
  190. package/src/wheelZoom.ts +47 -0

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